View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5214_high_5 (Length: 242)
Name: NF5214_high_5
Description: NF5214
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5214_high_5 |
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Alignment Details
Target: chr7 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 30652216 - 30652441
Alignment:
| Q |
1 |
tttttcttaatatgtgtatgccattgggttcttatcaatgggttgatattgatgtaatggtacttttcctttttccgttgatacttaatttgcaggagtt |
100 |
Q |
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| T |
30652216 |
tttttcttaatatgtgtatgccattgggttcttatcaatgggttgatattgatgtaacggtacttttcctttttccgttgatacttaatttgcaggagtt |
30652315 |
T |
|
| Q |
101 |
atatggaaaggggacagcttgatagaaggagtgcctgaaacacttgacatgcttagatcaaaggtttgtgtactaatgtaggaactaggcctgcaagcgt |
200 |
Q |
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||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30652316 |
atatggaaaggtgacagcttgatagaaggagtgcctgaaacacttgacatgcttagatcaaaggtttgtgtactaatgtaggaactaggcctgcaagcgt |
30652415 |
T |
|
| Q |
201 |
ggatgttaactatagtattcgatctg |
226 |
Q |
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||||||||||||||||||| |||||| |
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| T |
30652416 |
ggatgttaactatagtatttgatctg |
30652441 |
T |
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