View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5214_low_2 (Length: 452)
Name: NF5214_low_2
Description: NF5214
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5214_low_2 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 432; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 432; E-Value: 0
Query Start/End: Original strand, 1 - 452
Target Start/End: Original strand, 30651707 - 30652158
Alignment:
| Q |
1 |
gaatgatgattatgttttttctaggactatgagaaaagtgtatgtgtgtcagtaatcttattaatttttcttttatatgaaaatgttaataagttagtgg |
100 |
Q |
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| T |
30651707 |
gaatgatgattatgttttttctaggactatgagaaaagtgtatgtgtgtcagtaatcttattaatttttcttttatatgaaaatgttaataagttagtgg |
30651806 |
T |
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| Q |
101 |
ttatgttattttccagagttggaatatggacatcatgcttaaaatggtttcagtgtcatcaactgagttatttgtttgatgatatgtatatcctgttatt |
200 |
Q |
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| T |
30651807 |
ttatgttattttccagagttggaatatggacatcatgcttaaaatggtttcagtgtcatcaactgagttatttgtttgatgatatgtatatcctgttatt |
30651906 |
T |
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| Q |
201 |
tttgctaggatctaaagcattttcatgtgagttcttttctatatattattagtttaaggatcaaattatgtgtttttatggttaatgttgtttgaaatta |
300 |
Q |
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| T |
30651907 |
tttgctaggatctaaatcatttacatgtgagttcttttctatatatcattagtttaaggatcaaattatgtgtttttatggttaatgttgtttgaaatta |
30652006 |
T |
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| Q |
301 |
taaacattgatttgctttacactttgtgacaacttccagctggtgttacaaggggatcatgtcatatttgatagacaccatatgaacttgactgaactac |
400 |
Q |
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| T |
30652007 |
taaacattgatttgctttacactttgtgacaacttccagctggtgttacaaggggatcatgtcatatttgatagacaccatatgaacttgactgaactac |
30652106 |
T |
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| Q |
401 |
acattttttctttcttttaattaaacgatgtctttgtcccccgtgtattgat |
452 |
Q |
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| T |
30652107 |
acattttttctttcttttagttaaacgatgtctttgtcccccatgtattgat |
30652158 |
T |
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