View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5215-Insertion-8 (Length: 207)

Name: NF5215-Insertion-8
Description: NF5215
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5215-Insertion-8
NF5215-Insertion-8
[»] chr1 (30 HSPs)
chr1 (92-204)||(9474865-9474977)
chr1 (93-203)||(3000319-3000429)
chr1 (93-204)||(2581915-2582026)
chr1 (93-203)||(38595154-38595264)
chr1 (93-204)||(41758805-41758916)
chr1 (90-204)||(27564724-27564838)
chr1 (91-204)||(47452309-47452422)
chr1 (92-200)||(48716275-48716383)
chr1 (93-204)||(8346377-8346488)
chr1 (93-204)||(38632310-38632421)
chr1 (93-204)||(50630458-50630569)
chr1 (93-204)||(32813247-32813358)
chr1 (96-203)||(44548366-44548473)
chr1 (93-204)||(51898672-51898783)
chr1 (93-204)||(43132-43243)
chr1 (91-204)||(37649196-37649309)
chr1 (113-202)||(45044551-45044640)
chr1 (93-204)||(23597080-23597191)
chr1 (123-200)||(13414791-13414868)
chr1 (92-197)||(50590996-50591101)
chr1 (92-197)||(41608489-41608594)
chr1 (93-197)||(5958996-5959100)
chr1 (91-203)||(26440732-26440844)
chr1 (96-203)||(26274435-26274542)
chr1 (94-204)||(11152367-11152476)
chr1 (93-202)||(37926429-37926538)
chr1 (93-204)||(49811516-49811627)
chr1 (91-177)||(6260868-6260954)
chr1 (91-197)||(47748441-47748546)
chr1 (89-193)||(3302533-3302637)
[»] chr4 (33 HSPs)
chr4 (93-204)||(24995096-24995207)
chr4 (92-202)||(11511453-11511563)
chr4 (92-204)||(6034043-6034155)
chr4 (93-204)||(480436-480547)
chr4 (93-204)||(48183038-48183149)
chr4 (93-204)||(29234234-29234345)
chr4 (93-204)||(41236347-41236458)
chr4 (93-204)||(50052417-50052528)
chr4 (93-204)||(42044356-42044467)
chr4 (92-204)||(54473522-54473634)
chr4 (93-204)||(29239886-29239997)
chr4 (91-197)||(3481652-3481758)
chr4 (93-204)||(23608235-23608346)
chr4 (92-203)||(31910191-31910302)
chr4 (92-204)||(50526160-50526272)
chr4 (91-204)||(40574777-40574890)
chr4 (131-203)||(41823920-41823992)
chr4 (98-204)||(53352555-53352660)
chr4 (93-197)||(19670712-19670816)
chr4 (111-197)||(17983739-17983825)
chr4 (93-197)||(29977885-29977989)
chr4 (93-197)||(47986208-47986312)
chr4 (93-197)||(50813888-50813992)
chr4 (93-161)||(55475191-55475259)
chr4 (113-204)||(48647715-48647806)
chr4 (137-194)||(28480267-28480324)
chr4 (137-194)||(28481142-28481199)
chr4 (137-194)||(28482017-28482074)
chr4 (93-197)||(8343159-8343263)
chr4 (93-197)||(32766958-32767062)
chr4 (93-197)||(47104544-47104648)
chr4 (93-161)||(29547991-29548059)
chr4 (109-197)||(29589736-29589823)
[»] chr3 (33 HSPs)
chr3 (90-204)||(53982008-53982122)
chr3 (98-203)||(52629305-52629410)
chr3 (92-204)||(33644199-33644311)
chr3 (93-204)||(49607414-49607525)
chr3 (93-203)||(54868885-54868995)
chr3 (93-202)||(11095346-11095453)
chr3 (94-204)||(31456690-31456800)
chr3 (93-204)||(8076393-8076504)
chr3 (93-204)||(24699943-24700054)
chr3 (93-204)||(33118840-33118951)
chr3 (93-203)||(17470405-17470515)
chr3 (97-203)||(48587081-48587187)
chr3 (93-202)||(27714882-27714991)
chr3 (89-204)||(26141521-26141636)
chr3 (93-204)||(9562999-9563110)
chr3 (93-204)||(41189753-41189864)
chr3 (93-197)||(14623835-14623939)
chr3 (98-204)||(26754700-26754806)
chr3 (92-203)||(20764905-20765016)
chr3 (92-203)||(30801723-30801834)
chr3 (93-204)||(51419349-51419460)
chr3 (93-204)||(36707417-36707524)
chr3 (93-174)||(35536626-35536707)
chr3 (93-204)||(11347911-11348022)
chr3 (93-204)||(11907371-11907482)
chr3 (94-197)||(13898051-13898154)
chr3 (93-204)||(47531865-47531976)
chr3 (93-175)||(41080709-41080790)
chr3 (93-158)||(8956762-8956827)
chr3 (92-161)||(45058585-45058653)
chr3 (124-197)||(42823142-42823215)
chr3 (122-197)||(36331325-36331400)
chr3 (93-161)||(36331410-36331478)
[»] chr2 (32 HSPs)
chr2 (93-203)||(30915463-30915573)
chr2 (93-204)||(17473020-17473131)
chr2 (93-204)||(9058480-9058591)
chr2 (93-203)||(7465725-7465835)
chr2 (93-202)||(5574479-5574588)
chr2 (91-204)||(13438341-13438454)
chr2 (91-204)||(19930809-19930922)
chr2 (96-204)||(28863458-28863566)
chr2 (93-204)||(10249371-10249482)
chr2 (92-203)||(40701477-40701588)
chr2 (93-203)||(33436090-33436200)
chr2 (93-204)||(32505637-32505748)
chr2 (89-203)||(28381645-28381759)
chr2 (91-204)||(40613891-40614004)
chr2 (91-197)||(27864702-27864808)
chr2 (93-204)||(20700815-20700926)
chr2 (93-204)||(38273131-38273242)
chr2 (92-203)||(4060684-4060795)
chr2 (93-204)||(42257193-42257304)
chr2 (93-202)||(38882802-38882913)
chr2 (93-202)||(26891495-26891604)
chr2 (94-197)||(41575138-41575242)
chr2 (93-204)||(36168836-36168947)
chr2 (92-197)||(17820000-17820105)
chr2 (93-158)||(33436211-33436276)
chr2 (111-197)||(2997483-2997569)
chr2 (91-197)||(43490119-43490225)
chr2 (99-204)||(3439985-3440090)
chr2 (109-197)||(13365369-13365457)
chr2 (93-197)||(38732354-38732458)
chr2 (93-204)||(2533124-2533234)
chr2 (93-197)||(45097731-45097835)
[»] chr8 (30 HSPs)
chr8 (89-204)||(34012285-34012400)
chr8 (91-204)||(15197331-15197444)
chr8 (93-204)||(12831047-12831158)
chr8 (91-203)||(504111-504223)
chr8 (93-204)||(14547922-14548033)
chr8 (90-204)||(23122586-23122700)
chr8 (92-204)||(40423932-40424044)
chr8 (93-203)||(44507077-44507187)
chr8 (93-204)||(1179929-1180040)
chr8 (94-204)||(5957831-5957941)
chr8 (93-197)||(10284627-10284731)
chr8 (93-204)||(37038479-37038590)
chr8 (91-204)||(43414570-43414683)
chr8 (93-204)||(4854852-4854963)
chr8 (112-204)||(8841421-8841513)
chr8 (98-204)||(10621076-10621182)
chr8 (92-198)||(15048177-15048282)
chr8 (137-204)||(9122229-9122296)
chr8 (93-204)||(15258918-15259029)
chr8 (89-158)||(20074969-20075038)
chr8 (93-197)||(16383377-16383481)
chr8 (93-176)||(14055609-14055692)
chr8 (93-161)||(30479506-30479574)
chr8 (93-197)||(34307216-34307320)
chr8 (93-197)||(17443825-17443929)
chr8 (93-197)||(24307789-24307893)
chr8 (93-197)||(42221515-42221619)
chr8 (135-202)||(38229470-38229537)
chr8 (123-197)||(16056397-16056471)
chr8 (93-161)||(24307629-24307697)
[»] chr7 (32 HSPs)
chr7 (93-204)||(8080372-8080483)
chr7 (91-204)||(35137531-35137644)
chr7 (93-204)||(4999503-4999614)
chr7 (93-204)||(7389389-7389500)
chr7 (92-204)||(38267039-38267151)
chr7 (91-204)||(19329840-19329953)
chr7 (93-202)||(36361904-36362013)
chr7 (93-204)||(38837217-38837328)
chr7 (93-203)||(3434562-3434672)
chr7 (93-203)||(40957707-40957817)
chr7 (93-202)||(36362026-36362135)
chr7 (96-204)||(3783998-3784106)
chr7 (94-204)||(32951482-32951592)
chr7 (93-202)||(19436178-19436287)
chr7 (91-197)||(8238210-8238317)
chr7 (91-204)||(3694365-3694478)
chr7 (93-197)||(35468851-35468955)
chr7 (91-196)||(21234399-21234504)
chr7 (93-197)||(38044197-38044301)
chr7 (93-204)||(36208173-36208284)
chr7 (93-197)||(22343361-22343465)
chr7 (93-197)||(40846109-40846213)
chr7 (93-197)||(41915741-41915845)
chr7 (93-204)||(46033790-46033901)
chr7 (92-197)||(32564422-32564527)
chr7 (98-203)||(35522881-35522986)
chr7 (93-203)||(11044188-11044288)
chr7 (93-193)||(7727906-7728006)
chr7 (93-204)||(26296644-26296755)
chr7 (98-175)||(2318261-2318338)
chr7 (93-158)||(10343598-10343663)
chr7 (93-197)||(18207180-18207283)
[»] chr6 (18 HSPs)
chr6 (89-204)||(32869674-32869789)
chr6 (96-204)||(22880647-22880755)
chr6 (91-204)||(17598552-17598665)
chr6 (93-204)||(11427616-11427729)
chr6 (93-204)||(6209454-6209565)
chr6 (93-202)||(29857827-29857936)
chr6 (92-204)||(31109389-31109501)
chr6 (91-197)||(31953026-31953132)
chr6 (93-204)||(31976248-31976359)
chr6 (124-204)||(23128116-23128196)
chr6 (93-204)||(15832577-15832688)
chr6 (92-197)||(15508020-15508125)
chr6 (93-197)||(15990038-15990142)
chr6 (93-197)||(30341356-30341460)
chr6 (93-202)||(31110752-31110859)
chr6 (97-198)||(28536483-28536582)
chr6 (98-197)||(9379708-9379807)
chr6 (94-204)||(946377-946487)
[»] chr5 (27 HSPs)
chr5 (89-204)||(33149627-33149742)
chr5 (93-204)||(36732931-36733042)
chr5 (90-204)||(40145404-40145518)
chr5 (96-204)||(18520873-18520981)
chr5 (93-204)||(2740274-2740385)
chr5 (91-204)||(14831812-14831925)
chr5 (91-204)||(28177773-28177886)
chr5 (92-203)||(35785198-35785309)
chr5 (93-204)||(13811652-13811763)
chr5 (91-200)||(42414295-42414404)
chr5 (93-204)||(6679698-6679809)
chr5 (8-80)||(8338734-8338812)
chr5 (93-204)||(35943881-35943992)
chr5 (93-204)||(15409599-15409710)
chr5 (92-202)||(26720515-26720625)
chr5 (92-202)||(26990264-26990374)
chr5 (94-204)||(36875601-36875702)
chr5 (93-197)||(3921261-3921365)
chr5 (93-197)||(2252164-2252268)
chr5 (137-203)||(21370048-21370114)
chr5 (93-204)||(20073505-20073616)
chr5 (141-203)||(31132392-31132454)
chr5 (137-202)||(31009032-31009097)
chr5 (93-182)||(41470427-41470516)
chr5 (93-158)||(33825359-33825424)
chr5 (124-204)||(39557506-39557586)
chr5 (93-197)||(39688893-39688997)
[»] scaffold0321 (1 HSPs)
scaffold0321 (93-204)||(10098-10209)
[»] scaffold0237 (1 HSPs)
scaffold0237 (93-202)||(4029-4138)
[»] scaffold1268 (1 HSPs)
scaffold1268 (91-204)||(918-1031)
[»] scaffold1267 (1 HSPs)
scaffold1267 (91-204)||(918-1031)
[»] scaffold0018 (1 HSPs)
scaffold0018 (109-197)||(152514-152602)


Alignment Details
Target: chr1 (Bit Score: 85; Significance: 1e-40; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 92 - 204
Target Start/End: Complemental strand, 9474977 - 9474865
Alignment:
Q  92 tgagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacacttt 191  Q
    ||||||||||||||| ||||||||||| | |||||||||||||||||||||||| |||||| ||||| |||||||||||||||||| |||||||||||||    
T  9474977 tgagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaaacacacttt 9474878  T
Q  192 ctcttttctctcc 204  Q
    |||||||||||||    
T  9474877 ctcttttctctcc 9474865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 93 - 203
Target Start/End: Original strand, 3000319 - 3000429
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    ||||||||||||||  |||||||||| | |||||||||||||||||||||||| |||||| ||||| ||||||||||||||||||||||| |||||||||    
T  3000319 gagtaatgatacataaacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttc 3000418  T
Q  193 tcttttctctc 203  Q
    |||||||||||    
T  3000419 tcttttctctc 3000429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 93 - 204
Target Start/End: Original strand, 2581915 - 2582026
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||||||||||||| ||||||||||| | |||||||||||||||||||||||| |||||| ||||| |||||||||||||||||| |||| |||||||||    
T  2581915 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 2582014  T
Q  193 tcttttctctcc 204  Q
    | ||||||||||    
T  2582015 ttttttctctcc 2582026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 93 - 203
Target Start/End: Original strand, 38595154 - 38595264
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    ||||||||||||||  ||||| |||| | |||||||||||||||||||||||| |||||| ||||| ||||||||||||||||||||||| |||||||||    
T  38595154 gagtaatgatacataaacacctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttc 38595253  T
Q  193 tcttttctctc 203  Q
    |||||||||||    
T  38595254 tcttttctctc 38595264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 93 - 204
Target Start/End: Original strand, 41758805 - 41758916
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||||||||||||| |||||| ||| || |||||||||||||||||| ||||| |||||| ||||| |||||||| ||||||||| ||||||||||||||    
T  41758805 gagtaatgatacatagacaccattaaatggcaatacaccctttgacaaccacacaaaaatctgacacgtagtcacatggaccccgcacaaacacactttc 41758904  T
Q  193 tcttttctctcc 204  Q
    ||||||||||||    
T  41758905 tcttttctctcc 41758916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 90 - 204
Target Start/End: Complemental strand, 27564838 - 27564724
Alignment:
Q  90 tatgagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacact 189  Q
    ||||||||||||||||| |||| |||||| | |||||||||| ||||||||||||| |||||| ||||| ||| |||||||||||||| |||| ||||||    
T  27564838 tatgagtaatgatacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcacact 27564739  T
Q  190 ttctcttttctctcc 204  Q
    |||||||||||||||    
T  27564738 ttctcttttctctcc 27564724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 91 - 204
Target Start/End: Complemental strand, 47452422 - 47452309
Alignment:
Q  91 atgagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactt 190  Q
    |||||||||||||||| ||||||||||| | | |||||||||||||||||||||| |||||| | ||| ||||||||||||| |||| |||| |||||||    
T  47452422 atgagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggatcccgcacaagcacactt 47452323  T
Q  191 tctcttttctctcc 204  Q
    ||||||||||||||    
T  47452322 tctcttttctctcc 47452309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 92 - 200
Target Start/End: Complemental strand, 48716383 - 48716275
Alignment:
Q  92 tgagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacacttt 191  Q
    ||||||||||||||| ||||||||||| | |||||||||| ||||||| ||||| |||||| ||||| |||||||||||||||||| |||| ||||||||    
T  48716383 tgagtaatgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 48716284  T
Q  192 ctcttttct 200  Q
     ||||||||    
T  48716283 atcttttct 48716275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 93 - 204
Target Start/End: Complemental strand, 8346488 - 8346377
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||||||||||||| | |||| |||| | |||||||||| ||||||||||||| |||||| ||||| |||||||||||||||| | |||| |||||||||    
T  8346488 gagtaatgatacatagtcacctttaggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccctgcacaagcacactttc 8346389  T
Q  193 tcttttctctcc 204  Q
    ||||||||||||    
T  8346388 tcttttctctcc 8346377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 93 - 204
Target Start/End: Complemental strand, 38632421 - 38632310
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||||||||||||| ||||||||||| | |||||||||| ||| ||| ||||| |||||| ||||| |||||||||||||||||| |||| ||||||||     
T  38632421 gagtaatgatacatagacacccttaggtggcaatacaccttttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttt 38632322  T
Q  193 tcttttctctcc 204  Q
    ||||||||||||    
T  38632321 tcttttctctcc 38632310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 93 - 204
Target Start/End: Original strand, 50630458 - 50630569
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||||||||||||| || |||||||| | |||||||| ||||||  ||||||| |||||| ||||| |||||||||||||||||| |||| |||||||||    
T  50630458 gagtaatgatacatagatacccttaggtggcaatacatcctttgttacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 50630557  T
Q  193 tcttttctctcc 204  Q
    ||||||||||||    
T  50630558 tcttttctctcc 50630569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 93 - 204
Target Start/End: Original strand, 32813247 - 32813358
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||| ||||||||| |||| |||||| | |||||||||||||| ||||||||| |||||| ||||| || ||||| ||||||||| |||| |||||||||    
T  32813247 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccgcacaagcacactttc 32813346  T
Q  193 tcttttctctcc 204  Q
    ||||||||||||    
T  32813347 tcttttctctcc 32813358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 96 - 203
Target Start/End: Complemental strand, 44548473 - 44548366
Alignment:
Q  96 taatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttctct 195  Q
    ||||||||||| |||| | |||| | |||||||||| ||||| ||||||| |||||| ||||| |||||||||||||||||| |||| ||||||||||||    
T  44548473 taatgatacatagacatctttaggtggcaatacaccatttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 44548374  T
Q  196 tttctctc 203  Q
    ||||||||    
T  44548373 tttctctc 44548366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 93 - 204
Target Start/End: Complemental strand, 51898783 - 51898672
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||||||||||||| |||| | |||| | |||||||||||||||||||||||| |||||| ||||| ||||||||||||| |||| |||| |||||||||    
T  51898783 gagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 51898684  T
Q  193 tcttttctctcc 204  Q
    | ||| ||||||    
T  51898683 tatttcctctcc 51898672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 93 - 204
Target Start/End: Original strand, 43132 - 43243
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||||||||||||| ||||  |||||    ||||||| ||||||||||||||| |||||| ||||| |||||||||||||| ||| |||| |||||||||    
T  43132 gagtaatgatacatagacagtcttaggagacaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggactccgcacaagcacactttc 43231  T
Q  193 tcttttctctcc 204  Q
    ||||||||||||    
T  43232 tcttttctctcc 43243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 91 - 204
Target Start/End: Original strand, 37649196 - 37649309
Alignment:
Q  91 atgagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactt 190  Q
    |||||||||||||||| |||| | |||| | ||||||||| |||||||||||||| |||||| ||||| || |||||||| |  ||| |||| |||||||    
T  37649196 atgagtaatgatacatagacatctttaggtggcaatacactctttgacacccacacaaaaatctgacacgtggtcacgtgaattccgcacaagcacactt 37649295  T
Q  191 tctcttttctctcc 204  Q
    || |||||||||||    
T  37649296 tcccttttctctcc 37649309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 113 - 202
Target Start/End: Complemental strand, 45044640 - 45044551
Alignment:
Q  113 ccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttctcttttctct 202  Q
    |||||| | |||||||||| ||||||||||| | |||||| |||||||||| ||| ||||||||| ||||||||| ||||||||||||||    
T  45044640 ccttaggtggcaatacaccatttgacacccatacaaaaatctgacatgtagccacatggaccccgcacaaacacattttctcttttctct 45044551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 93 - 204
Target Start/End: Complemental strand, 23597191 - 23597080
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||||||||||||| |||| | |||| | ||||||||| |||||| |||||||||||||| ||||| || | ||||| ||||  | |||||||||||||     
T  23597191 gagtaatgatacatagacatcattaggtggcaatacactctttgatacccacataaaaatctgacacgtggccacgttgaccttgcacaaacacacttta 23597092  T
Q  193 tcttttctctcc 204  Q
    ||||||||||||    
T  23597091 tcttttctctcc 23597080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 123 - 200
Target Start/End: Original strand, 13414791 - 13414868
Alignment:
Q  123 caatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttctcttttct 200  Q
    ||||||||||||||||||||||| |||||| | ||| |||||||||||||||||  |||| |||| ||||||||||||    
T  13414791 caatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccacacaagcacattttctcttttct 13414868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 92 - 197
Target Start/End: Complemental strand, 50591101 - 50590996
Alignment:
Q  92 tgagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacacttt 191  Q
    ||||| |||||||||  |||||||||| | ||||||||||| |||||||||||| |||||| |||||||| | ||  ||||||||| ||||  |||||||    
T  50591101 tgagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 50591002  T
Q  192 ctcttt 197  Q
    ||||||    
T  50591001 ctcttt 50590996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 92 - 197
Target Start/End: Complemental strand, 41608594 - 41608489
Alignment:
Q  92 tgagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacacttt 191  Q
    ||||| |||||||||  ||| |||||| | ||||||||||| ||||||| |||| |||||| |||||||| | ||  ||||||||||||||  |||||||    
T  41608594 tgagttatgatacataaacatccttaggtggcaatacaccccttgacactcacacaaaaatctgacatgtggccatatggaccccgtacaagtacacttt 41608495  T
Q  192 ctcttt 197  Q
    ||||||    
T  41608494 ctcttt 41608489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 93 - 197
Target Start/End: Complemental strand, 5959100 - 5958996
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||| |||||||||  |||||||||  | ||||||||||  |||||||||||| |||||| |||||||| ||||  ||||||||| ||||  ||||||||    
T  5959100 gagttatgatacataaacacccttaagtggcaatacacctcttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaagtacactttc 5959001  T
Q  193 tcttt 197  Q
    |||||    
T  5959000 tcttt 5958996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 203
Target Start/End: Original strand, 26440732 - 26440844
Alignment:
Q  91 atgagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactt 190  Q
    |||||| | |||| || |||| ||||||||  ||||||||||||| ||||||||| |||||| ||||| || | ||| |||| |||| | || |||||||    
T  26440732 atgagttaggatagatagacatccttagatgacaatacaccctttaacacccacacaaaaatctgacacgtggccacatggatcccgcataagcacactt 26440831  T
Q  191 tctcttttctctc 203  Q
    |||||||||||||    
T  26440832 tctcttttctctc 26440844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 96 - 203
Target Start/End: Original strand, 26274435 - 26274542
Alignment:
Q  96 taatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttctct 195  Q
    ||||||||||| ||||||||||  | |||||||| | ||||||| ||||| |||||| |||||  |||||||||||| || | ||||  ||||||| |||    
T  26274435 taatgatacatagacacccttatgtggcaatacatcatttgacatccacagaaaaatctgacacatagtcacgtggatcctgcacaagtacactttttct 26274534  T
Q  196 tttctctc 203  Q
    ||||||||    
T  26274535 tttctctc 26274542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 94 - 204
Target Start/End: Complemental strand, 11152476 - 11152367
Alignment:
Q  94 agtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttct 193  Q
    |||||||| |||| |||||| |||| | ||||||||||||| |||| ||||| |||||| ||||| ||||||| || ||||||| |||| ||| ||||||    
T  11152476 agtaatgaaacatagacacc-ttaggtggcaatacacccttcgacatccacacaaaaatctgacacgtagtcatgtagaccccgcacaagcacgctttct 11152378  T
Q  194 cttttctctcc 204  Q
     ||| ||||||    
T  11152377 ttttcctctcc 11152367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 93 - 202
Target Start/End: Complemental strand, 37926538 - 37926429
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||| ||||||||| || | | |||| | |||||||| | ||| |||||||||||||||| ||||| || | ||| |||| |||||||||  ||||||||    
T  37926538 gagttatgatacatagatatctttaggtggcaatacatcttttaacacccacataaaaatctgacacgtggccacatggatcccgtacaagtacactttc 37926439  T
Q  193 tcttttctct 202  Q
    ||||||||||    
T  37926438 tcttttctct 37926429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 204
Target Start/End: Complemental strand, 49811627 - 49811516
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||| |||||| || |||| |||||| |  ||||||||| ||||||| ||||| |||||| ||||| |||| ||  | ||| ||| |||| |||||||||    
T  49811627 gagttatgatagatagacatccttaggtgacaatacaccatttgacatccacacaaaaatctgacacgtagccatatagactccgcacaagcacactttc 49811528  T
Q  193 tcttttctctcc 204  Q
    ||||||||||||    
T  49811527 tcttttctctcc 49811516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 177
Target Start/End: Original strand, 6260868 - 6260954
Alignment:
Q  91 atgagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccg 177  Q
    |||||| |||||| || || | |||||| | | ||||||||| |  |||||||||||||||| | |||||| |||||||||||||||    
T  6260868 atgagttatgatagatagatatccttaggtggtaatacacccctgaacacccacataaaaatctaacatgtggtcacgtggaccccg 6260954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 197
Target Start/End: Original strand, 47748441 - 47748546
Alignment:
Q  91 atgagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactt 190  Q
    |||||| |||||||||  | |||||||| | ||||||||||||| |||||||| |||||||| |||||||| | ||  |||| |||| ||||  | ||||    
T  47748441 atgagttatgatacataaatacccttaggtggcaatacaccctt-gacacccatataaaaatctgacatgtggccatatggatcccgcacaagtatactt 47748539  T
Q  191 tctcttt 197  Q
    |||||||    
T  47748540 tctcttt 47748546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 193
Target Start/End: Complemental strand, 3302637 - 3302533
Alignment:
Q  89 ttatgagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacac 188  Q
    ||||||||||||||||||  ||| |||||| |  ||||| |  | | |||||||||| |||||| ||||| ||| |||  |||||||| ||||| |||||    
T  3302637 ttatgagtaatgatacatatacatccttaggtgacaatatattcctggacacccacacaaaaatctgacacgtaatcatatggaccccatacaagcacac 3302538  T
Q  189 tttct 193  Q
    |||||    
T  3302537 tttct 3302533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 84; Significance: 4e-40; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 93 - 204
Target Start/End: Complemental strand, 24995207 - 24995096
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    ||||||||||| || ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| |||| ||||    
T  24995207 gagtaatgatatatggacacccttagatggcaatacaccctttgacacccacataaaaatttgacacgtagtcacgtggaccccgcacaagcacattttc 24995108  T
Q  193 tcttttctctcc 204  Q
    ||||||||||||    
T  24995107 tcttttctctcc 24995096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 92 - 202
Target Start/End: Complemental strand, 11511563 - 11511453
Alignment:
Q  92 tgagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacacttt 191  Q
    ||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| |||| ||||||||    
T  11511563 tgagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 11511464  T
Q  192 ctcttttctct 202  Q
    |||||||||||    
T  11511463 ctcttttctct 11511453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 92 - 204
Target Start/End: Original strand, 6034043 - 6034155
Alignment:
Q  92 tgagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacacttt 191  Q
    ||||||||||||||| ||||||||||| | |||||||||||||||||||||||| |||||| ||||||||||||||||||| |||| |||| ||||||||    
T  6034043 tgagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcacacttt 6034142  T
Q  192 ctcttttctctcc 204  Q
    |||||||||||||    
T  6034143 ctcttttctctcc 6034155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 93 - 204
Target Start/End: Complemental strand, 480547 - 480436
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||||||||||||| ||||||||||| |  ||||||||||||||||||||||| |||||| ||||| ||||||||||||||||||||||| |||||||||    
T  480547 gagtaatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttc 480448  T
Q  193 tcttttctctcc 204  Q
    ||||||||||||    
T  480447 tcttttctctcc 480436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 93 - 204
Target Start/End: Complemental strand, 48183149 - 48183038
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||||||||||||| ||||||||||  | |||||||||||||||||||||||| |||||| ||||| |||||||||||||||||| |||| |||||||||    
T  48183149 gagtaatgatacatagacacccttacgtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 48183050  T
Q  193 tcttttctctcc 204  Q
    ||||||||||||    
T  48183049 tcttttctctcc 48183038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 93 - 204
Target Start/End: Complemental strand, 29234345 - 29234234
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||||||||||||| ||||||||||||| |||||||||||||||| |||  || |||||| ||||| |||||||||||||||||| |||| |||||||||    
T  29234345 gagtaatgatacatagacacccttagatggcaatacaccctttgataccttcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 29234246  T
Q  193 tcttttctctcc 204  Q
    ||||||||||||    
T  29234245 tcttttctctcc 29234234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 93 - 204
Target Start/End: Original strand, 41236347 - 41236458
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||||||||||||| ||||||||||| | |||||||||| ||||||| ||||| |||||| ||||| |||||||||||||||||| |||| |||||||||    
T  41236347 gagtaatgatacatagacacccttaggtggcaatacaccttttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 41236446  T
Q  193 tcttttctctcc 204  Q
    ||||||||||||    
T  41236447 tcttttctctcc 41236458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 93 - 204
Target Start/End: Complemental strand, 50052528 - 50052417
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||||||||||||| |||| |||||| | |||||||||||||||||||||||| |||||| ||||| |||||||||||||||||| |||| |||||||||    
T  50052528 gagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 50052429  T
Q  193 tcttttctctcc 204  Q
    ||||| ||||||    
T  50052428 tctttcctctcc 50052417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 93 - 204
Target Start/End: Complemental strand, 42044467 - 42044356
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||||||||||||| ||||||||||| | |||||||| ||||  ||||||||| |||||| ||||| |||||||||||||||||| |||| |||||||||    
T  42044467 gagtaatgatacatagacacccttaggtggcaatacatccttgtacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 42044368  T
Q  193 tcttttctctcc 204  Q
    ||||||||||||    
T  42044367 tcttttctctcc 42044356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 92 - 204
Target Start/End: Complemental strand, 54473634 - 54473522
Alignment:
Q  92 tgagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacacttt 191  Q
    ||||||||||||||| ||||||||||| |  ||||||||| ||||||||||||| |||||| | ||| |||||||||||||||||| |||| ||||||||    
T  54473634 tgagtaatgatacatagacacccttaggtgacaatacaccatttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacacttt 54473535  T
Q  192 ctcttttctctcc 204  Q
     ||||||||||||    
T  54473534 atcttttctctcc 54473522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 93 - 204
Target Start/End: Original strand, 29239886 - 29239997
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||||||||||||| ||||||||||| | |||||||||| ||||||| ||||| |||||| | ||| |||||||||||||||||  |||| |||||||||    
T  29239886 gagtaatgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctaacacgtagtcacgtggaccccacacaagcacactttc 29239985  T
Q  193 tcttttctctcc 204  Q
    ||||| ||||||    
T  29239986 tctttcctctcc 29239997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 91 - 197
Target Start/End: Original strand, 3481652 - 3481758
Alignment:
Q  91 atgagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactt 190  Q
    |||||||||||||||| |||||| |||| | ||||||||| |||||||||||||| |||||| |||||  ||||||||||||||||  |||| |||||||    
T  3481652 atgagtaatgatacatagacacctttaggtggcaatacactctttgacacccacacaaaaatctgacacatagtcacgtggaccccacacaagcacactt 3481751  T
Q  191 tctcttt 197  Q
    |||||||    
T  3481752 tctcttt 3481758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 93 - 204
Target Start/End: Original strand, 23608235 - 23608346
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    ||||||||||| || |||||||||||||  ||||||||| ||||||||||||| |||||| ||||| ||||||||||| || ||  |||| |||||||||    
T  23608235 gagtaatgatatatagacacccttagatgacaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtgaactccacacaagcacactttc 23608334  T
Q  193 tcttttctctcc 204  Q
    |||||| |||||    
T  23608335 tcttttatctcc 23608346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 92 - 203
Target Start/End: Original strand, 31910191 - 31910302
Alignment:
Q  92 tgagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacacttt 191  Q
    ||||| ||||||||| |||| |||||| |  |||||||| |||||||||||||| |||||| |||||  ||| ||| ||||||||| |||| ||||||||    
T  31910191 tgagttatgatacatagacatccttaggtgacaatacactctttgacacccacacaaaaatctgacacatagccacatggaccccgcacaagcacacttt 31910290  T
Q  192 ctcttttctctc 203  Q
    ||||||||||||    
T  31910291 ctcttttctctc 31910302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 92 - 204
Target Start/End: Complemental strand, 50526272 - 50526160
Alignment:
Q  92 tgagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacacttt 191  Q
    ||||||||||||||| |||| | |||| | |||||||||||||||||||||||| |||||| ||||| || ||||||||||  ||| |||| ||| ||||    
T  50526272 tgagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggtcacgtggattccgcacaagcacgcttt 50526173  T
Q  192 ctcttttctctcc 204  Q
    || ||| ||||||    
T  50526172 ctatttcctctcc 50526160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 91 - 204
Target Start/End: Original strand, 40574777 - 40574890
Alignment:
Q  91 atgagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactt 190  Q
    |||||| ||||||||| |||| |||||| | | |||||||||||||||||||||| |||||| ||||| |  |  || |||| |||| |||| |||||||    
T  40574777 atgagttatgatacatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgctgctacatggatcccgaacaagcacactt 40574876  T
Q  191 tctcttttctctcc 204  Q
    ||||||||||||||    
T  40574877 tctcttttctctcc 40574890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 131 - 203
Target Start/End: Original strand, 41823920 - 41823992
Alignment:
Q  131 cctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttctcttttctctc 203  Q
    ||||| ||||||||| |||||| ||||| |||||||| ||||||||| |||| ||||||||||||||||||||    
T  41823920 cctttaacacccacacaaaaatctgacacgtagtcacatggaccccgcacaagcacactttctcttttctctc 41823992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 98 - 204
Target Start/End: Complemental strand, 53352660 - 53352555
Alignment:
Q  98 atgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttctcttt 197  Q
    ||||||||| ||||||||||| | ||||||||  |||| ||||| ||| |||||| ||||| ||||| | |||||||||| |||| || |||||||||||    
T  53352660 atgatacatagacacccttaggt-gcaatacattctttaacacctacacaaaaatctgacacgtagttaagtggaccccgcacaagcatactttctcttt 53352562  T
Q  198 tctctcc 204  Q
    |||||||    
T  53352561 tctctcc 53352555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 93 - 197
Target Start/End: Complemental strand, 19670816 - 19670712
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||| |||||||||  |||||||||| | ||||||||||| ||||||| |||| |||||| |||||||| | ||  ||||||||| ||||  ||||||||    
T  19670816 gagttatgatacataaacacccttaggtggcaatacaccccttgacactcacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 19670717  T
Q  193 tcttt 197  Q
    |||||    
T  19670716 tcttt 19670712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 111 - 197
Target Start/End: Complemental strand, 17983825 - 17983739
Alignment:
Q  111 acccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttctcttt 197  Q
    |||||||| | ||||||||||| |||||||||||| |||||| |||||||| | ||  ||||||||| ||||  |||||||||||||    
T  17983825 acccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctcttt 17983739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 93 - 197
Target Start/End: Original strand, 29977885 - 29977989
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    ||||||||||||||  | | || ||| | ||||||||||| || ||||||||| |||||| ||||| |||||||  ||||||||  |||| |||||||||    
T  29977885 gagtaatgatacatacagaaccataggtggcaatacaccccttaacacccacacaaaaatctgacacgtagtcatatggaccccacacaagcacactttc 29977984  T
Q  193 tcttt 197  Q
    |||||    
T  29977985 tcttt 29977989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 93 - 197
Target Start/End: Original strand, 47986208 - 47986312
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||| |||||||||  |||||||||| | |||||||| || |||||| ||||| |||||| |||||||| | ||  ||||||||| ||||  ||||||||    
T  47986208 gagttatgatacataaacacccttaggtggcaatacatcccttgacatccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 47986307  T
Q  193 tcttt 197  Q
    |||||    
T  47986308 tcttt 47986312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 93 - 197
Target Start/End: Complemental strand, 50813992 - 50813888
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||| |||||||||  |||| ||||| | | ||||||||| |||||||||||| |||||| |||||||| ||||  || |||||| ||||  ||||||||    
T  50813992 gagttatgatacataaacactcttaggtggtaatacaccccttgacacccacacaaaaatctgacatgtggtcatatgaaccccgcacaagtacactttc 50813893  T
Q  193 tcttt 197  Q
    |||||    
T  50813892 tcttt 50813888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 93 - 161
Target Start/End: Original strand, 55475191 - 55475259
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgt 161  Q
    |||| |||||||||  ||| |||||| | |||||||||||||||||||||||| |||||| ||||||||    
T  55475191 gagttatgatacataaacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacatgt 55475259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 204
Target Start/End: Complemental strand, 48647806 - 48647715
Alignment:
Q  113 ccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttctcttttctctcc 204  Q
    |||||| || |||||||||  || |||||||||||||||| | ||| || ||||||||||| ||| |||| |||| ||||||||| ||||||    
T  48647806 ccttaggtaacaatacacctcttaacacccacataaaaatctaacacgtggtcacgtggactccgcacaagcacaatttctctttcctctcc 48647715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 194
Target Start/End: Complemental strand, 28480324 - 28480267
Alignment:
Q  137 acacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttctc 194  Q
    |||| |||| |||||| ||||||||||||| |||||||||  ||||||||||||||||    
T  28480324 acactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacacactttctc 28480267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 194
Target Start/End: Complemental strand, 28481199 - 28481142
Alignment:
Q  137 acacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttctc 194  Q
    |||| |||| |||||| ||||||||||||| |||||||||  ||||||||||||||||    
T  28481199 acactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacacactttctc 28481142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 194
Target Start/End: Complemental strand, 28482074 - 28482017
Alignment:
Q  137 acacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttctc 194  Q
    |||| |||| |||||| ||||||||||||| |||||||||  ||||||||||||||||    
T  28482074 acactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacacactttctc 28482017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 197
Target Start/End: Complemental strand, 8343263 - 8343159
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||| |||||||||  ||| |||||| | |||||||| ||||||||||| |||||||||| |||||||| | ||  ||||||||| | ||  | ||||||    
T  8343263 gagttatgatacataaacatccttaggtggcaatacatcctttgacacctacataaaaatctgacatgtggccatatggaccccgcataagtatactttc 8343164  T
Q  193 tcttt 197  Q
    |||||    
T  8343163 tcttt 8343159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 197
Target Start/End: Original strand, 32766958 - 32767062
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||| |||||||||  |||| ||||| | ||||||||||| |||||||||| | |||||| |||||||| | ||  ||||||| | ||||  ||||||||    
T  32766958 gagttatgatacataaacactcttaggtggcaatacaccccttgacacccatacaaaaatctgacatgtggccatatggaccctgcacaagtacactttc 32767057  T
Q  193 tcttt 197  Q
    |||||    
T  32767058 tcttt 32767062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 197
Target Start/End: Original strand, 47104544 - 47104648
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    ||||||||||| || ||||  |||||||  |||||||| || ||||||||||| |||||||||||| || ||    | ||||||  ||||||||||||||    
T  47104544 gagtaatgatatatagacattcttagatgacaatacactctctgacacccacacaaaaatttgacacgtggttttattgaccccacacaaacacactttc 47104643  T
Q  193 tcttt 197  Q
    |||||    
T  47104644 tcttt 47104648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 161
Target Start/End: Complemental strand, 29548059 - 29547991
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgt 161  Q
    |||| |||||||||  ||| |||||| | |||||||| || |||||||||||| |||||| ||||||||    
T  29548059 gagttatgatacataaacatccttaggtggcaatacatcccttgacacccacacaaaaatctgacatgt 29547991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 197
Target Start/End: Complemental strand, 29589823 - 29589736
Alignment:
Q  109 acacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttctcttt 197  Q
    |||||||||| | ||||||||||| |||||||||||| |||||| ||| |||| | ||  ||||||||  ||||  |||||||||||||    
T  29589823 acacccttagtt-gcaatacaccccttgacacccacacaaaaatctgatatgtggccatatggaccccacacaagtacactttctcttt 29589736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 83; Significance: 2e-39; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 90 - 204
Target Start/End: Original strand, 53982008 - 53982122
Alignment:
Q  90 tatgagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacact 189  Q
    ||||||||||||||||| ||||||||||| | |||||||||||||||||||||||| |||||| ||||| |||||||||||||||||| |||| ||||||    
T  53982008 tatgagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 53982107  T
Q  190 ttctcttttctctcc 204  Q
    |||||||||||||||    
T  53982108 ttctcttttctctcc 53982122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 98 - 203
Target Start/End: Original strand, 52629305 - 52629410
Alignment:
Q  98 atgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttctcttt 197  Q
    ||||||||| ||||||||||| | |||||||||||||||||||||||| |||||| ||||| ||||||||||||||||||||||| ||||||||||||||    
T  52629305 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttctcttt 52629404  T
Q  198 tctctc 203  Q
    ||||||    
T  52629405 tctctc 52629410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 92 - 204
Target Start/End: Original strand, 33644199 - 33644311
Alignment:
Q  92 tgagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacacttt 191  Q
    ||||||||||||||| ||||||||| | | |||||||||||||||||||||||| |||||| ||||| |||||||||||||||||| |||| ||||||||    
T  33644199 tgagtaatgatacatagacacccttgggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 33644298  T
Q  192 ctcttttctctcc 204  Q
    |||||||||||||    
T  33644299 ctcttttctctcc 33644311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 93 - 204
Target Start/End: Original strand, 49607414 - 49607525
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||||||||||||| ||||||||||| | |||||||||||||||||||||||| |||||| ||||| ||||||||||||| |||  |||| |||||||||    
T  49607414 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaagcacactttc 49607513  T
Q  193 tcttttctctcc 204  Q
    ||||||||||||    
T  49607514 tcttttctctcc 49607525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 93 - 203
Target Start/End: Complemental strand, 54868995 - 54868885
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||||||||||||| ||||||||||| | |||||||||| ||||||||||||| |||||| ||||| ||||| |||||||||||| |||| |||||||||    
T  54868995 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcacactttc 54868896  T
Q  193 tcttttctctc 203  Q
    |||||||||||    
T  54868895 tcttttctctc 54868885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 93 - 202
Target Start/End: Complemental strand, 11095453 - 11095346
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||||||||||||| ||||||||||| | |||||||||||||||||||||||| |||||| ||||| ||||||||||  |||||| | ||||||||||||    
T  11095453 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgt--accccgcataaacacactttc 11095356  T
Q  193 tcttttctct 202  Q
    ||||||||||    
T  11095355 tcttttctct 11095346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 94 - 204
Target Start/End: Original strand, 31456690 - 31456800
Alignment:
Q  94 agtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttct 193  Q
    ||||||||||||| ||||||| |||   |||||||||||||||||||||||| |||||| ||||| ||||||| |||||||||| |||| ||||||||||    
T  31456690 agtaatgatacatagacacccataggcggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttct 31456789  T
Q  194 cttttctctcc 204  Q
    |||||||||||    
T  31456790 cttttctctcc 31456800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 93 - 204
Target Start/End: Original strand, 8076393 - 8076504
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    ||||||||||||||  |||||||||| | ||| |||||||||||||||||||| |||||| | ||| |||||||||||||||||| |||| |||||||||    
T  8076393 gagtaatgatacataaacacccttaggtggcagtacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttc 8076492  T
Q  193 tcttttctctcc 204  Q
    ||||| ||||||    
T  8076493 tctttcctctcc 8076504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 93 - 204
Target Start/End: Complemental strand, 24700054 - 24699943
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||||||||||||| |||| |||||| | |||||||||| |||||||||||||||||||| || || || | ||||||||||| ||||||||||||||||    
T  24700054 gagtaatgatacatagacatccttagttggcaatacaccttttgacacccacataaaaatctggcacgtggccacgtggaccctgtacaaacacactttc 24699955  T
Q  193 tcttttctctcc 204  Q
    ||||| ||||||    
T  24699954 tctttcctctcc 24699943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 93 - 204
Target Start/End: Complemental strand, 33118951 - 33118840
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||| ||||||||| ||||||||||| |  ||||||||||||||||||||||| |||||||||||| ||||||||||||| |||  | ||||||||||||    
T  33118951 gagttatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatccctcagaaacacactttc 33118852  T
Q  193 tcttttctctcc 204  Q
    ||||| ||||||    
T  33118851 tctttcctctcc 33118840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 93 - 203
Target Start/End: Original strand, 17470405 - 17470515
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||||||||||||| |||||| |||| | |||||||||| ||| ||||||||| |||||| ||||| |||||||||||||||||  |||| |||||||||    
T  17470405 gagtaatgatacatagacacctttaggtggcaatacaccttttaacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacactttc 17470504  T
Q  193 tcttttctctc 203  Q
    |||||||||||    
T  17470505 tcttttctctc 17470515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 97 - 203
Target Start/End: Complemental strand, 48587187 - 48587081
Alignment:
Q  97 aatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttctctt 196  Q
    |||||||||| || |||||||| | |||||||||||||||||||| |||||||||| ||||| ||||||||||||| |||| ||||  ||||||||||||    
T  48587187 aatgatacatagatacccttaggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggatcccgcacaagtacactttctctt 48587088  T
Q  197 ttctctc 203  Q
    |||||||    
T  48587087 ttctctc 48587081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 93 - 202
Target Start/End: Complemental strand, 27714991 - 27714882
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||||||||||||| |||||| |||| | | |||||||||||||||||||||| |||||| ||||| ||||||| |||||||||| |||| |||||||||    
T  27714991 gagtaatgatacatagacacctttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttc 27714892  T
Q  193 tcttttctct 202  Q
    |||| |||||    
T  27714891 tcttctctct 27714882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 89 - 204
Target Start/End: Complemental strand, 26141636 - 26141521
Alignment:
Q  89 ttatgagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacac 188  Q
    |||||||| ||||||||| |||| |||||| | |||||||||||||| ||||||||| |||||| ||||| || ||||| ||||||||  |||| |||||    
T  26141636 ttatgagttatgatacatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccacacaagcacac 26141537  T
Q  189 tttctcttttctctcc 204  Q
    ||||||||||||||||    
T  26141536 tttctcttttctctcc 26141521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 93 - 204
Target Start/End: Original strand, 9562999 - 9563110
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    ||||||||||||||  ||||| ||||||  ||||||| ||||||||| ||| |||||||| ||||| ||||||||||||| || | ||||||||||||||    
T  9562999 gagtaatgatacataaacaccattagatgacaatacaacctttgacatccatataaaaatctgacacgtagtcacgtggatcctgcacaaacacactttc 9563098  T
Q  193 tcttttctctcc 204  Q
    ||| ||||||||    
T  9563099 tctcttctctcc 9563110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 93 - 204
Target Start/End: Complemental strand, 41189864 - 41189753
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||| |||||||||  ||| |||||| | |||||||| | |||||||||||||||||||||||||| || | ||| ||||||||| |||| |||||||||    
T  41189864 gagttatgatacatatacatccttaggtggcaatacatcatttgacacccacataaaaatttgacacgtggccacatggaccccgcacaagcacactttc 41189765  T
Q  193 tcttttctctcc 204  Q
    ||||||||||||    
T  41189764 tcttttctctcc 41189753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 93 - 197
Target Start/End: Complemental strand, 14623939 - 14623835
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||||||||||||| |||| |||||| | ||||||||||| ||||||||||||||||||| ||||||||  ||| ||||||| |  |||| |||||||||    
T  14623939 gagtaatgatacatagacatccttaggtggcaatacaccccttgacacccacataaaaatctgacatgtgttcatgtggacctcacacaagcacactttc 14623840  T
Q  193 tcttt 197  Q
    |||||    
T  14623839 tcttt 14623835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 98 - 204
Target Start/End: Original strand, 26754700 - 26754806
Alignment:
Q  98 atgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttctcttt 197  Q
    ||||| ||| ||||||||||| | ||||||||||||| |||| ||||| |||||| |||||||| ||||| ||||||||| |||| |||| |||||||||    
T  26754700 atgattcatagacacccttaggtggcaatacacccttggacatccacacaaaaatctgacatgtggtcacatggaccccgcacaagcacattttctcttt 26754799  T
Q  198 tctctcc 204  Q
     ||||||    
T  26754800 cctctcc 26754806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 92 - 203
Target Start/End: Complemental strand, 20765016 - 20764905
Alignment:
Q  92 tgagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacacttt 191  Q
    ||||| |||| |||| |||| |||||| | | ||||||| |||| ||||||||| |||||| ||||| || | ||| |||||||||||||| ||||||||    
T  20765016 tgagttatgagacatagacatccttaggtggtaatacactctttaacacccacacaaaaatctgacacgtggccacatggaccccgtacaagcacacttt 20764917  T
Q  192 ctcttttctctc 203  Q
    ||||||||||||    
T  20764916 ctcttttctctc 20764905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 92 - 203
Target Start/End: Complemental strand, 30801834 - 30801723
Alignment:
Q  92 tgagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacacttt 191  Q
    |||| |||||||||| ||||||||||| |   |||||||||||||| ||||||| |||||| |||||||||||||  ||||||||  |||| |||| |||    
T  30801834 tgagcaatgatacatagacacccttaggtgataatacaccctttgatacccacacaaaaatatgacatgtagtcatatggaccccacacaagcacatttt 30801735  T
Q  192 ctcttttctctc 203  Q
    |||||| |||||    
T  30801734 ctctttcctctc 30801723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 93 - 204
Target Start/End: Complemental strand, 51419460 - 51419349
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||| ||||||||| |||| ||||||||  ||||||| ||||| ||||||||| |||||| ||||| || | ||| | ||||||| |||| |||||||||    
T  51419460 gagttatgatacatagacatccttagatgacaatacatcctttaacacccacacaaaaatctgacacgtggccacatagaccccgcacaagcacactttc 51419361  T
Q  193 tcttttctctcc 204  Q
    ||||||||||||    
T  51419360 tcttttctctcc 51419349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 93 - 204
Target Start/End: Complemental strand, 36707524 - 36707417
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||||||||||||| || |||||||| |  ||||||||||||||||| ||||| |||||| ||||| ||||| ||||||| ||||      |||||||||    
T  36707524 gagtaatgatacatagatacccttaggtgacaatacaccctttgacatccacacaaaaatctgacacgtagttacgtggatcccg----cgcacactttc 36707429  T
Q  193 tcttttctctcc 204  Q
    ||||||||||||    
T  36707428 tcttttctctcc 36707417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 93 - 174
Target Start/End: Original strand, 35536626 - 35536707
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggacc 174  Q
    |||||||||||||| |||| |||||  | |||||||||| |||||||||||||||||||| ||||| || |||| |||||||    
T  35536626 gagtaatgatacatagacatccttatgtggcaatacaccatttgacacccacataaaaatgtgacacgtggtcatgtggacc 35536707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 93 - 204
Target Start/End: Complemental strand, 11348022 - 11347911
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||| ||||||||| |||| |||||| |  ||||||| ||||||||| ||||| |||||| ||||| || | ||| ||||||| | | || |||||||||    
T  11348022 gagttatgatacatagacatccttaggtgacaatacatcctttgacatccacacaaaaatctgacacgtggccacatggaccctgcataagcacactttc 11347923  T
Q  193 tcttttctctcc 204  Q
    ||||||||||||    
T  11347922 tcttttctctcc 11347911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 93 - 204
Target Start/End: Original strand, 11907371 - 11907482
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||| ||||||||| ||||||||||| |  |||||||| | |  |||| |||| |||||| |||||||| ||||  ||||||||| |||| |||| ||||    
T  11907371 gagttatgatacatagacacccttaggtgacaatacacacctgaacactcacacaaaaatctgacatgtggtcatatggaccccgcacaagcacattttc 11907470  T
Q  193 tcttttctctcc 204  Q
    ||||||||||||    
T  11907471 tcttttctctcc 11907482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 94 - 197
Target Start/End: Complemental strand, 13898154 - 13898051
Alignment:
Q  94 agtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttct 193  Q
    |||||||||| ||  ||| |||||| | ||||||||||| ||||||||||||||||||| ||||| ||  ||| ||||||| |  |||| ||||||||||    
T  13898154 agtaatgatagataaacatccttaggtggcaatacaccccttgacacccacataaaaatctgacacgtgttcatgtggacctcacacaagcacactttct 13898055  T
Q  194 cttt 197  Q
    ||||    
T  13898054 cttt 13898051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 93 - 204
Target Start/End: Original strand, 47531865 - 47531976
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||| ||||||||| |||| |||||||| |||||||||| ||| ||| ||||| || ||| ||||| || | ||  || |||||| |||| |||||||||    
T  47531865 gagttatgatacatagacatccttagatggcaatacaccttttaacatccacacaagaatctgacacgtggccatatgaaccccgcacaagcacactttc 47531964  T
Q  193 tcttttctctcc 204  Q
    ||||||||||||    
T  47531965 tcttttctctcc 47531976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 93 - 175
Target Start/End: Original strand, 41080709 - 41080790
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccc 175  Q
    |||||||||||||| |||| |||||| |||||| ||||||||||||||||||  |||||| ||| |||| |||| ||||||||    
T  41080709 gagtaatgatacatagacatccttag-tagcaaaacaccctttgacacccacgcaaaaatctgatatgtggtcatgtggaccc 41080790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 93 - 158
Target Start/End: Original strand, 8956762 - 8956827
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgaca 158  Q
    |||||||||||||| |||| |||||  | |||||||| |||||||||||||||||||||| |||||    
T  8956762 gagtaatgatacatagacatccttatgtggcaatacatcctttgacacccacataaaaatgtgaca 8956827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 92 - 161
Target Start/End: Complemental strand, 45058653 - 45058585
Alignment:
Q  92 tgagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgt 161  Q
    ||||| |||||||||  |||||||||| | ||||||||||||| ||||||||||||||||| ||||||||    
T  45058653 tgagttatgatacataaacacccttaggtggcaatacaccctt-gacacccacataaaaatctgacatgt 45058585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 197
Target Start/End: Original strand, 42823142 - 42823215
Alignment:
Q  124 aatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttctcttt 197  Q
    ||||||||| |||||||||||| ||||||||||||||| ||||  ||||||||| | ||  | |||||||||||    
T  42823142 aatacaccccttgacacccacaaaaaaatttgacatgtggtcatatggaccccgcataagtatactttctcttt 42823215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 122 - 197
Target Start/End: Complemental strand, 36331400 - 36331325
Alignment:
Q  122 gcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttctcttt 197  Q
    ||||| ||||| |||||||||||| |||||| |||||||| | ||  ||||||||| ||||  |||||||||||||    
T  36331400 gcaatgcaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctcttt 36331325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 161
Target Start/End: Complemental strand, 36331478 - 36331410
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgt 161  Q
    |||| |||||||||  |||||||||||| ||||| ||||| |||||| ||||| |||||| || |||||    
T  36331478 gagttatgatacataaacacccttagatggcaatgcaccccttgacatccacacaaaaatctggcatgt 36331410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 83; Significance: 2e-39; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 93 - 203
Target Start/End: Original strand, 30915463 - 30915573
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||||||||||||| ||||||||||| | ||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||||||| |||||||||    
T  30915463 gagtaatgatacatagacacccttaggtggcaatacaccctttgacccccacataaaaatctgacacgtagtcacgtggaccccgtacaagcacactttc 30915562  T
Q  193 tcttttctctc 203  Q
    |||||||||||    
T  30915563 tcttttctctc 30915573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 93 - 204
Target Start/End: Original strand, 17473020 - 17473131
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||||||||| |||||| ||||| ||||||||||||| |||| |||| |||||||||    
T  17473020 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 17473119  T
Q  193 tcttttctctcc 204  Q
    ||||||||||||    
T  17473120 tcttttctctcc 17473131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 93 - 204
Target Start/End: Original strand, 9058480 - 9058591
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||||||||||||| ||||||||||| | |||||||||||||||||||||||| |||||| ||||| ||||||| |||||||||| |||| |||||||||    
T  9058480 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttc 9058579  T
Q  193 tcttttctctcc 204  Q
    ||||||||||||    
T  9058580 tcttttctctcc 9058591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 93 - 203
Target Start/End: Complemental strand, 7465835 - 7465725
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||||||||| |||||| ||||| |||||||||||||||||  |||| |||||||||    
T  7465835 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacactttc 7465736  T
Q  193 tcttttctctc 203  Q
    |||||| ||||    
T  7465735 tcttttatctc 7465725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 93 - 202
Target Start/End: Complemental strand, 5574588 - 5574479
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||||||||||||| ||||| ||||| | ||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||| |||| |||||||||    
T  5574588 gagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 5574489  T
Q  193 tcttttctct 202  Q
    ||||||||||    
T  5574488 tcttttctct 5574479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 91 - 204
Target Start/End: Original strand, 13438341 - 13438454
Alignment:
Q  91 atgagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactt 190  Q
    |||||||||||||||| ||||||||||| |  ||||||| ||||||||||||||| |||||| ||||| |||||||||||||||||| |||| |||||||    
T  13438341 atgagtaatgatacatagacacccttaggtgacaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 13438440  T
Q  191 tctcttttctctcc 204  Q
    ||||||||||||||    
T  13438441 tctcttttctctcc 13438454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 91 - 204
Target Start/End: Complemental strand, 19930922 - 19930809
Alignment:
Q  91 atgagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactt 190  Q
    |||| ||||||||||| ||||||||||| | |||||||||||||||||| ||||| |||||| ||||| ||||||| |||||||||| ||||||||||||    
T  19930922 atgaataatgatacatagacacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaaacacactt 19930823  T
Q  191 tctcttttctctcc 204  Q
    ||||||||||||||    
T  19930822 tctcttttctctcc 19930809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 96 - 204
Target Start/End: Original strand, 28863458 - 28863566
Alignment:
Q  96 taatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttctct 195  Q
    ||||||||||| ||||||||||| | |||||||||||||||||||||||| |||||| ||||| |||||||||||||||||| |||| ||||||||||||    
T  28863458 taatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 28863557  T
Q  196 tttctctcc 204  Q
    ||| |||||    
T  28863558 tttatctcc 28863566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 93 - 204
Target Start/End: Complemental strand, 10249482 - 10249371
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||||||||||||| ||||||||||| |  ||||||||| ||||||||||||| |||||| ||||| |||||||||||||||||| |||| |||||||||    
T  10249482 gagtaatgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 10249383  T
Q  193 tcttttctctcc 204  Q
    ||||||||||||    
T  10249382 tcttttctctcc 10249371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 92 - 203
Target Start/End: Original strand, 40701477 - 40701588
Alignment:
Q  92 tgagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacacttt 191  Q
    ||||||||||||||| ||||||||||| | |||||||||| ||||||||||||| |||||| ||||| ||||| |||||||||||| |||| ||||||||    
T  40701477 tgagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcacacttt 40701576  T
Q  192 ctcttttctctc 203  Q
    ||||||||||||    
T  40701577 ctcttttctctc 40701588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 93 - 203
Target Start/End: Complemental strand, 33436200 - 33436090
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||||||||||||| ||||||||||| | |||||||||||||||||||||||| |||||| | ||| |||||||||||||||||| |||| |||||||||    
T  33436200 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttc 33436101  T
Q  193 tcttttctctc 203  Q
    ||||| |||||    
T  33436100 tctttcctctc 33436090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 93 - 204
Target Start/End: Complemental strand, 32505748 - 32505637
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||||||||||||| ||||||||||| |  ||||||||| ||||||||||||| |||||| ||||| |||||||||||||||||| |||| |||||||||    
T  32505748 gagtaatgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 32505649  T
Q  193 tcttttctctcc 204  Q
    | ||||||||||    
T  32505648 tattttctctcc 32505637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 89 - 203
Target Start/End: Complemental strand, 28381759 - 28381645
Alignment:
Q  89 ttatgagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacac 188  Q
    |||||||||||||||||| ||||||||||| | |||||||||| || |||||||||| |||||| ||||| |||||||| ||||| ||| |||| |||||    
T  28381759 ttatgagtaatgatacatagacacccttaggtggcaatacacctttcgacacccacacaaaaatctgacacgtagtcacatggactccgcacaagcacac 28381660  T
Q  189 tttctcttttctctc 203  Q
    |||||||||||||||    
T  28381659 tttctcttttctctc 28381645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 91 - 204
Target Start/End: Complemental strand, 40614004 - 40613891
Alignment:
Q  91 atgagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactt 190  Q
    |||||| ||||||||| |||| |||||| | |||||||||||||||||||||||| |||||| ||||| || | ||| ||||||||| |||| |||||||    
T  40614004 atgagttatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggccacatggaccccgcacaagcacactt 40613905  T
Q  191 tctcttttctctcc 204  Q
    ||||||||||||||    
T  40613904 tctcttttctctcc 40613891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 91 - 197
Target Start/End: Original strand, 27864702 - 27864808
Alignment:
Q  91 atgagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactt 190  Q
    |||||||||||||||| ||||||||||  | |||||||||||||||||| ||||| |||||| ||||| ||| |||||||||||||| | || |||||||    
T  27864702 atgagtaatgatacatagacacccttatgtggcaatacaccctttgacatccacacaaaaatctgacacgtaatcacgtggaccccgcaaaagcacactt 27864801  T
Q  191 tctcttt 197  Q
    |||||||    
T  27864802 tctcttt 27864808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 93 - 204
Target Start/End: Original strand, 20700815 - 20700926
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||||||||||||| |||| |||||  | ||||||||||||||||| || ||| |||||| ||||| |||||||||||||||||| | || |||||||||    
T  20700815 gagtaatgatacatagacatccttatgtggcaatacaccctttgactcctacacaaaaatctgacacgtagtcacgtggaccccgcataagcacactttc 20700914  T
Q  193 tcttttctctcc 204  Q
    ||||| ||||||    
T  20700915 tctttcctctcc 20700926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 93 - 204
Target Start/End: Complemental strand, 38273242 - 38273131
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||| ||||||||| ||||  ||||||| |||||||||||||| ||||||||| |||||| ||||| |||| ||| ||||||||| || | |||||||||    
T  38273242 gagttatgatacatagacattcttagatggcaatacaccctttaacacccacacaaaaatctgacacgtagccacatggaccccgcactagcacactttc 38273143  T
Q  193 tcttttctctcc 204  Q
    ||||||||||||    
T  38273142 tcttttctctcc 38273131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 92 - 203
Target Start/End: Original strand, 4060684 - 4060795
Alignment:
Q  92 tgagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacacttt 191  Q
    ||||||||||||||| ||||||||||| |  ||||||||| ||||||| ||||| |||||| ||||| ||||| ||||||| |||| | || ||||||||    
T  4060684 tgagtaatgatacatagacacccttaggtgacaatacaccttttgacatccacacaaaaatctgacacgtagttacgtggatcccgcataagcacacttt 4060783  T
Q  192 ctcttttctctc 203  Q
    || |||||||||    
T  4060784 cttttttctctc 4060795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 93 - 204
Target Start/End: Original strand, 42257193 - 42257304
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||| ||||||||| |||| | |||| | |||||||| | |||||||||||||||||||| ||||| || | ||| ||||||||| |||| |||||||||    
T  42257193 gagttatgatacatagacatctttaggtggcaatacatcatttgacacccacataaaaatctgacacgtggccacatggaccccgcacaagcacactttc 42257292  T
Q  193 tcttttctctcc 204  Q
    ||||||||||||    
T  42257293 tcttttctctcc 42257304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 93 - 202
Target Start/End: Complemental strand, 38882913 - 38882802
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtgga---ccccgtacaaacacact 189  Q
    |||||||||||||| ||||||||||| | |||||| ||||||||||| ||||| |||||| ||||| |||||||||||||   ||||| |||| | ||||    
T  38882913 gagtaatgatacatagacacccttaggtggcaata-accctttgacatccacacaaaaatctgacacgtagtcacgtggacccccccgcacaagcgcact 38882815  T
Q  190 ttctcttttctct 202  Q
    |||||||||||||    
T  38882814 ttctcttttctct 38882802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 93 - 202
Target Start/End: Complemental strand, 26891604 - 26891495
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||| ||||||||| | ||||||||| | ||||||||||| | |||||||||| |||||| |||||||| |||||||||||| || |||| |||| ||||    
T  26891604 gagttatgatacatagccacccttaggtggcaatacacccctagacacccacacaaaaatctgacatgtggtcacgtggacctcgaacaagcacattttc 26891505  T
Q  193 tcttttctct 202  Q
    ||||| ||||    
T  26891504 tctttcctct 26891495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 94 - 197
Target Start/End: Original strand, 41575138 - 41575242
Alignment:
Q  94 agtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggacccc-gtacaaacacactttc 192  Q
    ||||||||||||| |||| |||||||| | ||||||||||||||||  |||| ||||||||||||||| |||| |||||||||   |||| |||||||||    
T  41575138 agtaatgatacatagacatccttagatggtaatacaccctttgacattcacacaaaaatttgacatgtggtcatgtggacccctacacaagcacactttc 41575237  T
Q  193 tcttt 197  Q
    |||||    
T  41575238 tcttt 41575242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 93 - 204
Target Start/End: Original strand, 36168836 - 36168947
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||| ||||||||| |||| ||||||||  ||||||| ||||| || |||||| |||||||||||| || | ||| ||||||||| |||| || ||||||    
T  36168836 gagttatgatacatagacatccttagatgacaatacatcctttaactcccacacaaaaatttgacacgtggccacatggaccccgcacaagcatactttc 36168935  T
Q  193 tcttttctctcc 204  Q
    ||||||||||||    
T  36168936 tcttttctctcc 36168947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 92 - 197
Target Start/End: Complemental strand, 17820105 - 17820000
Alignment:
Q  92 tgagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacacttt 191  Q
    ||||| ||||||||| |||| |  ||| | ||||||||||| |||||||||||| |||||| |||||||| || |||||||||||  ||||||||| |||    
T  17820105 tgagttatgatacatagacaactataggtggcaatacaccccttgacacccacacaaaaatctgacatgtggttacgtggaccccacacaaacacatttt 17820006  T
Q  192 ctcttt 197  Q
    ||||||    
T  17820005 ctcttt 17820000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 93 - 158
Target Start/End: Original strand, 33436211 - 33436276
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgaca 158  Q
    |||||||||||||| |||| |||||||| |||||||||| |||||||||||||||||||| |||||    
T  33436211 gagtaatgatacatagacatccttagatggcaatacaccttttgacacccacataaaaatctgaca 33436276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 111 - 197
Target Start/End: Complemental strand, 2997569 - 2997483
Alignment:
Q  111 acccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttctcttt 197  Q
    |||||||| | ||||||||||| |||||||||||| |||||| |||||||| | ||  ||||||||| ||||  |||||||||||||    
T  2997569 acccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctcttt 2997483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 91 - 197
Target Start/End: Original strand, 43490119 - 43490225
Alignment:
Q  91 atgagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactt 190  Q
    |||||| |||||||||  |||||||||| |  |||||||||| |||||||||||| |||||| |||||||| | ||  ||||||||| ||||  ||||||    
T  43490119 atgagttatgatacataaacacccttaggtgacaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactt 43490218  T
Q  191 tctcttt 197  Q
    | |||||    
T  43490219 tatcttt 43490225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 204
Target Start/End: Original strand, 3439985 - 3440090
Alignment:
Q  99 tgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttctctttt 198  Q
    |||||| | ||||||||||| | ||||||||| | | |||||||||| |||||| | ||||||  | |||||||||||| |||| |||| |||||||||     
T  3439985 tgatacgtagacacccttaggtggcaatacactcctggacacccacacaaaaatctaacatgtgattacgtggaccccgcacaagcacattttctctttc 3440084  T
Q  199 ctctcc 204  Q
    ||||||    
T  3440085 ctctcc 3440090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 109 - 197
Target Start/End: Original strand, 13365369 - 13365457
Alignment:
Q  109 acacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttctcttt 197  Q
    |||||||||||| |||||| |||| |||||||||||| |||||| ||||||||   ||  ||||||||| ||||  |||||||||||||    
T  13365369 acacccttagatggcaatataccccttgacacccacacaaaaatctgacatgtgaccatatggaccccgcacaagtacactttctcttt 13365457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 93 - 197
Target Start/End: Original strand, 38732354 - 38732458
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||| |||||||||  |||||||||  |  ||||||| || |||||||||||| |||||| |||||||| ||||  ||||||||| ||||  ||||||||    
T  38732354 gagttatgatacataaacacccttatgtgacaatacatcccttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaagtacactttc 38732453  T
Q  193 tcttt 197  Q
    |||||    
T  38732454 tcttt 38732458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 204
Target Start/End: Original strand, 2533124 - 2533234
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||| ||||||||| |||| |||||  | |||||||| ||||||||| ||||| |||||| ||||| |||| ||| | ||||||| |||| ||||||||     
T  2533124 gagttatgatacatagacatccttaagtggcaatacatcctttgaca-ccacacaaaaatctgacacgtagccacatagaccccgcacaagcacactttt 2533222  T
Q  193 tcttttctctcc 204  Q
    |||||| |||||    
T  2533223 tcttttatctcc 2533234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 197
Target Start/End: Complemental strand, 45097835 - 45097731
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||| |||||||||  ||| |||||| | |||||||| || |||||||||| | |||||| |||||||| | ||  ||||||||| ||||  ||||||||    
T  45097835 gagttatgatacataaacatccttaggtggcaatacatcccttgacacccatacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 45097736  T
Q  193 tcttt 197  Q
    |||||    
T  45097735 tcttt 45097731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 80; Significance: 1e-37; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 89 - 204
Target Start/End: Complemental strand, 34012400 - 34012285
Alignment:
Q  89 ttatgagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacac 188  Q
    |||||||||||||||||| ||||||||||| | | |||||||||||||||||||||| |||||||||||| ||||||||||||| |||| |||| |||||    
T  34012400 ttatgagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcacac 34012301  T
Q  189 tttctcttttctctcc 204  Q
    ||||||||||||||||    
T  34012300 tttctcttttctctcc 34012285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 91 - 204
Target Start/End: Original strand, 15197331 - 15197444
Alignment:
Q  91 atgagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactt 190  Q
    |||||||||||||||| ||||| ||||| | |||||||||||||||||||||||| |||||| ||||| |||||||||||||||||| |||| |||||||    
T  15197331 atgagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 15197430  T
Q  191 tctcttttctctcc 204  Q
    ||||||||||||||    
T  15197431 tctcttttctctcc 15197444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 93 - 204
Target Start/End: Original strand, 12831047 - 12831158
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||||||||||||| ||||||||||| |  ||||||||||||||||||||||| |||||| ||||| |||||||||||||||||| |||| |||||||||    
T  12831047 gagtaatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 12831146  T
Q  193 tcttttctctcc 204  Q
    ||||||||||||    
T  12831147 tcttttctctcc 12831158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 91 - 203
Target Start/End: Complemental strand, 504223 - 504111
Alignment:
Q  91 atgagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactt 190  Q
    |||||||||||||||| ||||||||||| | |||||||||| ||||||||||||| |||||| ||||| |||||||||||||||||| |||| ||||| |    
T  504223 atgagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacat 504124  T
Q  191 tctcttttctctc 203  Q
    |||||||||||||    
T  504123 tctcttttctctc 504111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 93 - 204
Target Start/End: Original strand, 14547922 - 14548033
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||||| ||||||| ||||||||||| | |||||||||| ||||||||||||| |||||| ||||| |||||||||||||||||| |||| |||||||||    
T  14547922 gagtaaagatacatagacacccttaggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 14548021  T
Q  193 tcttttctctcc 204  Q
    ||||||||||||    
T  14548022 tcttttctctcc 14548033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 90 - 204
Target Start/End: Complemental strand, 23122700 - 23122586
Alignment:
Q  90 tatgagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacact 189  Q
    ||||||||||||||||| ||||||||||  | |||||||||| ||||||||||||| |||||| ||||| |||||||||||||||||| | || ||||||    
T  23122700 tatgagtaatgatacatagacacccttaagtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcataagcacact 23122601  T
Q  190 ttctcttttctctcc 204  Q
    |||||||||||||||    
T  23122600 ttctcttttctctcc 23122586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 92 - 204
Target Start/End: Complemental strand, 40424044 - 40423932
Alignment:
Q  92 tgagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacacttt 191  Q
    ||||||||||||||| || |||||||| | |||||||||||||||||| ||||| |||||| ||||| ||||||| |||||||||| |||| ||||||||    
T  40424044 tgagtaatgatacatagatacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacacttt 40423945  T
Q  192 ctcttttctctcc 204  Q
    |||||||||||||    
T  40423944 ctcttttctctcc 40423932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 93 - 203
Target Start/End: Complemental strand, 44507187 - 44507077
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||||||||||||| ||||||||||| | | ||||||| |||| ||||||||| |||||| ||||| ||||||||||||||||||||||| || ||||||    
T  44507187 gagtaatgatacatagacacccttaggtggtaatacactctttaacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcatactttc 44507088  T
Q  193 tcttttctctc 203  Q
    |||||||||||    
T  44507087 tcttttctctc 44507077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 93 - 204
Target Start/End: Complemental strand, 1180040 - 1179929
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||||||||||||| ||||||||||| | | |||||||||||||||||||||| |||||| ||||| ||||||| |||||  ||| |||| |||||||||    
T  1180040 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggattccgcacaagcacactttc 1179941  T
Q  193 tcttttctctcc 204  Q
    ||||||||||||    
T  1179940 tcttttctctcc 1179929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 94 - 204
Target Start/End: Original strand, 5957831 - 5957941
Alignment:
Q  94 agtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttct 193  Q
    ||||||||||||| ||||  ||||| | |||||||||||||||||||||||| |||||| ||||| ||||||||||||| |||| |||| ||||||||||    
T  5957831 agtaatgatacatagacattcttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaatcacactttct 5957930  T
Q  194 cttttctctcc 204  Q
    |||| ||||||    
T  5957931 ctttcctctcc 5957941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 93 - 197
Target Start/End: Complemental strand, 10284731 - 10284627
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||| ||||||||| ||||||||||  |  |||||||| |||||||||||||| |||||||||||| |||||||||||||||||| |||| |||||||||    
T  10284731 gagttatgatacatagacacccttaagtgacaatacactctttgacacccacacaaaaatttgacacgtagtcacgtggaccccgcacaagcacactttc 10284632  T
Q  193 tcttt 197  Q
    |||||    
T  10284631 tcttt 10284627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 93 - 204
Target Start/End: Original strand, 37038479 - 37038590
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||||||||||||| |||| | |||| | |||||||||||||||||||||||| |||||| ||||| ||||||||||||| |||| |||| |||||||||    
T  37038479 gagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 37038578  T
Q  193 tcttttctctcc 204  Q
    | ||| ||||||    
T  37038579 tatttcctctcc 37038590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 91 - 204
Target Start/End: Complemental strand, 43414683 - 43414570
Alignment:
Q  91 atgagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactt 190  Q
    |||||| ||||||||| |||| |||||||| |||| ||||||||||||||||||| |||||| | ||| || ||||| |||| |||| |||| |||||||    
T  43414683 atgagttatgatacatagacatccttagatggcaacacaccctttgacacccacacaaaaatctaacacgtggtcacatggatcccgcacaagcacactt 43414584  T
Q  191 tctcttttctctcc 204  Q
    ||||||||||||||    
T  43414583 tctcttttctctcc 43414570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 93 - 204
Target Start/End: Complemental strand, 4854963 - 4854852
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||||||||||||| |||| |||||| | |||||||||||||| ||||| |||||||||| ||| |||| | ||| ||||||| | |||| |||||||||    
T  4854963 gagtaatgatacatagacatccttaggtggcaatacaccctttaacacctacataaaaatctgatatgtggccacatggaccctgcacaagcacactttc 4854864  T
Q  193 tcttttctctcc 204  Q
    ||||||||||||    
T  4854863 tcttttctctcc 4854852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 112 - 204
Target Start/End: Complemental strand, 8841513 - 8841421
Alignment:
Q  112 cccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttctcttttctctcc 204  Q
    ||||||| | ||| |||||||||||||||||||| |||||| | ||| |||||||||||||||||| |||| |||||||||||||| ||||||    
T  8841513 cccttaggtggcagtacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttctctttcctctcc 8841421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 98 - 204
Target Start/End: Complemental strand, 10621182 - 10621076
Alignment:
Q  98 atgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttctcttt 197  Q
    ||||||||| |||| |||||| | | |||||||||||||||||||||| |||||| ||||| |||| ||| | || |||| |||| ||||||||||||||    
T  10621182 atgatacatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagccacatcgatcccgcacaagcacactttctcttt 10621083  T
Q  198 tctctcc 204  Q
    |||||||    
T  10621082 tctctcc 10621076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 92 - 198
Target Start/End: Complemental strand, 15048282 - 15048177
Alignment:
Q  92 tgagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacacttt 191  Q
    ||||| ||||||||| |||| |||||| | |||||||||||||||||||| ||| |||||| ||||| |||| ||| ||||||||| |||| ||||||||    
T  15048282 tgagttatgatacatagacatccttaggtggcaatacaccctttgacacc-acacaaaaatctgacacgtagccacatggaccccgcacaagcacacttt 15048184  T
Q  192 ctctttt 198  Q
    |||||||    
T  15048183 ctctttt 15048177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 137 - 204
Target Start/End: Original strand, 9122229 - 9122296
Alignment:
Q  137 acacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttctcttttctctcc 204  Q
    ||||||||| |||||| ||||||||||||||||||| |||| |||| |||||||||||||||||||||    
T  9122229 acacccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcacactttctcttttctctcc 9122296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 93 - 204
Target Start/End: Complemental strand, 15259029 - 15258918
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||| ||||||||| || || ||||||| |||||||| || | |||| |||||||||||| |||||||| ||||||||||||| | |||| |||| ||||    
T  15259029 gagttatgatacatagatactcttagatggcaatacatccctggacatccacataaaaatctgacatgtggtcacgtggaccctgcacaagcacattttc 15258930  T
Q  193 tcttttctctcc 204  Q
    ||||| ||||||    
T  15258929 tctttcctctcc 15258918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 89 - 158
Target Start/End: Complemental strand, 20075038 - 20074969
Alignment:
Q  89 ttatgagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgaca 158  Q
    |||||||||||||||||| |||| |||||| | ||||||||| ||||||||||||||||||||| |||||    
T  20075038 ttatgagtaatgatacatagacatccttaggtggcaatacactctttgacacccacataaaaatgtgaca 20074969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 93 - 197
Target Start/End: Original strand, 16383377 - 16383481
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||| |||||||||  |||||||||| | ||||||||||| |||||||||||| |||||| |||||||| | ||  ||||||||| ||||  ||||||||    
T  16383377 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 16383476  T
Q  193 tcttt 197  Q
    |||||    
T  16383477 tcttt 16383481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 93 - 176
Target Start/End: Complemental strand, 14055692 - 14055609
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggacccc 176  Q
    |||| ||||||||||||||||||||| |  |||||||| | |||||| ||||| |||||| | |||||||||||||||||||||    
T  14055692 gagttatgatacattgacacccttaggtgacaatacactccttgacatccacacaaaaatcttacatgtagtcacgtggacccc 14055609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 93 - 161
Target Start/End: Complemental strand, 30479574 - 30479506
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgt 161  Q
    |||| |||||||||  |||||||||| | |||||||||||||||||| |||||||||||| ||||||||    
T  30479574 gagttatgatacataaacacccttaggtggcaatacaccctttgacatccacataaaaatctgacatgt 30479506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 93 - 197
Target Start/End: Original strand, 34307216 - 34307320
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||| |||||||||  |||||||||| | ||||||||||| |||||||||||| |||||| |||||||| | ||  || |||||| ||||  ||||||||    
T  34307216 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggacatatgaaccccgcacaagtacactttc 34307315  T
Q  193 tcttt 197  Q
    |||||    
T  34307316 tcttt 34307320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 93 - 197
Target Start/End: Original strand, 17443825 - 17443929
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||| ||||||||| |||| |||||| |  ||||||||   || |||| |||| |||||| ||||||||||||| |||||||||  ||||| ||||||||    
T  17443825 gagttatgatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaagacactttc 17443924  T
Q  193 tcttt 197  Q
    |||||    
T  17443925 tcttt 17443929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 93 - 197
Target Start/End: Complemental strand, 24307893 - 24307789
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||| |||||||||  |||||||||| | |||||||| || |||||||||||| |||||| ||| |||| | ||  ||||||||| ||||  ||||||||    
T  24307893 gagttatgatacataaacacccttaggtggcaatacatcccttgacacccacacaaaaatctgatatgtggccatatggaccccgcacaagtacactttc 24307794  T
Q  193 tcttt 197  Q
    |||||    
T  24307793 tcttt 24307789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 197
Target Start/End: Original strand, 42221515 - 42221619
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    ||||||||||||||  ||| |||||| |  |||||||  | | |||||||||| |||||| ||||| ||| |||  |||||||| ||||| |||||||||    
T  42221515 gagtaatgatacatatacatccttaggtgacaatacattcctggacacccacacaaaaatctgacacgtaatcatatggaccccatacaagcacactttc 42221614  T
Q  193 tcttt 197  Q
    |||||    
T  42221615 tcttt 42221619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 135 - 202
Target Start/End: Original strand, 38229470 - 38229537
Alignment:
Q  135 tgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttctcttttctct 202  Q
    ||||||||||| |||||| |||||||| ||||||||||  | |||||| |||| ||||||||| ||||    
T  38229470 tgacacccacacaaaaatctgacatgtggtcacgtggattctgtacaagcacattttctctttcctct 38229537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 197
Target Start/End: Complemental strand, 16056471 - 16056397
Alignment:
Q  123 caatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttctcttt 197  Q
    ||||||| || |||||||||||| |||||| |||||||| | ||  ||||||||| ||||  |||||||||||||    
T  16056471 caatacatcccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctcttt 16056397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 161
Target Start/End: Original strand, 24307629 - 24307697
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgt 161  Q
    |||| |||||||||  |||||||||| | |||||||| || |||||||||||| |||||| ||| ||||    
T  24307629 gagttatgatacataaacacccttaggtggcaatacatccattgacacccacacaaaaatctgatatgt 24307697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 80; Significance: 1e-37; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 93 - 204
Target Start/End: Complemental strand, 8080483 - 8080372
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||||||||||||| ||||||||||| | |||||||||||||||||||| |||||||||| ||||| |||||||||||||||||| |||| |||||||||    
T  8080483 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 8080384  T
Q  193 tcttttctctcc 204  Q
    ||||||||||||    
T  8080383 tcttttctctcc 8080372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 91 - 204
Target Start/End: Original strand, 35137531 - 35137644
Alignment:
Q  91 atgagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactt 190  Q
    ||||||||||||| || ||||||||||| | |||||||||||||||||||||||| |||||| | ||| |||||||||||||||||| ||||||||||||    
T  35137531 atgagtaatgataaatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaaacacactt 35137630  T
Q  191 tctcttttctctcc 204  Q
    ||||||||||||||    
T  35137631 tctcttttctctcc 35137644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 93 - 204
Target Start/End: Complemental strand, 4999614 - 4999503
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||||||||||||| ||||||||||||| |||||||||| ||||||||||||| |||||| ||| | |||||||||||||||||| ||||||||||||||    
T  4999614 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgatacgtagtcacgtggaccccgcacaaacacactttc 4999515  T
Q  193 tcttttctctcc 204  Q
    |||||| |||||    
T  4999514 tcttttatctcc 4999503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 93 - 204
Target Start/End: Original strand, 7389389 - 7389500
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||||||||||||| ||||||||||| | ||||||||| |||||||||||||| |||||| ||||| |||||||||||||||||| |||| |||||||||    
T  7389389 gagtaatgatacatagacacccttaggtggcaatacactctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 7389488  T
Q  193 tcttttctctcc 204  Q
    ||||||||||||    
T  7389489 tcttttctctcc 7389500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 92 - 204
Target Start/End: Original strand, 38267039 - 38267151
Alignment:
Q  92 tgagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacacttt 191  Q
    ||||||||||||||| ||||||||||  |  ||||||||||||||||||||||| |||||| ||||| |||||||||||||||||| |||| ||||||||    
T  38267039 tgagtaatgatacatagacacccttatgtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 38267138  T
Q  192 ctcttttctctcc 204  Q
    |||||||||||||    
T  38267139 ctcttttctctcc 38267151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 91 - 204
Target Start/End: Original strand, 19329840 - 19329953
Alignment:
Q  91 atgagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactt 190  Q
    |||||||||||||||| |||| |||||| | |||||||||| ||||||||||||| |||||| ||||| ||| |||||||||||||| |||| |||||||    
T  19329840 atgagtaatgatacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcacactt 19329939  T
Q  191 tctcttttctctcc 204  Q
    ||||||||||||||    
T  19329940 tctcttttctctcc 19329953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 93 - 202
Target Start/End: Complemental strand, 36362013 - 36361904
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||||||||||||| ||||||||||| | |||||||| ||||||||||||||| |||||| ||||| |||||||||||||||||  |||| |||||||||    
T  36362013 gagtaatgatacatagacacccttaggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacactttc 36361914  T
Q  193 tcttttctct 202  Q
    ||||||||||    
T  36361913 tcttttctct 36361904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 93 - 204
Target Start/End: Original strand, 38837217 - 38837328
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||||||||||||| ||||||||||| | |||||||||||||  ||||| ||| |||||| ||||| |||||||||||||||||| |||| |||||||||    
T  38837217 gagtaatgatacatagacacccttaggtggcaatacacccttgtacacctacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 38837316  T
Q  193 tcttttctctcc 204  Q
    ||||||||||||    
T  38837317 tcttttctctcc 38837328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 93 - 203
Target Start/End: Original strand, 3434562 - 3434672
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||||||||||||| |||| |||||| | |||||||||||||||||||||||| |||||  ||||| ||||||||||||| |||| |||| |||||||||    
T  3434562 gagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaaactgacacgtagtcacgtggatcccgcacaagcacactttc 3434661  T
Q  193 tcttttctctc 203  Q
    |||||||||||    
T  3434662 tcttttctctc 3434672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 93 - 203
Target Start/End: Original strand, 40957707 - 40957817
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||||||||||||| ||||| ||||| | ||||||||| |||||| ||||||| |||||| ||||| ||||||||||||| ||||||||| |||||||||    
T  40957707 gagtaatgatacatagacactcttaggtggcaatacactctttgatacccacacaaaaatctgacacgtagtcacgtggatcccgtacaagcacactttc 40957806  T
Q  193 tcttttctctc 203  Q
    |||||||||||    
T  40957807 tcttttctctc 40957817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 93 - 202
Target Start/End: Original strand, 36362026 - 36362135
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||||||||||||| ||||||||||| | | |||||| ||||||||||||||| |||||| ||||| |||||||||||||||||  |||| |||||||||    
T  36362026 gagtaatgatacatagacacccttaggtggtaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacactttc 36362125  T
Q  193 tcttttctct 202  Q
    ||||||||||    
T  36362126 tcttttctct 36362135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 96 - 204
Target Start/End: Original strand, 3783998 - 3784106
Alignment:
Q  96 taatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttctct 195  Q
    ||||||||||| ||||||||||| | |||||||| | ||||||||||||| |||||| ||||| ||||||||||||| |||| |||| ||||||||||||    
T  3783998 taatgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctct 3784097  T
Q  196 tttctctcc 204  Q
    |||||||||    
T  3784098 tttctctcc 3784106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 94 - 204
Target Start/End: Complemental strand, 32951592 - 32951482
Alignment:
Q  94 agtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttct 193  Q
    ||||||||||||| ||||| |||||||  ||||||| ||||| ||| ||||| |||||| | ||| |||||||||||||||||| |||| ||||||||||    
T  32951592 agtaatgatacatagacactcttagatgacaatacatcctttaacatccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttct 32951493  T
Q  194 cttttctctcc 204  Q
    |||||||||||    
T  32951492 cttttctctcc 32951482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 93 - 202
Target Start/End: Complemental strand, 19436287 - 19436178
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||||||||||||| |||| |||||| |  ||||||||| ||||||||||||| |||||| ||||| ||||||||||||| |||| | || |||||||||    
T  19436287 gagtaatgatacatagacatccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcataagcacactttc 19436188  T
Q  193 tcttttctct 202  Q
    ||||||||||    
T  19436187 tcttttctct 19436178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 91 - 197
Target Start/End: Original strand, 8238210 - 8238317
Alignment:
Q  91 atgagtaatgatacattgacaccct-tagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacact 189  Q
    |||||| |||||||||  ||||||| ||| | |||||||||||||||||||||||| |||||| |||||||||||||  ||||||||| ||||  |||||    
T  8238210 atgagttatgatacataaacaccctgtaggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtcatatggaccccgcacaagtacact 8238309  T
Q  190 ttctcttt 197  Q
    ||||||||    
T  8238310 ttctcttt 8238317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 91 - 204
Target Start/End: Original strand, 3694365 - 3694478
Alignment:
Q  91 atgagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactt 190  Q
    |||| |||||||| ||  |||||||||| |  ||||||||| ||| ||||||||| |||||| ||||| ||||||| ||||| |||| |||| |||||||    
T  3694365 atgaataatgatatatacacacccttaggtgacaatacaccttttaacacccacacaaaaatctgacacgtagtcatgtggatcccgcacaagcacactt 3694464  T
Q  191 tctcttttctctcc 204  Q
    ||||||||||||||    
T  3694465 tctcttttctctcc 3694478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 93 - 197
Target Start/End: Complemental strand, 35468955 - 35468851
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||||||||||||| |||| |||||||| |||||||| | |||||||||||||||||||| | | ||||   || |||||||| | ||||||||||||||    
T  35468955 gagtaatgatacatagacatccttagatggcaatacatcatttgacacccacataaaaatctaatatgtgaccatgtggaccctgcacaaacacactttc 35468856  T
Q  193 tcttt 197  Q
    |||||    
T  35468855 tcttt 35468851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 91 - 196
Target Start/End: Original strand, 21234399 - 21234504
Alignment:
Q  91 atgagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactt 190  Q
    |||||| ||||||||| |||| |||||| |  |||||||||||||||||| |||| |||||||||||| |||| ||| || |||||| |||| |||| ||    
T  21234399 atgagttatgatacatagacatccttaggtgacaatacaccctttgacactcacacaaaaatttgacacgtagccacatgtaccccgcacaagcacattt 21234498  T
Q  191 tctctt 196  Q
    ||||||    
T  21234499 tctctt 21234504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 93 - 197
Target Start/End: Original strand, 38044197 - 38044301
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||| |||||||||  |||||||||| | ||||||||||| |||||| ||||| |||||| |||||||||| ||  ||||||||| ||||  ||||||||    
T  38044197 gagttatgatacataaacacccttaggtggcaatacaccccttgacatccacacaaaaatctgacatgtagccatatggaccccgcacaagtacactttc 38044296  T
Q  193 tcttt 197  Q
    |||||    
T  38044297 tcttt 38044301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 93 - 204
Target Start/End: Original strand, 36208173 - 36208284
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||| ||||||||| ||||||||||| | | ||||||  | |||||||||||| |||||  |||||||| ||||||||||||| | |||| |||| ||||    
T  36208173 gagttatgatacatagacacccttaggtggtaatacattcattgacacccacacaaaaagctgacatgtggtcacgtggaccctgcacaagcacattttc 36208272  T
Q  193 tcttttctctcc 204  Q
    ||||| ||||||    
T  36208273 tctttcctctcc 36208284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 93 - 197
Target Start/End: Original strand, 22343361 - 22343465
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||| |||||||||  |||||||||| | ||||||||||| |||||||||||| |||||| ||||||||   ||  ||||||||| ||||  ||||||||    
T  22343361 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtgaccatatggaccccgcacaagtacactttc 22343460  T
Q  193 tcttt 197  Q
    |||||    
T  22343461 tcttt 22343465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 93 - 197
Target Start/End: Complemental strand, 40846213 - 40846109
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||| |||||||||  ||| |||||| | ||||||||||| |||||| ||||| |||||| | ||||||||| |  ||||||||| ||||| ||||||||    
T  40846213 gagttatgatacataaacatccttaggtggcaatacaccccttgacatccacacaaaaatctaacatgtagttatatggaccccgcacaaatacactttc 40846114  T
Q  193 tcttt 197  Q
    |||||    
T  40846113 tcttt 40846109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 93 - 197
Target Start/End: Original strand, 41915741 - 41915845
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||| |||||||||  |||||||||| | ||||||||||| |||||||| ||| |||||| |||||||| | ||  ||||||||| ||||  ||||||||    
T  41915741 gagttatgatacataaacacccttaggtggcaatacaccccttgacacctacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 41915840  T
Q  193 tcttt 197  Q
    |||||    
T  41915841 tcttt 41915845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 93 - 204
Target Start/End: Complemental strand, 46033901 - 46033790
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||| ||||||||| || |  ||||| | |||||||||||||| |||||||||||||||| ||||| || ||||| || || ||| |||| || | ||||    
T  46033901 gagttatgatacatagatattcttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatgaactccgcacaagcatattttc 46033802  T
Q  193 tcttttctctcc 204  Q
    ||||||||||||    
T  46033801 tcttttctctcc 46033790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 92 - 197
Target Start/End: Complemental strand, 32564527 - 32564422
Alignment:
Q  92 tgagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacacttt 191  Q
    ||||| |||||||||  |||  ||||| | ||||||||||| |||||||||||| |||||| |||||||| |  |  ||||||||| ||||| |||||||    
T  32564527 tgagttatgatacataaacattcttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggctatatggaccccgcacaaatacacttt 32564428  T
Q  192 ctcttt 197  Q
    ||||||    
T  32564427 ctcttt 32564422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 203
Target Start/End: Original strand, 35522881 - 35522986
Alignment:
Q  98 atgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttctcttt 197  Q
    ||||||||| |||| |||||  | |||||||||| ||| ||||||||| |||||| ||||| || | ||  |||| |||| |||| ||||||||||||||    
T  35522881 atgatacatagacatccttaagtggcaatacaccatttaacacccacacaaaaatctgacacgtggccatatggatcccgcacaagcacactttctcttt 35522980  T
Q  198 tctctc 203  Q
    ||||||    
T  35522981 tctctc 35522986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 203
Target Start/End: Original strand, 11044188 - 11044288
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||||||||||||| ||||||||||| | |||||||| ||||||||||||           ||||| |||||||||||||||||| ||||  ||||||||    
T  11044188 gagtaatgatacatagacacccttaggtggcaatacatcctttgacaccc----------ctgacacgtagtcacgtggaccccgcacaagtacactttc 11044277  T
Q  193 tcttttctctc 203  Q
    ||||| |||||    
T  11044278 tctttcctctc 11044288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 193
Target Start/End: Original strand, 7727906 - 7728006
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||| |||||||||  |||||||||| | | ||||||||  ||||||  ||||||||||| |||||||| ||||  ||||||||| ||||  ||||||||    
T  7727906 gagttatgatacataaacacccttaggtggtaatacacctcttgacattcacataaaaatctgacatgtggtcatatggaccccgcacaagtacactttc 7728005  T
Q  193 t 193  Q
    |    
T  7728006 t 7728006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 93 - 204
Target Start/End: Original strand, 26296644 - 26296755
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||| ||||||||| |||| |||||| |  ||||| ||||||| ||| |||||||||||| ||| | || | ||  ||||||||| |||| | || ||||    
T  26296644 gagttatgatacatagacatccttaggtgacaatataccctttaacatccacataaaaatctgatacgtggccatatggaccccgcacaagcgcattttc 26296743  T
Q  193 tcttttctctcc 204  Q
    ||||||||||||    
T  26296744 tcttttctctcc 26296755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 2318338 - 2318261
Alignment:
Q  98 atgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccc 175  Q
    |||||||||| ||| || ||| | |||| |||||  |||||||||||| |||||| |||| ||| |||||||||||||    
T  2318338 atgatacattaacaaccataggtggcaagacacctcttgacacccacacaaaaatctgacgtgtggtcacgtggaccc 2318261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 93 - 158
Target Start/End: Complemental strand, 10343663 - 10343598
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgaca 158  Q
    |||||||||||||| ||||||||||| | | |||||||   |||||||||||| |||||| |||||    
T  10343663 gagtaatgatacatagacacccttaggtggaaatacacatcttgacacccacacaaaaatctgaca 10343598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 197
Target Start/End: Original strand, 18207180 - 18207283
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||| ||||||||| |||| |||||| | ||||||||||  |||||||||| | |||||| | ||| || | |||||| |||||  |||| |||||||||    
T  18207180 gagttatgatacatagacaaccttaggtggcaatacacctcttgacacccatacaaaaatctaacacgtgg-cacgtgaaccccacacaagcacactttc 18207278  T
Q  193 tcttt 197  Q
    |||||    
T  18207279 tcttt 18207283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 80; Significance: 1e-37; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 89 - 204
Target Start/End: Original strand, 32869674 - 32869789
Alignment:
Q  89 ttatgagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacac 188  Q
    |||||||||| ||||||| ||||||||||| | |||||||||||||||||||||||| |||||| ||||| |||||||||||||||||| |||| |||||    
T  32869674 ttatgagtaaagatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacac 32869773  T
Q  189 tttctcttttctctcc 204  Q
    ||||||||||||||||    
T  32869774 tttctcttttctctcc 32869789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 96 - 204
Target Start/End: Complemental strand, 22880755 - 22880647
Alignment:
Q  96 taatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttctct 195  Q
    ||||||||||| ||||||||||| | |||||||||||||||||||||||| |||| | ||||| |||||||||||||||||| |||| ||||||||||||    
T  22880755 taatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaattctgacacgtagtcacgtggaccccgcacaagcacactttctct 22880656  T
Q  196 tttctctcc 204  Q
    |||||||||    
T  22880655 tttctctcc 22880647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 91 - 204
Target Start/End: Original strand, 17598552 - 17598665
Alignment:
Q  91 atgagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactt 190  Q
    |||||||||||||||| ||||||||||| | |||||||| | ||||||||||||| |||||| ||||| || ||||||||||||||| |||| |||||||    
T  17598552 atgagtaatgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacgttgtcacgtggaccccgcacaagcacactt 17598651  T
Q  191 tctcttttctctcc 204  Q
    ||||||||||||||    
T  17598652 tctcttttctctcc 17598665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 93 - 204
Target Start/End: Original strand, 11427616 - 11427729
Alignment:
Q  93 gagtaatgatacattgacaccct--tagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactt 190  Q
    |||||||||||||| ||||||||  ||| | |||||||| ||||||||||||||| |||||| ||||| ||||||||||||| |||| |||| |||||||    
T  11427616 gagtaatgatacatagacaccctcttaggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactt 11427715  T
Q  191 tctcttttctctcc 204  Q
    ||||||||||||||    
T  11427716 tctcttttctctcc 11427729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 93 - 204
Target Start/End: Complemental strand, 6209565 - 6209454
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||||||||||||| ||||||||||| | |||||||||  |||||||| |||| |||||| || || |||||||||||||||||| || | |||||||||    
T  6209565 gagtaatgatacatagacacccttaggtggcaatacactatttgacactcacacaaaaatctgtcacgtagtcacgtggaccccgcactagcacactttc 6209466  T
Q  193 tcttttctctcc 204  Q
    ||||||||||||    
T  6209465 tcttttctctcc 6209454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 93 - 202
Target Start/End: Original strand, 29857827 - 29857936
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||||||||||||| |||||| |||||| |||||||||| ||| ||||||||| |||||| ||||| ||||| ||||||| |||| | || |||||||||    
T  29857827 gagtaatgatacatagacacctttagatggcaatacaccttttaacacccacacaaaaatctgacacgtagttacgtggatcccgcataagcacactttc 29857926  T
Q  193 tcttttctct 202  Q
    ||||||||||    
T  29857927 tcttttctct 29857936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 92 - 204
Target Start/End: Complemental strand, 31109501 - 31109389
Alignment:
Q  92 tgagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacacttt 191  Q
    |||||||||||  || ||||||||||| | |||||||||||||||||| ||||| |||||| ||||| |||||||||| ||||||| | ||  |||||||    
T  31109501 tgagtaatgattaatagacacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcacgtagaccccgcaaaagtacacttt 31109402  T
Q  192 ctcttttctctcc 204  Q
    |||||||||||||    
T  31109401 ctcttttctctcc 31109389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 91 - 197
Target Start/End: Complemental strand, 31953132 - 31953026
Alignment:
Q  91 atgagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactt 190  Q
    ||||||||||||| || |||| |||||| | ||||||||||| ||||||||||||||||||| ||||||||  ||| ||||||| |  ||||||||||||    
T  31953132 atgagtaatgatagatagacatccttaggtggcaatacaccccttgacacccacataaaaatctgacatgtgttcatgtggacctcacacaaacacactt 31953033  T
Q  191 tctcttt 197  Q
    |||||||    
T  31953032 tctcttt 31953026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 93 - 204
Target Start/End: Original strand, 31976248 - 31976359
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||| ||||||||| |||| |||||| | |||||| ||||||| ||||||||| |||||| ||||| || ||||| || |||||| |||| |||||||||    
T  31976248 gagttatgatacatagacatccttaggtggcaatataccctttaacacccacacaaaaatctgacacgtggtcacatgaaccccgcacaagcacactttc 31976347  T
Q  193 tcttttctctcc 204  Q
    ||||||||||||    
T  31976348 tcttttctctcc 31976359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 124 - 204
Target Start/End: Complemental strand, 23128196 - 23128116
Alignment:
Q  124 aatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttctcttttctctcc 204  Q
    |||||| ||||||||||||||| |||||| ||||| ||||||||||||| |||  |||| |||||||||||||||||||||    
T  23128196 aatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaagcacactttctcttttctctcc 23128116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 93 - 204
Target Start/End: Original strand, 15832577 - 15832688
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||||||||||||| |||||| |||| |  ||||| | | ||||||||||||| |||||||||||| ||||||||||||| || | ||||| ||| ||||    
T  15832577 gagtaatgatacatagacacctttaggtgacaataaatcatttgacacccacacaaaaatttgacacgtagtcacgtggatcctgcacaaatacattttc 15832676  T
Q  193 tcttttctctcc 204  Q
    |||||| |||||    
T  15832677 tcttttttctcc 15832688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 92 - 197
Target Start/End: Complemental strand, 15508125 - 15508020
Alignment:
Q  92 tgagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacacttt 191  Q
    ||||| |||||||||  |||||||||| | ||||||||||| |||||||||||| |||||| |||||||| | ||  ||||||||| ||||  |||||||    
T  15508125 tgagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 15508026  T
Q  192 ctcttt 197  Q
    ||||||    
T  15508025 ctcttt 15508020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 93 - 197
Target Start/End: Complemental strand, 15990142 - 15990038
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||| |||||||||  |||||||||| | ||||||||||| |||||||||||| |||||| |||||||| | ||  ||||||||| ||||  ||||||||    
T  15990142 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 15990043  T
Q  193 tcttt 197  Q
    |||||    
T  15990042 tcttt 15990038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 93 - 197
Target Start/End: Complemental strand, 30341460 - 30341356
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||| |||||||||  |||||||||| | ||||||||||| |||||||||||| |||||| |||||||| | ||  ||||||||| ||||  ||||||||    
T  30341460 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 30341361  T
Q  193 tcttt 197  Q
    |||||    
T  30341360 tcttt 30341356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 93 - 202
Target Start/End: Complemental strand, 31110859 - 31110752
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||| ||||||||| |||| |||||| | ||||||||||||||||||| |||  |||||| ||||| |||  ||| ||||||| | |||| |||||||||    
T  31110859 gagttatgatacatagacatccttaggtggcaatacaccctttgacactcac--aaaaatctgacacgtaaccacatggaccctgcacaagcacactttc 31110762  T
Q  193 tcttttctct 202  Q
    ||||||||||    
T  31110761 tcttttctct 31110752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 97 - 198
Target Start/End: Complemental strand, 28536582 - 28536483
Alignment:
Q  97 aatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttctctt 196  Q
    ||||||||||  ||| |||||| | |||||||| || |||||||||||| |||||| ||||| |  |||| |||||||||  |||| |||||||||||||    
T  28536582 aatgatacataaacatccttaggtggcaatacaacccttgacacccacacaaaaatctgacacg--gtcatgtggaccccacacaagcacactttctctt 28536485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 98 - 197
Target Start/End: Complemental strand, 9379807 - 9379708
Alignment:
Q  98 atgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttctcttt 197  Q
    ||||||||| |||| ||||||||  ||||||| || |||||||||| | |||||||||||| || | || ||||| | |  ||||||||| |||||||||    
T  9379807 atgatacatagacatccttagatgacaatacatcccttgacacccatacaaaaatttgacacgtggccatgtggatctcacacaaacacattttctcttt 9379708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 204
Target Start/End: Original strand, 946377 - 946487
Alignment:
Q  94 agtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttct 193  Q
    ||||| ||||||| |||| |||||| |   |||||||||||||||||| ||  |||||| |||||  |||||||||  | ||||  | | ||||||||||    
T  946377 agtaacgatacatagacatccttaggtgataatacaccctttgacacctacccaaaaatctgacacctagtcacgtaaatcccgctctagcacactttct 946476  T
Q  194 cttttctctcc 204  Q
    |||||||||||    
T  946477 cttttctctcc 946487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 80; Significance: 1e-37; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 89 - 204
Target Start/End: Complemental strand, 33149742 - 33149627
Alignment:
Q  89 ttatgagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacac 188  Q
    |||||||||||||||||| ||||||||||| | | |||||||||||||||||||||| |||||||||||| ||||||||||||| |||| |||| |||||    
T  33149742 ttatgagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcacac 33149643  T
Q  189 tttctcttttctctcc 204  Q
    ||||||||||||||||    
T  33149642 tttctcttttctctcc 33149627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 93 - 204
Target Start/End: Complemental strand, 36733042 - 36732931
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||| |||||| |||||  ||||||||||||||||| |||| |||||||||    
T  36733042 gagtaatgatacatagacacccttaggtagcaatacaccctttgacacccacacaaaaatctgacacatagtcacgtggaccccgcacaagcacactttc 36732943  T
Q  193 tcttttctctcc 204  Q
    ||||||||||||    
T  36732942 tcttttctctcc 36732931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 90 - 204
Target Start/End: Original strand, 40145404 - 40145518
Alignment:
Q  90 tatgagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacact 189  Q
    ||||||||||||||||| ||||||||||| | |||||||||||||| ||| ||||| |||||| ||||| |||||||||||||||||| |||| ||||||    
T  40145404 tatgagtaatgatacatagacacccttaggtggcaatacaccctttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 40145503  T
Q  190 ttctcttttctctcc 204  Q
    |||||||||||||||    
T  40145504 ttctcttttctctcc 40145518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 96 - 204
Target Start/End: Complemental strand, 18520981 - 18520873
Alignment:
Q  96 taatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttctct 195  Q
    ||||||||||| ||||||||||| | |||||||||||||||||||||||| |||||| ||||| |||||||||||||||||| |||| ||||||||||||    
T  18520981 taatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 18520882  T
Q  196 tttctctcc 204  Q
    ||| |||||    
T  18520881 tttatctcc 18520873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 93 - 204
Target Start/End: Original strand, 2740274 - 2740385
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||||||||||||| |||| |||||| | |||||||||||||||||||||||| |||||| ||||| ||||||||||||| |||| |||| |||||||||    
T  2740274 gagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 2740373  T
Q  193 tcttttctctcc 204  Q
    ||||||||||||    
T  2740374 tcttttctctcc 2740385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 91 - 204
Target Start/End: Original strand, 14831812 - 14831925
Alignment:
Q  91 atgagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactt 190  Q
    |||||||||||||||| ||||| ||||| | ||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||| |||| |||||||    
T  14831812 atgagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactt 14831911  T
Q  191 tctcttttctctcc 204  Q
    ||| |||| |||||    
T  14831912 tcttttttttctcc 14831925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 91 - 204
Target Start/End: Original strand, 28177773 - 28177886
Alignment:
Q  91 atgagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactt 190  Q
    |||||| ||||||||| |||| |||||| | |||||||||||||||||||||||| |||||| ||||| || ||||| ||||||||| ||||||||||||    
T  28177773 atgagttatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacacactt 28177872  T
Q  191 tctcttttctctcc 204  Q
    ||||||||||||||    
T  28177873 tctcttttctctcc 28177886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 92 - 203
Target Start/End: Original strand, 35785198 - 35785309
Alignment:
Q  92 tgagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacacttt 191  Q
    ||||||||||||||| ||||||||||| | |||||||||| ||||||||||||| |||||| ||||| ||||| ||||||| |||| |||| ||||||||    
T  35785198 tgagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggatcccgcacaatcacacttt 35785297  T
Q  192 ctcttttctctc 203  Q
    ||||||||||||    
T  35785298 ctcttttctctc 35785309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 93 - 204
Target Start/End: Original strand, 13811652 - 13811763
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||||| ||||||| ||||||||||| | |||||||| | ||||||||||||| |||||| ||||| |||||||||||||||||| |||| |||||||||    
T  13811652 gagtaaagatacatagacacccttaggtggcaatacatcatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 13811751  T
Q  193 tcttttctctcc 204  Q
    |||| |||||||    
T  13811752 tcttctctctcc 13811763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 91 - 200
Target Start/End: Complemental strand, 42414404 - 42414295
Alignment:
Q  91 atgagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactt 190  Q
    |||||||||||||||| ||||||  ||| | |||||||||||||||||||||||| |||||| ||||| ||||||| |||||||||| |||| |||||||    
T  42414404 atgagtaatgatacatagacaccagtaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactt 42414305  T
Q  191 tctcttttct 200  Q
    | ||||||||    
T  42414304 tatcttttct 42414295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 93 - 204
Target Start/End: Original strand, 6679698 - 6679809
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||| ||||||||| |||| | |||| | |||||||||| ||||||||||||| |||||| ||||| || ||||| ||||||||| ||||||||| ||||    
T  6679698 gagttatgatacatagacatctttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacacattttc 6679797  T
Q  193 tcttttctctcc 204  Q
    ||||||||||||    
T  6679798 tcttttctctcc 6679809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 8 - 80
Target Start/End: Complemental strand, 8338812 - 8338734
Alignment:
Q  8 cttcaagagcagagtgagcagcccttacctttctat------accttcttttttccatttcttactagtttttcgtgcc 80  Q
    |||||||||||||||||| |||||||||||||||||      |||||||||||||||||||||||||||||||||||||    
T  8338812 cttcaagagcagagtgagtagcccttacctttctatgtctataccttcttttttccatttcttactagtttttcgtgcc 8338734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 93 - 204
Target Start/End: Complemental strand, 35943992 - 35943881
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||| ||||||||| ||||||||||| | |||||||| | ||||||||||||| |||||| ||||| ||||| ||||||| |||  |||| |||||||||    
T  35943992 gagttatgatacatagacacccttaggtggcaatacatcatttgacacccacacaaaaatctgacacgtagttacgtggatcccacacaagcacactttc 35943893  T
Q  193 tcttttctctcc 204  Q
    ||||| ||||||    
T  35943892 tctttcctctcc 35943881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 93 - 204
Target Start/End: Complemental strand, 15409710 - 15409599
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||| ||||||||| |||| |||||| |  |||||||  |||||||||||||| |||||| ||||| |||| ||| ||||||||| |||| |||||| ||    
T  15409710 gagttatgatacatagacatccttaggtgacaatacattctttgacacccacacaaaaatctgacacgtagccacatggaccccgcacaagcacactctc 15409611  T
Q  193 tcttttctctcc 204  Q
    ||||||||||||    
T  15409610 tcttttctctcc 15409599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 92 - 202
Target Start/End: Original strand, 26720515 - 26720625
Alignment:
Q  92 tgagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacacttt 191  Q
    ||||| ||||||||| |||| |||||| | |||||||||||||| ||||| ||| |||||| ||||| || | ||| |||| |||| |||| ||||||||    
T  26720515 tgagttatgatacatagacatccttaggtggcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcacacttt 26720614  T
Q  192 ctcttttctct 202  Q
    |||||||||||    
T  26720615 ctcttttctct 26720625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 92 - 202
Target Start/End: Original strand, 26990264 - 26990374
Alignment:
Q  92 tgagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacacttt 191  Q
    ||||| ||||||||| |||| |||||| | |||||||||||||| ||||| ||| |||||| ||||| || | ||| |||| |||| |||| ||||||||    
T  26990264 tgagttatgatacatagacatccttaggtggcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcacacttt 26990363  T
Q  192 ctcttttctct 202  Q
    |||||||||||    
T  26990364 ctcttttctct 26990374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 94 - 204
Target Start/End: Complemental strand, 36875702 - 36875601
Alignment:
Q  94 agtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttct 193  Q
    ||||||||||||| ||||||||||| | |||||||||||||||||||||||| |||||         |||||||||||| |||| |||| ||||||||||    
T  36875702 agtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaa---------tagtcacgtggatcccgcacaagcacactttct 36875612  T
Q  194 cttttctctcc 204  Q
    ||||| |||||    
T  36875611 cttttttctcc 36875601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 93 - 197
Target Start/End: Complemental strand, 3921365 - 3921261
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||| |||||||||  |||||||||| | ||||||||||| |||||||||||| |||||| |||||||| | ||  ||||||||| ||||  ||||||||    
T  3921365 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 3921266  T
Q  193 tcttt 197  Q
    |||||    
T  3921265 tcttt 3921261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 93 - 197
Target Start/End: Complemental strand, 2252268 - 2252164
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||| |||||||||  ||| |||||| | ||||||||||| |||||||||||| |||||| |||||||| | ||  ||||||||| ||||  ||||||||    
T  2252268 gagttatgatacataaacatccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 2252169  T
Q  193 tcttt 197  Q
    |||||    
T  2252168 tcttt 2252164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 137 - 203
Target Start/End: Original strand, 21370048 - 21370114
Alignment:
Q  137 acacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttctcttttctctc 203  Q
    ||||||||  |||||| |||||||| ||||||||||||||| ||||||||| ||||||||| |||||    
T  21370048 acacccactcaaaaatctgacatgtggtcacgtggaccccgcacaaacacattttctctttcctctc 21370114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 204
Target Start/End: Complemental strand, 20073616 - 20073505
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    ||||||||||| || |||| | ||||||  |||||||||||||||||| ||||||||||| |  || ||   ||||||||||| | |||| |||||||||    
T  20073616 gagtaatgatatatagacatcattagatgacaatacaccctttgacactcacataaaaatcttgcacgtgaccacgtggaccctgcacaagcacactttc 20073517  T
Q  193 tcttttctctcc 204  Q
    | ||| ||||||    
T  20073516 tatttcctctcc 20073505  T

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Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 141 - 203
Target Start/End: Original strand, 31132392 - 31132454
Alignment:
Q  141 ccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttctcttttctctc 203  Q
    ||||| |||||| ||||| |||||||||||||||||| |||| || ||||| |||||||||||    
T  31132392 ccacacaaaaatctgacaagtagtcacgtggaccccgcacaagcatactttttcttttctctc 31132454  T

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Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 202
Target Start/End: Original strand, 31009032 - 31009097
Alignment:
Q  137 acacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttctcttttctct 202  Q
    ||||||||| |||||| ||||| ||||||||||||| |||| |||| |||||||||| ||| ||||    
T  31009032 acacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctatttcctct 31009097  T

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Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 182
Target Start/End: Complemental strand, 41470516 - 41470427
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaa 182  Q
    ||||||| |||||| |||||| |||| | |||||||| ||||| | |  || |||||||| ||||| |||||||||||||||||| ||||    
T  41470516 gagtaataatacatagacacctttaggtggcaatacatcctttaaaattcatataaaaatctgacacgtagtcacgtggaccccgcacaa 41470427  T

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Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 93 - 158
Target Start/End: Complemental strand, 33825424 - 33825359
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgaca 158  Q
    |||||||||| ||| ||||  ||||| | ||||||||| | ||||||||||||||||||| |||||    
T  33825424 gagtaatgatgcatagacattcttaggtggcaatacactccttgacacccacataaaaatctgaca 33825359  T

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Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 204
Target Start/End: Complemental strand, 39557586 - 39557506
Alignment:
Q  124 aatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttctcttttctctcc 204  Q
    ||||||||  || ||| ||||| |||||| ||||| ||  |||| |||||||| ||||| ||||||||||||||| |||||    
T  39557586 aatacacctcttaacatccacacaaaaatctgacacgtgatcacatggaccccatacaatcacactttctcttttatctcc 39557506  T

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Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 197
Target Start/End: Complemental strand, 39688997 - 39688893
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||| |||||||||  |||||||||  | |||||||| || |||||||||||| |||||| ||| |||| ||||  || |||||| | ||  ||||||||    
T  39688997 gagttatgatacataaacacccttaagtggcaatacatcccttgacacccacacaaaaatctgatatgtggtcatatgaaccccgcataagtacactttc 39688898  T
Q  193 tcttt 197  Q
    |||||    
T  39688897 tcttt 39688893  T

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Target: scaffold0321 (Bit Score: 68; Significance: 1e-30; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 93 - 204
Target Start/End: Complemental strand, 10209 - 10098
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||| ||||||||| |||||| |||| | |||||||| ||||||||| |||||||||||| ||||| ||||||||||||||| ||||||| |||||||||    
T  10209 gagttatgatacatagacacctttaggtggcaatacatcctttgacatccacataaaaatctgacacgtagtcacgtggaccgcgtacaagcacactttc 10110  T
Q  193 tcttttctctcc 204  Q
    ||||||||||||    
T  10109 tcttttctctcc 10098  T

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Target: scaffold0237 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 93 - 202
Target Start/End: Original strand, 4029 - 4138
Alignment:
Q  93 gagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttc 192  Q
    |||||||||||||| |||||| |||||| |||||||||| ||| ||||||||| |||||| ||||| ||||| ||||||| |||| | || |||||||||    
T  4029 gagtaatgatacatagacacctttagatggcaatacaccttttaacacccacacaaaaatctgacacgtagttacgtggatcccgcataagcacactttc 4128  T
Q  193 tcttttctct 202  Q
    ||||||||||    
T  4129 tcttttctct 4138  T

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Target: scaffold1268 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 91 - 204
Target Start/End: Complemental strand, 1031 - 918
Alignment:
Q  91 atgagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactt 190  Q
    |||||||||||||||| |||| | |||| | |||||||||||||| ||| ||||| |||||  ||||| ||||||||||| | |||| |||| |||||||    
T  1031 atgagtaatgatacatagacatctttaggtggcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcacactt 932  T
Q  191 tctcttttctctcc 204  Q
    ||||||| ||||||    
T  931 tctctttcctctcc 918  T

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Target: scaffold1267 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 91 - 204
Target Start/End: Complemental strand, 1031 - 918
Alignment:
Q  91 atgagtaatgatacattgacacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactt 190  Q
    |||||||||||||||| |||| | |||| | |||||||||||||| ||| ||||| |||||  ||||| ||||||||||| | |||| |||| |||||||    
T  1031 atgagtaatgatacatagacatctttaggtggcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcacactt 932  T
Q  191 tctcttttctctcc 204  Q
    ||||||| ||||||    
T  931 tctctttcctctcc 918  T

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Target: scaffold0018 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 109 - 197
Target Start/End: Original strand, 152514 - 152602
Alignment:
Q  109 acacccttagatagcaatacaccctttgacacccacataaaaatttgacatgtagtcacgtggaccccgtacaaacacactttctcttt 197  Q
    |||||||| | | ||||||||||| |||||||||||| |||||| |||||||| ||||  |||| |||| ||||| |||||||||||||    
T  152514 acacccttgggtggcaatacaccccttgacacccacacaaaaatctgacatgtggtcatatggatcccgcacaaatacactttctcttt 152602  T

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