View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5215_low_12 (Length: 240)

Name: NF5215_low_12
Description: NF5215
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5215_low_12
NF5215_low_12
[»] chr1 (19 HSPs)
chr1 (17-139)||(33981200-33981322)
chr1 (155-240)||(8177154-8177240)
chr1 (155-240)||(2799880-2799966)
chr1 (155-240)||(33700745-33700831)
chr1 (155-240)||(36371488-36371574)
chr1 (176-240)||(40810506-40810571)
chr1 (155-240)||(8904432-8904518)
chr1 (155-228)||(21547464-21547538)
chr1 (155-238)||(9165169-9165253)
chr1 (155-228)||(6650613-6650687)
chr1 (155-240)||(15786293-15786378)
chr1 (187-240)||(33981135-33981189)
chr1 (155-240)||(51703797-51703883)
chr1 (158-214)||(24047100-24047157)
chr1 (188-240)||(29753700-29753753)
chr1 (203-240)||(32524398-32524435)
chr1 (162-229)||(1600275-1600343)
chr1 (204-240)||(3679286-3679322)
chr1 (158-229)||(51814515-51814587)
[»] chr3 (10 HSPs)
chr3 (155-240)||(46518646-46518732)
chr3 (155-240)||(30311324-30311410)
chr3 (155-240)||(27093334-27093419)
chr3 (155-240)||(53412963-53413049)
chr3 (175-231)||(8796074-8796131)
chr3 (161-240)||(27259185-27259265)
chr3 (158-240)||(15048033-15048116)
chr3 (156-240)||(28703376-28703461)
chr3 (157-217)||(36720401-36720462)
chr3 (154-237)||(40063636-40063720)
[»] chr6 (7 HSPs)
chr6 (155-240)||(12188275-12188361)
chr6 (157-240)||(15951274-15951358)
chr6 (175-240)||(13330125-13330191)
chr6 (155-225)||(1056672-1056743)
chr6 (155-228)||(3779357-3779431)
chr6 (176-240)||(11306146-11306211)
chr6 (157-228)||(33549124-33549196)
[»] chr4 (10 HSPs)
chr4 (155-240)||(37109323-37109409)
chr4 (155-240)||(38869786-38869872)
chr4 (155-240)||(4249195-4249281)
chr4 (155-240)||(16581711-16581797)
chr4 (153-240)||(23377972-23378060)
chr4 (155-230)||(31759640-31759716)
chr4 (155-240)||(7292770-7292856)
chr4 (168-229)||(51969048-51969110)
chr4 (204-240)||(2185004-2185040)
chr4 (204-240)||(15180806-15180842)
[»] chr2 (6 HSPs)
chr2 (155-240)||(13803513-13803599)
chr2 (155-240)||(30410521-30410607)
chr2 (155-229)||(1435082-1435156)
chr2 (155-240)||(14500295-14500381)
chr2 (175-238)||(21303968-21304032)
chr2 (155-240)||(40416362-40416448)
[»] chr5 (11 HSPs)
chr5 (154-240)||(37258338-37258425)
chr5 (155-229)||(43442214-43442289)
chr5 (155-240)||(25627075-25627160)
chr5 (176-240)||(14285200-14285265)
chr5 (155-238)||(26078025-26078109)
chr5 (165-240)||(31074260-31074336)
chr5 (155-237)||(34984824-34984907)
chr5 (155-240)||(18595973-18596059)
chr5 (155-228)||(29075799-29075873)
chr5 (157-228)||(16773827-16773899)
chr5 (157-193)||(24652888-24652924)
[»] scaffold0063 (1 HSPs)
scaffold0063 (156-237)||(35364-35446)
[»] chr7 (13 HSPs)
chr7 (153-230)||(25655210-25655288)
chr7 (155-240)||(26459382-26459468)
chr7 (155-240)||(39631862-39631948)
chr7 (155-240)||(43215202-43215288)
chr7 (155-240)||(18363714-18363799)
chr7 (175-228)||(27313718-27313772)
chr7 (155-240)||(35119401-35119487)
chr7 (155-231)||(11700183-11700259)
chr7 (157-240)||(29785273-29785357)
chr7 (155-240)||(33222388-33222474)
chr7 (167-240)||(37162322-37162396)
chr7 (203-240)||(17113862-17113899)
chr7 (161-228)||(11735462-11735530)
[»] scaffold0194 (1 HSPs)
scaffold0194 (157-229)||(13029-13102)
[»] chr8 (8 HSPs)
chr8 (155-238)||(18540316-18540400)
chr8 (157-229)||(35287736-35287809)
chr8 (155-240)||(6569743-6569829)
chr8 (155-240)||(12988446-12988531)
chr8 (156-229)||(13129687-13129761)
chr8 (155-228)||(35690048-35690122)
chr8 (158-227)||(11942864-11942933)
chr8 (157-228)||(968382-968454)
[»] scaffold0118 (1 HSPs)
scaffold0118 (155-229)||(41616-41691)
[»] scaffold0126 (1 HSPs)
scaffold0126 (155-230)||(25329-25405)
[»] scaffold0006 (1 HSPs)
scaffold0006 (153-231)||(18315-18394)
[»] scaffold0180 (1 HSPs)
scaffold0180 (155-240)||(19935-20020)
[»] scaffold0238 (1 HSPs)
scaffold0238 (166-230)||(2693-2758)
[»] scaffold0172 (1 HSPs)
scaffold0172 (157-198)||(15792-15833)
[»] scaffold0258 (1 HSPs)
scaffold0258 (157-228)||(15307-15379)
[»] scaffold0086 (1 HSPs)
scaffold0086 (157-212)||(47402-47458)


Alignment Details
Target: chr1 (Bit Score: 68; Significance: 2e-30; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 33981322 - 33981200
Alignment:
Q  17 aaaagcattttgaaaaatagtattttcaacaataataatgttctaatgagaatgttattcga-nnnnnnnnnnnnaataatatatcctgtttatttgtaa 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||             ||||||||| |||||||||||||||    
T  33981322 aaaagcattttgaaaaatagtattttcaacaataataatgttctaa-gagaatgttattcgatttttttttttttaataatataacctgtttatttgtaa 33981224  T
Q  116 taatgcttattggctatgttaata 139  Q
    ||||||||||||||||||||||||    
T  33981223 taatgcttattggctatgttaata 33981200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 8177240 - 8177154
Alignment:
Q  155 tagtggtattggcttgagatttgggagtatgttcctcctcaaggattca-gttcgattctctctgatgccaatttgagagggttagt 240  Q
    |||||||||||||||| ||| ||||||| || |||||||||||| |||| ||||||||||||||| |||||||||||| ||||||||    
T  8177240 tagtggtattggcttgggatctgggagtgtgctcctcctcaaggtttcaggttcgattctctctggtgccaatttgagggggttagt 8177154  T

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Target: chr1; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 2799880 - 2799966
Alignment:
Q  155 tagtggtattggcttgagatttgggagtatgttcctcctcaaggattcag-ttcgattctctctgatgccaatttgagagggttagt 240  Q
    ||||||||| |||||||||| ||||||| || ||||||||||||  |||| |||||||||||||| |||||||||||| ||||||||    
T  2799880 tagtggtataggcttgagatctgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaatttgagggggttagt 2799966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 33700831 - 33700745
Alignment:
Q  155 tagtggtattggcttgagatttgggagtatgttcctcctcaaggattcag-ttcgattctctctgatgccaatttgagagggttagt 240  Q
    ||||||||||||||||  || ||||||| || ||||||||||||  |||| |||||||||||||| ||||||||| || ||||||||    
T  33700831 tagtggtattggcttggaatctgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaatttaagggggttagt 33700745  T

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Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 36371488 - 36371574
Alignment:
Q  155 tagtggtattggcttgagatttgggagtatgttcctcctcaaggattcag-ttcgattctctctgatgccaatttgagagggttagt 240  Q
    ||||||||||||||||  |  ||||||| || ||||||||||||  | || ||||||||||||||||||||||||||| ||||||||    
T  36371488 tagtggtattggcttggaacctgggagtgtgctcctcctcaaggtctgaggttcgattctctctgatgccaatttgagggggttagt 36371574  T

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Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 240
Target Start/End: Original strand, 40810506 - 40810571
Alignment:
Q  176 tgggagtatgttcctcctcaaggattcag-ttcgattctctctgatgccaatttgagagggttagt 240  Q
    ||||||| |||||||| ||||||  |||| |||||||||||||| |||||||||||||||||||||    
T  40810506 tgggagtgtgttcctcttcaaggtctcaggttcgattctctctggtgccaatttgagagggttagt 40810571  T

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Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 8904432 - 8904518
Alignment:
Q  155 tagtggtattggcttgagatttgggagtatgttcctcctcaaggattca-gttcgattctctctgatgccaatttgagagggttagt 240  Q
    |||| |||||| |||| ||| || |||| || ||||||||||||  ||| ||||||||||||||| |||||||||||| ||||||||    
T  8904432 tagtagtattgacttgggatatgtgagtgtgctcctcctcaaggtctcaagttcgattctctctggtgccaatttgagggggttagt 8904518  T

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Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 155 - 228
Target Start/End: Complemental strand, 21547538 - 21547464
Alignment:
Q  155 tagtggtattggcttgagatttgggagtatgttcctcctcaaggattcag-ttcgattctctctgatgccaattt 228  Q
    |||||||||||||||| ||  ||||||  || |||||||| ||| ||||| ||||||||||||||||||||||||    
T  21547538 tagtggtattggcttgggacatgggagggtgctcctcctcgaggtttcaggttcgattctctctgatgccaattt 21547464  T

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Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 238
Target Start/End: Complemental strand, 9165253 - 9165169
Alignment:
Q  155 tagtggtattggcttgagatttgggagtatgttcctcctcaaggattcag-ttcgattctctctgatgccaatttgagagggtta 238  Q
    |||||||||||||||| ||  ||||||| || |||||||||| |  |||| ||| |||||||||| |||||||||||| ||||||    
T  9165253 tagtggtattggcttgggacctgggagtgtgctcctcctcaaagtctcaggttcaattctctctggtgccaatttgagggggtta 9165169  T

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Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 228
Target Start/End: Original strand, 6650613 - 6650687
Alignment:
Q  155 tagtggtattggcttgagatttgggagtatgttcctcctcaaggattca-gttcgattctctctgatgccaattt 228  Q
    |||||||||||||||| |||  ||||||||| |||||||||| |  ||| ||||||||||||||| || ||||||    
T  6650613 tagtggtattggcttgggatcggggagtatgctcctcctcaatgtctcaggttcgattctctctggtgtcaattt 6650687  T

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Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 15786378 - 15786293
Alignment:
Q  155 tagtggtattggcttgagatttgggagtatgttcctcctcaaggattca-gttcgattctctctgatgccaatttgagagggttagt 240  Q
    |||| ||||||||||| ||| ||||||| || ||||||||||||  ||| |||||||||||| || || ||||||||| ||||||||    
T  15786378 tagtagtattggcttgggatctgggagtgtgctcctcctcaaggtctcaggttcgattctctttggtgtcaatttgag-gggttagt 15786293  T

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Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 240
Target Start/End: Complemental strand, 33981189 - 33981135
Alignment:
Q  187 tcctcctcaaggattcag-ttcgattctctctgatgccaatttgagagggttagt 240  Q
    ||||||||||| |||||| ||||||||||||||||||  ||||||| ||||||||    
T  33981189 tcctcctcaagaattcaggttcgattctctctgatgctcatttgagggggttagt 33981135  T

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Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 51703797 - 51703883
Alignment:
Q  155 tagtggtattggcttgagatttgggagtatgttcctcctcaaggattca-gttcgattctctctgatgccaatttgagagggttagt 240  Q
    ||||||||||||||||  || ||||||| || |||||||||| | |||| ||||||||||||||| |  |||||| ||| |||||||    
T  51703797 tagtggtattggcttggaatctgggagtgtgctcctcctcaaagtttcaggttcgattctctctggtatcaatttaagacggttagt 51703883  T

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Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 214
Target Start/End: Complemental strand, 24047157 - 24047100
Alignment:
Q  158 tggtattggcttgagatttgggagtatgttcctcctcaaggattc-agttcgattctc 214  Q
    |||||||||||||||| |||||||| || |||||||| ||| ||| ||||||||||||    
T  24047157 tggtattggcttgagacttgggagtgtgctcctcctcgaggtttcaagttcgattctc 24047100  T

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Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 188 - 240
Target Start/End: Original strand, 29753700 - 29753753
Alignment:
Q  188 cctcctcaaggattcag-ttcgattctctctgatgccaatttgagagggttagt 240  Q
    |||||||||||  |||| |||||||||||||| ||||||||| |||||||||||    
T  29753700 cctcctcaaggtctcaggttcgattctctctggtgccaatttaagagggttagt 29753753  T

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Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 203 - 240
Target Start/End: Original strand, 32524398 - 32524435
Alignment:
Q  203 agttcgattctctctgatgccaatttgagagggttagt 240  Q
    |||||||||||||||| |||||||||||| ||||||||    
T  32524398 agttcgattctctctggtgccaatttgagggggttagt 32524435  T

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Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 229
Target Start/End: Complemental strand, 1600343 - 1600275
Alignment:
Q  162 attggcttgagatttgggagtatgttcctcctcaaggattca-gttcgattctctctgatgccaatttg 229  Q
    |||||| |||||||||||||| || ||||||| || | |||| ||||||||||||||| || |||||||    
T  1600343 attggcctgagatttgggagtgtgctcctccttaaagtttcaggttcgattctctctggtgtcaatttg 1600275  T

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Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 240
Target Start/End: Complemental strand, 3679322 - 3679286
Alignment:
Q  204 gttcgattctctctgatgccaatttgagagggttagt 240  Q
    ||||||||||||||| |||||||||||| ||||||||    
T  3679322 gttcgattctctctggtgccaatttgagggggttagt 3679286  T

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Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 229
Target Start/End: Original strand, 51814515 - 51814587
Alignment:
Q  158 tggtattggcttgagatttgggagtatgttcctcctcaaggattca-gttcgattctctctgatgccaatttg 229  Q
    |||||||| |||||||| || |||| || ||||||||||||  ||| ||||||||||||| | ||||||||||    
T  51814515 tggtattgacttgagatctgagagtgtgctcctcctcaaggtctcaggttcgattctctccggtgccaatttg 51814587  T

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Target: chr3 (Bit Score: 51; Significance: 2e-20; HSPs: 10)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 46518646 - 46518732
Alignment:
Q  155 tagtggtattggcttgagatttgggagtatgttcctcctcaaggattca-gttcgattctctctgatgccaatttgagagggttagt 240  Q
    |||||||||||||||| ||| ||||||| || |||||||||||| |||| ||| |||||||||||||||||||||||| ||||||||    
T  46518646 tagtggtattggcttgggatctgggagtgtgctcctcctcaaggtttcaggtttgattctctctgatgccaatttgagggggttagt 46518732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 30311324 - 30311410
Alignment:
Q  155 tagtggtattggcttgagatttgggagtatgttcctcctcaaggattcag-ttcgattctctctgatgccaatttgagagggttagt 240  Q
    ||||||||| |||||| ||| ||||||| || ||||||||||||  |||| ||||||||||| || |||||||||||| ||||||||    
T  30311324 tagtggtataggcttgggatctgggagtgtgctcctcctcaaggtctcaggttcgattctctttggtgccaatttgagggggttagt 30311410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 27093419 - 27093334
Alignment:
Q  155 tagtggtattggcttgagatttgggagtatgttcctcctcaaggattca-gttcgattctctctgatgccaatttgagagggttagt 240  Q
    ||||||||||||||||  | |||||||| || ||||||||||||  ||| ||| ||||||||||| ||||||||||| |||||||||    
T  27093419 tagtggtattggcttggaacttgggagtgtgctcctcctcaaggtctcaggtttgattctctctggtgccaatttga-agggttagt 27093334  T

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Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 53412963 - 53413049
Alignment:
Q  155 tagtggtattggcttgagatttgggagtatgttcctcctcaaggattcag-ttcgattctctctgatgccaatttgagagggttagt 240  Q
    ||||||||||||||||  |  ||||||| || ||||||||||||  |||| ||| |||||||||| |||||||||||| ||||||||    
T  53412963 tagtggtattggcttgtaacctgggagtgtgctcctcctcaaggtctcaggttcaattctctctggtgccaatttgagggggttagt 53413049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 8796131 - 8796074
Alignment:
Q  175 ttgggagtatgttcctcctcaaggattca-gttcgattctctctgatgccaatttgag 231  Q
    ||||||||||| ||||||||||||  ||| ||||||||||||||||||| ||||||||    
T  8796131 ttgggagtatgctcctcctcaaggtctcaagttcgattctctctgatgctaatttgag 8796074  T

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Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 240
Target Start/End: Original strand, 27259185 - 27259265
Alignment:
Q  161 tattggcttgagatttgggagtatgttcctcctcaaggattcag-ttcgattctctctgatgccaatttgagagggttagt 240  Q
    |||||||||| ||  ||||||| || |||||||| ||| ||||| || |||||||||||||| ||||||||| ||||||||    
T  27259185 tattggcttgggacctgggagtgtgctcctcctcgaggtttcaggtttgattctctctgatgtcaatttgagggggttagt 27259265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 15048116 - 15048033
Alignment:
Q  158 tggtattggcttgagatttgggagtatgttcctcctcaaggattcag-ttcgattctctctgatgccaatttgagagggttagt 240  Q
    |||||| |||||| ||| ||||| | || ||||||||||||  |||| ||||||| |||||| |||||||||||| ||||||||    
T  15048116 tggtataggcttgggatctgggaatgtgctcctcctcaaggtctcaggttcgattatctctggtgccaatttgagggggttagt 15048033  T

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Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 240
Target Start/End: Complemental strand, 28703461 - 28703376
Alignment:
Q  156 agtggtattggcttgagatttgggagtatgttcctcctcaaggattcag-ttcgattctctctgatgccaatttgagagggttagt 240  Q
    |||| |||| ||||| ||| ||||||| || ||||| ||||||  |||| |||||||||||||| ||||||||||||  |||||||    
T  28703461 agtgatattagcttgggatctgggagtgtgctcctcttcaaggtctcaggttcgattctctctggtgccaatttgaggaggttagt 28703376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 217
Target Start/End: Original strand, 36720401 - 36720462
Alignment:
Q  157 gtggtattggcttgagatttgggagtatgttcctcctcaaggattca-gttcgattctctct 217  Q
    |||||||||||||| ||| ||||||| || |||||||| ||| |||| ||||||||||||||    
T  36720401 gtggtattggcttgggatatgggagtgtgctcctcctcgaggtttcaggttcgattctctct 36720462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 237
Target Start/End: Original strand, 40063636 - 40063720
Alignment:
Q  154 ttagtggtattggcttgagatttgggagtatgttcctcctcaaggattc-agttcgattctctctgatgccaatttgagagggtt 237  Q
    ||||| ||||||||||| ||| || ||||||| ||||||| ||||  || ||||||||||||||   |||||||||||| |||||    
T  40063636 ttagtagtattggcttgggatctgagagtatgctcctccttaaggtctcaagttcgattctctccagtgccaatttgagggggtt 40063720  T

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Target: chr6 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 12188361 - 12188275
Alignment:
Q  155 tagtggtattggcttgagatttgggagtatgttcctcctcaaggattca-gttcgattctctctgatgccaatttgagagggttagt 240  Q
    |||||||||||||||| ||  ||||||| || |||||||||||| |||| ||||||||||||||  |||||||||||| ||||||||    
T  12188361 tagtggtattggcttgggacctgggagtgtgctcctcctcaaggtttcaagttcgattctctctagtgccaatttgagggggttagt 12188275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 240
Target Start/End: Complemental strand, 15951358 - 15951274
Alignment:
Q  157 gtggtattggcttgagatttgggagtatgttcctcctcaaggattca-gttcgattctctctgatgccaatttgagagggttagt 240  Q
    |||||||  ||||||||||||||||| || ||||||||||||  ||| |||| |||||||||| | |||||||||||||||||||    
T  15951358 gtggtataagcttgagatttgggagtgtgctcctcctcaaggtctcatgttcaattctctctggtaccaatttgagagggttagt 15951274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 175 - 240
Target Start/End: Original strand, 13330125 - 13330191
Alignment:
Q  175 ttgggagtatgttcctcctcaaggattcag-ttcgattctctctgatgccaatttgagagggttagt 240  Q
    ||||||||| | ||||||||||||  |||| |||||||||||||  |||||||||||||||||||||    
T  13330125 ttgggagtaagctcctcctcaaggtctcagattcgattctctcttgtgccaatttgagagggttagt 13330191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 225
Target Start/End: Complemental strand, 1056743 - 1056672
Alignment:
Q  155 tagtggtattggcttgagatttgggagtatgttcctcctcaagg-attcagttcgattctctctgatgccaa 225  Q
    ||||||||||||| || || ||||||||||| || |||||||||  || |||||||||||||||| ||||||    
T  1056743 tagtggtattggcctgggacttgggagtatgctcatcctcaaggttttaagttcgattctctctggtgccaa 1056672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 228
Target Start/End: Original strand, 3779357 - 3779431
Alignment:
Q  155 tagtggtattggcttgagatttgggagtatgttcctcctcaaggattcag-ttcgattctctctgatgccaattt 228  Q
    ||||||||||||||||||| |||||||| || |||| |||||||  |||| ||| |||| |||||||| ||||||    
T  3779357 tagtggtattggcttgagacttgggagtgtgctccttctcaaggtctcagattcaattccctctgatgtcaattt 3779431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 240
Target Start/End: Complemental strand, 11306211 - 11306146
Alignment:
Q  176 tgggagtatgttcctcctcaaggattcag-ttcgattctctctgatgccaatttgagagggttagt 240  Q
    |||||||||| || || ||||||  |||| |||||||||||||| |||||||||||| ||||||||    
T  11306211 tgggagtatgctcatcttcaaggtctcaggttcgattctctctggtgccaatttgagggggttagt 11306146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 228
Target Start/End: Original strand, 33549124 - 33549196
Alignment:
Q  157 gtggtattggcttgagatttgggagtatgttcctcctcaaggattcag-ttcgattctctctgatgccaattt 228  Q
    |||||||||||||| ||  ||||||| || |||||||| |||  |||| |||||||||||| |||||||||||    
T  33549124 gtggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctcggatgccaattt 33549196  T

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Target: chr4 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 37109409 - 37109323
Alignment:
Q  155 tagtggtattggcttgagatttgggagtatgttcctcctcaaggattcag-ttcgattctctctgatgccaatttgagagggttagt 240  Q
    |||||||||||||||| ||  ||||||| || ||||||||||||  |||| |||||||||||||| |||||||||||| ||||||||    
T  37109409 tagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaatttgagggggttagt 37109323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 38869786 - 38869872
Alignment:
Q  155 tagtggtattggcttgagatttgggagtatgttcctcctcaaggattca-gttcgattctctctgatgccaatttgagagggttagt 240  Q
    |||||||||||||||| ||| ||||||| || ||||||||||||  ||| ||||||||| ||||| |||||||||||| ||||||||    
T  38869786 tagtggtattggcttgggatctgggagtgtgctcctcctcaaggtctcaggttcgattccctctggtgccaatttgagggggttagt 38869872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 4249195 - 4249281
Alignment:
Q  155 tagtggtattggcttgagatttgggagtatgttcctcctcaaggattcag-ttcgattctctctgatgccaatttgagagggttagt 240  Q
    ||||||||| |||||| ||||| ||||| || ||||||||||||  |||| || ||||||||||| |||||||||||| ||||||||    
T  4249195 tagtggtataggcttgggattttggagtgtgctcctcctcaaggtctcaggtttgattctctctggtgccaatttgagggggttagt 4249281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 16581711 - 16581797
Alignment:
Q  155 tagtggtattggcttgagatttgggagtatgttcctcctcaaggattcag-ttcgattctctctgatgccaatttgagagggttagt 240  Q
    ||||||||||||||||  |  ||||||| || ||||||||||||  |||| ||| ||| |||||| |||||||||||||||||||||    
T  16581711 tagtggtattggcttggaacctgggagtctgctcctcctcaaggtctcaggttctattatctctggtgccaatttgagagggttagt 16581797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 23377972 - 23378060
Alignment:
Q  153 tttagtggtattggcttgagatttgggagtatgttcctcctcaaggattca-gttcgattctctctgatgccaatttgagagggttagt 240  Q
    ||||||| |||||||||| ||  ||||||| || ||||||||||||  ||| ||||||||||||||  |||||||||||| ||| ||||    
T  23377972 tttagtgttattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctctctagtgccaatttgagggggctagt 23378060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 230
Target Start/End: Complemental strand, 31759716 - 31759640
Alignment:
Q  155 tagtggtattggcttgagatttgggagtatgttcctcctcaaggattcag-ttcgattctctctgatgccaatttga 230  Q
    |||||||||||||||| || |||||||| || ||||||||||||  |||| ||||||||| |||| | |||||||||    
T  31759716 tagtggtattggcttgggacttgggagtgtgctcctcctcaaggtctcagattcgattctttctggtaccaatttga 31759640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 7292856 - 7292770
Alignment:
Q  155 tagtggtattggcttgagatttgggagtatgttcctcctcaaggattcag-ttcgattctctctgatgccaatttgagagggttagt 240  Q
    ||||||||||||||||  |  ||||||| || |||||||||| |  |||| |||||||||||||  |||||||||||| ||||||||    
T  7292856 tagtggtattggcttggaacctgggagtgtgctcctcctcaaagtctcaggttcgattctctctagtgccaatttgagggggttagt 7292770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 229
Target Start/End: Original strand, 51969048 - 51969110
Alignment:
Q  168 ttgagatttgggagtatgttcctcctcaaggattca-gttcgattctctctgatgccaatttg 229  Q
    ||||||||||||||| || |||||||||||| |||| ||||  ||||||||| ||||||||||    
T  51969048 ttgagatttgggagtgtgctcctcctcaaggtttcaggttcatttctctctggtgccaatttg 51969110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 240
Target Start/End: Complemental strand, 2185040 - 2185004
Alignment:
Q  204 gttcgattctctctgatgccaatttgagagggttagt 240  Q
    ||||||||||||| |||||||||||||| ||||||||    
T  2185040 gttcgattctctccgatgccaatttgagggggttagt 2185004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 240
Target Start/End: Original strand, 15180806 - 15180842
Alignment:
Q  204 gttcgattctctctgatgccaatttgagagggttagt 240  Q
    ||||||||||||||| |||||||||||| ||||||||    
T  15180806 gttcgattctctctggtgccaatttgagggggttagt 15180842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 6)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 13803513 - 13803599
Alignment:
Q  155 tagtggtattggcttgagatttgggagtatgttcctcctcaaggattcag-ttcgattctctctgatgccaatttgagagggttagt 240  Q
    ||||| ||||||||||||| || ||||| || ||||||||||||  |||| ||||||| ||||||||||||||||||| ||||||||    
T  13803513 tagtgatattggcttgagacttaggagtgtgctcctcctcaaggtctcaggttcgattatctctgatgccaatttgagggggttagt 13803599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 30410607 - 30410521
Alignment:
Q  155 tagtggtattggcttgagatttgggagtatgttcctcctcaaggattca-gttcgattctctctgatgccaatttgagagggttagt 240  Q
    |||||||||||||||| ||  | ||||| || ||||||||||||| ||| |||||||| |||||| |||||||||||| ||||||||    
T  30410607 tagtggtattggcttgggacctaggagtgtgctcctcctcaaggactcatgttcgattttctctggtgccaatttgagggggttagt 30410521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 155 - 229
Target Start/End: Original strand, 1435082 - 1435156
Alignment:
Q  155 tagtggtattggcttgagatttgggagtatgttcctcctcaaggattcagttcgattctctctgatgccaatttg 229  Q
    |||||||| ||||||| ||||| ||||| || | ||||||||||  |||||||||||||||||| || |||||||    
T  1435082 tagtggtactggcttgggatttaggagtgtgcttctcctcaaggtctcagttcgattctctctggtgtcaatttg 1435156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 14500295 - 14500381
Alignment:
Q  155 tagtggtattggcttgagatttgggagtatgttcctcctcaaggattcag-ttcgattctctctgatgccaatttgagagggttagt 240  Q
    |||||||||  ||||||||| ||||||| || |||||||| |||  |||| |||||||||||||| |||||||||||| ||| ||||    
T  14500295 tagtggtataagcttgagatctgggagtgtgctcctcctctaggtctcagattcgattctctctggtgccaatttgagggggatagt 14500381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 238
Target Start/End: Complemental strand, 21304032 - 21303968
Alignment:
Q  175 ttgggagtatgttcctcctcaaggattcag-ttcgattctctctgatgccaatttgagagggtta 238  Q
    ||||||||||| ||||||| |||| ||||| |||||||||||||| || ||||||||| ||||||    
T  21304032 ttgggagtatgctcctcctgaaggtttcaggttcgattctctctggtgtcaatttgagggggtta 21303968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 40416448 - 40416362
Alignment:
Q  155 tagtggtattggcttgagatttgggagtatgttcctcctcaaggattcag-ttcgattctctctgatgccaatttgagagggttagt 240  Q
    ||||||||||| ||||  |  |||||||||| ||||||| ||||  |||| |||||||||||||| |||||||||||  ||||||||    
T  40416448 tagtggtattgacttggaacctgggagtatgctcctccttaaggtctcaggttcgattctctctggtgccaatttgaaggggttagt 40416362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 154 - 240
Target Start/End: Complemental strand, 37258425 - 37258338
Alignment:
Q  154 ttagtggtattggcttgagatttgggagtatgttcctcctcaaggattcag-ttcgattctctctgatgccaatttgagagggttagt 240  Q
    ||||||||||| ||||| ||| | ||||| || |||||||||||| ||||| |||||||||||||| || ||||||||| ||||||||    
T  37258425 ttagtggtattagcttgggatctaggagtgtgctcctcctcaaggtttcaggttcgattctctctggtgtcaatttgagggggttagt 37258338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 229
Target Start/End: Original strand, 43442214 - 43442289
Alignment:
Q  155 tagtggtattggcttgagatttgggagtatgttcctcctcaaggattca-gttcgattctctctgatgccaatttg 229  Q
    |||||||||||| ||||||| ||||||| || ||||||||||||  ||| ||||||||||||||| || |||||||    
T  43442214 tagtggtattggtttgagatctgggagtgtgctcctcctcaaggtctcaggttcgattctctctgttgtcaatttg 43442289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 25627075 - 25627160
Alignment:
Q  155 tagtggtattggcttgagatttgggagtatgttcctcctcaaggattca-gttcgattctctctgatgccaatttgagagggttagt 240  Q
    ||||||||||||||||  | |||||||| || ||||||||||||  ||| ||||||||||||||| || ||||||||| ||||||||    
T  25627075 tagtggtattggcttggaacttgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgtcaatttgag-gggttagt 25627160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 240
Target Start/End: Original strand, 14285200 - 14285265
Alignment:
Q  176 tgggagtatgttcctcctcaaggattcag-ttcgattctctctgatgccaatttgagagggttagt 240  Q
    ||||||| || ||||||||||||  |||| |||||||||||||| |||||||||||| ||||||||    
T  14285200 tgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaatttgagggggttagt 14285265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 238
Target Start/End: Complemental strand, 26078109 - 26078025
Alignment:
Q  155 tagtggtattggcttgagatttgggagtatgttcctcctcaaggattcag-ttcgattctctctgatgccaatttgagagggtta 238  Q
    |||||||||||| ||| || ||||||||||| | ||| ||||||  |||| |||||||||||||  |||||||||||| ||||||    
T  26078109 tagtggtattggtttgggacttgggagtatgcttctcttcaaggtctcaggttcgattctctctagtgccaatttgagggggtta 26078025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 240
Target Start/End: Original strand, 31074260 - 31074336
Alignment:
Q  165 ggcttgagatttgggagtatgttcctcctcaaggattcag-ttcgattctctctgatgccaatttgagagggttagt 240  Q
    |||||| ||||| ||||| ||||||||||||||   |||| |||||||||||||| ||||||||| ||||| |||||    
T  31074260 ggcttgggattttggagtgtgttcctcctcaagatctcaggttcgattctctctggtgccaatttaagaggattagt 31074336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 237
Target Start/End: Original strand, 34984824 - 34984907
Alignment:
Q  155 tagtggtattggcttgagatttgggagtatgttcctcctcaaggattcag-ttcgattctctctgatgccaatttgagagggtt 237  Q
    ||||||||||||||||  |  ||||||| || ||||||||||||  | || |||||||||||||| |||||||||||| |||||    
T  34984824 tagtggtattggcttggaacctgggagtgtgctcctcctcaaggtcttaggttcgattctctctggtgccaatttgagggggtt 34984907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 18596059 - 18595973
Alignment:
Q  155 tagtggtattggcttgagatttgggagtatgttcctcctcaaggattcag-ttcgattctctctgatgccaatttgagagggttagt 240  Q
    |||||||||||||||| ||  ||||| | || ||||||||||||  | || ||||||| |||||| |||||||||||| ||||||||    
T  18596059 tagtggtattggcttgtgacctgggaatgtgctcctcctcaaggtcttaggttcgattttctctggtgccaatttgagggggttagt 18595973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 228
Target Start/End: Original strand, 29075799 - 29075873
Alignment:
Q  155 tagtggtattggcttgagatttgggagtatgttcctcctcaaggattca-gttcgattctctctgatgccaattt 228  Q
    |||||||||||||||| ||| ||||||| || |||||||| ||   ||| ||||||||||||||| |||||||||    
T  29075799 tagtggtattggcttgggatctgggagtgtgctcctcctcgagatctcatgttcgattctctctggtgccaattt 29075873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 228
Target Start/End: Original strand, 16773827 - 16773899
Alignment:
Q  157 gtggtattggcttgagatttgggagtatgttcctcctcaaggattcag-ttcgattctctctgatgccaattt 228  Q
    ||||||||| |||| ||  ||||||| || |||||||| |||  |||| ||||||||||||||||||||||||    
T  16773827 gtggtattgacttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctctgatgccaattt 16773899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 193
Target Start/End: Original strand, 24652888 - 24652924
Alignment:
Q  157 gtggtattggcttgagatttgggagtatgttcctcct 193  Q
    ||||||||| |||||||||||||||| ||||||||||    
T  24652888 gtggtattgacttgagatttgggagtgtgttcctcct 24652924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 156 - 237
Target Start/End: Complemental strand, 35446 - 35364
Alignment:
Q  156 agtggtattggcttgagatttgggagtatgttcctcctcaagga-ttcagttcgattctctctgatgccaatttgagagggtt 237  Q
    |||||||||||||||  || | |||||||| ||||||||||||  || ||||||||| ||||||||||||||||||| |||||    
T  35446 agtggtattggcttggaatctaggagtatgctcctcctcaaggtcttaagttcgattatctctgatgccaatttgagggggtt 35364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 13)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 153 - 230
Target Start/End: Complemental strand, 25655288 - 25655210
Alignment:
Q  153 tttagtggtattggcttgagatttgggagtatgttcctcctcaaggattca-gttcgattctctctgatgccaatttga 230  Q
    ||||||||||||| |||| ||| || |||| || |||||||||||| |||| ||||||||||||||| |||||||||||    
T  25655288 tttagtggtattgacttgggatctgtgagtgtgatcctcctcaaggtttcaggttcgattctctctggtgccaatttga 25655210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 26459468 - 26459382
Alignment:
Q  155 tagtggtattggcttgagatttgggagtatgttcctcctcaaggattcag-ttcgattctctctgatgccaatttgagagggttagt 240  Q
    |||||||||||||||| ||  ||||||| || ||||||||||||  |||| |||||||||||||| |||||||||||  ||||||||    
T  26459468 tagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaatttgaaggggttagt 26459382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 39631862 - 39631948
Alignment:
Q  155 tagtggtattggcttgagatttgggagtatgttcctcctcaaggattcag-ttcgattctctctgatgccaatttgagagggttagt 240  Q
    |||||||||||||||| ||  |||||||| | ||||||||||||  |||| |||||||||||||  |||||||||||| ||||||||    
T  39631862 tagtggtattggcttgggacctgggagtaagctcctcctcaaggtctcaggttcgattctctcttgtgccaatttgagggggttagt 39631948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 43215202 - 43215288
Alignment:
Q  155 tagtggtattggcttgagatttgggagtatgttcctcctcaaggattcag-ttcgattctctctgatgccaatttgagagggttagt 240  Q
    |||||||||||||||| ||  | ||||| || ||||||||||||  |||| ||||||||||||| ||||||||||||| ||||||||    
T  43215202 tagtggtattggcttgggacctcggagtgtgctcctcctcaaggtctcaggttcgattctctcttatgccaatttgagggggttagt 43215288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 18363714 - 18363799
Alignment:
Q  155 tagtggtattggcttgagatttgggagtatgttcctcctcaaggattca-gttcgattctctctgatgccaatttgagagggttagt 240  Q
    ||||||||| |||||||||||||||||| || ||||||||||||  ||| ||| ||||||||||  | |||||||||| ||||||||    
T  18363714 tagtggtataggcttgagatttgggagtgtgctcctcctcaaggtctcaggtttgattctctctagtaccaatttgag-gggttagt 18363799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 175 - 228
Target Start/End: Complemental strand, 27313772 - 27313718
Alignment:
Q  175 ttgggagtatgttcctcctcaaggattcag-ttcgattctctctgatgccaattt 228  Q
    |||||||| || |||||||||||| ||||| ||||||||||||||||||||||||    
T  27313772 ttgggagtttgctcctcctcaaggtttcagattcgattctctctgatgccaattt 27313718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 35119401 - 35119487
Alignment:
Q  155 tagtggtattggcttgagatttgggagtatgttcctcctcaaggattcag-ttcgattctctctgatgccaatttgagagggttagt 240  Q
    ||||||||||| |||| ||| |||| ||||| || ||||||||  ||||| ||||||||||| | |||||||||||||||| |||||    
T  35119401 tagtggtattgacttgggatctgggtgtatgctcatcctcaagatttcaggttcgattctctttaatgccaatttgagaggattagt 35119487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 231
Target Start/End: Original strand, 11700183 - 11700259
Alignment:
Q  155 tagtggtattggcttgagatttgggagtatgttcctcctcaaggattca-gttcgattctctctgatgccaatttgag 231  Q
    |||||| |||||||||||| ||| |||| || ||||||||||||  ||| ||||||||||||||| ||||||||||||    
T  11700183 tagtggcattggcttgagacttgagagtttgctcctcctcaaggtctcaggttcgattctctctg-tgccaatttgag 11700259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 240
Target Start/End: Complemental strand, 29785357 - 29785273
Alignment:
Q  157 gtggtattggcttgagatttgggagtatgttcctcctcaaggattca-gttcgattctctctgatgccaatttgagagggttagt 240  Q
    ||||||| |||||| ||| ||| ||| || ||||||||||||  ||| |||||||||| |||| |||||||||||| ||||||||    
T  29785357 gtggtataggcttgggatctggaagtgtgctcctcctcaaggtctcatgttcgattctttctggtgccaatttgagggggttagt 29785273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 33222388 - 33222474
Alignment:
Q  155 tagtggtattggcttgagatttgggagtatgttcctcctcaaggattcag-ttcgattctctctgatgccaatttgagagggttagt 240  Q
    |||||||||||||||| ||  ||| ||| |  || |||||||||  |||| |||||||||||||| || ||||||||||||||||||    
T  33222388 tagtggtattggcttgggacctggaagtgtactcatcctcaaggtctcaggttcgattctctctggtgtcaatttgagagggttagt 33222474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 240
Target Start/End: Complemental strand, 37162396 - 37162322
Alignment:
Q  167 cttgagatttgggagtatgttcctcctcaaggattca-gttcgattctctctgatgccaatttgagagggttagt 240  Q
    |||||||||||||||| || | || |||||||  ||| ||||||||||||||| |||||||||||| || |||||    
T  37162396 cttgagatttgggagtgtgcttcttctcaaggtctcaagttcgattctctctggtgccaatttgaggggattagt 37162322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 203 - 240
Target Start/End: Original strand, 17113862 - 17113899
Alignment:
Q  203 agttcgattctctctgatgccaatttgagagggttagt 240  Q
    |||||||||||||||||||| |||||||| ||||||||    
T  17113862 agttcgattctctctgatgctaatttgagggggttagt 17113899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 228
Target Start/End: Complemental strand, 11735530 - 11735462
Alignment:
Q  161 tattggcttgagatttgggagtatgttcctcctcaaggattca-gttcgattctctctgatgccaattt 228  Q
    |||||||||||||||||||||| || || |||| |||| || | ||||||||||||| |||| ||||||    
T  11735530 tattggcttgagatttgggagtgtggtcttccttaaggttttatgttcgattctctccgatgacaattt 11735462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 157 - 229
Target Start/End: Complemental strand, 13102 - 13029
Alignment:
Q  157 gtggtattggcttgagatttgggagtatgttcctcctcaaggattca-gttcgattctctctgatgccaatttg 229  Q
    |||||||||||||||||| ||||||| || ||||||||||||  ||| ||||||||||||| |||| |||||||    
T  13102 gtggtattggcttgagatctgggagtgtgctcctcctcaaggtctcaggttcgattctctccgatgtcaatttg 13029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.000000000005; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 155 - 238
Target Start/End: Original strand, 18540316 - 18540400
Alignment:
Q  155 tagtggtattggcttgagatttgggagtatgttcctcctcaaggattcag-ttcgattctctctgatgccaatttgagagggtta 238  Q
    |||||||||||||||| ||  ||||||| |  | ||||||||||  |||| |||||||||||||| |||||||||||||||||||    
T  18540316 tagtggtattggcttgggacctgggagtgtacttctcctcaaggtctcaggttcgattctctctggtgccaatttgagagggtta 18540400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 229
Target Start/End: Original strand, 35287736 - 35287809
Alignment:
Q  157 gtggtattggcttgagatttgggagtatgttcctcctcaaggattca-gttcgattctctctgatgccaatttg 229  Q
    ||||| |||||||||||||| ||||| || ||||||||||||  ||| ||||||||||||| | ||||||||||    
T  35287736 gtggtgttggcttgagattttggagtgtgctcctcctcaaggtatcatgttcgattctctccggtgccaatttg 35287809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 6569829 - 6569743
Alignment:
Q  155 tagtggtattggcttgagatttgggagtatgttcctcctcaaggattca-gttcgattctctctgatgccaatttgagagggttagt 240  Q
    ||||| |||||||||| ||| ||||||| || |||||||  ||| |||| |||||||||||| || || ||||||||| ||||||||    
T  6569829 tagtgatattggcttgggatctgggagtgtgctcctcctttaggtttcatgttcgattctctttggtgtcaatttgagggggttagt 6569743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 12988446 - 12988531
Alignment:
Q  155 tagtggtattggcttgagatttgggagtatgttcctcctcaaggattcag-ttcgattctctctgatgccaatttgagagggttagt 240  Q
    ||||||||||||||||  |  ||| ||| || |||||||||||| ||||| |||||| ||||||| |||||||||||| ||||||||    
T  12988446 tagtggtattggcttggaacctggaagtgtgctcctcctcaaggtttcaggttcgatcctctctggtgccaatttgag-gggttagt 12988531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 229
Target Start/End: Original strand, 13129687 - 13129761
Alignment:
Q  156 agtggtattggcttgagatttgggagtatgttcctcctcaaggattcag-ttcgattctctctgatgccaatttg 229  Q
    ||||| ||||| ||| || ||||||||  | |||||||||||| ||||| |||||||||||||| ||||||||||    
T  13129687 agtggcattggtttgggacttgggagtgcgctcctcctcaaggtttcaggttcgattctctctggtgccaatttg 13129761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 228
Target Start/End: Complemental strand, 35690122 - 35690048
Alignment:
Q  155 tagtggtattggcttgagatttgggagtatgttcctcctcaaggattca-gttcgattctctctgatgccaattt 228  Q
    |||||||||||||||| ||| |||| || || ||||||||||||  ||| ||||||||||||||| || ||||||    
T  35690122 tagtggtattggcttgggatctgggtgtttgctcctcctcaaggtctcaggttcgattctctctggtgtcaattt 35690048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 227
Target Start/End: Complemental strand, 11942933 - 11942864
Alignment:
Q  158 tggtattggcttgagatttgggagtatgttcctcctcaaggattcagttcgattctctctgatgccaatt 227  Q
    ||||||||||||||||| ||| | | || || |||| ||||  ||||||| |||||||||||||||||||    
T  11942933 tggtattggcttgagatctggaaatgtgctcttccttaaggtctcagttcaattctctctgatgccaatt 11942864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 228
Target Start/End: Original strand, 968382 - 968454
Alignment:
Q  157 gtggtattggcttgagatttgggagtatgttcctcctcaaggattcag-ttcgattctctctgatgccaattt 228  Q
    |||||||||||||| ||  ||||||| || |||||||| |||  |||| |||||||||||| |||||||||||    
T  968382 gtggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctccgatgccaattt 968454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 229
Target Start/End: Complemental strand, 41691 - 41616
Alignment:
Q  155 tagtggtattggcttgagatttgggagtatgttcctcctcaaggattca-gttcgattctctctgatgccaatttg 229  Q
    |||||||||||||||||||| || ||||||| |||||||| |||  ||| |||| ||||||||||||| |||||||    
T  41691 tagtggtattggcttgagatctgagagtatgctcctcctcgaggtctcaggttcaattctctctgatgtcaatttg 41616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 230
Target Start/End: Complemental strand, 25405 - 25329
Alignment:
Q  155 tagtggtattggcttgagatttgggagtatgttcctcctcaaggattca-gttcgattctctctgatgccaatttga 230  Q
    ||||||||||||||||||| |||||||| || |||| |||||||  ||| |||||||| |||||| || ||||||||    
T  25405 tagtggtattggcttgagacttgggagtgtgctccttctcaaggtctcaggttcgattatctctggtgtcaatttga 25329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 231
Target Start/End: Original strand, 18315 - 18394
Alignment:
Q  153 tttagtggtattggcttgagatttgggagtatgttcctcctcaaggattca-gttcgattctctctgatgccaatttgag 231  Q
    |||||||| |||||||||  || ||||| | || |||||||||||| |||| ||| ||||||||||| ||||||||||||    
T  18315 tttagtggcattggcttggaatctgggattgtgctcctcctcaaggtttcaggtttgattctctctggtgccaatttgag 18394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 20020 - 19935
Alignment:
Q  155 tagtggtattggcttgagatttgggagtatgttcctcctcaaggattca-gttcgattctctctgatgccaatttgagagggttagt 240  Q
    ||||||||||||||||  |  |||||||||| ||||||||||||  ||| ||||||||||||||| ||  |||||||| ||||||||    
T  20020 tagtggtattggcttggaacctgggagtatgctcctcctcaaggtctcaggttcgattctctctggtgttaatttgag-gggttagt 19935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 230
Target Start/End: Complemental strand, 2758 - 2693
Alignment:
Q  166 gcttgagatttgggagtatgttcctcctcaaggattcag-ttcgattctctctgatgccaatttga 230  Q
    |||||||| || ||||| || ||||||||||||  |||| |||||||||||||| |||||||||||    
T  2758 gcttgagaattaggagtctgctcctcctcaaggtctcaggttcgattctctctggtgccaatttga 2693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 198
Target Start/End: Complemental strand, 15833 - 15792
Alignment:
Q  157 gtggtattggcttgagatttgggagtatgttcctcctcaagg 198  Q
    |||||||||||||| ||||| |||||||| ||||||||||||    
T  15833 gtggtattggcttgggattttggagtatgctcctcctcaagg 15792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 228
Target Start/End: Complemental strand, 15379 - 15307
Alignment:
Q  157 gtggtattggcttgagatttgggagtatgttcctcctcaaggattcag-ttcgattctctctgatgccaattt 228  Q
    |||||||||||||| ||  ||||||| || |||||||| |||  |||| |||||||||||| |||||||||||    
T  15379 gtggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctcggatgccaattt 15307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 212
Target Start/End: Original strand, 47402 - 47458
Alignment:
Q  157 gtggtattggcttgagatttgggagtatgttcctcctcaaggattc-agttcgattc 212  Q
    |||||||||||||  ||| |||||||||||||||||||| || ||| ||||||||||    
T  47402 gtggtattggcttaggatctgggagtatgttcctcctcatggtttcaagttcgattc 47458  T

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