View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5218-Insertion-7 (Length: 731)

Name: NF5218-Insertion-7
Description: NF5218
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5218-Insertion-7
NF5218-Insertion-7
[»] chr5 (46 HSPs)
chr5 (9-299)||(17088118-17088402)
chr5 (363-564)||(17088470-17088670)
chr5 (206-307)||(39698565-39698671)
chr5 (206-308)||(31084347-31084448)
chr5 (168-307)||(37328775-37328916)
chr5 (608-657)||(17088667-17088716)
chr5 (168-305)||(19579688-19579829)
chr5 (208-306)||(21542056-21542159)
chr5 (206-307)||(7677729-7677835)
chr5 (253-307)||(21576685-21576739)
chr5 (206-307)||(35017061-35017162)
chr5 (207-307)||(14873542-14873641)
chr5 (248-309)||(19820326-19820389)
chr5 (208-307)||(21522776-21522880)
chr5 (208-307)||(21533342-21533446)
chr5 (253-304)||(39268541-39268592)
chr5 (206-309)||(19552474-19552578)
chr5 (254-305)||(21190998-21191049)
chr5 (237-314)||(32766865-32766947)
chr5 (206-306)||(3966527-3966632)
chr5 (259-307)||(17123119-17123166)
chr5 (253-305)||(23015926-23015978)
chr5 (208-303)||(36642696-36642795)
chr5 (241-307)||(43564929-43565000)
chr5 (258-308)||(4105329-4105379)
chr5 (253-303)||(30183625-30183675)
chr5 (254-308)||(42893426-42893480)
chr5 (253-314)||(16304359-16304420)
chr5 (271-308)||(22423763-22423800)
chr5 (208-305)||(43001826-43001922)
chr5 (271-307)||(10298633-10298669)
chr5 (255-307)||(17593663-17593715)
chr5 (168-257)||(21351889-21351977)
chr5 (253-305)||(24238603-24238655)
chr5 (259-307)||(38464313-38464361)
chr5 (209-307)||(11685966-11686068)
chr5 (258-305)||(21351852-21351899)
chr5 (257-307)||(2419936-2419986)
chr5 (257-307)||(2436980-2437030)
chr5 (217-306)||(6401533-6401627)
chr5 (253-295)||(15382550-15382592)
chr5 (253-307)||(21194063-21194117)
chr5 (253-307)||(30098402-30098456)
chr5 (241-305)||(30502330-30502399)
chr5 (241-305)||(30542673-30542742)
chr5 (258-307)||(39695951-39695999)
[»] chr6 (51 HSPs)
chr6 (418-624)||(26633554-26633761)
chr6 (418-624)||(26739530-26739737)
chr6 (206-307)||(10339054-10339161)
chr6 (206-307)||(8365448-8365554)
chr6 (206-307)||(16766721-16766827)
chr6 (206-308)||(9107298-9107405)
chr6 (206-307)||(17327590-17327690)
chr6 (463-629)||(27701553-27701720)
chr6 (142-306)||(17841530-17841686)
chr6 (206-306)||(31384944-31385048)
chr6 (206-307)||(10770607-10770709)
chr6 (208-305)||(12696350-12696446)
chr6 (206-308)||(8714004-8714111)
chr6 (206-284)||(9522915-9522998)
chr6 (253-308)||(34595199-34595254)
chr6 (253-307)||(8776908-8776962)
chr6 (253-307)||(28152163-28152217)
chr6 (208-257)||(21395292-21395341)
chr6 (253-306)||(31959215-31959268)
chr6 (259-307)||(13360313-13360361)
chr6 (208-307)||(17435225-17435329)
chr6 (241-307)||(4877991-4878061)
chr6 (206-308)||(5970036-5970143)
chr6 (261-312)||(7378052-7378103)
chr6 (257-304)||(9025448-9025495)
chr6 (217-307)||(18367871-18367966)
chr6 (241-284)||(34172241-34172284)
chr6 (238-307)||(7248414-7248488)
chr6 (258-304)||(8389411-8389457)
chr6 (258-307)||(7938170-7938219)
chr6 (258-307)||(9629464-9629513)
chr6 (264-305)||(26178620-26178661)
chr6 (274-307)||(32511606-32511639)
chr6 (271-307)||(426478-426514)
chr6 (271-307)||(2117139-2117175)
chr6 (179-308)||(3209379-3209519)
chr6 (241-304)||(32978842-32978910)
chr6 (264-312)||(34446647-34446695)
chr6 (259-307)||(34894968-34895016)
chr6 (208-255)||(16111743-16111790)
chr6 (273-307)||(7723199-7723233)
chr6 (243-304)||(7996325-7996387)
chr6 (243-304)||(8022414-8022476)
chr6 (269-307)||(8805524-8805562)
chr6 (241-295)||(16388175-16388228)
chr6 (253-295)||(21044826-21044868)
chr6 (253-295)||(21068084-21068126)
chr6 (253-307)||(28715360-28715414)
chr6 (206-256)||(33340370-33340420)
chr6 (206-256)||(35125678-35125728)
chr6 (219-307)||(10294144-10294237)
[»] chr4 (49 HSPs)
chr4 (206-304)||(28084546-28084640)
chr4 (209-306)||(3947702-3947798)
chr4 (241-308)||(42640577-42640644)
chr4 (206-307)||(19482692-19482798)
chr4 (253-307)||(23292926-23292980)
chr4 (253-314)||(715538-715599)
chr4 (253-314)||(752864-752925)
chr4 (206-306)||(30982808-30982913)
chr4 (253-308)||(29205533-29205588)
chr4 (206-306)||(4383391-4383484)
chr4 (253-306)||(14465006-14465059)
chr4 (256-305)||(22440559-22440608)
chr4 (257-308)||(24343582-24343633)
chr4 (253-307)||(3064868-3064922)
chr4 (242-307)||(8423658-8423728)
chr4 (206-303)||(27706110-27706212)
chr4 (261-307)||(28964188-28964234)
chr4 (258-307)||(18513175-18513224)
chr4 (210-302)||(30838238-30838335)
chr4 (246-302)||(3712458-3712514)
chr4 (259-307)||(11596297-11596345)
chr4 (259-307)||(16184902-16184950)
chr4 (238-307)||(53381530-53381605)
chr4 (259-306)||(5922532-5922579)
chr4 (241-307)||(16073442-16073513)
chr4 (253-308)||(34306743-34306798)
chr4 (253-308)||(36635395-36635450)
chr4 (254-308)||(18966575-18966629)
chr4 (206-307)||(24613630-24613736)
chr4 (208-258)||(51701284-51701334)
chr4 (270-307)||(5775304-5775341)
chr4 (241-312)||(12895209-12895285)
chr4 (206-305)||(19312359-19312463)
chr4 (270-310)||(28470447-28470487)
chr4 (260-308)||(37203324-37203372)
chr4 (242-305)||(482185-482248)
chr4 (264-307)||(40784029-40784072)
chr4 (253-308)||(49431091-49431146)
chr4 (253-307)||(5414101-5414155)
chr4 (253-307)||(12884347-12884401)
chr4 (206-307)||(22234819-22234925)
chr4 (257-307)||(23386228-23386277)
chr4 (253-307)||(35161101-35161155)
chr4 (210-268)||(40742619-40742677)
chr4 (218-308)||(50280919-50281008)
chr4 (258-307)||(30094083-30094132)
chr4 (270-307)||(30299011-30299048)
chr4 (270-307)||(30327879-30327916)
chr4 (221-258)||(53490747-53490784)
[»] chr7 (46 HSPs)
chr7 (206-308)||(24339666-24339773)
chr7 (206-307)||(5409771-5409871)
chr7 (206-307)||(2334274-2334379)
chr7 (206-307)||(9778524-9778624)
chr7 (206-307)||(32093954-32094055)
chr7 (206-307)||(43027404-43027504)
chr7 (253-307)||(598273-598327)
chr7 (208-302)||(13770717-13770810)
chr7 (241-303)||(40287306-40287368)
chr7 (206-305)||(26033392-26033496)
chr7 (241-305)||(29998974-29999038)
chr7 (257-307)||(7133212-7133262)
chr7 (206-307)||(7438730-7438836)
chr7 (253-307)||(29763129-29763183)
chr7 (258-307)||(6490786-6490835)
chr7 (253-306)||(32287404-32287457)
chr7 (206-258)||(9408317-9408369)
chr7 (210-258)||(11272569-11272617)
chr7 (255-307)||(14729770-14729822)
chr7 (241-308)||(21880200-21880272)
chr7 (257-300)||(18215144-18215187)
chr7 (253-307)||(1433524-1433578)
chr7 (253-307)||(15680874-15680928)
chr7 (253-307)||(17852065-17852119)
chr7 (253-307)||(21864873-21864927)
chr7 (257-307)||(40131939-40131989)
chr7 (206-306)||(32308144-32308249)
chr7 (267-307)||(3991392-3991432)
chr7 (206-250)||(18039023-18039067)
chr7 (254-306)||(20549857-20549909)
chr7 (212-307)||(25822685-25822785)
chr7 (271-307)||(35862034-35862070)
chr7 (256-307)||(11738151-11738202)
chr7 (206-303)||(27229244-27229346)
chr7 (241-307)||(29812598-29812658)
chr7 (257-307)||(30813866-30813916)
chr7 (257-307)||(41229237-41229287)
chr7 (263-308)||(5307331-5307376)
chr7 (208-284)||(6028651-6028732)
chr7 (263-304)||(8842282-8842323)
chr7 (206-306)||(11665370-11665475)
chr7 (206-251)||(21560527-21560572)
chr7 (258-307)||(24105748-24105797)
chr7 (270-307)||(28973881-28973918)
chr7 (258-307)||(35749957-35750006)
chr7 (257-302)||(43250073-43250118)
[»] chr2 (39 HSPs)
chr2 (206-307)||(37419767-37419873)
chr2 (208-310)||(11223790-11223896)
chr2 (218-308)||(26769547-26769642)
chr2 (206-307)||(30717459-30717565)
chr2 (206-308)||(32749753-32749860)
chr2 (210-307)||(35056896-35056998)
chr2 (240-308)||(28412409-28412477)
chr2 (206-308)||(34784910-34785017)
chr2 (241-305)||(2438661-2438730)
chr2 (253-306)||(28596534-28596587)
chr2 (142-309)||(37558939-37559098)
chr2 (254-307)||(38117099-38117152)
chr2 (254-307)||(42511322-42511375)
chr2 (206-305)||(15657888-15657992)
chr2 (241-300)||(21624315-21624374)
chr2 (206-302)||(23058389-23058477)
chr2 (253-307)||(18840953-18841007)
chr2 (253-308)||(24009360-24009415)
chr2 (264-306)||(3444827-3444869)
chr2 (253-307)||(21782744-21782798)
chr2 (258-308)||(24975254-24975304)
chr2 (253-307)||(27084334-27084388)
chr2 (206-308)||(29367282-29367379)
chr2 (253-307)||(34993922-34993976)
chr2 (253-307)||(41843511-41843565)
chr2 (206-307)||(44635522-44635612)
chr2 (209-306)||(44860347-44860449)
chr2 (258-307)||(18631351-18631400)
chr2 (210-258)||(4882679-4882727)
chr2 (207-310)||(17776612-17776720)
chr2 (242-305)||(19942314-19942382)
chr2 (258-308)||(10535684-10535734)
chr2 (256-294)||(12224291-12224329)
chr2 (261-307)||(15907851-15907897)
chr2 (253-307)||(15972938-15972992)
chr2 (257-303)||(37411188-37411234)
chr2 (258-307)||(15909570-15909619)
chr2 (206-306)||(27286222-27286327)
chr2 (270-307)||(34221463-34221500)
[»] chr1 (59 HSPs)
chr1 (206-307)||(47989521-47989627)
chr1 (217-305)||(17778581-17778670)
chr1 (206-305)||(1486646-1486744)
chr1 (206-307)||(6427488-6427594)
chr1 (206-307)||(15449170-15449267)
chr1 (212-307)||(40917779-40917879)
chr1 (147-307)||(18556385-18556548)
chr1 (206-307)||(25361910-25362012)
chr1 (206-307)||(31694639-31694745)
chr1 (206-307)||(32461393-32461498)
chr1 (253-307)||(37598896-37598950)
chr1 (208-308)||(34712322-34712416)
chr1 (206-308)||(5944307-5944414)
chr1 (257-307)||(2218297-2218347)
chr1 (253-307)||(9828120-9828174)
chr1 (257-303)||(48040418-48040464)
chr1 (254-307)||(18337395-18337448)
chr1 (208-295)||(6612112-6612204)
chr1 (258-305)||(42359391-42359438)
chr1 (208-304)||(21038109-21038202)
chr1 (143-307)||(46348323-46348479)
chr1 (258-307)||(15765828-15765877)
chr1 (206-307)||(22515827-22515922)
chr1 (270-310)||(35919223-35919263)
chr1 (258-305)||(16297223-16297270)
chr1 (256-307)||(34741915-34741965)
chr1 (176-308)||(1704934-1705056)
chr1 (253-307)||(1815322-1815376)
chr1 (253-307)||(5898206-5898260)
chr1 (206-307)||(16164244-16164350)
chr1 (261-307)||(16812629-16812675)
chr1 (261-307)||(21365992-21366038)
chr1 (269-307)||(35702542-35702580)
chr1 (257-307)||(46940748-46940798)
chr1 (241-308)||(52903297-52903366)
chr1 (262-307)||(6574051-6574096)
chr1 (254-307)||(19562556-19562608)
chr1 (258-307)||(29144320-29144369)
chr1 (253-306)||(40258874-40258927)
chr1 (258-306)||(10233326-10233374)
chr1 (263-307)||(22881567-22881611)
chr1 (271-307)||(22947813-22947849)
chr1 (260-308)||(23531733-23531781)
chr1 (254-302)||(26830653-26830701)
chr1 (208-307)||(30173691-30173795)
chr1 (263-307)||(36878541-36878585)
chr1 (206-258)||(44482254-44482306)
chr1 (253-308)||(17831461-17831516)
chr1 (217-307)||(25934651-25934746)
chr1 (264-307)||(27965940-27965983)
chr1 (179-307)||(51410022-51410144)
chr1 (257-307)||(113362-113412)
chr1 (208-258)||(5376483-5376533)
chr1 (253-307)||(9690213-9690267)
chr1 (257-306)||(10577676-10577725)
chr1 (254-307)||(18190048-18190101)
chr1 (206-307)||(20157284-20157385)
chr1 (270-307)||(30359447-30359484)
chr1 (271-312)||(38078596-38078637)
[»] scaffold0003 (2 HSPs)
scaffold0003 (206-308)||(241618-241725)
scaffold0003 (257-307)||(236914-236964)
[»] scaffold0136 (1 HSPs)
scaffold0136 (206-307)||(3778-3884)
[»] scaffold0019 (1 HSPs)
scaffold0019 (206-307)||(71749-71855)
[»] chr8 (43 HSPs)
chr8 (206-307)||(22652000-22652106)
chr8 (206-307)||(15816058-15816164)
chr8 (206-307)||(29510233-29510339)
chr8 (206-307)||(22197671-22197777)
chr8 (206-308)||(29447468-29447575)
chr8 (206-307)||(8343340-8343446)
chr8 (253-303)||(5813657-5813707)
chr8 (241-307)||(8343020-8343086)
chr8 (253-307)||(18407784-18407838)
chr8 (206-306)||(29447040-29447145)
chr8 (206-258)||(2572039-2572091)
chr8 (219-307)||(21465449-21465542)
chr8 (258-307)||(30067968-30068017)
chr8 (253-305)||(3025616-3025668)
chr8 (253-308)||(26902103-26902158)
chr8 (219-258)||(27067283-27067322)
chr8 (237-307)||(34450961-34451036)
chr8 (253-307)||(11803335-11803389)
chr8 (253-295)||(22943301-22943343)
chr8 (264-302)||(31109463-31109501)
chr8 (257-307)||(36450694-36450744)
chr8 (257-307)||(39820498-39820547)
chr8 (262-307)||(17751730-17751775)
chr8 (262-307)||(17760717-17760762)
chr8 (206-307)||(24858036-24858135)
chr8 (253-305)||(926730-926782)
chr8 (257-305)||(44067596-44067644)
chr8 (254-305)||(20679337-20679388)
chr8 (272-307)||(31514938-31514973)
chr8 (258-309)||(40064032-40064083)
chr8 (253-304)||(40332256-40332307)
chr8 (253-307)||(3951476-3951530)
chr8 (253-307)||(4298830-4298882)
chr8 (254-308)||(12570437-12570491)
chr8 (254-308)||(12570663-12570717)
chr8 (253-307)||(14134764-14134818)
chr8 (219-257)||(24764809-24764847)
chr8 (270-308)||(25566912-25566950)
chr8 (272-309)||(11927013-11927050)
chr8 (263-308)||(13436909-13436954)
chr8 (206-251)||(24362192-24362237)
chr8 (206-251)||(25566865-25566910)
chr8 (258-307)||(27213595-27213644)
[»] chr3 (50 HSPs)
chr3 (218-307)||(41961579-41961673)
chr3 (206-307)||(27505270-27505370)
chr3 (206-307)||(34185052-34185158)
chr3 (168-307)||(55401062-55401194)
chr3 (206-305)||(4987222-4987326)
chr3 (207-307)||(17276750-17276846)
chr3 (206-307)||(14209137-14209243)
chr3 (210-306)||(14216920-14217021)
chr3 (210-306)||(14223049-14223150)
chr3 (244-307)||(8101892-8101955)
chr3 (257-315)||(11610578-11610636)
chr3 (206-305)||(28918025-28918120)
chr3 (206-306)||(34910341-34910435)
chr3 (253-307)||(10955017-10955074)
chr3 (253-308)||(20503530-20503585)
chr3 (257-312)||(25074864-25074919)
chr3 (256-307)||(40052380-40052431)
chr3 (241-307)||(40993275-40993346)
chr3 (206-283)||(14832123-14832205)
chr3 (206-307)||(28812539-28812645)
chr3 (206-308)||(14829713-14829821)
chr3 (253-306)||(15999951-16000004)
chr3 (241-305)||(25775557-25775624)
chr3 (258-302)||(1509637-1509681)
chr3 (253-309)||(18427014-18427070)
chr3 (206-257)||(1509563-1509614)
chr3 (210-307)||(15796223-15796325)
chr3 (257-307)||(21211363-21211413)
chr3 (253-307)||(35223003-35223057)
chr3 (206-307)||(49651716-49651821)
chr3 (206-307)||(55212987-55213092)
chr3 (258-307)||(4466540-4466589)
chr3 (271-307)||(4990912-4990948)
chr3 (254-306)||(8789489-8789541)
chr3 (272-308)||(8842413-8842449)
chr3 (256-308)||(9800119-9800171)
chr3 (168-245)||(14747548-14747625)
chr3 (271-311)||(21861658-21861698)
chr3 (237-305)||(24204983-24205051)
chr3 (257-312)||(3163966-3164021)
chr3 (253-308)||(14223787-14223841)
chr3 (264-307)||(14979225-14979268)
chr3 (210-308)||(16789040-16789142)
chr3 (257-307)||(2408590-2408640)
chr3 (206-240)||(10268487-10268521)
chr3 (254-308)||(11252042-11252096)
chr3 (259-309)||(33359826-33359876)
chr3 (257-307)||(52369856-52369906)
chr3 (253-306)||(15864898-15864950)
chr3 (253-306)||(32804485-32804538)
[»] scaffold0086 (1 HSPs)
scaffold0086 (206-307)||(2952-3058)
[»] scaffold0450 (1 HSPs)
scaffold0450 (206-308)||(8563-8670)
[»] scaffold0057 (1 HSPs)
scaffold0057 (209-307)||(24052-24155)
[»] scaffold0793 (1 HSPs)
scaffold0793 (253-314)||(4814-4875)
[»] scaffold0380 (1 HSPs)
scaffold0380 (253-307)||(8666-8720)
[»] scaffold0171 (1 HSPs)
scaffold0171 (206-307)||(23535-23641)
[»] scaffold0361 (1 HSPs)
scaffold0361 (253-310)||(14592-14649)
[»] scaffold0475 (1 HSPs)
scaffold0475 (264-312)||(3384-3432)
[»] scaffold0053 (1 HSPs)
scaffold0053 (253-308)||(8863-8918)
[»] scaffold0008 (1 HSPs)
scaffold0008 (207-305)||(263303-263406)
[»] scaffold0652 (1 HSPs)
scaffold0652 (241-306)||(403-473)
[»] scaffold0223 (1 HSPs)
scaffold0223 (206-249)||(20196-20239)
[»] scaffold0123 (1 HSPs)
scaffold0123 (206-308)||(44453-44560)
[»] scaffold0044 (1 HSPs)
scaffold0044 (206-300)||(53204-53303)
[»] scaffold0512 (1 HSPs)
scaffold0512 (253-307)||(4976-5030)
[»] scaffold0004 (1 HSPs)
scaffold0004 (208-306)||(92833-92940)
[»] scaffold0027 (1 HSPs)
scaffold0027 (272-307)||(46741-46776)
[»] scaffold0103 (1 HSPs)
scaffold0103 (257-311)||(51892-51946)
[»] scaffold0021 (1 HSPs)
scaffold0021 (253-307)||(2978-3032)
[»] scaffold0020 (1 HSPs)
scaffold0020 (257-307)||(135263-135313)
[»] scaffold0011 (1 HSPs)
scaffold0011 (259-308)||(17541-17590)


Alignment Details
Target: chr5 (Bit Score: 201; Significance: 1e-109; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 9 - 299
Target Start/End: Original strand, 17088118 - 17088402
Alignment:
Q  9 ttagattgtttgcattctatgtttt-tgggttattgattccatgtttattttttggaagctatttatattgacttatgtagaagcaatcgacacttcacg 107  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  17088118 ttagattgtttgcattctatgttttttgggttattgtttccatgtttattttttggaagctatttatattgacttatgtagaagcaattgacatttcacg 17088217  T
Q  108 tacattcatatttttgtccacaatgtccatatatctatgaagcactgatactgacagggcacactgatacaccgacacatctaataatttgnnnnnnntc 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       || |||| ||||||||||||||||||       ||    
T  17088218 tacattcatatttttgtccacaatgtccatatatctatgaagcactgatactgacagg-------gacacactgacacatctaataatttgaaaaaaatc 17088310  T
Q  208 acataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtg 299  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||    
T  17088311 acataatttagtgtgattacaagtgtcactgtcgtgtcggtgtcggtcacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtg 17088402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 165; E-Value: 7e-88
Query Start/End: Original strand, 363 - 564
Target Start/End: Original strand, 17088470 - 17088670
Alignment:
Q  363 gataactgtgatttgcatgatctatgcctccctatgctcctattcaggtcttgtagttctgtgttagtatcatcataaagtgctctagaaaaaattagag 462  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17088470 gataactgtgatttgcatgatctatgcctccctatgctcctattcaggtcttgtagttctgtgttagtatcatcataaagtgctctagaaaaaattagag 17088569  T
Q  463 agttgcctcttttctttgggatggtgaacttatttttgattttaaattatgnnnnnnnaagtcaattaacagaatttttacctaaaattagaagactctt 562  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||| |||||||||||||||||  ||||||||    
T  17088570 agttgcctcttttctttgggatggtgaacttatttttgattttaaattatgttttttaaagtcaattaacag-atttttacctaaaattaagagactctt 17088668  T
Q  563 cc 564  Q
    ||    
T  17088669 cc 17088670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 206 - 307
Target Start/End: Original strand, 39698565 - 39698671
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacacg-----tgtccgacactgggacacgcctaatcggaggagtgtccgtgc 300  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||||||||||     | |||||||| | ||||||||||||| |||||||||||||||    
T  39698565 tcacataattcagtgtaattacaagtgtcagtgtcgtgtcggtgtcggacacgacatgtatccgacaccgagacacgcctaatccgaggagtgtccgtgc 39698664  T
Q  301 ttcatag 307  Q
    |||||||    
T  39698665 ttcatag 39698671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 206 - 308
Target Start/End: Original strand, 31084347 - 31084448
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcat 305  Q
    |||||||||| | ||||||||||||||||  |||||||||||   || |||||||||||||||||||||| |||||||| |||||||||||||| |||||    
T  31084347 tcacataattcaatgtaattacaagtgtcgatgtcgtgtcggacacg-acacgtgtccgacactgggacatgcctaatccgaggagtgtccgtggttcat 31084445  T
Q  306 aga 308  Q
    |||    
T  31084446 aga 31084448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 168 - 307
Target Start/End: Complemental strand, 37328916 - 37328775
Alignment:
Q  168 acactgatacaccgacacatctaataatttgnnnnnnntcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacac---gtgtccg 264  Q
    ||||||||||||||||||| | |||||||||       ||||| |||| |||||||||||| |||||  |||||||||||||||||||||   | |||||    
T  37328916 acactgatacaccgacacagcaaataatttgtaaaaa-tcacaaaattcagtgtaattacatgtgtcggtgtcgtgtcggtgtcggacacgatgcgtccg 37328818  T
Q  265 acactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    | || |||| |||| ||||| ||||||||||||||||||||||    
T  37328817 ataccgggatacgcttaatccgaggagtgtccgtgcttcatag 37328775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 608 - 657
Target Start/End: Original strand, 17088667 - 17088716
Alignment:
Q  608 ttccatggctagagcttataaatttgaaatgaagtgttcatttgtttgga 657  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17088667 ttccatggctagagcttataaatttgaaatgaagtgttcatttgtttgga 17088716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 168 - 305
Target Start/End: Original strand, 19579688 - 19579829
Alignment:
Q  168 acactgatacaccgacacatctaataatttgnnnnnnntcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacacg-----tgtc 262  Q
    |||||||||| |||||||| |||||||||||       ||||||||||||||| |||||||||||||  ||||||||| ||||||||||||     ||||    
T  19579688 acactgatacgccgacacagctaataatttgagaaaa-tcacataatttagtgcaattacaagtgtcggtgtcgtgtcagtgtcggacacgacatatgtc 19579786  T
Q  263 cgacactgggacacgcctaatcggaggagtgtccgtgcttcat 305  Q
      |||| ||||||||||||||| ||||||||| |||| |||||    
T  19579787 taacaccgggacacgcctaatccgaggagtgtacgtgtttcat 19579829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 208 - 306
Target Start/End: Original strand, 21542056 - 21542159
Alignment:
Q  208 acataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcg-----gacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgctt 302  Q
    |||||||| ||||||||||||||||||  ||||||||||||||||     |||||||||||||||| |||||||||| ||||  |||| ||||||||| |    
T  21542056 acataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacgacacgtgtccgacaccgggacacgccgaatccaaggaatgtccgtgcat 21542155  T
Q  303 cata 306  Q
    ||||    
T  21542156 cata 21542159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 206 - 307
Target Start/End: Original strand, 7677729 - 7677835
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacacgt-----gtccgacactgggacacgcctaatcggaggagtgtccgtgc 300  Q
    |||||||||| |||| ||||| |||||||  ||||||||||||||| |||||||     ||||||||| ||||||||||||||| |||||| ||| ||||    
T  7677729 tcacataattcagtgcaattagaagtgtcggtgtcgtgtcggtgtctgacacgtcacatgtccgacaccgggacacgcctaatccgaggagagtcggtgc 7677828  T
Q  301 ttcatag 307  Q
    |||||||    
T  7677829 ttcatag 7677835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 253 - 307
Target Start/End: Complemental strand, 21576739 - 21576685
Alignment:
Q  253 gacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  21576739 gacacgtgtctgacactgggacacgcctaatccgaggagtgtccgtgcttcatag 21576685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 206 - 307
Target Start/End: Original strand, 35017061 - 35017162
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcat 305  Q
    ||||||||||||||||||||| | | |  | ||||||||| || | || ||||||||| |||  ||||||||||||||| ||||||||||||||||||||    
T  35017061 tcacataatttagtgtaattatatgggatagtgtcgtgtcagtattgggcacgtgtccaacatcgggacacgcctaatccgaggagtgtccgtgcttcat 35017160  T
Q  306 ag 307  Q
    ||    
T  35017161 ag 35017162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 207 - 307
Target Start/End: Original strand, 14873542 - 14873641
Alignment:
Q  207 cacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcata 306  Q
    |||||||||||||||||||| | |||||  |||| ||||||   |  |||||||||| |||| ||||||||||||||| |||||||||||||||||||||    
T  14873542 cacataatttagtgtaattatatgtgtcggtgtcatgtcggacgca-acacgtgtccaacaccgggacacgcctaatccgaggagtgtccgtgcttcata 14873640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 248 - 309
Target Start/End: Complemental strand, 19820389 - 19820326
Alignment:
Q  248 tgtcggacacg--tgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatagaa 309  Q
    |||||||||||  |||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  19820389 tgtcggacacgactgtccgacaccgggacacgcctaatcagaggagtgtccgtgcttcatagaa 19820326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 208 - 307
Target Start/End: Original strand, 21522776 - 21522880
Alignment:
Q  208 acataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcg-----gacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgctt 302  Q
    |||||||| ||||||||||||| ||||  ||||||||||||||||     |||||||||||| ||| |||||||||||||||  | |||||||||||| |    
T  21522776 acataattcagtgtaattacaattgtcggtgtcgtgtcggtgtcggacacgacacgtgtccggcaccgggacacgcctaatccaaagagtgtccgtgcat 21522875  T
Q  303 catag 307  Q
    |||||    
T  21522876 catag 21522880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 208 - 307
Target Start/End: Original strand, 21533342 - 21533446
Alignment:
Q  208 acataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcg-----gacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgctt 302  Q
    |||||||| ||||||||||||| ||||  ||||||||||||||||     |||||||||||| ||| |||||||||||||||  | |||||||||||| |    
T  21533342 acataattcagtgtaattacaattgtcggtgtcgtgtcggtgtcggacacgacacgtgtccggcaccgggacacgcctaatccaaagagtgtccgtgcat 21533441  T
Q  303 catag 307  Q
    |||||    
T  21533442 catag 21533446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 253 - 304
Target Start/End: Complemental strand, 39268592 - 39268541
Alignment:
Q  253 gacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttca 304  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  39268592 gacatgtgtccgacactgggacacgcctaatccgaggagtgtccgtgcttca 39268541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 206 - 309
Target Start/End: Complemental strand, 19552578 - 19552474
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacacgtgt---ccgacactgggacacgcctaatcggaggagtgtccgtgctt 302  Q
    |||||||||| ||||||  || |||||||  ||||||||||||||| |||| ||||   |||||||| |||||| ||||||| |||||||||||||| ||    
T  19552578 tcacataattaagtgta--tataagtgtcgatgtcgtgtcggtgtcagacaagtgttgtccgacacttggacacacctaatccgaggagtgtccgtgttt 19552481  T
Q  303 catagaa 309  Q
    |||||||    
T  19552480 catagaa 19552474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 254 - 305
Target Start/End: Complemental strand, 21191049 - 21190998
Alignment:
Q  254 acacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcat 305  Q
    ||||||||||||| | ||||||||||||||| ||||||||||||||||||||    
T  21191049 acacgtgtccgactccgggacacgcctaatccgaggagtgtccgtgcttcat 21190998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 237 - 314
Target Start/End: Complemental strand, 32766947 - 32766865
Alignment:
Q  237 tgtcgtgtcggtgtcg-----gacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatagaatatta 314  Q
    ||||||||||||||||     ||||||||||||||||  ||| ||| |||||| ||||||||||||||||||||||| |||||    
T  32766947 tgtcgtgtcggtgtcgaaaacgacacgtgtccgacaccaggatacgtctaatctgaggagtgtccgtgcttcatagattatta 32766865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 206 - 306
Target Start/End: Original strand, 3966527 - 3966632
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacac-----gtgtccgacactgggacacgcctaatcggaggagtgtccgtgc 300  Q
    ||||| |||| |||||||||| | |||||  ||||||||| |||||||||||     |||||| |||  |||||||| |||||| |||||||||||||||    
T  3966527 tcacacaattcagtgtaattatatgtgtcggtgtcgtgtcagtgtcggacacaacatgtgtccaacagagggacacgtctaatccgaggagtgtccgtgc 3966626  T
Q  301 ttcata 306  Q
    ||||||    
T  3966627 ttcata 3966632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 259 - 307
Target Start/End: Original strand, 17123119 - 17123166
Alignment:
Q  259 tgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  17123119 tgtccgacac-gggacacgcctaatccgaggagtgtccgtgcttcatag 17123166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 253 - 305
Target Start/End: Complemental strand, 23015978 - 23015926
Alignment:
Q  253 gacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcat 305  Q
    |||| |||||||||| |||||||||||||||| |||||||||||| |||||||    
T  23015978 gacatgtgtccgacattgggacacgcctaatccgaggagtgtccgagcttcat 23015926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 208 - 303
Target Start/End: Complemental strand, 36642795 - 36642696
Alignment:
Q  208 acataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacacg-----tgtccgacactgggacacgcctaatcggaggagtgtccgtgctt 302  Q
    ||||| |||||||||| || |||||||  |||| ||| |||||||||||||     |||||||||| |||||||||||||| ||||||||||| ||||||    
T  36642795 acatattttagtgtaaatataagtgtcggtgtcatgttggtgtcggacacgacacgtgtccgacac-gggacacgcctaattggaggagtgtcggtgctt 36642697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 241 - 307
Target Start/End: Original strand, 43564929 - 43565000
Alignment:
Q  241 gtgtcggtgtcggacacg-----tgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    ||||||||||||||||||     |||||||| | ||||||||||||||| ||| ||||||||||||||||||    
T  43564929 gtgtcggtgtcggacacgacatgtgtccgacgccgggacacgcctaatccgagaagtgtccgtgcttcatag 43565000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 258 - 308
Target Start/End: Original strand, 4105329 - 4105379
Alignment:
Q  258 gtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcataga 308  Q
    ||||| || |||||||||||||||||| |||||||||||||||||| ||||    
T  4105329 gtgtctgatactgggacacgcctaatccgaggagtgtccgtgcttcgtaga 4105379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 253 - 303
Target Start/End: Original strand, 30183625 - 30183675
Alignment:
Q  253 gacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttc 303  Q
    |||||||||||||||||||||||||||||||  ||| |||||| |||||||    
T  30183625 gacacgtgtccgacactgggacacgcctaattcgagaagtgtctgtgcttc 30183675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 254 - 308
Target Start/End: Original strand, 42893426 - 42893480
Alignment:
Q  254 acacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcataga 308  Q
    |||||||||||||||  |||||||||||||  ||||||||||| |||||||||||    
T  42893426 acacgtgtccgacaccaggacacgcctaatatgaggagtgtccatgcttcataga 42893480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 253 - 314
Target Start/End: Complemental strand, 16304420 - 16304359
Alignment:
Q  253 gacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatagaatatta 314  Q
    |||||||| ||||||| | |||||| |||||| ||||| |||||||||||||||| ||||||    
T  16304420 gacacgtgcccgacaccgagacacgtctaatccgaggaatgtccgtgcttcatagtatatta 16304359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 271 - 308
Target Start/End: Complemental strand, 22423800 - 22423763
Alignment:
Q  271 ggacacgcctaatcggaggagtgtccgtgcttcataga 308  Q
    |||||||||||||| |||||||||||||||||||||||    
T  22423800 ggacacgcctaatccgaggagtgtccgtgcttcataga 22423763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 208 - 305
Target Start/End: Original strand, 43001826 - 43001922
Alignment:
Q  208 acataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcat 305  Q
    |||||||| |||||||||||||||||   ||  |||||||   || |||||||||  ||||  |||||||||||||| ||||||||||||||||||||    
T  43001826 acataattcagtgtaattacaagtgttggtgatgtgtcggacacg-acacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 43001922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 271 - 307
Target Start/End: Original strand, 10298633 - 10298669
Alignment:
Q  271 ggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    |||||||||||||| ||||||||||||||||||||||    
T  10298633 ggacacgcctaatccgaggagtgtccgtgcttcatag 10298669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 255 - 307
Target Start/End: Complemental strand, 17593715 - 17593663
Alignment:
Q  255 cacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    ||||||||| |||| ||||||||| ||||| ||||||||||||| ||||||||    
T  17593715 cacgtgtccaacaccgggacacgcttaatccgaggagtgtccgtacttcatag 17593663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 168 - 257
Target Start/End: Complemental strand, 21351977 - 21351889
Alignment:
Q  168 acactgatacaccgacacatctaataatttgnnnnnnntcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacac 257  Q
    ||||||| ||||||||||| ||||||||| |       |||||||||| ||||||||||||||||||  |||| |||||||||| |||||    
T  21351977 acactgacacaccgacacaactaataatt-ggaaaaagtcacataattcagtgtaattacaagtgtcggtgtcatgtcggtgtccgacac 21351889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 253 - 305
Target Start/End: Complemental strand, 24238655 - 24238603
Alignment:
Q  253 gacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcat 305  Q
    ||||||||||| ||||||||||| || |||||  |||||||||||||||||||    
T  24238655 gacacgtgtccaacactgggacatgcataatcctaggagtgtccgtgcttcat 24238603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 259 - 307
Target Start/End: Complemental strand, 38464361 - 38464313
Alignment:
Q  259 tgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    |||||||||| ||||||| ||||||| |||||||||| |||||||||||    
T  38464361 tgtccgacaccgggacacacctaatccgaggagtgtctgtgcttcatag 38464313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 307
Target Start/End: Original strand, 11685966 - 11686068
Alignment:
Q  209 cataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacacg-----tgtccgacactgggacacgcctaatcggaggagtgtccgtgcttc 303  Q
    |||||||||||||||||| | |||||  |||||| |||||||||||||||     ||||| | ||   | |||| |||||||||||||||||||||||||    
T  11685966 cataatttagtgtaattatatgtgtcggtgtcgt-tcggtgtcggacacgacacgtgtccaaaaccaaggcacggctaatcggaggagtgtccgtgcttc 11686064  T
Q  304 atag 307  Q
    ||||    
T  11686065 atag 11686068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 258 - 305
Target Start/End: Complemental strand, 21351899 - 21351852
Alignment:
Q  258 gtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcat 305  Q
    |||||||||||||| ||||| |||||| || |||||||||||||||||    
T  21351899 gtgtccgacactggaacacgtctaatccgaagagtgtccgtgcttcat 21351852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 257 - 307
Target Start/End: Original strand, 2419936 - 2419986
Alignment:
Q  257 cgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    |||||||||| | ||||||| ||||||| || |||||||||||||||||||    
T  2419936 cgtgtccgaccccgggacacacctaatccgatgagtgtccgtgcttcatag 2419986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 257 - 307
Target Start/End: Original strand, 2436980 - 2437030
Alignment:
Q  257 cgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    ||||||||||||   ||||||||||||| ||||||||| ||||||||||||    
T  2436980 cgtgtccgacaccaagacacgcctaatccgaggagtgttcgtgcttcatag 2437030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 217 - 306
Target Start/End: Original strand, 6401533 - 6401627
Alignment:
Q  217 agtgtaattacaagtgtcactgtcgtgtcggtgtcggacacg-----tgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcata 306  Q
    |||||||||| | |||||  ||||||||| ||||||||||||     |||| ||||| |||| |||||| |||  ||||||||||||||||||||    
T  6401533 agtgtaattatatgtgtcggtgtcgtgtcagtgtcggacacgacacgtgtctgacacggggatacgccttatccaaggagtgtccgtgcttcata 6401627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 253 - 295
Target Start/End: Original strand, 15382550 - 15382592
Alignment:
Q  253 gacacgtgtccgacactgggacacgcctaatcggaggagtgtc 295  Q
    ||||| |||||||||| ||||||||||||||| ||||||||||    
T  15382550 gacacatgtccgacaccgggacacgcctaatccgaggagtgtc 15382592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 253 - 307
Target Start/End: Complemental strand, 21194117 - 21194063
Alignment:
Q  253 gacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    ||||| |||| ||||| ||| ||||||||||| ||||||||||||||||| ||||    
T  21194117 gacacatgtcagacaccggggcacgcctaatccgaggagtgtccgtgctttatag 21194063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 253 - 307
Target Start/End: Original strand, 30098402 - 30098456
Alignment:
Q  253 gacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    |||||||||| |||||  |||||| ||||||| ||||| ||||||||||||||||    
T  30098402 gacacgtgtcagacaccaggacacacctaatccgaggaatgtccgtgcttcatag 30098456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 241 - 305
Target Start/End: Complemental strand, 30502399 - 30502330
Alignment:
Q  241 gtgtcggtgtcggacacg-----tgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcat 305  Q
    ||||||||||||||||||     ||||||||||||||||| ||||||||  |||| ||| ||||||||||    
T  30502399 gtgtcggtgtcggacacgacacatgtccgacactgggacatgcctaatccaaggattgttcgtgcttcat 30502330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 241 - 305
Target Start/End: Complemental strand, 30542742 - 30542673
Alignment:
Q  241 gtgtcggtgtcggacacg-----tgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcat 305  Q
    ||||||||||||||||||     ||||||||||||||||| ||||||||  |||| ||| ||||||||||    
T  30542742 gtgtcggtgtcggacacgacacatgtccgacactgggacatgcctaatccaaggattgttcgtgcttcat 30542673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 258 - 307
Target Start/End: Complemental strand, 39695999 - 39695951
Alignment:
Q  258 gtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    ||||||||||| |||||||||||||||  ||||||||| |||||||||||    
T  39695999 gtgtccgacac-gggacacgcctaatcctaggagtgtcggtgcttcatag 39695951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 72; Significance: 2e-32; HSPs: 51)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 418 - 624
Target Start/End: Original strand, 26633554 - 26633761
Alignment:
Q  418 gttctgtgttagtatcatcataaagtgctctagaaaaaattagagag--ttgcctcttttctttgggatggtgaacttatttttgattttaaattatgnn 515  Q
    |||||||| |||||| ||||| ||||||||| || ||||||||||||  || |||||||||||||||||||||||||||||||| |||||||||| ||      
T  26633554 gttctgtgctagtataatcatcaagtgctctggagaaaattagagagagttacctcttttctttgggatggtgaacttattttttattttaaattgtg-t 26633652  T
Q  516 nnnnnaagtcaattaacagaatttttacctaaaattagaagactcttcccatccttttaaattgaaaaattaagttcatgtcatgaccagctttccatgg 615  Q
         | ||||| |||  ||||||||| || |||||| || | || ||  ||||| |||||||||||||||||||||||||||| | ||| |||||||||    
T  26633653 tttttaggtcaagtaaatgaatttttatctcaaattaaaatattcctctgatcctcttaaattgaaaaattaagttcatgtcataaacagttttccatgg 26633752  T
Q  616 ctagagctt 624  Q
    ||| |||||    
T  26633753 ctatagctt 26633761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 418 - 624
Target Start/End: Original strand, 26739530 - 26739737
Alignment:
Q  418 gttctgtgttagtatcatcataaagtgctctagaaaaaattagagag--ttgcctcttttctttgggatggtgaacttatttttgattttaaattatgnn 515  Q
    |||||||| |||||| ||||| ||||||||| || ||||||||||||  || |||||||||||||||||||||||||||||||| |||||||||| ||      
T  26739530 gttctgtgctagtataatcatcaagtgctctggagaaaattagagagagttacctcttttctttgggatggtgaacttattttttattttaaattgtg-t 26739628  T
Q  516 nnnnnaagtcaattaacagaatttttacctaaaattagaagactcttcccatccttttaaattgaaaaattaagttcatgtcatgaccagctttccatgg 615  Q
         | ||||| |||  ||||||||| || |||||| || | || ||  ||||| |||||||||||||||||||||||||||| | ||| |||||||||    
T  26739629 tttttaggtcaagtaaatgaatttttatctcaaattaaaatattcctctgatcctcttaaattgaaaaattaagttcatgtcataaacagttttccatgg 26739728  T
Q  616 ctagagctt 624  Q
    ||| |||||    
T  26739729 ctatagctt 26739737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 206 - 307
Target Start/End: Complemental strand, 10339161 - 10339054
Alignment:
Q  206 tcacataatttagtgt-aattacaagtgtcactgtcgtgtcggtgtcggacacg-----tgtccgacactgggacacgcctaatcggaggagtgtccgtg 299  Q
    |||||||||| ||||| ||||| | |||||| || |||||||||||||||||||     |||||||||||||||||||||||||||||||||||||||||    
T  10339161 tcacataattcagtgttaattatatgtgtcagtgccgtgtcggtgtcggacacgacacatgtccgacactgggacacgcctaatcggaggagtgtccgtg 10339062  T
Q  300 cttcatag 307  Q
    ||||||||    
T  10339061 cttcatag 10339054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 206 - 307
Target Start/End: Complemental strand, 8365554 - 8365448
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacacg-----tgtccgacactgggacacgcctaatcggaggagtgtccgtgc 300  Q
    ||||||||||  |||||||||||||||||  |||||||||||| |||||||||     |||||||||||||||||||||||||| ||||||| |||||||    
T  8365554 tcacataattcggtgtaattacaagtgtcggtgtcgtgtcggtatcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtctccgtgc 8365455  T
Q  301 ttcatag 307  Q
    |||||||    
T  8365454 ttcatag 8365448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 206 - 307
Target Start/End: Original strand, 16766721 - 16766827
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcgg-----acacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgc 300  Q
    |||||||||| ||||||||||||||||||  |||||||||||||||||     ||||||||||||||| ||||||||||||||| || || |||||||||    
T  16766721 tcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacaacacgtgtccgacaccgggacacgcctaatccgaagaatgtccgtgc 16766820  T
Q  301 ttcatag 307  Q
    |||||||    
T  16766821 ttcatag 16766827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 206 - 308
Target Start/End: Complemental strand, 9107405 - 9107298
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacac-----gtgtccgacactgggacacgcctaatcggaggagtgtccgtgc 300  Q
    ||||| |||| ||||||||||||||||||  |||||||||||||||||||||     ||||||||||| ||||||| ||||||| |||||||| ||||||    
T  9107405 tcacaaaattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacaacgtgtgtccgacaccgggacacacctaatccgaggagtgcccgtgc 9107306  T
Q  301 ttcataga 308  Q
    ||||||||    
T  9107305 ttcataga 9107298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 206 - 307
Target Start/End: Complemental strand, 17327690 - 17327590
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcat 305  Q
    |||||||||||||||||| || | |||||| |||||||||||   || ||||||||| ||||| ||||||||||||||| ||||||||||||||||||||    
T  17327690 tcacataatttagtgtaactatatgtgtcagtgtcgtgtcggacacg-acacgtgtctgacacagggacacgcctaatccgaggagtgtccgtgcttcat 17327592  T
Q  306 ag 307  Q
    ||    
T  17327591 ag 17327590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 463 - 629
Target Start/End: Complemental strand, 27701720 - 27701553
Alignment:
Q  463 agttgcctcttttctttgggat--ggtgaacttatttttgattttaaattatgnnnnnnnaagtcaattaacagaatttttacctaaaattagaagactc 560  Q
    |||| |||||||||||||||||  ||||||||||||||| ||||||||   ||       |||||||||||  |||||||||||| |||||| || | ||    
T  27701720 agttacctcttttctttgggatatggtgaacttatttttcattttaaagcgtgtttttt-aagtcaattaaatgaatttttacctcaaattaaaacattc 27701622  T
Q  561 ttcccatccttttaaattgaaaaattaagttcatgtcatgaccagctttccatggctagagcttataaa 629  Q
     ||  ||||| |||| || |||||||||||||||||||||||||| |||||||||||| ||||| ||||    
T  27701621 ctctgatcctcttaatttcaaaaattaagttcatgtcatgaccagttttccatggctatagcttgtaaa 27701553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 142 - 306
Target Start/End: Complemental strand, 17841686 - 17841530
Alignment:
Q  142 ctatgaagcactgatactgacagggcacactgatacaccgacacatctaataatttgnnnnnnntcacataatttagtgtaattacaagtgtcactgtcg 241  Q
    ||||||||||||||||| |||| || ||||||| || |||||||| |||||||||||       ||||||||||||||||||||||||||| |      |    
T  17841686 ctatgaagcactgatacggacacgg-acactgacacgccgacacagctaataatttgaaaaaa-tcacataatttagtgtaattacaagtgacg-----g 17841594  T
Q  242 tgtcggtgtcggacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcata 306  Q
    ||||||   || ||| ||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  17841593 tgtcggacacg-acatgtgtccgacactgagacacgcctaatccgaggagtgtccgtgcttcata 17841530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 206 - 306
Target Start/End: Original strand, 31384944 - 31385048
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggaca-----cgtgtccgacactgggacacgcctaatcggaggagtgtccgtgc 300  Q
    |||||||||| ||||||||||||||||||| |||||||| | ||| |||||     ||||||| |||| |||||||||||||||  ||||||||||||||    
T  31384944 tcacataattcagtgtaattacaagtgtcagtgtcgtgtag-tgttggacacgacacgtgtcctacaccgggacacgcctaatccaaggagtgtccgtgc 31385042  T
Q  301 ttcata 306  Q
    ||||||    
T  31385043 ttcata 31385048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 206 - 307
Target Start/End: Complemental strand, 10770709 - 10770607
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcgg-acacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttca 304  Q
    |||||||||| ||||||||||||||||||  ||||||||| |   ||  ||||||||||||  | |||||| |||||||| |||||||||||||||||||    
T  10770709 tcacataattcagtgtaattacaagtgtcggtgtcgtgtcagacacgacacacgtgtccgatgccgggacatgcctaatctgaggagtgtccgtgcttca 10770610  T
Q  305 tag 307  Q
    |||    
T  10770609 tag 10770607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 208 - 305
Target Start/End: Original strand, 12696350 - 12696446
Alignment:
Q  208 acataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcat 305  Q
    |||||||| ||||||||||||||||||| |||||||||||   | |||||||||| ||||| ||||||| ||| |||  ||||||||| |||||||||    
T  12696350 acataattcagtgtaattacaagtgtcagtgtcgtgtcggacac-gacacgtgtctgacaccgggacacaccttatccaaggagtgtctgtgcttcat 12696446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 206 - 308
Target Start/End: Original strand, 8714004 - 8714111
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacacg-----tgtccgacactgggacacgcctaatcggaggagtgtccgtgc 300  Q
    |||||||||| ||||||||||||| |||   ||||||||||||||||||||||     | |||||||  |||||||||| |||| ||||||||||  |||    
T  8714004 tcacataattcagtgtaattacaaatgtgggtgtcgtgtcggtgtcggacacgacacatttccgacatcgggacacgcccaatccgaggagtgtctttgc 8714103  T
Q  301 ttcataga 308  Q
    ||||||||    
T  8714104 ttcataga 8714111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 206 - 284
Target Start/End: Original strand, 9522915 - 9522998
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcg-----gacacgtgtccgacactgggacacgcctaatc 284  Q
    |||||||||| ||||||||||||||||||  ||| ||||||||||||     |||||||||||||||| | |||||||||||||    
T  9522915 tcacataattcagtgtaattacaagtgtcggtgttgtgtcggtgtcggatccgacacgtgtccgacaccgagacacgcctaatc 9522998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 253 - 308
Target Start/End: Original strand, 34595199 - 34595254
Alignment:
Q  253 gacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcataga 308  Q
    |||||||||| ||||| ||||||| ||||||| |||||||||||||||||||||||    
T  34595199 gacacgtgtctgacaccgggacacacctaatccgaggagtgtccgtgcttcataga 34595254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 253 - 307
Target Start/End: Complemental strand, 8776962 - 8776908
Alignment:
Q  253 gacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    |||||||||||||||| | ||||| ||||||| ||||||||||||||||||||||    
T  8776962 gacacgtgtccgacaccgagacacacctaatccgaggagtgtccgtgcttcatag 8776908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 253 - 307
Target Start/End: Original strand, 28152163 - 28152217
Alignment:
Q  253 gacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    |||||||||||||||| |||||| |||||||| ||||||||| ||||||||||||    
T  28152163 gacacgtgtccgacaccgggacaggcctaatccgaggagtgttcgtgcttcatag 28152217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 208 - 257
Target Start/End: Complemental strand, 21395341 - 21395292
Alignment:
Q  208 acataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacac 257  Q
    |||||||||||||||||||||||||||  ||||||||| |||||||||||    
T  21395341 acataatttagtgtaattacaagtgtcggtgtcgtgtcagtgtcggacac 21395292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 253 - 306
Target Start/End: Original strand, 31959215 - 31959268
Alignment:
Q  253 gacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcata 306  Q
    |||| ||||||||||| ||||||| ||||||| |||||||||||||||||||||    
T  31959215 gacatgtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 31959268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 259 - 307
Target Start/End: Complemental strand, 13360361 - 13360313
Alignment:
Q  259 tgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    |||||||||||| ||||||||||||| || |||||||||||||||||||    
T  13360361 tgtccgacactgagacacgcctaatccgaagagtgtccgtgcttcatag 13360313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 208 - 307
Target Start/End: Original strand, 17435225 - 17435329
Alignment:
Q  208 acataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcg-----gacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgctt 302  Q
    |||||||| ||||||||||||||||| | |||  ||||| |||||     ||||||||| ||||||||||||||| |||||| ||  ||||||||| |||    
T  17435225 acataattcagtgtaattacaagtgttagtgttttgtcgatgtcggacacgacacgtgttcgacactgggacacgtctaatctgaaaagtgtccgtactt 17435324  T
Q  303 catag 307  Q
    |||||    
T  17435325 catag 17435329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 241 - 307
Target Start/End: Original strand, 4877991 - 4878061
Alignment:
Q  241 gtgtcggtgtcggacacg-----tgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    ||||||||||||||||||     |||||||||| || |||||||||||| ||||||||||||||||||||||    
T  4877991 gtgtcggtgtcggacacgacacatgtccgacacagg-acacgcctaatccgaggagtgtccgtgcttcatag 4878061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 206 - 308
Target Start/End: Complemental strand, 5970143 - 5970036
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacacg-----tgtccgacactgggacacgcctaatcggaggagtgtccgtgc 300  Q
    |||||||||| ||||||||||||| |||   ||||||||||||||||||||||     | |||||||  |||||||||| |||| |||||||| |  |||    
T  5970143 tcacataattcagtgtaattacaaatgtgggtgtcgtgtcggtgtcggacacgacacatttccgacatcgggacacgcccaatccgaggagtgactatgc 5970044  T
Q  301 ttcataga 308  Q
    ||||||||    
T  5970043 ttcataga 5970036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 261 - 312
Target Start/End: Original strand, 7378052 - 7378103
Alignment:
Q  261 tccgacactgggacacgcctaatcggaggagtgtccgtgcttcatagaatat 312  Q
    |||||||| |||||||| |||||| ||| |||||||||||||||||||||||    
T  7378052 tccgacaccgggacacggctaatctgagaagtgtccgtgcttcatagaatat 7378103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 257 - 304
Target Start/End: Complemental strand, 9025495 - 9025448
Alignment:
Q  257 cgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttca 304  Q
    |||||||||||| ||||||||||||||| ||| |||||||||||||||    
T  9025495 cgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttca 9025448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 217 - 307
Target Start/End: Original strand, 18367871 - 18367966
Alignment:
Q  217 agtgtaattacaagtgtcactgtcgtgtcggtgtcggacacg-----tgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    |||||||||| | |||||  ||||||||||||||| ||||||     |||| ||||| ||||||||||| |||  |||||||||||||||||||||    
T  18367871 agtgtaattatatgtgtcggtgtcgtgtcggtgtcagacacgacacatgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 18367966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 241 - 284
Target Start/End: Original strand, 34172241 - 34172284
Alignment:
Q  241 gtgtcggtgtcggacacgtgtccgacactgggacacgcctaatc 284  Q
    ||||||||||||||||||||||||||||  ||||||||||||||    
T  34172241 gtgtcggtgtcggacacgtgtccgacaccaggacacgcctaatc 34172284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 238 - 307
Target Start/End: Original strand, 7248414 - 7248488
Alignment:
Q  238 gtcgtgtcggtgtcggacac-----gtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    ||||||||||||| ||||||     ||||||||||| |||||||| | |||| ||||||||||||||||||||||    
T  7248414 gtcgtgtcggtgttggacacaacatgtgtccgacaccgggacacgtcaaatccgaggagtgtccgtgcttcatag 7248488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 258 - 304
Target Start/End: Complemental strand, 8389457 - 8389411
Alignment:
Q  258 gtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttca 304  Q
    ||||||||||| ||||||| ||||||| |||||||||||||||||||    
T  8389457 gtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttca 8389411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 258 - 307
Target Start/End: Original strand, 7938170 - 7938219
Alignment:
Q  258 gtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    ||||||||||| | ||||||||| ||| ||||||||||||||||||||||    
T  7938170 gtgtccgacaccgagacacgcctgatccgaggagtgtccgtgcttcatag 7938219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 258 - 307
Target Start/End: Original strand, 9629464 - 9629513
Alignment:
Q  258 gtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    ||||||||||||| |||||| |||||| ||||||||||| ||||||||||    
T  9629464 gtgtccgacactgagacacgtctaatccgaggagtgtccatgcttcatag 9629513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 264 - 305
Target Start/End: Complemental strand, 26178661 - 26178620
Alignment:
Q  264 gacactgggacacgcctaatcggaggagtgtccgtgcttcat 305  Q
    ||||| |||||||||||||||||||||||||| |||||||||    
T  26178661 gacaccgggacacgcctaatcggaggagtgtctgtgcttcat 26178620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 274 - 307
Target Start/End: Complemental strand, 32511639 - 32511606
Alignment:
Q  274 cacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    ||||||||||||||||||||||||||||||||||    
T  32511639 cacgcctaatcggaggagtgtccgtgcttcatag 32511606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 271 - 307
Target Start/End: Complemental strand, 426514 - 426478
Alignment:
Q  271 ggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    |||||||||||||| ||||||||||||||||||||||    
T  426514 ggacacgcctaatctgaggagtgtccgtgcttcatag 426478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 271 - 307
Target Start/End: Original strand, 2117139 - 2117175
Alignment:
Q  271 ggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    ||||| |||||||||||||||||||||||||||||||    
T  2117139 ggacatgcctaatcggaggagtgtccgtgcttcatag 2117175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 179 - 308
Target Start/End: Original strand, 3209379 - 3209519
Alignment:
Q  179 ccgacacatctaataatttgnnnnnnntcacataatttagtgtaattacaagtgtcactgtcg------tgtcggtgtcg-----gacacgtgtccgaca 267  Q
    |||||||| |||||||||||       |||||||||||||||| ||||||||||||  |||||      |||| ||||||     |||||| ||||||||    
T  3209379 ccgacacagctaataatttgaaaaaaatcacataatttagtgttattacaagtgtcggtgtcggtgtcgtgtcagtgtcgaacacgacacgcgtccgaca 3209478  T
Q  268 ctgggacacgcctaatcggaggagtgtccgtgcttcataga 308  Q
    |  |||||||||||||| |||||||||  ||||||||||||    
T  3209479 cccggacacgcctaatccgaggagtgtttgtgcttcataga 3209519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 241 - 304
Target Start/End: Complemental strand, 32978910 - 32978842
Alignment:
Q  241 gtgtcggtgtcggacacg-----tgtccgacactgggacacgcctaatcggaggagtgtccgtgcttca 304  Q
    ||||||||||||||||||     |||||||||| |||||||| ||||||  ||||||||||||||||||    
T  32978910 gtgtcggtgtcggacacgacacatgtccgacaccgggacacgtctaatccaaggagtgtccgtgcttca 32978842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 264 - 312
Target Start/End: Original strand, 34446647 - 34446695
Alignment:
Q  264 gacactgggacacgcctaatcggaggagtgtccgtgcttcatagaatat 312  Q
    ||||||||||||| |||||||  ||||||||||||||||||||| ||||    
T  34446647 gacactgggacacacctaatccaaggagtgtccgtgcttcatagtatat 34446695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 259 - 307
Target Start/End: Complemental strand, 34895016 - 34894968
Alignment:
Q  259 tgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    |||||||||| ||||||| ||||||  ||||||||||||||||||||||    
T  34895016 tgtccgacacagggacacacctaatatgaggagtgtccgtgcttcatag 34894968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 255
Target Start/End: Complemental strand, 16111790 - 16111743
Alignment:
Q  208 acataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggac 255  Q
    ||||||||||||||||||| | |||||| ||||||||||| |||||||    
T  16111790 acataatttagtgtaattataggtgtcagtgtcgtgtcggagtcggac 16111743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 273 - 307
Target Start/End: Complemental strand, 7723233 - 7723199
Alignment:
Q  273 acacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    |||||||||||| ||||||||||||||||||||||    
T  7723233 acacgcctaatccgaggagtgtccgtgcttcatag 7723199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 243 - 304
Target Start/End: Complemental strand, 7996387 - 7996325
Alignment:
Q  243 gtcggtgtcg-gacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttca 304  Q
    |||||||||| ||||||||||  |||| |||||||||||||||  |||||| |||||||||||    
T  7996387 gtcggtgtcgcgacacgtgtctaacacggggacacgcctaatccaaggagtctccgtgcttca 7996325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 243 - 304
Target Start/End: Original strand, 8022414 - 8022476
Alignment:
Q  243 gtcggtgtcg-gacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttca 304  Q
    |||||||||| ||||||||||  |||| |||||||||||||||  |||||| |||||||||||    
T  8022414 gtcggtgtcgcgacacgtgtctaacacggggacacgcctaatccaaggagtctccgtgcttca 8022476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 269 - 307
Target Start/End: Complemental strand, 8805562 - 8805524
Alignment:
Q  269 tgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    ||||||| |||||||| ||||||||||||||||||||||    
T  8805562 tgggacatgcctaatccgaggagtgtccgtgcttcatag 8805524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 241 - 295
Target Start/End: Complemental strand, 16388228 - 16388175
Alignment:
Q  241 gtgtcggtgtcggacacgtgtccgacactgggacacgcctaatcggaggagtgtc 295  Q
    |||||||||||||||||| |  |||||||||||||||||||||| ||||| ||||    
T  16388228 gtgtcggtgtcggacacg-gcacgacactgggacacgcctaatccgaggactgtc 16388175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 253 - 295
Target Start/End: Complemental strand, 21044868 - 21044826
Alignment:
Q  253 gacacgtgtccgacactgggacacgcctaatcggaggagtgtc 295  Q
    |||| |||||||||||||||||||||||||||  |||||||||    
T  21044868 gacatgtgtccgacactgggacacgcctaatctaaggagtgtc 21044826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 253 - 295
Target Start/End: Complemental strand, 21068126 - 21068084
Alignment:
Q  253 gacacgtgtccgacactgggacacgcctaatcggaggagtgtc 295  Q
    |||| |||||||||||||||||||||||||||  |||||||||    
T  21068126 gacatgtgtccgacactgggacacgcctaatctaaggagtgtc 21068084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 253 - 307
Target Start/End: Original strand, 28715360 - 28715414
Alignment:
Q  253 gacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    ||||||||| |||||| ||||||||||||||  ||| ||||| ||||||||||||    
T  28715360 gacacgtgttcgacaccgggacacgcctaattcgagaagtgtacgtgcttcatag 28715414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 206 - 256
Target Start/End: Complemental strand, 33340420 - 33340370
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggaca 256  Q
    ||||||| |||| |||||||| |||||||| ||||||| ||||||||||||    
T  33340420 tcacatattttactgtaattataagtgtcattgtcgtgccggtgtcggaca 33340370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 206 - 256
Target Start/End: Original strand, 35125678 - 35125728
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggaca 256  Q
    ||||||| |||| |||||||| |||||||| ||||||| ||||||||||||    
T  35125678 tcacatattttactgtaattataagtgtcattgtcgtgccggtgtcggaca 35125728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 219 - 307
Target Start/End: Original strand, 10294144 - 10294237
Alignment:
Q  219 tgtaattacaagtgtcactgtcgtgtcggtgtcggacacg-----tgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    |||||||| | |||||  |||||||| |||||||||||||     ||||||| ||| ||||||  |||||| |||||||||| |||||||||||    
T  10294144 tgtaattatatgtgtcggtgtcgtgttggtgtcggacacgacatgtgtccgaaactaggacacagctaatctgaggagtgtctgtgcttcatag 10294237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 2e-26; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 206 - 304
Target Start/End: Original strand, 28084546 - 28084640
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttca 304  Q
    |||||||||| | ||||||||||||||||  |||||||||||||    ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  28084546 tcacataattcaatgtaattacaagtgtctgtgtcgtgtcggtg----acacgtgtccgacactgggacacgcctaatccgaggagtgtccgtgcttca 28084640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 209 - 306
Target Start/End: Complemental strand, 3947798 - 3947702
Alignment:
Q  209 cataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcata 306  Q
    ||||||| ||||||||||||||||||| |||||||||||   || |||||||||||||||  |||||| ||||||| |||||||||||||||||||||    
T  3947798 cataattcagtgtaattacaagtgtcagtgtcgtgtcggacacg-acacgtgtccgacaccaggacacacctaatccgaggagtgtccgtgcttcata 3947702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 241 - 308
Target Start/End: Original strand, 42640577 - 42640644
Alignment:
Q  241 gtgtcggtgtcggacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcataga 308  Q
    |||||||||||||||||||||||| |||  |||||||||||||| ||||||| |||||||||||||||    
T  42640577 gtgtcggtgtcggacacgtgtccggcaccaggacacgcctaatccgaggagtttccgtgcttcataga 42640644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 206 - 307
Target Start/End: Original strand, 19482692 - 19482798
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcg-----gacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgc 300  Q
    ||||||||||  ||||||||||||||||   |||||||||||| | |     |||||||||||||||||||||||| ||||||| ||||||||| |||||    
T  19482692 tcacataattcggtgtaattacaagtgttggtgtcgtgtcggtattggacacgacacgtgtccgacactgggacacacctaatccgaggagtgttcgtgc 19482791  T
Q  301 ttcatag 307  Q
    |||||||    
T  19482792 ttcatag 19482798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 253 - 307
Target Start/End: Complemental strand, 23292980 - 23292926
Alignment:
Q  253 gacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  23292980 gacacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 23292926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 253 - 314
Target Start/End: Complemental strand, 715599 - 715538
Alignment:
Q  253 gacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatagaatatta 314  Q
    ||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||    
T  715599 gacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatagattatta 715538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 253 - 314
Target Start/End: Complemental strand, 752925 - 752864
Alignment:
Q  253 gacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatagaatatta 314  Q
    ||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||    
T  752925 gacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatagattatta 752864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 206 - 306
Target Start/End: Complemental strand, 30982913 - 30982808
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtc-----ggacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgc 300  Q
    ||||||| || |||||||||| |||||||  |||||||||||||||      |||||||||||||||| |||||||||||||||  | ||||||||||||    
T  30982913 tcacatatttcagtgtaattataagtgtcggtgtcgtgtcggtgtcagacacgacacgtgtccgacaccgggacacgcctaatccaaagagtgtccgtgc 30982814  T
Q  301 ttcata 306  Q
    ||||||    
T  30982813 ttcata 30982808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 253 - 308
Target Start/End: Original strand, 29205533 - 29205588
Alignment:
Q  253 gacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcataga 308  Q
    ||||| |||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  29205533 gacacatgtccgacactgggacacgcctaatccgaggagtgttcgtgcttcataga 29205588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 206 - 306
Target Start/End: Original strand, 4383391 - 4383484
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcat 305  Q
    |||||||||| ||||||||||||| ||||| |||||||||||||||  |||      ||||||  |||||||||||||| ||||||||||||||||||||    
T  4383391 tcacataattcagtgtaattacaaatgtcagtgtcgtgtcggtgtcaaaca------cgacac-cggacacgcctaatccgaggagtgtccgtgcttcat 4383483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 253 - 306
Target Start/End: Complemental strand, 14465059 - 14465006
Alignment:
Q  253 gacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcata 306  Q
    ||||||||| ||||||||||||||| |||||| |||||||||||||||||||||    
T  14465059 gacacgtgttcgacactgggacacgtctaatctgaggagtgtccgtgcttcata 14465006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 256 - 305
Target Start/End: Complemental strand, 22440608 - 22440559
Alignment:
Q  256 acgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcat 305  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  22440608 acgtgtccgacactaggacacgcctaatccgaggagtgtccgtgcttcat 22440559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 257 - 308
Target Start/End: Original strand, 24343582 - 24343633
Alignment:
Q  257 cgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcataga 308  Q
    |||||||||||| |||||||||||| || |||||||||||||||||||||||    
T  24343582 cgtgtccgacaccgggacacgcctattctgaggagtgtccgtgcttcataga 24343633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 253 - 307
Target Start/End: Complemental strand, 3064922 - 3064868
Alignment:
Q  253 gacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    ||||| |||||||| ||| ||||||||||||| ||||||||||||||||||||||    
T  3064922 gacacatgtccgactctgagacacgcctaatccgaggagtgtccgtgcttcatag 3064868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 8423728 - 8423658
Alignment:
Q  242 tgtcggtgtcggacacg-----tgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    |||||||||||||||||     |||||||||| ||||||||||||||||||| ||||||||||| ||||||    
T  8423728 tgtcggtgtcggacacgacagctgtccgacaccgggacacgcctaatcggagaagtgtccgtgcgtcatag 8423658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 206 - 303
Target Start/End: Complemental strand, 27706212 - 27706110
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcgga-----cacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgc 300  Q
    |||||||||||||||||||||||||||| | ||||||||   |||||||     ||||| ||||| || ||||||||||||||| ||||| ||| |||||    
T  27706212 tcacataatttagtgtaattacaagtgtgagtgtcgtgttaatgtcggacacgacacgtatccgataccgggacacgcctaatctgaggaatgtacgtgc 27706113  T
Q  301 ttc 303  Q
    |||    
T  27706112 ttc 27706110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 261 - 307
Target Start/End: Complemental strand, 28964234 - 28964188
Alignment:
Q  261 tccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||    
T  28964234 tccgacactgggacacgcctaatccgaggagtgtccatgcttcatag 28964188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 258 - 307
Target Start/End: Complemental strand, 18513224 - 18513175
Alignment:
Q  258 gtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    |||||||||||  |||||||||||||| ||||||||||||||||||||||    
T  18513224 gtgtccgacaccaggacacgcctaatctgaggagtgtccgtgcttcatag 18513175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 210 - 302
Target Start/End: Original strand, 30838238 - 30838335
Alignment:
Q  210 ataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggac-----acgtgtccgacactgggacacgcctaatcggaggagtgtccgtgctt 302  Q
    ||||||||||||||||| |||| ||  ||||||||| |||||||||     |||||||||||||   ||||||||||| | |||||||||||||||||    
T  30838238 ataatttagtgtaattataagtatcggtgtcgtgtcagtgtcggacgcgacacgtgtccgacaccaagacacgcctaacccgaggagtgtccgtgctt 30838335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 246 - 302
Target Start/End: Complemental strand, 3712514 - 3712458
Alignment:
Q  246 ggtgtcggacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgctt 302  Q
    ||||||| | ||||||||||||| |||||||| |||||| |||||||||||||||||    
T  3712514 ggtgtcgtagacgtgtccgacaccgggacacggctaatctgaggagtgtccgtgctt 3712458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 259 - 307
Target Start/End: Complemental strand, 11596345 - 11596297
Alignment:
Q  259 tgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    |||||||||  ||||||||||||||| ||||||||||||||||||||||    
T  11596345 tgtccgacatcgggacacgcctaatctgaggagtgtccgtgcttcatag 11596297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 259 - 307
Target Start/End: Original strand, 16184902 - 16184950
Alignment:
Q  259 tgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    |||||||||||||||||||||||||| |||||||||  |||||||||||    
T  16184902 tgtccgacactgggacacgcctaatccgaggagtgtttgtgcttcatag 16184950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 238 - 307
Target Start/End: Complemental strand, 53381605 - 53381530
Alignment:
Q  238 gtcgtgtcggtgtcggacac------gtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    ||||||||||||||||||||      || |||||||| ||||||| ||||||| ||||||||||||||||||||||    
T  53381605 gtcgtgtcggtgtcggacactgacgcgtatccgacaccgggacacacctaatccgaggagtgtccgtgcttcatag 53381530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 259 - 306
Target Start/End: Complemental strand, 5922579 - 5922532
Alignment:
Q  259 tgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcata 306  Q
    |||||||||||||||||||||||||| ||||||||||  |||||||||    
T  5922579 tgtccgacactgggacacgcctaatctgaggagtgtctctgcttcata 5922532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 241 - 307
Target Start/End: Original strand, 16073442 - 16073513
Alignment:
Q  241 gtgtcggtgtcggacacg-----tgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    ||||||||||||||||||     |||||||||||  ||||||||||||| ||||||||||| ||||||||||    
T  16073442 gtgtcggtgtcggacacgatacatgtccgacactaagacacgcctaatccgaggagtgtccatgcttcatag 16073513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 253 - 308
Target Start/End: Complemental strand, 34306798 - 34306743
Alignment:
Q  253 gacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcataga 308  Q
    |||||||||||||||| | ||||||||||||| ||||| ||| |||||||||||||    
T  34306798 gacacgtgtccgacaccgagacacgcctaatctgaggaatgttcgtgcttcataga 34306743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 253 - 308
Target Start/End: Original strand, 36635395 - 36635450
Alignment:
Q  253 gacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcataga 308  Q
    |||||| ||| ||||| ||||||||||||||| || ||||||||||||||||||||    
T  36635395 gacacgcgtcagacaccgggacacgcctaatccgaagagtgtccgtgcttcataga 36635450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 254 - 308
Target Start/End: Original strand, 18966575 - 18966629
Alignment:
Q  254 acacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcataga 308  Q
    ||||||||||||||  |||| ||||||||||  ||||||||||||||||||||||    
T  18966575 acacgtgtccgacaacgggatacgcctaatctaaggagtgtccgtgcttcataga 18966629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 206 - 307
Target Start/End: Complemental strand, 24613736 - 24613630
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacacg-----tgtccgacactgggacacgcctaatcggaggagtgtccgtgc 300  Q
    |||||||||| | ||||| ||||||||||  |||| |||||||||| ||||||     |||| |||||  ||||||| ||||||  ||||||||||||||    
T  24613736 tcacataattcaatgtaagtacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtctgacaccaggacacgtctaatcctaggagtgtccgtgc 24613637  T
Q  301 ttcatag 307  Q
    |||||||    
T  24613636 ttcatag 24613630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 208 - 258
Target Start/End: Original strand, 51701284 - 51701334
Alignment:
Q  208 acataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacacg 258  Q
    |||||||| ||||||||||||||||| | |||||||||||||||| |||||    
T  51701284 acataattgagtgtaattacaagtgttagtgtcgtgtcggtgtcgaacacg 51701334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 270 - 307
Target Start/End: Complemental strand, 5775341 - 5775304
Alignment:
Q  270 gggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  5775341 gggacacgcctaatccgaggagtgtccgtgcttcatag 5775304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 241 - 312
Target Start/End: Complemental strand, 12895285 - 12895209
Alignment:
Q  241 gtgtcggtgtcggacacg-----tgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatagaatat 312  Q
    ||||||||||||||||||     | |||||||  ||||||||||||||| ||||||||| |||||||||||| ||||    
T  12895285 gtgtcggtgtcggacacgacatgtatccgacatcgggacacgcctaatccgaggagtgttcgtgcttcatagcatat 12895209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 206 - 305
Target Start/End: Original strand, 19312359 - 19312463
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcgga-----cacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgc 300  Q
    |||||| ||| |||||||||| |||| ||  |||||||||| |||||||     |||||||||||||| | |||||| |||||| ||| ||||||||||     
T  19312359 tcacatgattcagtgtaattataagtatcggtgtcgtgtcgttgtcggatacgacacgtgtccgacaccgagacacgtctaatctgagaagtgtccgtgt 19312458  T
Q  301 ttcat 305  Q
    |||||    
T  19312459 ttcat 19312463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 270 - 310
Target Start/End: Original strand, 28470447 - 28470487
Alignment:
Q  270 gggacacgcctaatcggaggagtgtccgtgcttcatagaat 310  Q
    |||||| |||||||| |||||||||||||||||||||||||    
T  28470447 gggacatgcctaatccgaggagtgtccgtgcttcatagaat 28470487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 260 - 308
Target Start/End: Original strand, 37203324 - 37203372
Alignment:
Q  260 gtccgacactgggacacgcctaatcggaggagtgtccgtgcttcataga 308  Q
    ||||||||| |||||||| |||||| ||| |||||||||||||||||||    
T  37203324 gtccgacaccgggacacgtctaatccgagaagtgtccgtgcttcataga 37203372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 242 - 305
Target Start/End: Complemental strand, 482248 - 482185
Alignment:
Q  242 tgtcggtgtcggacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcat 305  Q
    ||||||||||||||||||||| |||||  | ||||| |||||| || |||||||| ||||||||    
T  482248 tgtcggtgtcggacacgtgtctgacacctgaacacgtctaatccgatgagtgtccatgcttcat 482185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 264 - 307
Target Start/End: Original strand, 40784029 - 40784072
Alignment:
Q  264 gacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    ||||| ||||||| ||||||| ||||||||||||||||||||||    
T  40784029 gacaccgggacacacctaatccgaggagtgtccgtgcttcatag 40784072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 253 - 308
Target Start/End: Original strand, 49431091 - 49431146
Alignment:
Q  253 gacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcataga 308  Q
    ||||||||||| |||| ||||||||||| ||| ||||||||||| ||||| |||||    
T  49431091 gacacgtgtccaacaccgggacacgccttatccgaggagtgtccatgctttataga 49431146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 253 - 307
Target Start/End: Complemental strand, 5414155 - 5414101
Alignment:
Q  253 gacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    |||||||||| ||||| ||||||| ||| |||  |||||||||||||||||||||    
T  5414155 gacacgtgtctgacacagggacacaccttatccaaggagtgtccgtgcttcatag 5414101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 253 - 307
Target Start/End: Complemental strand, 12884401 - 12884347
Alignment:
Q  253 gacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    ||||||||| |||||  ||| |||| |||||| ||||||||||||||||||||||    
T  12884401 gacacgtgttcgacatcggggcacgtctaatccgaggagtgtccgtgcttcatag 12884347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 206 - 307
Target Start/End: Complemental strand, 22234925 - 22234819
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtc-----ggacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgc 300  Q
    |||||||||| |||||||||  | |||||  |||||||||||||||      ||||||||||||||||  ||||||  |||||| ||| ||||| |||||    
T  22234925 tcacataattcagtgtaattctatgtgtcggtgtcgtgtcggtgtctgacacgacacgtgtccgacaccaggacacagctaatccgagaagtgttcgtgc 22234826  T
Q  301 ttcatag 307  Q
    |||||||    
T  22234825 ttcatag 22234819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 257 - 307
Target Start/End: Original strand, 23386228 - 23386277
Alignment:
Q  257 cgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    |||||||||||  |||||| |||||||| ||||||||||||||||||||||    
T  23386228 cgtgtccgacaa-gggacatgcctaatcagaggagtgtccgtgcttcatag 23386277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 253 - 307
Target Start/End: Original strand, 35161101 - 35161155
Alignment:
Q  253 gacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    |||||||||||||||| || |||| ||||||| ||  ||||||||||||||||||    
T  35161101 gacacgtgtccgacaccggaacacacctaatccgaaaagtgtccgtgcttcatag 35161155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 210 - 268
Target Start/End: Original strand, 40742619 - 40742677
Alignment:
Q  210 ataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacacgtgtccgacac 268  Q
    ||||| ||||||||||| | |||||  ||||||||||||||| |||||||| |||||||    
T  40742619 ataatctagtgtaattatatgtgtcgatgtcgtgtcggtgtcagacacgtgaccgacac 40742677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 218 - 308
Target Start/End: Original strand, 50280919 - 50281008
Alignment:
Q  218 gtgtaattacaagtgtcactgtcgtgtcggtgtcggacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcataga 308  Q
    ||||||||||||||| |  |||||||||| ||||||||||||||| ||||| |||||| |  |||||  |  || ||||||||||||||||    
T  50280919 gtgtaattacaagtgccggtgtcgtgtcg-tgtcggacacgtgtctgacaccgggacatgtttaatcctaatagcgtccgtgcttcataga 50281008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 258 - 307
Target Start/End: Original strand, 30094083 - 30094132
Alignment:
Q  258 gtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    ||||| ||||| ||||||||||||||| || ||||||||||||| |||||    
T  30094083 gtgtcggacaccgggacacgcctaatccgaagagtgtccgtgctacatag 30094132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 270 - 307
Target Start/End: Original strand, 30299011 - 30299048
Alignment:
Q  270 gggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    |||||||| |||||| ||||||||||||||||||||||    
T  30299011 gggacacgtctaatccgaggagtgtccgtgcttcatag 30299048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 270 - 307
Target Start/End: Original strand, 30327879 - 30327916
Alignment:
Q  270 gggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    |||||||| |||||| ||||||||||||||||||||||    
T  30327879 gggacacgtctaatccgaggagtgtccgtgcttcatag 30327916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 221 - 258
Target Start/End: Complemental strand, 53490784 - 53490747
Alignment:
Q  221 taattacaagtgtcactgtcgtgtcggtgtcggacacg 258  Q
    ||||||||||||||| | ||||||||||||||||||||    
T  53490784 taattacaagtgtcagtatcgtgtcggtgtcggacacg 53490747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 60; Significance: 3e-25; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 206 - 308
Target Start/End: Original strand, 24339666 - 24339773
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacacg-----tgtccgacactgggacacgcctaatcggaggagtgtccgtgc 300  Q
    |||||||||| ||||||||||||||||||  ||||||||||||||||||||||     | |||||||| ||||||||||||||| |||||||| ||||||    
T  24339666 tcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacgacacgtatccgacaccgggacacgcctaatccgaggagtgcccgtgc 24339765  T
Q  301 ttcataga 308  Q
    ||||||||    
T  24339766 ttcataga 24339773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 206 - 307
Target Start/End: Complemental strand, 5409871 - 5409771
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcat 305  Q
    |||||||||| |||| |||||||||||||  |||||||||||   || ||||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  5409871 tcacataattcagtgcaattacaagtgtcggtgtcgtgtcggacacg-acacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcat 5409773  T
Q  306 ag 307  Q
    ||    
T  5409772 ag 5409771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 206 - 307
Target Start/End: Original strand, 2334274 - 2334379
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacacg-----tgtccgacactgggacacgcctaatcggaggagtgtccgtgc 300  Q
    |||||||||||||||||||||||||||||  ||||||||| ||||||||||||     ||||||||||||  ||||| |||||| ||||||||||||||     
T  2334274 tcacataatttagtgtaattacaagtgtcggtgtcgtgtc-gtgtcggacacgacacatgtccgacactgaaacacgtctaatccgaggagtgtccgtgt 2334372  T
Q  301 ttcatag 307  Q
    |||||||    
T  2334373 ttcatag 2334379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 206 - 307
Target Start/End: Original strand, 9778524 - 9778624
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcat 305  Q
    |||||||||| ||| ||||||||||||||  |||||||||||   |  ||||||||||||||| |||||||||||||||  |||||||||||||||||||    
T  9778524 tcacataattcagtataattacaagtgtcggtgtcgtgtcggacaca-acacgtgtccgacaccgggacacgcctaatccaaggagtgtccgtgcttcat 9778622  T
Q  306 ag 307  Q
    ||    
T  9778623 ag 9778624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 206 - 307
Target Start/End: Complemental strand, 32094055 - 32093954
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacacgtgtccgacactggg-acacgcctaatcggaggagtgtccgtgcttca 304  Q
    |||||||||| ||||||||||||| ||||  |||||||||||   || ||||||||||||||| ||| |||||||||||| ||||||||| |||||||||    
T  32094055 tcacataattcagtgtaattacaaatgtcggtgtcgtgtcggacacg-acacgtgtccgacaccggggacacgcctaatccgaggagtgttcgtgcttca 32093957  T
Q  305 tag 307  Q
    |||    
T  32093956 tag 32093954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 206 - 307
Target Start/End: Complemental strand, 43027504 - 43027404
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcat 305  Q
    |||||||||  ||||||| ||||||||||  ||||||||| |   || ||||||||||||||| ||||||||||||||| || |||||||||||||||||    
T  43027504 tcacataatgcagtgtaaatacaagtgtcggtgtcgtgtcagacacg-acacgtgtccgacaccgggacacgcctaatccgatgagtgtccgtgcttcat 43027406  T
Q  306 ag 307  Q
    ||    
T  43027405 ag 43027404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 253 - 307
Target Start/End: Original strand, 598273 - 598327
Alignment:
Q  253 gacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    |||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||    
T  598273 gacacgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttcatag 598327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 208 - 302
Target Start/End: Original strand, 13770717 - 13770810
Alignment:
Q  208 acataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgctt 302  Q
    |||||||| ||||||||||||||||||  |||||||||||   |  ||||||||||||||| || |||||||||||| || ||||||||||||||    
T  13770717 acataattcagtgtaattacaagtgtcgttgtcgtgtcggacaca-acacgtgtccgacaccggaacacgcctaatccgaagagtgtccgtgctt 13770810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 241 - 303
Target Start/End: Complemental strand, 40287368 - 40287306
Alignment:
Q  241 gtgtcggtgtcggacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttc 303  Q
    |||||||| |||||||| |||||||||| |||||| |||||||| ||||||||||||||||||    
T  40287368 gtgtcggtatcggacacatgtccgacaccgggacatgcctaatccgaggagtgtccgtgcttc 40287306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 206 - 305
Target Start/End: Complemental strand, 26033496 - 26033392
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtc-----ggacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgc 300  Q
    |||||||||| ||||||||||||||||||  | |||||||||||||      ||||||||||||| || | ||||| ||||||| ||||||||||||||     
T  26033496 tcacataattcagtgtaattacaagtgtcggtctcgtgtcggtgtcagacatgacacgtgtccgataccgcgacacacctaatccgaggagtgtccgtgt 26033397  T
Q  301 ttcat 305  Q
    |||||    
T  26033396 ttcat 26033392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 241 - 305
Target Start/End: Complemental strand, 29999038 - 29998974
Alignment:
Q  241 gtgtcggtgtcggacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcat 305  Q
    ||||||||||||||||||||||||||||    ||||| |||||||||||||||||| ||||||||    
T  29999038 gtgtcggtgtcggacacgtgtccgacacctaaacacgtctaatcggaggagtgtccatgcttcat 29998974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 257 - 307
Target Start/End: Complemental strand, 7133262 - 7133212
Alignment:
Q  257 cgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    |||||||||||||||||||| ||||||| |||||| |||||||||||||||    
T  7133262 cgtgtccgacactgggacacacctaatctgaggagcgtccgtgcttcatag 7133212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 206 - 307
Target Start/End: Original strand, 7438730 - 7438836
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacacg-----tgtccgacactgggacacgcctaatcggaggagtgtccgtgc 300  Q
    |||||||||| | ||||||||||||||||  |||| ||||||||||  |||||     ||| ||||||| |||||||||||||   ||||||||||||||    
T  7438730 tcacataattcaatgtaattacaagtgtcggtgtcatgtcggtgtcaaacacgacacatgtgcgacactaggacacgcctaattcaaggagtgtccgtgc 7438829  T
Q  301 ttcatag 307  Q
    |||||||    
T  7438830 ttcatag 7438836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 253 - 307
Target Start/End: Complemental strand, 29763183 - 29763129
Alignment:
Q  253 gacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    |||||||||||||||   |||||||||||||| ||||||||||||||||||||||    
T  29763183 gacacgtgtccgacatcaggacacgcctaatccgaggagtgtccgtgcttcatag 29763129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 258 - 307
Target Start/End: Original strand, 6490786 - 6490835
Alignment:
Q  258 gtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    ||||||||||| ||||||||| ||||| ||||||||||||||||||||||    
T  6490786 gtgtccgacaccgggacacgcttaatccgaggagtgtccgtgcttcatag 6490835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 253 - 306
Target Start/End: Complemental strand, 32287457 - 32287404
Alignment:
Q  253 gacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcata 306  Q
    |||| ||||||||||| ||||||| ||||||| |||||||||||||||||||||    
T  32287457 gacaagtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 32287404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 206 - 258
Target Start/End: Complemental strand, 9408369 - 9408317
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacacg 258  Q
    |||||||||||||||||||||||||||||  |||||| |||||||| ||||||    
T  9408369 tcacataatttagtgtaattacaagtgtcggtgtcgtatcggtgtcagacacg 9408317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 210 - 258
Target Start/End: Complemental strand, 11272617 - 11272569
Alignment:
Q  210 ataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacacg 258  Q
    |||||| ||||||||||||||||||  ||||||||||||||||||||||    
T  11272617 ataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacg 11272569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 255 - 307
Target Start/End: Original strand, 14729770 - 14729822
Alignment:
Q  255 cacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    |||||||||||||| ||||||||| ||||| ||||||||||||| ||||||||    
T  14729770 cacgtgtccgacaccgggacacgcttaatccgaggagtgtccgtacttcatag 14729822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 241 - 308
Target Start/End: Original strand, 21880200 - 21880272
Alignment:
Q  241 gtgtcggtgtcggacacg-----tgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcataga 308  Q
    ||||||||||||||||||     ||||||||||  |||||||||||||| ||| |||||||||||||||||||    
T  21880200 gtgtcggtgtcggacacgacacatgtccgacaccaggacacgcctaatccgagaagtgtccgtgcttcataga 21880272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 257 - 300
Target Start/End: Complemental strand, 18215187 - 18215144
Alignment:
Q  257 cgtgtccgacactgggacacgcctaatcggaggagtgtccgtgc 300  Q
    |||||||||||| ||||||||||||||| |||||||||||||||    
T  18215187 cgtgtccgacaccgggacacgcctaatctgaggagtgtccgtgc 18215144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 253 - 307
Target Start/End: Original strand, 1433524 - 1433578
Alignment:
Q  253 gacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    |||| |||||||||||  ||||||| |||||| ||||||||||||||||||||||    
T  1433524 gacatgtgtccgacaccaggacacgtctaatccgaggagtgtccgtgcttcatag 1433578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 253 - 307
Target Start/End: Original strand, 15680874 - 15680928
Alignment:
Q  253 gacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    |||||||||||||||| | |||||| |||||  ||||||||||||||||||||||    
T  15680874 gacacgtgtccgacaccgagacacgtctaattcgaggagtgtccgtgcttcatag 15680928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 253 - 307
Target Start/End: Original strand, 17852065 - 17852119
Alignment:
Q  253 gacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    |||||||||||||||| | ||||| ||||||  ||||||||||||||||||||||    
T  17852065 gacacgtgtccgacaccgagacacacctaattcgaggagtgtccgtgcttcatag 17852119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 253 - 307
Target Start/End: Original strand, 21864873 - 21864927
Alignment:
Q  253 gacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    |||||||||||||||| |||||||| |||||  |||||||||| |||||||||||    
T  21864873 gacacgtgtccgacaccgggacacgtctaattcgaggagtgtctgtgcttcatag 21864927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 257 - 307
Target Start/End: Complemental strand, 40131989 - 40131939
Alignment:
Q  257 cgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    |||||||||||| |||||||| |||||| |||||||||| |||||||||||    
T  40131989 cgtgtccgacacagggacacgtctaatccgaggagtgtctgtgcttcatag 40131939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 206 - 306
Target Start/End: Original strand, 32308144 - 32308249
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacacg-----tgtccgacactgggacacgcctaatcggaggagtgtccgtgc 300  Q
    |||||||||| |||||||||  | |||||| |||||||||||||| |||||||     |||||||||| | |||||  |||||| ||||||||| | |||    
T  32308144 tcacataattcagtgtaattgtatgtgtcagtgtcgtgtcggtgttggacacgacacatgtccgacaccgagacacagctaatccgaggagtgttcatgc 32308243  T
Q  301 ttcata 306  Q
    ||||||    
T  32308244 ttcata 32308249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 267 - 307
Target Start/End: Original strand, 3991392 - 3991432
Alignment:
Q  267 actgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    |||||||||||||||||| |||||||||||| |||||||||    
T  3991392 actgggacacgcctaatccgaggagtgtccgggcttcatag 3991432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 206 - 250
Target Start/End: Original strand, 18039023 - 18039067
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgt 250  Q
    |||||||||| ||||||||||||||||||  ||||||||||||||    
T  18039023 tcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgt 18039067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 254 - 306
Target Start/End: Original strand, 20549857 - 20549909
Alignment:
Q  254 acacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcata 306  Q
    |||| ||||||||| || ||||||||||||| |||||||| ||||||||||||    
T  20549857 acacatgtccgacaatgagacacgcctaatccgaggagtgcccgtgcttcata 20549909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 212 - 307
Target Start/End: Original strand, 25822685 - 25822785
Alignment:
Q  212 aatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacacg-----tgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcata 306  Q
    |||| ||||||||||||||||||  |||||| ||||| |||||||||     |||| ||||  |||||| ||||||||  ||||||||||||| ||||||    
T  25822685 aattcagtgtaattacaagtgtcggtgtcgtatcggtatcggacacgacacgtgtctgacatcgggacatgcctaatctaaggagtgtccgtgtttcata 25822784  T
Q  307 g 307  Q
    |    
T  25822785 g 25822785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 271 - 307
Target Start/End: Original strand, 35862034 - 35862070
Alignment:
Q  271 ggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    |||||||||||||| ||||||||||||||||||||||    
T  35862034 ggacacgcctaatccgaggagtgtccgtgcttcatag 35862070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 256 - 307
Target Start/End: Complemental strand, 11738202 - 11738151
Alignment:
Q  256 acgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    |||||| | |||||| ||||||||||||| |||||||||||||| |||||||    
T  11738202 acgtgttccacactgagacacgcctaatcagaggagtgtccgtgtttcatag 11738151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 206 - 303
Target Start/End: Complemental strand, 27229346 - 27229244
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggac-----acgtgtccgacactgggacacgcctaatcggaggagtgtccgtgc 300  Q
    ||||||||||||||||||||| |||| ||  |||||||||  |||| |||     |||||| ||||||| |||||||||||||  ||||| ||||| |||    
T  27229346 tcacataatttagtgtaattataagtatcggtgtcgtgtcactgtcagacacgatacgtgttcgacactaggacacgcctaattcgaggaatgtccatgc 27229247  T
Q  301 ttc 303  Q
    |||    
T  27229246 ttc 27229244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 241 - 307
Target Start/End: Complemental strand, 29812658 - 29812598
Alignment:
Q  241 gtgtcggtgtcggacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    |||||||||||||||||     |||||| ||||||||||||||| ||| ||||||||||||||||||    
T  29812658 gtgtcggtgtcggacac-----cgacac-gggacacgcctaatccgagaagtgtccgtgcttcatag 29812598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 257 - 307
Target Start/End: Original strand, 30813866 - 30813916
Alignment:
Q  257 cgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    |||||||||||   | |||||||||||| ||||||||||||||||||||||    
T  30813866 cgtgtccgacatcagaacacgcctaatccgaggagtgtccgtgcttcatag 30813916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 257 - 307
Target Start/End: Complemental strand, 41229287 - 41229237
Alignment:
Q  257 cgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    |||||||| ||||| ||||||||||||  ||| ||||||||||||||||||    
T  41229287 cgtgtccgtcactgcgacacgcctaatatgagaagtgtccgtgcttcatag 41229237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 263 - 308
Target Start/End: Original strand, 5307331 - 5307376
Alignment:
Q  263 cgacactgggacacgcctaatcggaggagtgtccgtgcttcataga 308  Q
    ||||||| ||||||||||||||  |||||||| |||||||||||||    
T  5307331 cgacactaggacacgcctaatccaaggagtgtacgtgcttcataga 5307376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 284
Target Start/End: Original strand, 6028651 - 6028732
Alignment:
Q  208 acataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcg-----gacacgtgtccgacactgggacacgcctaatc 284  Q
    |||||||||| ||||||||||| ||||  ||||||||| ||||||     |||||| || |||||||| |||||||||||||    
T  6028651 acataatttaatgtaattacaaatgtcggtgtcgtgtcagtgtcgaacacgacacgagttcgacactgagacacgcctaatc 6028732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 263 - 304
Target Start/End: Complemental strand, 8842323 - 8842282
Alignment:
Q  263 cgacactgggacacgcctaatcggaggagtgtccgtgcttca 304  Q
    |||||| |||||||||||||||  ||||||||||||||||||    
T  8842323 cgacaccgggacacgcctaatccaaggagtgtccgtgcttca 8842282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 306
Target Start/End: Complemental strand, 11665475 - 11665370
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcg-----gacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgc 300  Q
    |||||||||| ||| |||||| |||||||  |||| |||||||||||     |||||||||||||||| |  ||||  |||||  ||||| |||||||||    
T  11665475 tcacataattcagtctaattataagtgtcgatgtcatgtcggtgtcgaacacgacacgtgtccgacaccgaaacacatctaatacgaggaatgtccgtgc 11665376  T
Q  301 ttcata 306  Q
    ||||||    
T  11665375 ttcata 11665370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 251
Target Start/End: Original strand, 21560527 - 21560572
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtc 251  Q
    |||||||||| ||||||||||||||||||  |||||| ||||||||    
T  21560527 tcacataattcagtgtaattacaagtgtcggtgtcgtatcggtgtc 21560572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 258 - 307
Target Start/End: Original strand, 24105748 - 24105797
Alignment:
Q  258 gtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    ||||||||||| ||||||||||||| | |||||||||  |||||||||||    
T  24105748 gtgtccgacaccgggacacgcctaacccgaggagtgtttgtgcttcatag 24105797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 270 - 307
Target Start/End: Complemental strand, 28973918 - 28973881
Alignment:
Q  270 gggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    ||||||||||||||| |||| |||||||||||||||||    
T  28973918 gggacacgcctaatccgaggtgtgtccgtgcttcatag 28973881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 258 - 307
Target Start/End: Original strand, 35749957 - 35750006
Alignment:
Q  258 gtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    |||||||| || ||||||| |||| ||||||||||||| |||||||||||    
T  35749957 gtgtccgaaaccgggacacacctagtcggaggagtgtctgtgcttcatag 35750006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 257 - 302
Target Start/End: Original strand, 43250073 - 43250118
Alignment:
Q  257 cgtgtccgacactgggacacgcctaatcggaggagtgtccgtgctt 302  Q
    ||||||||||||  |||||||||||||  |||||||||||||||||    
T  43250073 cgtgtccgacaccaggacacgcctaattcgaggagtgtccgtgctt 43250118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 59; Significance: 1e-24; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 206 - 307
Target Start/End: Original strand, 37419767 - 37419873
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacacg-----tgtccgacactgggacacgcctaatcggaggagtgtccgtgc 300  Q
    ||||| |||| |||||||||||||||| |  ||||||||||||||||||||||     |||||||||| ||||||||||||||| |||||||||||||||    
T  37419767 tcacaaaattcagtgtaattacaagtgccggtgtcgtgtcggtgtcggacacgatgcgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgc 37419866  T
Q  301 ttcatag 307  Q
    |||||||    
T  37419867 ttcatag 37419873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 208 - 310
Target Start/End: Complemental strand, 11223896 - 11223790
Alignment:
Q  208 acataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacacg----tgtccgacactgggacacgcctaatcggaggagtgtccgtgcttc 303  Q
    |||||||| ||||||||||||||||||  |||| ||| |||||||||||||    |||| ||||| ||||||||||||||| ||||||||||||||||||    
T  11223896 acataattcagtgtaattacaagtgtcggtgtcatgtaggtgtcggacacgacactgtctgacaccgggacacgcctaatctgaggagtgtccgtgcttc 11223797  T
Q  304 atagaat 310  Q
    |||||||    
T  11223796 atagaat 11223790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 218 - 308
Target Start/End: Original strand, 26769547 - 26769642
Alignment:
Q  218 gtgtaattacaagtgtcactgtcgtgtcggtgtcggaca-----cgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcataga 308  Q
    |||||||||||||||||  |||| ||||||| |||||||     |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  26769547 gtgtaattacaagtgtcggtgtcatgtcggtatcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtgtccgtgcttcataga 26769642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 206 - 307
Target Start/End: Complemental strand, 30717565 - 30717459
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacacg-----tgtccgacactgggacacgcctaatcggaggagtgtccgtgc 300  Q
    |||||||||| ||||||||||||||||||  |||||||||| |||||||||||     ||| ||||||||||| ||||||||||  ||||||||||||||    
T  30717565 tcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacgtgttcgacactgggatacgcctaatccaaggagtgtccgtgc 30717466  T
Q  301 ttcatag 307  Q
    |||||||    
T  30717465 ttcatag 30717459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 206 - 308
Target Start/End: Complemental strand, 32749860 - 32749753
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggac-----acgtgtccgacactgggacacgcctaatcggaggagtgtccgtgc 300  Q
    |||||||||| |||||||| | |||||||| |||||||||| ||||||||     | ||||||||||||||||||||||| |||  ||||||||||| ||    
T  32749860 tcacataattcagtgtaataataagtgtcagtgtcgtgtcgatgtcggacgtgacatgtgtccgacactgggacacgccttatctaaggagtgtccgcgc 32749761  T
Q  301 ttcataga 308  Q
    ||||||||    
T  32749760 ttcataga 32749753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 210 - 307
Target Start/End: Original strand, 35056896 - 35056998
Alignment:
Q  210 ataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggaca-----cgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttca 304  Q
    |||||| |||||||||| | |||||  ||||||||||||||||||||     |||||||||||| |  |||||||||||| |||||||||||||||||||    
T  35056896 ataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgacacgtgtccgacacggaaacacgcctaatctgaggagtgtccgtgcttca 35056995  T
Q  305 tag 307  Q
    |||    
T  35056996 tag 35056998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 240 - 308
Target Start/End: Original strand, 28412409 - 28412477
Alignment:
Q  240 cgtgtcggtgtcggacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcataga 308  Q
    ||||| |||||||||||||||||||||||||||||||| |||||  |||||| ||| ||||||||||||    
T  28412409 cgtgttggtgtcggacacgtgtccgacactgggacacggctaattcgaggagcgtcagtgcttcataga 28412477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 206 - 308
Target Start/End: Complemental strand, 34785017 - 34784910
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacacg-----tgtccgacactgggacacgcctaatcggaggagtgtccgtgc 300  Q
    ||||||||||||||||||||| | |||||  |||||||||||| |||||||||     |||| ||||| ||||||||||| ||  |||||||||| ||||    
T  34785017 tcacataatttagtgtaattatatgtgtcggtgtcgtgtcggtatcggacacgacacctgtctgacacggggacacgccttattcgaggagtgtctgtgc 34784918  T
Q  301 ttcataga 308  Q
    ||||||||    
T  34784917 ttcataga 34784910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 241 - 305
Target Start/End: Complemental strand, 2438730 - 2438661
Alignment:
Q  241 gtgtcggtgtcggacacg-----tgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcat 305  Q
    ||||||||||||||||||     |||||||||| ||||||||||||||| ||||||||||||||||||||    
T  2438730 gtgtcggtgtcggacacgacacatgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcat 2438661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 253 - 306
Target Start/End: Original strand, 28596534 - 28596587
Alignment:
Q  253 gacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcata 306  Q
    ||||||||||||||||| |||||| ||||||| |||||||||||||||||||||    
T  28596534 gacacgtgtccgacactcggacactcctaatccgaggagtgtccgtgcttcata 28596587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 142 - 309
Target Start/End: Original strand, 37558939 - 37559098
Alignment:
Q  142 ctatgaagcactgatactgacagggcacactgatacaccgacacatctaataatttgnnnnnnntcacataatttagtgtaattacaagtgtcactgtcg 241  Q
    ||||||||||| ||||| |||| || ||||||| || |||||||| |||||||||||       |||||||||| | ||||||||||||||||      |    
T  37558939 ctatgaagcacggatacggacacgg-acactgacacgccgacacagctaataatttgtaaaaa-tcacataattcaatgtaattacaagtgtcg-----g 37559031  T
Q  242 tgtcggtgtcggacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatagaa 309  Q
    ||||||  | | ||||||||||||||| || |||||| ||||| ||||||||||||||||||||||||    
T  37559032 tgtcggacttg-acacgtgtccgacaccggtacacgcttaatccgaggagtgtccgtgcttcatagaa 37559098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 254 - 307
Target Start/End: Complemental strand, 38117152 - 38117099
Alignment:
Q  254 acacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    ||||||||||||||| ||||||||||||||| |||| |||||||||||||||||    
T  38117152 acacgtgtccgacaccgggacacgcctaatccgaggggtgtccgtgcttcatag 38117099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 254 - 307
Target Start/End: Complemental strand, 42511375 - 42511322
Alignment:
Q  254 acacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    ||||||||||||||| |||||||| |||||| ||||||||||||||||||||||    
T  42511375 acacgtgtccgacacagggacacggctaatccgaggagtgtccgtgcttcatag 42511322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 206 - 305
Target Start/End: Original strand, 15657888 - 15657992
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggac-----acgtgtccgacactgggacacgcctaatcggaggagtgtccgtgc 300  Q
    |||||||||| ||||||||||||| ||||  |||||||| | ||||||||     ||||||||||| | |||||||||||| || ||||||||||| |||    
T  15657888 tcacataattcagtgtaattacaaatgtcggtgtcgtgttgatgtcggacgcgacacgtgtccgacgccgggacacgcctagtccgaggagtgtccatgc 15657987  T
Q  301 ttcat 305  Q
    |||||    
T  15657988 ttcat 15657992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 241 - 300
Target Start/End: Original strand, 21624315 - 21624374
Alignment:
Q  241 gtgtcggtgtcggacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgc 300  Q
    |||||||||||||||||||||||||||  ||||||| |||||||  ||||||||||||||    
T  21624315 gtgtcggtgtcggacacgtgtccgacagcgggacacacctaatccaaggagtgtccgtgc 21624374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 206 - 302
Target Start/End: Complemental strand, 23058477 - 23058389
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgctt 302  Q
    |||||||||  ||||||||||||||||||  ||||||||||||||        |||||||||| ||||||||||||||| ||| |||||||||||||    
T  23058477 tcacataatccagtgtaattacaagtgtcggtgtcgtgtcggtgt--------tgtccgacaccgggacacgcctaatccgagaagtgtccgtgctt 23058389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 253 - 307
Target Start/End: Complemental strand, 18841007 - 18840953
Alignment:
Q  253 gacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    ||||| |||||||||| ||||||| ||||||| ||||||||||||||||||||||    
T  18841007 gacacatgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcatag 18840953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 253 - 308
Target Start/End: Original strand, 24009360 - 24009415
Alignment:
Q  253 gacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcataga 308  Q
    |||||||||| ||||| ||||||||||| |||  ||||||||||||||||||||||    
T  24009360 gacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcataga 24009415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 264 - 306
Target Start/End: Complemental strand, 3444869 - 3444827
Alignment:
Q  264 gacactgggacacgcctaatcggaggagtgtccgtgcttcata 306  Q
    |||||||||||| |||||||| |||||||||||||||||||||    
T  3444869 gacactgggacatgcctaatccgaggagtgtccgtgcttcata 3444827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 253 - 307
Target Start/End: Complemental strand, 21782798 - 21782744
Alignment:
Q  253 gacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    ||||||||||| |||| |||||||| |||||| | ||||||||||||||||||||    
T  21782798 gacacgtgtccaacaccgggacacgtctaatctgtggagtgtccgtgcttcatag 21782744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 258 - 308
Target Start/End: Complemental strand, 24975304 - 24975254
Alignment:
Q  258 gtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcataga 308  Q
    ||||||||||||||||||   |||||| |||||||||||||||||||||||    
T  24975304 gtgtccgacactgggacaaatctaatctgaggagtgtccgtgcttcataga 24975254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 253 - 307
Target Start/End: Original strand, 27084334 - 27084388
Alignment:
Q  253 gacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    ||||||||||| |||| | ||||||||||||||||||||||||  ||||||||||    
T  27084334 gacacgtgtccaacaccgagacacgcctaatcggaggagtgtctctgcttcatag 27084388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 206 - 308
Target Start/End: Complemental strand, 29367379 - 29367282
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcat 305  Q
    |||||||||||||||||||||||| ||||  | ||||||||||     ||| ||||||||||| | |||| |||||||| ||||| |||  |||||||||    
T  29367379 tcacataatttagtgtaattacaaatgtcggtatcgtgtcggt-----acatgtgtccgacaccgagacatgcctaatccgaggaatgtttgtgcttcat 29367285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 253 - 307
Target Start/End: Complemental strand, 34993976 - 34993922
Alignment:
Q  253 gacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    |||| ||||||||||||||||||||||||||   |||||||| ||||||||||||    
T  34993976 gacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgcttcatag 34993922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 253 - 307
Target Start/End: Original strand, 41843511 - 41843565
Alignment:
Q  253 gacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    |||||||||||||||| ||||||||| | ||| |||||||||| |||||||||||    
T  41843511 gacacgtgtccgacacggggacacgctttatccgaggagtgtctgtgcttcatag 41843565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 206 - 307
Target Start/End: Original strand, 44635522 - 44635612
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcat 305  Q
    |||| ||||| ||||||||||||||||||      ||||||||||||||||||      |||| | ||||||||||||| ||||||||||||||||||||    
T  44635522 tcacgtaattcagtgtaattacaagtgtcg-----gtgtcggtgtcggacacg------acaccgagacacgcctaatctgaggagtgtccgtgcttcat 44635610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 209 - 306
Target Start/End: Original strand, 44860347 - 44860449
Alignment:
Q  209 cataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacacg-----tgtccgacactgggacacgcctaatcggaggagtgtccgtgcttc 303  Q
    ||||||| |||||||||| | |||||  |||||||| ||||| |||||||     |||||||||  ||||||| ||||||  ||||||||||||||||||    
T  44860347 cataattcagtgtaattatatgtgtcggtgtcgtgttggtgttggacacgacatgtgtccgacatcgggacacacctaattcgaggagtgtccgtgcttc 44860446  T
Q  304 ata 306  Q
    |||    
T  44860447 ata 44860449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 258 - 307
Target Start/End: Complemental strand, 18631400 - 18631351
Alignment:
Q  258 gtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    ||||| ||||||||||||||||||||  |||||||||||| |||||||||    
T  18631400 gtgtcagacactgggacacgcctaatgcgaggagtgtccgagcttcatag 18631351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 210 - 258
Target Start/End: Complemental strand, 4882727 - 4882679
Alignment:
Q  210 ataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacacg 258  Q
    |||||| ||||||||||||||||||  ||||||||||||||| ||||||    
T  4882727 ataattcagtgtaattacaagtgtcgatgtcgtgtcggtgtcagacacg 4882679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 207 - 310
Target Start/End: Original strand, 17776612 - 17776720
Alignment:
Q  207 cacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacacg-----tgtccgacactgggacacgcctaatcggaggagtgtccgtgct 301  Q
    ||||||| | |||||||||| | |||||| ||||  |||||||| |||||||     ||||||||   |||||| |||||||| ||||||||||||||||    
T  17776612 cacataagtcagtgtaattatatgtgtcagtgtcaagtcggtgttggacacgacgtgtgtccgacctcgggacaggcctaatccgaggagtgtccgtgct 17776711  T
Q  302 tcatagaat 310  Q
    ||| |||||    
T  17776712 tcacagaat 17776720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 242 - 305
Target Start/End: Original strand, 19942314 - 19942382
Alignment:
Q  242 tgtcggtgtcggacacg-----tgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcat 305  Q
    |||||||||||||||||     |||| ||||| ||||||||||||||| ||||||||||| ||||||||    
T  19942314 tgtcggtgtcggacacggcatgtgtctgacaccgggacacgcctaatccgaggagtgtccatgcttcat 19942382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 258 - 308
Target Start/End: Complemental strand, 10535734 - 10535684
Alignment:
Q  258 gtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcataga 308  Q
    ||||| |||||  |||||||||||||| ||||||||| |||||||||||||    
T  10535734 gtgtctgacaccaggacacgcctaatccgaggagtgttcgtgcttcataga 10535684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 256 - 294
Target Start/End: Original strand, 12224291 - 12224329
Alignment:
Q  256 acgtgtccgacactgggacacgcctaatcggaggagtgt 294  Q
    |||||||||||||||||||||||||||||  ||||||||    
T  12224291 acgtgtccgacactgggacacgcctaatccaaggagtgt 12224329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 261 - 307
Target Start/End: Complemental strand, 15907897 - 15907851
Alignment:
Q  261 tccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    |||||||| |||||||||| |||| || |||||||||||||||||||    
T  15907897 tccgacaccgggacacgcccaatctgatgagtgtccgtgcttcatag 15907851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 253 - 307
Target Start/End: Original strand, 15972938 - 15972992
Alignment:
Q  253 gacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    |||||||||||||| | ||||||| ||||||| || || ||||||||||||||||    
T  15972938 gacacgtgtccgacgccgggacacacctaatccgaagaatgtccgtgcttcatag 15972992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 257 - 303
Target Start/End: Complemental strand, 37411234 - 37411188
Alignment:
Q  257 cgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttc 303  Q
    ||||||||||||||||||||||||| || |||||||| | |||||||    
T  37411234 cgtgtccgacactgggacacgcctagtccgaggagtgcctgtgcttc 37411188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 258 - 307
Target Start/End: Complemental strand, 15909619 - 15909570
Alignment:
Q  258 gtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    ||||||||||| ||||||||||||||  || |||||| ||||||||||||    
T  15909619 gtgtccgacacagggacacgcctaattcgaagagtgttcgtgcttcatag 15909570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 306
Target Start/End: Complemental strand, 27286327 - 27286222
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacacg-----tgtccgacactgggacacgcctaatcggaggagtgtccgtgc 300  Q
    |||||||||| |||||||||| | |||||| |||| ||||| |||||||||||     |||||||||| ||||||   ||||||  | ||||||| ||||    
T  27286327 tcacataattaagtgtaattataggtgtcaatgtcatgtcgatgtcggacacgacacatgtccgacaccgggacatatctaatctaaagagtgtctgtgc 27286228  T
Q  301 ttcata 306  Q
    ||||||    
T  27286227 ttcata 27286222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 270 - 307
Target Start/End: Complemental strand, 34221500 - 34221463
Alignment:
Q  270 gggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    ||||||||||||||| ||||||| ||||||||||||||    
T  34221500 gggacacgcctaatccgaggagtttccgtgcttcatag 34221463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 59; Significance: 1e-24; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 206 - 307
Target Start/End: Original strand, 47989521 - 47989627
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacacg-----tgtccgacactgggacacgcctaatcggaggagtgtccgtgc 300  Q
    |||||||||| ||||||||||||||||||  ||||||||||||||||||||||     |||| ||||  ||||||||||||||| |||||||||||||||    
T  47989521 tcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacgacacatgtctgacatcgggacacgcctaatccgaggagtgtccgtgc 47989620  T
Q  301 ttcatag 307  Q
    |||||||    
T  47989621 ttcatag 47989627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 217 - 305
Target Start/End: Original strand, 17778581 - 17778670
Alignment:
Q  217 agtgtaattacaagtgtcactgtcgtgtcggtgtcg-gacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcat 305  Q
    ||||||||||||||||||  |||||||||||||||| |||||||||||||||| |||||| |||||||| ||| ||||| ||||||||||    
T  17778581 agtgtaattacaagtgtcggtgtcgtgtcggtgtcgcgacacgtgtccgacaccgggacatgcctaatccgagaagtgttcgtgcttcat 17778670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 206 - 305
Target Start/End: Complemental strand, 1486744 - 1486646
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcat 305  Q
    |||||||||| |||||||||| |||||||  |||||||||||   || ||||||||||||||| ||||||||||||||| |||||||||| |||||||||    
T  1486744 tcacataattcagtgtaattataagtgtcggtgtcgtgtcggacacg-acacgtgtccgacaccgggacacgcctaatccgaggagtgtctgtgcttcat 1486646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 206 - 307
Target Start/End: Original strand, 6427488 - 6427594
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggaca-----cgtgtccgacactgggacacgcctaatcggaggagtgtccgtgc 300  Q
    |||||||||| | ||||| ||||||||||| |||||||| || ||||||||     |||||||||||| ||||||||||||||| || ||||||||||||    
T  6427488 tcacataattcaatgtaactacaagtgtcagtgtcgtgtaggcgtcggacacgacacgtgtccgacaccgggacacgcctaatctgatgagtgtccgtgc 6427587  T
Q  301 ttcatag 307  Q
    |||||||    
T  6427588 ttcatag 6427594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 206 - 307
Target Start/End: Complemental strand, 15449267 - 15449170
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcat 305  Q
    |||||||||||||||||||||||||||||  |||||| ||||||||||||||||    ||||| | |||| ||||||||  ||||||||| |||||||||    
T  15449267 tcacataatttagtgtaattacaagtgtctgtgtcgtatcggtgtcggacacgt----gacaccgagacatgcctaatccaaggagtgtctgtgcttcat 15449172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 212 - 307
Target Start/End: Original strand, 40917779 - 40917879
Alignment:
Q  212 aatttagtgtaattacaagtgtcactgtcgtgtcggtgtcg-----gacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcata 306  Q
    |||| ||||||||||||||| ||  |||||||||||||| |     |||||||||||||||| ||||||||||||||| ||||| |||||||||||||||    
T  40917779 aattaagtgtaattacaagtctcggtgtcgtgtcggtgttggacacgacacgtgtccgacaccgggacacgcctaatccgaggactgtccgtgcttcata 40917878  T
Q  307 g 307  Q
    |    
T  40917879 g 40917879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 147 - 307
Target Start/End: Complemental strand, 18556548 - 18556385
Alignment:
Q  147 aagcactgatactgacagggcacactgatacaccgacacatctaataatttgnnnnnnntcacataatttagtgtaattacaagtgtcactgtcgtgtcg 246  Q
    |||||| ||||| |||| || ||||||| || |||||||| |||||||||||       |||||||||||| ||||||||||||| |   ||||||| ||    
T  18556548 aagcacggatacggacacgg-acactgacacgccgacacagctaataatttgaaaata-tcacataatttaatgtaattacaagtattggtgtcgtgacg 18556451  T
Q  247 gtgt-----cggacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    ||||     | ||||||| |||||||||||||||||||||||| ||| ||||||||||||||||||    
T  18556450 gtgtcagacccgacacgtatccgacactgggacacgcctaatccgagaagtgtccgtgcttcatag 18556385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 206 - 307
Target Start/End: Original strand, 25361910 - 25362012
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacacg---tgtccgacactgggacacgcctaatcggaggagtgtccgtgctt 302  Q
    |||||||||| |||||||||| | |||||| ||||||||||||||||||||||   |||||||||| || |||  ||||||| || ||||||||||||||    
T  25361910 tcacataattcagtgtaattatatgtgtcagtgtcgtgtcggtgtcggacacgacatgtccgacaccggaaca--cctaatccgaagagtgtccgtgctt 25362007  T
Q  303 catag 307  Q
    |||||    
T  25362008 catag 25362012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 206 - 307
Target Start/End: Complemental strand, 31694745 - 31694639
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcgg-----acacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgc 300  Q
    |||||||||| ||| ||||||||||||||  |||||||||||||||||     |||| | | |||||| || |||||||||||| |||||||||||||||    
T  31694745 tcacataattcagtataattacaagtgtcggtgtcgtgtcggtgtcggacacaacacatattcgacaccggaacacgcctaatctgaggagtgtccgtgc 31694646  T
Q  301 ttcatag 307  Q
    |||||||    
T  31694645 ttcatag 31694639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 206 - 307
Target Start/End: Complemental strand, 32461498 - 32461393
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcg-----gacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgc 300  Q
    |||||||||||| |||||||||||||||   ||| ||||||||||||     |||||||||| |||||||||||||||||||||  || |||||||||||    
T  32461498 tcacataatttaatgtaattacaagtgttggtgt-gtgtcggtgtcggacacgacacgtgtctgacactgggacacgcctaatccaagaagtgtccgtgc 32461400  T
Q  301 ttcatag 307  Q
    |||||||    
T  32461399 ttcatag 32461393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 253 - 307
Target Start/End: Original strand, 37598896 - 37598950
Alignment:
Q  253 gacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  37598896 gacacgtgtccgacaatgggacacgcctaatccgaggagtgtccgtgcttcatag 37598950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 208 - 308
Target Start/End: Complemental strand, 34712416 - 34712322
Alignment:
Q  208 acataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    ||||||||||||||||||| | |||||| |||||||||||      |||||||||| ||||||||||||| |||||   |||||||||||||||||||||    
T  34712416 acataatttagtgtaattatatgtgtcagtgtcgtgtcgg------acacgtgtcctacactgggacacgtctaattcaaggagtgtccgtgcttcatag 34712323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 206 - 308
Target Start/End: Original strand, 5944307 - 5944414
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacacg-----tgtccgacactgggacacgcctaatcggaggagtgtccgtgc 300  Q
    |||||||||| |||||||||| |||||||  |||||||||| || |||||||      |||||||||| |||| |||||||||| ||||||||| |||||    
T  5944307 tcacataattcagtgtaattataagtgtcggtgtcgtgtcgatgacggacacaacacatgtccgacaccgggatacgcctaatccgaggagtgttcgtgc 5944406  T
Q  301 ttcataga 308  Q
    ||||||||    
T  5944407 ttcataga 5944414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 257 - 307
Target Start/End: Original strand, 2218297 - 2218347
Alignment:
Q  257 cgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  2218297 cgtgtccgacactaggacacgcctaatctgaggagtgtccgtgcttcatag 2218347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 253 - 307
Target Start/End: Original strand, 9828120 - 9828174
Alignment:
Q  253 gacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    |||||||||||||||| |||||||| |||||| ||||||||||||||||||||||    
T  9828120 gacacgtgtccgacaccgggacacgtctaatccgaggagtgtccgtgcttcatag 9828174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 257 - 303
Target Start/End: Complemental strand, 48040464 - 48040418
Alignment:
Q  257 cgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttc 303  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||    
T  48040464 cgtgtccgacactgggacacgcctaattggaggagtgtccgtgcttc 48040418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 254 - 307
Target Start/End: Original strand, 18337395 - 18337448
Alignment:
Q  254 acacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    |||||||||||||||||||||| |||| ||| ||||||||||||||||||||||    
T  18337395 acacgtgtccgacactgggacatgcctgatccgaggagtgtccgtgcttcatag 18337448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 208 - 295
Target Start/End: Complemental strand, 6612204 - 6612112
Alignment:
Q  208 acataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacac-----gtgtccgacactgggacacgcctaatcggaggagtgtc 295  Q
    |||||||| ||||||||||||||||||  |||||||||| ||||||||||     |||||||||||  ||||||||||||||  |||||||||    
T  6612204 acataattcagtgtaattacaagtgtcggtgtcgtgtcgatgtcggacacgatatgtgtccgacaccaggacacgcctaatccaaggagtgtc 6612112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 258 - 305
Target Start/End: Complemental strand, 42359438 - 42359391
Alignment:
Q  258 gtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcat 305  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  42359438 gtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcat 42359391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 208 - 304
Target Start/End: Original strand, 21038109 - 21038202
Alignment:
Q  208 acataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttca 304  Q
    |||||||| |||||||| | | | |||| ||||||||||||||||||||||    |||||||| ||||||||||||| || ||||||| ||||||||    
T  21038109 acataattcagtgtaatcatatgcgtcagtgtcgtgtcggtgtcggacacg---acgacactgagacacgcctaatctgatgagtgtctgtgcttca 21038202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 307
Target Start/End: Complemental strand, 46348479 - 46348323
Alignment:
Q  143 tatgaagcactgatactgacagggcacactgatacaccgacacatctaataatttgnnnnnnntcacataatttagtgtaattacaagtgtcactgtcgt 242  Q
    |||||||||| ||||| |||| || ||||||| || |||||||| |||||||||||       ||| |||||||||||||||||||||||||      ||    
T  46348479 tatgaagcacggatacggacacgg-acactgacacgccgacacagctaataatttgaaaaaa-tcatataatttagtgtaattacaagtgtcg-----gt 46348387  T
Q  243 gtcggtgtcggacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    |||||   || ||||||||||||||| | ||||||||| ||| |||| |||||||||||||||||    
T  46348386 gtcggacacg-acacgtgtccgacaccgagacacgcctgatccgaggtgtgtccgtgcttcatag 46348323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 258 - 307
Target Start/End: Original strand, 15765828 - 15765877
Alignment:
Q  258 gtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    ||||| ||||||||||||||||||||| || |||||||||||||||||||    
T  15765828 gtgtctgacactgggacacgcctaatccgaagagtgtccgtgcttcatag 15765877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 206 - 307
Target Start/End: Complemental strand, 22515922 - 22515827
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcat 305  Q
    |||||||||||||||||||||||||||||      |||||||   || |||| | |||||||| | ||||||||||||| ||||||||||||||||||||    
T  22515922 tcacataatttagtgtaattacaagtgtcg-----gtgtcggacacg-acacatatccgacaccgagacacgcctaatccgaggagtgtccgtgcttcat 22515829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 270 - 310
Target Start/End: Complemental strand, 35919263 - 35919223
Alignment:
Q  270 gggacacgcctaatcggaggagtgtccgtgcttcatagaat 310  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  35919263 gggacacgcctaatcggaggactgtccgtgcttcatagaat 35919223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 258 - 305
Target Start/End: Complemental strand, 16297270 - 16297223
Alignment:
Q  258 gtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcat 305  Q
    |||||||||||  |||||||||||||| ||||||||||||||||||||    
T  16297270 gtgtccgacaccaggacacgcctaatccgaggagtgtccgtgcttcat 16297223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 256 - 307
Target Start/End: Original strand, 34741915 - 34741965
Alignment:
Q  256 acgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    ||||||||||||| ||||||||||||||| || |||||||||||||||||||    
T  34741915 acgtgtccgacac-gggacacgcctaatccgaagagtgtccgtgcttcatag 34741965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 308
Target Start/End: Complemental strand, 1705056 - 1704934
Alignment:
Q  176 acaccgacacatctaataatttgnnnnnnntcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacacgtgtccgacactgggaca 275  Q
    |||||||||||||||||||||||       |||||||||| || |||||||||||||||  |||||||||          ||||||||||||| | ||||    
T  1705056 acaccgacacatctaataatttgaaaaaa-tcacataattcagggtaattacaagtgtcggtgtcgtgtca---------acgtgtccgacaccgagaca 1704967  T
Q  276 cgcctaatcggaggagtgtccgtgcttcataga 308  Q
    |||||||||  |||||||||| |||||||||||    
T  1704966 cgcctaatccaaggagtgtccatgcttcataga 1704934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 253 - 307
Target Start/End: Original strand, 1815322 - 1815376
Alignment:
Q  253 gacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    ||||| |||||||||| ||||||||||||||| |||||||| ||||| |||||||    
T  1815322 gacacatgtccgacaccgggacacgcctaatctgaggagtgaccgtgattcatag 1815376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 253 - 307
Target Start/End: Complemental strand, 5898260 - 5898206
Alignment:
Q  253 gacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    ||||||||||| |||| |||||||| |||||| ||||||||||||||||| ||||    
T  5898260 gacacgtgtccaacaccgggacacgtctaatccgaggagtgtccgtgctttatag 5898206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 206 - 307
Target Start/End: Complemental strand, 16164350 - 16164244
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcgg-----acacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgc 300  Q
    |||||||||||| |||||||| | |||||| |||||||| ||||| ||     |||||||||||||||  |||||||||||||| || ||||||  |||     
T  16164350 tcacataatttaatgtaattatatgtgtcattgtcgtgttggtgttggacgcaacacgtgtccgacaccaggacacgcctaatccgaagagtgtatgtgt 16164251  T
Q  301 ttcatag 307  Q
    |||||||    
T  16164250 ttcatag 16164244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 261 - 307
Target Start/End: Original strand, 16812629 - 16812675
Alignment:
Q  261 tccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    ||||| || ||||||||||||||| ||||||||||||||||||||||    
T  16812629 tccgaaaccgggacacgcctaatctgaggagtgtccgtgcttcatag 16812675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 261 - 307
Target Start/End: Complemental strand, 21366038 - 21365992
Alignment:
Q  261 tccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    |||||||| | ||||||||||||| ||||||||||||||||||||||    
T  21366038 tccgacaccgagacacgcctaatccgaggagtgtccgtgcttcatag 21365992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 269 - 307
Target Start/End: Complemental strand, 35702580 - 35702542
Alignment:
Q  269 tgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  35702580 tgggacacgcctaatccgaggagtgtccgtgcttcatag 35702542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 257 - 307
Target Start/End: Complemental strand, 46940798 - 46940748
Alignment:
Q  257 cgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    |||||||||||| || |||||||||||| ||||||||| ||||||||||||    
T  46940798 cgtgtccgacaccggaacacgcctaatccgaggagtgttcgtgcttcatag 46940748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 241 - 308
Target Start/End: Original strand, 52903297 - 52903366
Alignment:
Q  241 gtgtcggtgtcggacacgtgt--ccgacactgggacacgcctaatcggaggagtgtccgtgcttcataga 308  Q
    |||||||||||||||||||||  ||||||| |||||||| || ||  || ||||||||||||||||||||    
T  52903297 gtgtcggtgtcggacacgtgtgtccgacaccgggacacggcttattcgaagagtgtccgtgcttcataga 52903366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 262 - 307
Target Start/End: Original strand, 6574051 - 6574096
Alignment:
Q  262 ccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    |||||||||||||||||||||||  ||||||| |||||||||||||    
T  6574051 ccgacactgggacacgcctaatccaaggagtgaccgtgcttcatag 6574096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 254 - 307
Target Start/End: Complemental strand, 19562608 - 19562556
Alignment:
Q  254 acacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    ||||||||||||||| ||||||| ||||||| ||||||||| ||||||||||||    
T  19562608 acacgtgtccgacacagggacacacctaatccgaggagtgt-cgtgcttcatag 19562556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 258 - 307
Target Start/End: Complemental strand, 29144369 - 29144320
Alignment:
Q  258 gtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    ||||||||||| || |||||||||||| || |||||||||||||||||||    
T  29144369 gtgtccgacaccggaacacgcctaatccgaagagtgtccgtgcttcatag 29144320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 253 - 306
Target Start/End: Complemental strand, 40258927 - 40258874
Alignment:
Q  253 gacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcata 306  Q
    ||||| ||||||||||  |||||||||||||| ||||||||||| |||||||||    
T  40258927 gacacctgtccgacaccaggacacgcctaatccgaggagtgtccatgcttcata 40258874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 258 - 306
Target Start/End: Original strand, 10233326 - 10233374
Alignment:
Q  258 gtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcata 306  Q
    |||||||||||  |||||| ||||||| |||||||||||||||||||||    
T  10233326 gtgtccgacaccaggacacacctaatcagaggagtgtccgtgcttcata 10233374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 263 - 307
Target Start/End: Complemental strand, 22881611 - 22881567
Alignment:
Q  263 cgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    |||||| |||||||| |||||| ||||||||||||||||||||||    
T  22881611 cgacaccgggacacgtctaatccgaggagtgtccgtgcttcatag 22881567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 271 - 307
Target Start/End: Original strand, 22947813 - 22947849
Alignment:
Q  271 ggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    |||||||||||||| ||||||||||||||||||||||    
T  22947813 ggacacgcctaatccgaggagtgtccgtgcttcatag 22947849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 260 - 308
Target Start/End: Complemental strand, 23531781 - 23531733
Alignment:
Q  260 gtccgacactgggacacgcctaatcggaggagtgtccgtgcttcataga 308  Q
    |||||||||||  |||||| ||||||||||||||| |||||||||||||    
T  23531781 gtccgacactgaaacacgcttaatcggaggagtgttcgtgcttcataga 23531733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 254 - 302
Target Start/End: Original strand, 26830653 - 26830701
Alignment:
Q  254 acacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgctt 302  Q
    |||||||| ||| || ||||||||||||||| |||||||||||||||||    
T  26830653 acacgtgttcgataccgggacacgcctaatcagaggagtgtccgtgctt 26830701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 208 - 307
Target Start/End: Complemental strand, 30173795 - 30173691
Alignment:
Q  208 acataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacacg-----tgtccgacactgggacacgcctaatcggaggagtgtccgtgctt 302  Q
    |||||| | ||||||||||||||||||  ||||||||| || |||||||||     |||||||| || |||||||||||| | || || | |||||||||    
T  30173795 acataactcagtgtaattacaagtgtcggtgtcgtgtccgtatcggacacgacacatgtccgactctaggacacgcctaacccgacgaatatccgtgctt 30173696  T
Q  303 catag 307  Q
    |||||    
T  30173695 catag 30173691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 263 - 307
Target Start/End: Original strand, 36878541 - 36878585
Alignment:
Q  263 cgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    |||||| |||||||||||||||  |||||||||||||||||||||    
T  36878541 cgacacggggacacgcctaatcccaggagtgtccgtgcttcatag 36878585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 206 - 258
Target Start/End: Original strand, 44482254 - 44482306
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacacg 258  Q
    |||||||||| |||||||||| | |||||  ||||||||||||||||||||||    
T  44482254 tcacataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacg 44482306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 253 - 308
Target Start/End: Complemental strand, 17831516 - 17831461
Alignment:
Q  253 gacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcataga 308  Q
    |||| ||||||||||| |||||||||||||||  |||||||||| || ||||||||    
T  17831516 gacatgtgtccgacaccgggacacgcctaatcttaggagtgtccatgtttcataga 17831461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 217 - 307
Target Start/End: Original strand, 25934651 - 25934746
Alignment:
Q  217 agtgtaattacaagtgtcactgtcgtgtcggtgtcggacacg-----tgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    |||||||||| | |||||  | ||||||||||||||||||||     |||| ||||| |||| |||||| |||  |||||||||||||||||||||    
T  25934651 agtgtaattatatgtgtcggtatcgtgtcggtgtcggacacgacacgtgtctgacacggggatacgccttatccaaggagtgtccgtgcttcatag 25934746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 264 - 307
Target Start/End: Complemental strand, 27965983 - 27965940
Alignment:
Q  264 gacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    ||||| ||||||||||||||| ||||||||||| ||||||||||    
T  27965983 gacaccgggacacgcctaatccgaggagtgtccatgcttcatag 27965940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 307
Target Start/End: Original strand, 51410022 - 51410144
Alignment:
Q  179 ccgacacatctaataatttgnnnnnnntcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacacgtgtccgacactgggacacgc 278  Q
    ||||||||||||||||||||       |||||||||| ||||||||||||||||||      |||||||   | ||||||| |||||||| | |||||||    
T  51410022 ccgacacatctaataatttgaaaaaaatcacataattcagtgtaattacaagtgtc-----ggtgtcggacac-gacacgtatccgacaccgagacacgc 51410115  T
Q  279 ctaatcggaggagtgtccgtgcttcatag 307  Q
    ||||||  |||||| | ||||||||||||    
T  51410116 ctaatccaaggagtattcgtgcttcatag 51410144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 257 - 307
Target Start/End: Original strand, 113362 - 113412
Alignment:
Q  257 cgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    ||||||| |||| ||||||||||||||| |||||||| || ||||||||||    
T  113362 cgtgtccaacaccgggacacgcctaatccgaggagtgcccatgcttcatag 113412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 208 - 258
Target Start/End: Complemental strand, 5376533 - 5376483
Alignment:
Q  208 acataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacacg 258  Q
    |||||||| |||||||||| |||||||  |||||||||| |||||||||||    
T  5376533 acataattcagtgtaattaaaagtgtcggtgtcgtgtcgatgtcggacacg 5376483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 253 - 307
Target Start/End: Complemental strand, 9690267 - 9690213
Alignment:
Q  253 gacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    |||||||||||||||| ||||||||||||||| |  ||||||  |||||||||||    
T  9690267 gacacgtgtccgacaccgggacacgcctaatccggagagtgtttgtgcttcatag 9690213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 257 - 306
Target Start/End: Complemental strand, 10577725 - 10577676
Alignment:
Q  257 cgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcata 306  Q
    |||||| ||||| ||||||||||| |||  ||||||||||||||||||||    
T  10577725 cgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 10577676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 254 - 307
Target Start/End: Complemental strand, 18190101 - 18190048
Alignment:
Q  254 acacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    ||||||||||||||| ||||||| ||||||| |||||||||  | |||||||||    
T  18190101 acacgtgtccgacaccgggacacacctaatccgaggagtgtatgcgcttcatag 18190048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 307
Target Start/End: Complemental strand, 20157385 - 20157284
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcat 305  Q
    |||||||||| |||||||| | | |||||  ||||||||| |   | ||| |||||||||||| | ||||| ||||||  ||||||| ||||||||||||    
T  20157385 tcacataattcagtgtaatcatatgtgtcggtgtcgtgtccgacaccgacgcgtgtccgacaccgagacacacctaatttgaggagtatccgtgcttcat 20157286  T
Q  306 ag 307  Q
    ||    
T  20157285 ag 20157284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 270 - 307
Target Start/End: Original strand, 30359447 - 30359484
Alignment:
Q  270 gggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    |||||||||| |||| ||||||||||||||||||||||    
T  30359447 gggacacgccaaatctgaggagtgtccgtgcttcatag 30359484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 271 - 312
Target Start/End: Complemental strand, 38078637 - 38078596
Alignment:
Q  271 ggacacgcctaatcggaggagtgtccgtgcttcatagaatat 312  Q
    |||||||||||||| ||||||| | |||||||||||||||||    
T  38078637 ggacacgcctaatccgaggagtattcgtgcttcatagaatat 38078596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 56; Significance: 8e-23; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 206 - 308
Target Start/End: Original strand, 241618 - 241725
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggaca-----cgtgtccgacactgggacacgcctaatcggaggagtgtccgtgc 300  Q
    |||||||||||||||||||||  ||||||  |||||||| |||||||||||     |||||||||||| ||||||||||||||| ||| |||||||||||    
T  241618 tcacataatttagtgtaattatgagtgtcggtgtcgtgttggtgtcggacacgacacgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgc 241717  T
Q  301 ttcataga 308  Q
    ||||||||    
T  241718 ttcataga 241725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 257 - 307
Target Start/End: Complemental strand, 236964 - 236914
Alignment:
Q  257 cgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    |||||| ||||| ||||||| ||||||| |||||||||| |||||||||||    
T  236964 cgtgtctgacaccgggacacacctaatctgaggagtgtctgtgcttcatag 236914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 55; Significance: 3e-22; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 206 - 307
Target Start/End: Complemental strand, 3884 - 3778
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacacg-----tgtccgacactgggacacgcctaatcggaggagtgtccgtgc 300  Q
    |||||||||| ||||||||||||||||||| |||||||| |||||||||||||     |||||||||  | ||||||||||||| ||||||||||| |||    
T  3884 tcacataattcagtgtaattacaagtgtcagtgtcgtgttggtgtcggacacgacacatgtccgacatcgagacacgcctaatccgaggagtgtccttgc 3785  T
Q  301 ttcatag 307  Q
    |||||||    
T  3784 ttcatag 3778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 55; Significance: 3e-22; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 206 - 307
Target Start/End: Original strand, 71749 - 71855
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacac-----gtgtccgacactgggacacgcctaatcggaggagtgtccgtgc 300  Q
    ||||| |||| ||||||||||| ||||||| |||||||||||||||||||||     ||||||||||| |||||||| |||||| |||||||||| ||||    
T  71749 tcacacaattcagtgtaattactagtgtcagtgtcgtgtcggtgtcggacacaacacgtgtccgacaccgggacacgactaatccgaggagtgtcggtgc 71848  T
Q  301 ttcatag 307  Q
    |||||||    
T  71849 ttcatag 71855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 3e-22; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 206 - 307
Target Start/End: Original strand, 22652000 - 22652106
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacacg-----tgtccgacactgggacacgcctaatcggaggagtgtccgtgc 300  Q
    |||||||||| | | ||||||||||||||  ||||||||||||||||||||||     |||||||||| |||||||| |||||| |||||||||||||||    
T  22652000 tcacataattcaatataattacaagtgtcggtgtcgtgtcggtgtcggacacgacatgtgtccgacaccgggacacgtctaatccgaggagtgtccgtgc 22652099  T
Q  301 ttcatag 307  Q
    |||||||    
T  22652100 ttcatag 22652106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 206 - 307
Target Start/End: Complemental strand, 15816164 - 15816058
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacacgtg-----tccgacactgggacacgcctaatcggaggagtgtccgtgc 300  Q
    ||||||||||||||||||||| |||||||  |||||||| |||||||||||||       |||||||| ||||||||||||||| ||| |||||||||||    
T  15816164 tcacataatttagtgtaattataagtgtcggtgtcgtgttggtgtcggacacgacacgaatccgacaccgggacacgcctaatccgagaagtgtccgtgc 15816065  T
Q  301 ttcatag 307  Q
    |||||||    
T  15816064 ttcatag 15816058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 206 - 307
Target Start/End: Complemental strand, 29510339 - 29510233
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacacg-----tgtccgacactgggacacgcctaatcggaggagtgtccgtgc 300  Q
    ||||| |||| ||| ||||||||||||||  ||| ||||||||||||||||||     |||||||||| ||||||| ||||||| |||||||||||||||    
T  29510339 tcacaaaattcagtataattacaagtgtcggtgtagtgtcggtgtcggacacgacgcgtgtccgacaccgggacacacctaatccgaggagtgtccgtgc 29510240  T
Q  301 ttcatag 307  Q
    |||||||    
T  29510239 ttcatag 29510233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 206 - 307
Target Start/End: Complemental strand, 22197777 - 22197671
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtc-gtgtcggtgtcg-----gacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtg 299  Q
    |||||||||||||||||||||||||||||| |||| ||||| ||||||     |||||||||||||||| ||  ||||||||||| ||||||||||||||    
T  22197777 tcacataatttagtgtaattacaagtgtcagtgtcagtgtc-gtgtcggacatgacacgtgtccgacaccggatcacgcctaatctgaggagtgtccgtg 22197679  T
Q  300 cttcatag 307  Q
    ||| ||||    
T  22197678 ctttatag 22197671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 206 - 308
Target Start/End: Original strand, 29447468 - 29447575
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacacg-----tgtccgacactgggacacgcctaatcggaggagtgtccgtgc 300  Q
    |||||||||| |||||||||| | ||||   ||||||||||||||| ||||||     |||||||||| |||||| | ||||||||||||||||||||||    
T  29447468 tcacataattaagtgtaattatatgtgttggtgtcgtgtcggtgtcagacacgacatgtgtccgacaccgggacaggtctaatcggaggagtgtccgtgc 29447567  T
Q  301 ttcataga 308  Q
    ||||||||    
T  29447568 ttcataga 29447575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 206 - 307
Target Start/End: Original strand, 8343340 - 8343446
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggaca-----cgtgtccgacactgggacacgcctaatcggaggagtgtccgtgc 300  Q
    |||||||||||||||||||||||||||||| ||||||    ||||| ||||     |||||||||||| ||||||||||||||| || ||||||| ||||    
T  8343340 tcacataatttagtgtaattacaagtgtcagtgtcgtacacgtgtccgacacgacacgtgtccgacaccgggacacgcctaatccgaagagtgtctgtgc 8343439  T
Q  301 ttcatag 307  Q
    |||||||    
T  8343440 ttcatag 8343446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 253 - 303
Target Start/End: Original strand, 5813657 - 5813707
Alignment:
Q  253 gacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttc 303  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  5813657 gacacgtgtccgacaccgggacacgcctaattggaggagtgtccgtgcttc 5813707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 241 - 307
Target Start/End: Original strand, 8343020 - 8343086
Alignment:
Q  241 gtgtcggtgtcggacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    |||||||||||| ||| ||||||||||| ||||||||||||||| || ||||||| |||||||||||    
T  8343020 gtgtcggtgtcgtacatgtgtccgacaccgggacacgcctaatccgaagagtgtctgtgcttcatag 8343086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 253 - 307
Target Start/End: Original strand, 18407784 - 18407838
Alignment:
Q  253 gacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    ||||| ||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  18407784 gacacatgtccgacactaggacacgcctaattggaggagtgtccgtgcttcatag 18407838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 206 - 306
Target Start/End: Complemental strand, 29447145 - 29447040
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacacg-----tgtccgacactgggacacgcctaatcggaggagtgtccgtgc 300  Q
    |||||||||| | ||||| ||||||||||  |||| |||||||||||||||||     |||| |||||  ||||||||||||||  ||||||||||||||    
T  29447145 tcacataattcaatgtaactacaagtgtcggtgtcatgtcggtgtcggacacgacatgtgtctgacaccaggacacgcctaatcctaggagtgtccgtgc 29447046  T
Q  301 ttcata 306  Q
    ||||||    
T  29447045 ttcata 29447040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 206 - 258
Target Start/End: Complemental strand, 2572091 - 2572039
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacacg 258  Q
    |||||||||||||||||||||||||||||  ||||||||| ||||||||||||    
T  2572091 tcacataatttagtgtaattacaagtgtcggtgtcgtgtctgtgtcggacacg 2572039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 219 - 307
Target Start/End: Original strand, 21465449 - 21465542
Alignment:
Q  219 tgtaattacaagtgtcactgtcgtgtcggtgtcggaca-----cgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    |||||||||||||||   ||||||||| ||||||||||     ||||||| |||| |||| |||||||||  ||||||||||||||||||||||    
T  21465449 tgtaattacaagtgttggtgtcgtgtcagtgtcggacacgacacgtgtccaacacagggatacgcctaatttgaggagtgtccgtgcttcatag 21465542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 258 - 307
Target Start/End: Complemental strand, 30068017 - 30067968
Alignment:
Q  258 gtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    ||||||||||||||||||| ||||||| || |||||||||||||||||||    
T  30068017 gtgtccgacactgggacacacctaatccgatgagtgtccgtgcttcatag 30067968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 253 - 305
Target Start/End: Original strand, 3025616 - 3025668
Alignment:
Q  253 gacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcat 305  Q
    |||||||||| ||||||| |||||| |||||| ||||||||||||||||||||    
T  3025616 gacacgtgtctgacactgtgacacggctaatccgaggagtgtccgtgcttcat 3025668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 253 - 308
Target Start/End: Complemental strand, 26902158 - 26902103
Alignment:
Q  253 gacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcataga 308  Q
    |||||||||| | ||| ||||||||||| ||| |||||||||||||||||||||||    
T  26902158 gacacgtgtctggcacggggacacgccttatctgaggagtgtccgtgcttcataga 26902103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 219 - 258
Target Start/End: Complemental strand, 27067322 - 27067283
Alignment:
Q  219 tgtaattacaagtgtcactgtcgtgtcggtgtcggacacg 258  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  27067322 tgtaattacaagtgtcagtgtcgtgtcggtgtcggacacg 27067283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 237 - 307
Target Start/End: Complemental strand, 34451036 - 34450961
Alignment:
Q  237 tgtcgtgtcggtgtcggacacg-----tgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    ||||||||||||||||||||||     |||| ||||| ||||||||||| |||  |||||||||||||||||||||    
T  34451036 tgtcgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 34450961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 253 - 307
Target Start/End: Original strand, 11803335 - 11803389
Alignment:
Q  253 gacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    ||||| |||||||||| || ||||| |||||| ||||||||||||||||||||||    
T  11803335 gacacatgtccgacacaggtacacgtctaatccgaggagtgtccgtgcttcatag 11803389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 253 - 295
Target Start/End: Complemental strand, 22943343 - 22943301
Alignment:
Q  253 gacacgtgtccgacactgggacacgcctaatcggaggagtgtc 295  Q
    |||||||||||||||| ||||||||||||||| ||||||||||    
T  22943343 gacacgtgtccgacaccgggacacgcctaatccgaggagtgtc 22943301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 264 - 302
Target Start/End: Complemental strand, 31109501 - 31109463
Alignment:
Q  264 gacactgggacacgcctaatcggaggagtgtccgtgctt 302  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  31109501 gacactgggacacgcctaatccgaggagtgtccgtgctt 31109463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 257 - 307
Target Start/End: Complemental strand, 36450744 - 36450694
Alignment:
Q  257 cgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    ||||||||||||  |||||||||||||| |||||||||| |||||||||||    
T  36450744 cgtgtccgacaccaggacacgcctaatccgaggagtgtctgtgcttcatag 36450694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 257 - 307
Target Start/End: Original strand, 39820498 - 39820547
Alignment:
Q  257 cgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    |||||||||||| ||||||||||||||| ||| ||||||||||||||||||    
T  39820498 cgtgtccgacac-gggacacgcctaatccgagaagtgtccgtgcttcatag 39820547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 262 - 307
Target Start/End: Original strand, 17751730 - 17751775
Alignment:
Q  262 ccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    ||||||| ||||||||||||||| |||||||||||| |||||||||    
T  17751730 ccgacaccgggacacgcctaatccgaggagtgtccgcgcttcatag 17751775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 262 - 307
Target Start/End: Original strand, 17760717 - 17760762
Alignment:
Q  262 ccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    ||||||| ||||||||||||||| |||||||||||| |||||||||    
T  17760717 ccgacaccgggacacgcctaatccgaggagtgtccgcgcttcatag 17760762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 206 - 307
Target Start/End: Original strand, 24858036 - 24858135
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcat 305  Q
    |||||||||| |||||||| |||||||||  |||||||||||   || ||| |||||| || | ||||||||||||||| |||||||||  |||||||||    
T  24858036 tcacataattcagtgtaat-acaagtgtcgttgtcgtgtcggacacg-acatgtgtcccacgccgggacacgcctaatcagaggagtgtttgtgcttcat 24858133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 253 - 305
Target Start/End: Complemental strand, 926782 - 926730
Alignment:
Q  253 gacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcat 305  Q
    |||||||||||||||| |||||| || | ||| ||||||||||||||||||||    
T  926782 gacacgtgtccgacaccgggacatgctttatccgaggagtgtccgtgcttcat 926730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 257 - 305
Target Start/End: Original strand, 44067596 - 44067644
Alignment:
Q  257 cgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcat 305  Q
    ||||||||||||  |||||||||||||  ||||||||||||||||||||    
T  44067596 cgtgtccgacaccaggacacgcctaattcgaggagtgtccgtgcttcat 44067644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 254 - 305
Target Start/End: Complemental strand, 20679388 - 20679337
Alignment:
Q  254 acacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcat 305  Q
    ||||||||||||||| ||||||||||| | | ||||||||||| ||||||||    
T  20679388 acacgtgtccgacaccgggacacgccttaaccgaggagtgtccatgcttcat 20679337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 272 - 307
Target Start/End: Original strand, 31514938 - 31514973
Alignment:
Q  272 gacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    ||||||||||||| ||||||||||||||||||||||    
T  31514938 gacacgcctaatccgaggagtgtccgtgcttcatag 31514973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 258 - 309
Target Start/End: Original strand, 40064032 - 40064083
Alignment:
Q  258 gtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatagaa 309  Q
    ||||||||||| |||||||  |||||| |||||||||||||||| |||||||    
T  40064032 gtgtccgacaccgggacacatctaatccgaggagtgtccgtgctacatagaa 40064083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 253 - 304
Target Start/End: Original strand, 40332256 - 40332307
Alignment:
Q  253 gacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttca 304  Q
    ||||||||||| |||| ||||| ||||||||| |||||||||||||| ||||    
T  40332256 gacacgtgtcccacaccgggacgcgcctaatccgaggagtgtccgtgtttca 40332307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 253 - 307
Target Start/End: Complemental strand, 3951530 - 3951476
Alignment:
Q  253 gacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    |||||||||| ||||| || ||||||||||||  |||||| ||||||||||||||    
T  3951530 gacacgtgtctgacacgggaacacgcctaatccaaggagtttccgtgcttcatag 3951476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 253 - 307
Target Start/End: Complemental strand, 4298882 - 4298830
Alignment:
Q  253 gacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    ||||||||| |||||| ||||||||||||||| ||||||||| ||||||||||||    
T  4298882 gacacgtgttcgacac-gggacacgcctaatctgaggagtgt-cgtgcttcatag 4298830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 254 - 308
Target Start/End: Complemental strand, 12570491 - 12570437
Alignment:
Q  254 acacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcataga 308  Q
    |||||||||||||||  |||||||||||||| || || ||||||||||| |||||    
T  12570491 acacgtgtccgacaccaggacacgcctaatctgaagattgtccgtgctttataga 12570437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 254 - 308
Target Start/End: Complemental strand, 12570717 - 12570663
Alignment:
Q  254 acacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcataga 308  Q
    |||||||||||||||  |||||||||||||| || || ||||||||||| |||||    
T  12570717 acacgtgtccgacaccaggacacgcctaatctgaagattgtccgtgctttataga 12570663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 253 - 307
Target Start/End: Original strand, 14134764 - 14134818
Alignment:
Q  253 gacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    |||||||||||| |||  |||||||||||||  |||||||||||||| |||||||    
T  14134764 gacacgtgtccgtcaccaggacacgcctaattcgaggagtgtccgtgtttcatag 14134818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 219 - 257
Target Start/End: Complemental strand, 24764847 - 24764809
Alignment:
Q  219 tgtaattacaagtgtcactgtcgtgtcggtgtcggacac 257  Q
    |||||| ||| ||||||||||||||||||||||||||||    
T  24764847 tgtaatcacatgtgtcactgtcgtgtcggtgtcggacac 24764809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 270 - 308
Target Start/End: Original strand, 25566912 - 25566950
Alignment:
Q  270 gggacacgcctaatcggaggagtgtccgtgcttcataga 308  Q
    ||||||||||||||| |||||||||| ||||||||||||    
T  25566912 gggacacgcctaatccgaggagtgtctgtgcttcataga 25566950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 272 - 309
Target Start/End: Complemental strand, 11927050 - 11927013
Alignment:
Q  272 gacacgcctaatcggaggagtgtccgtgcttcatagaa 309  Q
    ||||||||||||| || |||||||||||||||||||||    
T  11927050 gacacgcctaatccgatgagtgtccgtgcttcatagaa 11927013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 263 - 308
Target Start/End: Complemental strand, 13436954 - 13436909
Alignment:
Q  263 cgacactgggacacgcctaatcggaggagtgtccgtgcttcataga 308  Q
    |||||| |||||||||||||||  ||||||||| ||||||||||||    
T  13436954 cgacaccgggacacgcctaatccaaggagtgtctgtgcttcataga 13436909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 251
Target Start/End: Complemental strand, 24362237 - 24362192
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtc 251  Q
    |||||||||| |||||||||| | |||||| |||||||||||||||    
T  24362237 tcacataattcagtgtaattatatgtgtcaatgtcgtgtcggtgtc 24362192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 251
Target Start/End: Original strand, 25566865 - 25566910
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtc 251  Q
    |||||||||| ||||||||||||||||||  |||||||| ||||||    
T  25566865 tcacataattcagtgtaattacaagtgtcggtgtcgtgttggtgtc 25566910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 258 - 307
Target Start/End: Original strand, 27213595 - 27213644
Alignment:
Q  258 gtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    ||||| ||||| |||||||| |||||| ||| ||||||||||||||||||    
T  27213595 gtgtcggacaccgggacacggctaatccgagaagtgtccgtgcttcatag 27213644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 3e-22; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 218 - 307
Target Start/End: Complemental strand, 41961673 - 41961579
Alignment:
Q  218 gtgtaattacaagtgtcactgtcgtgtcggtgtcggacacg-----tgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    |||||||||||||||||  |||||||||||| |||||||||     |||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  41961673 gtgtaattacaagtgtcggtgtcgtgtcggtatcggacacgacacgtgtccgacactgggacacgcctaatccgagaagtgtccgtgcttcatag 41961579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 206 - 307
Target Start/End: Original strand, 27505270 - 27505370
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcat 305  Q
    |||||||||| ||||||||||||||||||  ||||||||| |   || ||||||||||||||| |||||| |||||||| ||||||||||||||||||||    
T  27505270 tcacataattaagtgtaattacaagtgtcggtgtcgtgtctgacacg-acacgtgtccgacaccgggacatgcctaatccgaggagtgtccgtgcttcat 27505368  T
Q  306 ag 307  Q
    ||    
T  27505369 ag 27505370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 206 - 307
Target Start/End: Complemental strand, 34185158 - 34185052
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacacg-----tgtccgacactgggacacgcctaatcggaggagtgtccgtgc 300  Q
    ||||| |||| ||||||||||||||||||  |||||||||  ||||||||| |     |||||||||| ||||||||||||||| |||||||||||||||    
T  34185158 tcacacaattcagtgtaattacaagtgtcggtgtcgtgtccatgtcggacaagacatgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgc 34185059  T
Q  301 ttcatag 307  Q
    |||||||    
T  34185058 ttcatag 34185052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 168 - 307
Target Start/End: Original strand, 55401062 - 55401194
Alignment:
Q  168 acactgatacaccgacacatctaataatttgnnnnnnntcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacacgtgtccgaca 267  Q
    |||||||||| |||||||| |||||||||||       |||||||||||||||||||||||||||||      |||||||   || ||||||||||||||    
T  55401062 acactgatacgccgacacaactaataatttgaaaaaa-tcacataatttagtgtaattacaagtgtcg-----gtgtcggacacg-acacgtgtccgaca 55401154  T
Q  268 ctgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    | | ||||||||||||| ||||||||||||||||||||||    
T  55401155 ccgagacacgcctaatccgaggagtgtccgtgcttcatag 55401194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 206 - 305
Target Start/End: Complemental strand, 4987326 - 4987222
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcg-----gacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgc 300  Q
    |||||||||| |||||||||||||||||   || ||||||||||| |     |||||||||||||||| ||||||||||||||| ||||||||||||| |    
T  4987326 tcacataattcagtgtaattacaagtgttggtgacgtgtcggtgttggacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtac 4987227  T
Q  301 ttcat 305  Q
    |||||    
T  4987226 ttcat 4987222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 207 - 307
Target Start/End: Original strand, 17276750 - 17276846
Alignment:
Q  207 cacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcata 306  Q
    |||||||||| || ||||||||||||||| ||||||||||||    |||||||||||||||| | ||| | ||||||| ||| |||||||||||||||||    
T  17276750 cacataatttggtataattacaagtgtcagtgtcgtgtcggt----gacacgtgtccgacaccgagacgcacctaatccgagaagtgtccgtgcttcata 17276845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 206 - 307
Target Start/End: Original strand, 14209137 - 14209243
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacacg-----tgtccgacactgggacacgcctaatcggaggagtgtccgtgc 300  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||||||||||     ||| |||||  |||| || |||||||  || |||||||||||    
T  14209137 tcacataattcagtgtaattacaagtgtcagtgtcgtgtcggtgtcggacacgacacgtgtacgacatcgggatacacctaatccaagaagtgtccgtgc 14209236  T
Q  301 ttcatag 307  Q
    |||||||    
T  14209237 ttcatag 14209243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 210 - 306
Target Start/End: Original strand, 14216920 - 14217021
Alignment:
Q  210 ataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacacg-----tgtccgacactgggacacgcctaatcggaggagtgtccgtgcttca 304  Q
    |||||| ||||||||||||||||||  ||||||||  ||||||||||||     ||| |||||||||||||| ||||||| ||| |||||||||||||||    
T  14216920 ataattcagtgtaattacaagtgtccgtgtcgtgttagtgtcggacacgacacgtgtacgacactgggacacacctaatccgagaagtgtccgtgcttca 14217019  T
Q  305 ta 306  Q
    ||    
T  14217020 ta 14217021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 210 - 306
Target Start/End: Original strand, 14223049 - 14223150
Alignment:
Q  210 ataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacacg-----tgtccgacactgggacacgcctaatcggaggagtgtccgtgcttca 304  Q
    |||||| ||||||||||||||||||  ||||||||  ||||||||||||     ||| |||||||||||||| ||||||| ||| |||||||||||||||    
T  14223049 ataattcagtgtaattacaagtgtccgtgtcgtgttagtgtcggacacgacacgtgtacgacactgggacacacctaatccgagaagtgtccgtgcttca 14223148  T
Q  305 ta 306  Q
    ||    
T  14223149 ta 14223150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 244 - 307
Target Start/End: Complemental strand, 8101955 - 8101892
Alignment:
Q  244 tcggtgtcggacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    ||||||||||||||||||| |||||||| ||||| |||||| ||||||||| ||||||||||||    
T  8101955 tcggtgtcggacacgtgtcggacactggtacacgtctaatctgaggagtgttcgtgcttcatag 8101892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 257 - 315
Target Start/End: Original strand, 11610578 - 11610636
Alignment:
Q  257 cgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatagaatattag 315  Q
    |||||||||||  ||||||||||||||| ||||||||||||||||||||||| ||||||    
T  11610578 cgtgtccgacatcgggacacgcctaatctgaggagtgtccgtgcttcatagattattag 11610636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 206 - 305
Target Start/End: Original strand, 28918025 - 28918120
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcat 305  Q
    |||||||||| ||||||||||||||||||  |||||||   |   || |||||||||||||||||||||||||||||||  |||||||||| ||||||||    
T  28918025 tcacataattcagtgtaattacaagtgtcggtgtcgtg---gacacg-acacgtgtccgacactgggacacgcctaatccaaggagtgtccctgcttcat 28918120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 206 - 306
Target Start/End: Original strand, 34910341 - 34910435
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcat 305  Q
    |||||||||| |||||||||||||| |||  |||||| |||||||||||||       ||||| |||||||| |||||| ||||||||||||||||||||    
T  34910341 tcacataattcagtgtaattacaagagtcggtgtcgtatcggtgtcggaca------tgacaccgggacacgtctaatccgaggagtgtccgtgcttcat 34910434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 253 - 307
Target Start/End: Original strand, 10955017 - 10955074
Alignment:
Q  253 gacacgtgtccgacactgggacacgcctaatc---ggaggagtgtccgtgcttcatag 307  Q
    ||||||||||||||||||||||||||||||||   |||| ||||||||||||||||||    
T  10955017 gacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatag 10955074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 253 - 308
Target Start/End: Original strand, 20503530 - 20503585
Alignment:
Q  253 gacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcataga 308  Q
    ||||| |||| ||||| ||||||||||||||| |||||||||||||||||||||||    
T  20503530 gacacatgtctgacaccgggacacgcctaatccgaggagtgtccgtgcttcataga 20503585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 257 - 312
Target Start/End: Original strand, 25074864 - 25074919
Alignment:
Q  257 cgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatagaatat 312  Q
    |||||||||||||||||||| ||||||| ||||||||| |||||||||||| ||||    
T  25074864 cgtgtccgacactgggacacacctaatccgaggagtgttcgtgcttcatagcatat 25074919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 256 - 307
Target Start/End: Original strand, 40052380 - 40052431
Alignment:
Q  256 acgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    ||||||||||||| ||||||||||||||| ||||||||| ||||||||||||    
T  40052380 acgtgtccgacaccgggacacgcctaatccgaggagtgttcgtgcttcatag 40052431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 241 - 307
Target Start/End: Complemental strand, 40993346 - 40993275
Alignment:
Q  241 gtgtcggtgtcggacacg-----tgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    ||||||||||||||||||     |||||||||| ||||||||||||||| ||||||||||| ||||||||||    
T  40993346 gtgtcggtgtcggacacgacacatgtccgacaccgggacacgcctaatccgaggagtgtccatgcttcatag 40993275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 206 - 283
Target Start/End: Original strand, 14832123 - 14832205
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcg-----gacacgtgtccgacactgggacacgcctaat 283  Q
    |||||||| | | ||||||||||||||||| |||||||||||| |||     |||||||||||||||| ||||||||||||||    
T  14832123 tcacataactcaatgtaattacaagtgtcagtgtcgtgtcggtatcggacacgacacgtgtccgacaccgggacacgcctaat 14832205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 206 - 307
Target Start/End: Original strand, 28812539 - 28812645
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacacg-----tgtccgacactgggacacgcctaatcggaggagtgtccgtgc 300  Q
    |||||||||| |||||| |||||||||||  |||||||| |||||| ||||||     |||||||||   |||||||||||||| |||||||||| ||||    
T  28812539 tcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacgatacatgtccgacagcaggacacgcctaatccgaggagtgtctgtgc 28812638  T
Q  301 ttcatag 307  Q
     ||||||    
T  28812639 ctcatag 28812645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 206 - 308
Target Start/End: Original strand, 14829713 - 14829821
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacacgtg------tccgacactgggacacgcctaatcggaggagtgtccgtg 299  Q
    |||||||||| |  |||||||||||||||  |||||||||||||| ||||||| |      | |||||| ||||||||||||||| ||||| ||||||||    
T  14829713 tcacataattcatggtaattacaagtgtcggtgtcgtgtcggtgttggacacgagatgtggttcgacaccgggacacgcctaatctgaggaatgtccgtg 14829812  T
Q  300 cttcataga 308  Q
    |||| ||||    
T  14829813 cttcgtaga 14829821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 253 - 306
Target Start/End: Complemental strand, 16000004 - 15999951
Alignment:
Q  253 gacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcata 306  Q
    |||||||||||||||| |||||||||||||||  |||||||||||||| |||||    
T  16000004 gacacgtgtccgacaccgggacacgcctaatccaaggagtgtccgtgcatcata 15999951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 241 - 305
Target Start/End: Original strand, 25775557 - 25775624
Alignment:
Q  241 gtgtcggtgtcggacacgt---gtccgacactgggacacgcctaatcggaggagtgtccgtgcttcat 305  Q
    |||||||||||||||||||   |||||||||  |||||||||||||| ||||||||| ||||||||||    
T  25775557 gtgtcggtgtcggacacgtcgtgtccgacaccaggacacgcctaatccgaggagtgttcgtgcttcat 25775624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 258 - 302
Target Start/End: Original strand, 1509637 - 1509681
Alignment:
Q  258 gtgtccgacactgggacacgcctaatcggaggagtgtccgtgctt 302  Q
    ||||||||||| || ||||||||||||||||||||||||||||||    
T  1509637 gtgtccgacaccggtacacgcctaatcggaggagtgtccgtgctt 1509681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 253 - 309
Target Start/End: Original strand, 18427014 - 18427070
Alignment:
Q  253 gacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatagaa 309  Q
    |||||||||||| ||| ||||||| ||||||| |||||||||||||| |||||||||    
T  18427014 gacacgtgtccggcaccgggacacacctaatctgaggagtgtccgtgtttcatagaa 18427070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 206 - 257
Target Start/End: Original strand, 1509563 - 1509614
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacac 257  Q
    |||||||||||||||||||||||||||||  |||||| |||||||| |||||    
T  1509563 tcacataatttagtgtaattacaagtgtcggtgtcgtttcggtgtccgacac 1509614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 210 - 307
Target Start/End: Complemental strand, 15796325 - 15796223
Alignment:
Q  210 ataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcgg-----acacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttca 304  Q
    |||||| ||||||||||||| ||||  |||||||| ||||||||     |||||||||| |||| || ||||||||||||  | |||||| |||||||||    
T  15796325 ataattcagtgtaattacaattgtcggtgtcgtgtaggtgtcggacacaacacgtgtccaacaccggaacacgcctaatccaaagagtgttcgtgcttca 15796226  T
Q  305 tag 307  Q
    |||    
T  15796225 tag 15796223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 257 - 307
Target Start/End: Original strand, 21211363 - 21211413
Alignment:
Q  257 cgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    |||||||||||||||||||| ||||||| |||||||||  |||||||||||    
T  21211363 cgtgtccgacactgggacactcctaatccgaggagtgtttgtgcttcatag 21211413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 253 - 307
Target Start/End: Original strand, 35223003 - 35223057
Alignment:
Q  253 gacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    |||||||||| ||||| ||||||||| | ||| ||||||||||||||||||||||    
T  35223003 gacacgtgtctgacacggggacacgctttatccgaggagtgtccgtgcttcatag 35223057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 206 - 307
Target Start/End: Complemental strand, 49651821 - 49651716
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacacg-----tgtccgacactgggacacgcctaatcggaggagtgtccgtgc 300  Q
    |||||||||| | ||||||||||||||||  |||||||||||   ||||||||     | |||||||| ||||||| ||||||| ||| |||||||||||    
T  49651821 tcacataattcactgtaattacaagtgtcggtgtcgtgtcggac-cggacacgacacatatccgacaccgggacacacctaatccgagaagtgtccgtgc 49651723  T
Q  301 ttcatag 307  Q
    |||||||    
T  49651722 ttcatag 49651716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 206 - 307
Target Start/End: Original strand, 55212987 - 55213092
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcgg-----acacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgc 300  Q
    ||||||||||||||| |||||||||||||  ||| |||||||||||||     ||||||||||||||| | ||||||| |||||  || ||| |||||||    
T  55212987 tcacataatttagtgcaattacaagtgtcggtgt-gtgtcggtgtcgggcacaacacgtgtccgacaccgagacacgcataatccaagaagtatccgtgc 55213085  T
Q  301 ttcatag 307  Q
    | |||||    
T  55213086 tacatag 55213092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 258 - 307
Target Start/End: Complemental strand, 4466589 - 4466540
Alignment:
Q  258 gtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    |||||||||||||||||||| || ||  ||||||||||||||||||||||    
T  4466589 gtgtccgacactgggacacggcttattcgaggagtgtccgtgcttcatag 4466540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 271 - 307
Target Start/End: Complemental strand, 4990948 - 4990912
Alignment:
Q  271 ggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    |||||||||||||| ||||||||||||||||||||||    
T  4990948 ggacacgcctaatccgaggagtgtccgtgcttcatag 4990912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 254 - 306
Target Start/End: Complemental strand, 8789541 - 8789489
Alignment:
Q  254 acacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcata 306  Q
    |||| |||| ||||| | ||||||||||||| |||||||||||||||||||||    
T  8789541 acacatgtcggacaccgagacacgcctaatccgaggagtgtccgtgcttcata 8789489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 272 - 308
Target Start/End: Original strand, 8842413 - 8842449
Alignment:
Q  272 gacacgcctaatcggaggagtgtccgtgcttcataga 308  Q
    ||||||||||||| |||||||||||||||||||||||    
T  8842413 gacacgcctaatccgaggagtgtccgtgcttcataga 8842449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 256 - 308
Target Start/End: Original strand, 9800119 - 9800171
Alignment:
Q  256 acgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcataga 308  Q
    ||||||| |||||  ||||||||||||||||||| || |||||||||||||||    
T  9800119 acgtgtcggacacctggacacgcctaatcggaggcgtttccgtgcttcataga 9800171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 168 - 245
Target Start/End: Original strand, 14747548 - 14747625
Alignment:
Q  168 acactgatacaccgacacatctaataatttgnnnnnnntcacataatttagtgtaattacaagtgtcactgtcgtgtc 245  Q
    ||||||| || |||||||| |||||||||||       ||||||||||||||||||||||||| |||  |||||||||    
T  14747548 acactgacacgccgacacagctaataatttgaaaaaaatcacataatttagtgtaattacaagggtccgtgtcgtgtc 14747625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 271 - 311
Target Start/End: Original strand, 21861658 - 21861698
Alignment:
Q  271 ggacacgcctaatcggaggagtgtccgtgcttcatagaata 311  Q
    |||||| ||||||| ||||||||||||||||||||||||||    
T  21861658 ggacacacctaatccgaggagtgtccgtgcttcatagaata 21861698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 237 - 305
Target Start/End: Complemental strand, 24205051 - 24204983
Alignment:
Q  237 tgtcgtgtcggtgtcggacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcat 305  Q
    |||||||||||   | ||| ||||||||||||  |||||||||||||  ||||||||||||||||||||    
T  24205051 tgtcgtgtcggacactgacgcgtgtccgacaccaggacacgcctaattcgaggagtgtccgtgcttcat 24204983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 257 - 312
Target Start/End: Complemental strand, 3164021 - 3163966
Alignment:
Q  257 cgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatagaatat 312  Q
    |||||||||||| | ||||||||||||  ||||||||||| |||||||||| ||||    
T  3164021 cgtgtccgacaccgagacacgcctaattcgaggagtgtccatgcttcatagtatat 3163966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 253 - 308
Target Start/End: Complemental strand, 14223841 - 14223787
Alignment:
Q  253 gacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcataga 308  Q
    ||||||||||||||| |||||||||||||||| ||||||| || |||||| |||||    
T  14223841 gacacgtgtccgaca-tgggacacgcctaatctgaggagtttctgtgctttataga 14223787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 264 - 307
Target Start/End: Original strand, 14979225 - 14979268
Alignment:
Q  264 gacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    ||||| ||||||||||||| | ||||||||||||||||||||||    
T  14979225 gacaccgggacacgcctaacccgaggagtgtccgtgcttcatag 14979268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 308
Target Start/End: Original strand, 16789040 - 16789142
Alignment:
Q  210 ataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacacg-----tgtccgacactgggacacgcctaatcggaggagtgtccgtgcttca 304  Q
    |||||| |||||||||| ||||||   ||||||||| |||||||||| |     ||||| |||| ||||||| ||||||  |||||||||||||||||||    
T  16789040 ataattcagtgtaattataagtgttggtgtcgtgtcagtgtcggacatgacacatgtccaacac-gggacacacctaatttgaggagtgtccgtgcttca 16789138  T
Q  305 taga 308  Q
    ||||    
T  16789139 taga 16789142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 257 - 307
Target Start/End: Complemental strand, 2408640 - 2408590
Alignment:
Q  257 cgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    ||||| |||||| |||||||||||||||  |||||| ||||||||||||||    
T  2408640 cgtgttcgacaccgggacacgcctaatctaaggagtctccgtgcttcatag 2408590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 206 - 240
Target Start/End: Complemental strand, 10268521 - 10268487
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtc 240  Q
    |||||||||||||||||||||||||||||| ||||    
T  10268521 tcacataatttagtgtaattacaagtgtcagtgtc 10268487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 254 - 308
Target Start/End: Original strand, 11252042 - 11252096
Alignment:
Q  254 acacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcataga 308  Q
    ||||||||||| ||  || |||||||||||| |||||||||| ||||||||||||    
T  11252042 acacgtgtccggcatcggaacacgcctaatccgaggagtgtctgtgcttcataga 11252096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 259 - 309
Target Start/End: Original strand, 33359826 - 33359876
Alignment:
Q  259 tgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatagaa 309  Q
    |||||||||  |||||||| ||||| ||||||||||||||||||| |||||    
T  33359826 tgtccgacatcgggacacgtctaattggaggagtgtccgtgcttcgtagaa 33359876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 257 - 307
Target Start/End: Original strand, 52369856 - 52369906
Alignment:
Q  257 cgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    ||||||| |||| ||||||| |||| || ||||||||||||||||||||||    
T  52369856 cgtgtccaacaccgggacacacctattccgaggagtgtccgtgcttcatag 52369906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 253 - 306
Target Start/End: Original strand, 15864898 - 15864950
Alignment:
Q  253 gacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcata 306  Q
    |||||||||| ||||| |||||||||||||||  | ||||||||||||||||||    
T  15864898 gacacgtgtctgacac-gggacacgcctaatccaaagagtgtccgtgcttcata 15864950  T

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Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 253 - 306
Target Start/End: Complemental strand, 32804538 - 32804485
Alignment:
Q  253 gacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcata 306  Q
    ||||| |||||| |||||  | |||||||||| |||||||||||||||||||||    
T  32804538 gacacatgtccgccactgaaaaacgcctaatctgaggagtgtccgtgcttcata 32804485  T

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Target: scaffold0086 (Bit Score: 51; Significance: 8e-20; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 206 - 307
Target Start/End: Original strand, 2952 - 3058
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtc-----ggacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgc 300  Q
    |||||||||||||||||||||||||| ||| |||||||||||| ||      ||||||||| |||||| || |||||||||||| |||||||||||||||    
T  2952 tcacataatttagtgtaattacaagtatcagtgtcgtgtcggtatcagacacgacacgtgttcgacaccggaacacgcctaatccgaggagtgtccgtgc 3051  T
Q  301 ttcatag 307  Q
    | |||||    
T  3052 tccatag 3058  T

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Target: scaffold0450 (Bit Score: 48; Significance: 5e-18; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 206 - 308
Target Start/End: Complemental strand, 8670 - 8563
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacacg-----tgtccgacactgggacacgcctaatcggaggagtgtccgtgc 300  Q
    ||||||||||  || ||||||||| ||||  |||||||||||| |||||||||     ||||||||||||| |||||||||||  |||||||||||||||    
T  8670 tcacataattcggtataattacaaatgtcggtgtcgtgtcggtatcggacacgatacgtgtccgacactggtacacgcctaattcgaggagtgtccgtgc 8571  T
Q  301 ttcataga 308  Q
    ||||||||    
T  8570 ttcataga 8563  T

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Target: scaffold0057 (Bit Score: 48; Significance: 5e-18; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 209 - 307
Target Start/End: Original strand, 24052 - 24155
Alignment:
Q  209 cataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacac-------gtgtccgacactgggacacgcctaatcggaggagtgtccgtgct 301  Q
    |||||||||||||||||||| || ||| |||||||||||||||||||||       |||||||||||||| |||||||||||| || |||||||||||||    
T  24052 cataatttagtgtaattaca-gtttcagtgtcgtgtcggtgtcggacacaacacgtgtgtccgacactgg-acacgcctaatccgatgagtgtccgtgct 24149  T
Q  302 tcatag 307  Q
    ||||||    
T  24150 tcatag 24155  T

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Target: scaffold0793 (Bit Score: 46; Significance: 7e-17; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 253 - 314
Target Start/End: Complemental strand, 4875 - 4814
Alignment:
Q  253 gacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatagaatatta 314  Q
    ||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||    
T  4875 gacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatagattatta 4814  T

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Target: scaffold0380 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 253 - 307
Target Start/End: Original strand, 8666 - 8720
Alignment:
Q  253 gacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    ||||||||||||||||||||| ||||||||||  |||||||||||||||||||||    
T  8666 gacacgtgtccgacactgggatacgcctaatccaaggagtgtccgtgcttcatag 8720  T

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Target: scaffold0171 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 206 - 307
Target Start/End: Original strand, 23535 - 23641
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcggacac-----gtgtccgacactgggacacgcctaatcggaggagtgtccgtgc 300  Q
    |||||||||| |||||||||| |||||||| |||||| ||||||||||||||     |||||||| |||||||||||| |||||  || |||||  ||||    
T  23535 tcacataattcagtgtaattataagtgtcagtgtcgtttcggtgtcggacacgatatgtgtccgagactgggacacgcataatcccagaagtgtttgtgc 23634  T
Q  301 ttcatag 307  Q
    |||||||    
T  23635 ttcatag 23641  T

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Target: scaffold0361 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 253 - 310
Target Start/End: Original strand, 14592 - 14649
Alignment:
Q  253 gacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatagaat 310  Q
    |||||||||||||||| | |||||||||||||| |||||||| |||||||||||||||    
T  14592 gacacgtgtccgacaccgagacacgcctaatcgaaggagtgtacgtgcttcatagaat 14649  T

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Target: scaffold0475 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 264 - 312
Target Start/End: Original strand, 3384 - 3432
Alignment:
Q  264 gacactgggacacgcctaatcggaggagtgtccgtgcttcatagaatat 312  Q
    ||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  3384 gacactgggacacgcctaatccgaggagtgtccgtgcttcataggatat 3432  T

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Target: scaffold0053 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 253 - 308
Target Start/End: Original strand, 8863 - 8918
Alignment:
Q  253 gacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcataga 308  Q
    |||||||||||||||| | ||||||||||||| ||||||| |||||||||||||||    
T  8863 gacacgtgtccgacaccgagacacgcctaatctgaggagtctccgtgcttcataga 8918  T

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Target: scaffold0008 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 207 - 305
Target Start/End: Complemental strand, 263406 - 263303
Alignment:
Q  207 cacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtc-----ggacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgct 301  Q
    ||||||||| |||||||||| |||||||| |||||||||||||||      ||||||||| ||| ||   ||||||||||||| |||||||||||||| |    
T  263406 cacataattcagtgtaattataagtgtcagtgtcgtgtcggtgtcagacacgacacgtgttcgataccaagacacgcctaatccgaggagtgtccgtggt 263307  T
Q  302 tcat 305  Q
    ||||    
T  263306 tcat 263303  T

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Target: scaffold0652 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 241 - 306
Target Start/End: Complemental strand, 473 - 403
Alignment:
Q  241 gtgtcggtgtcggacacg-----tgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcata 306  Q
    ||||||||||||||||||     |||||||||| ||||||| ||||||| |||||||||||||||||||||    
T  473 gtgtcggtgtcggacacgacgcgtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 403  T

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Target: scaffold0223 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 206 - 249
Target Start/End: Original strand, 20196 - 20239
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtg 249  Q
    |||||||||| ||||||||||||||||||| |||||||||||||    
T  20196 tcacataattcagtgtaattacaagtgtcagtgtcgtgtcggtg 20239  T

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Target: scaffold0123 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 206 - 308
Target Start/End: Complemental strand, 44560 - 44453
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcgg-----acacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgc 300  Q
    |||||||||| |||||||||| | |||||  | |||||||||||| ||     |||||||||||||||||||||| |  ||||| ||| |||||| ||||    
T  44560 tcacataattcagtgtaattatatgtgtcggtatcgtgtcggtgttggacacaacacgtgtccgacactgggacatggttaatctgagaagtgtctgtgc 44461  T
Q  301 ttcataga 308  Q
    ||||||||    
T  44460 ttcataga 44453  T

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Target: scaffold0044 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 206 - 300
Target Start/End: Original strand, 53204 - 53303
Alignment:
Q  206 tcacataatttagtgtaattacaagtgtcactgtcgtgtcggtgtcg-----gacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgc 300  Q
    |||||||||| |||||||||| |||||||  || |||||||||||||     |||||||||||||||| ||||||||  |||||  || |||||||||||    
T  53204 tcacataattcagtgtaattataagtgtcggtgccgtgtcggtgtcggacatgacacgtgtccgacaccgggacacgtttaatccaagaagtgtccgtgc 53303  T

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Target: scaffold0512 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 253 - 307
Target Start/End: Complemental strand, 5030 - 4976
Alignment:
Q  253 gacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    ||||||||||||||| || |||| |||||||| |||||||||| |||||||||||    
T  5030 gacacgtgtccgacattgagacatgcctaatccgaggagtgtctgtgcttcatag 4976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 208 - 306
Target Start/End: Original strand, 92833 - 92940
Alignment:
Q  208 acataatttagtgtaattacaagtgtcactgtcgtgtcggtg----tcggacacg-----tgtccgacactgggacacgcctaatcggaggagtgtccgt 298  Q
    |||||||| ||||||||||||||||||| | | |||| ||||    |||||||||     |||| |||||  |||||||||||||| |||||||||||||    
T  92833 acataattcagtgtaattacaagtgtcagttttgtgttggtgggtgtcggacacgacacatgtcggacacctggacacgcctaatccgaggagtgtccgt 92932  T
Q  299 gcttcata 306  Q
    ||||||||    
T  92933 gcttcata 92940  T

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Target: scaffold0027 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 272 - 307
Target Start/End: Original strand, 46741 - 46776
Alignment:
Q  272 gacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    ||||||||||||| ||||||||||||||||||||||    
T  46741 gacacgcctaatccgaggagtgtccgtgcttcatag 46776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 257 - 311
Target Start/End: Original strand, 51892 - 51946
Alignment:
Q  257 cgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatagaata 311  Q
    ||||||| |||| ||||||||||||||| ||||| ||||| ||||||||| ||||    
T  51892 cgtgtccaacaccgggacacgcctaatccgaggaatgtccatgcttcataaaata 51946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 253 - 307
Target Start/End: Complemental strand, 3032 - 2978
Alignment:
Q  253 gacacgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    ||||| ||||||||||||  |||||||||||  | ||||||||||||||||||||    
T  3032 gacacatgtccgacactgaaacacgcctaatatggggagtgtccgtgcttcatag 2978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 257 - 307
Target Start/End: Complemental strand, 135313 - 135263
Alignment:
Q  257 cgtgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 307  Q
    ||||||||||||  |||||||||||||| |||| |||| ||||||||||||    
T  135313 cgtgtccgacaccaggacacgcctaatctgaggcgtgttcgtgcttcatag 135263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 259 - 308
Target Start/End: Complemental strand, 17590 - 17541
Alignment:
Q  259 tgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcataga 308  Q
    |||||||||| ||||||||||||||| |  |||| |||||||||||||||    
T  17590 tgtccgacaccgggacacgcctaatcagctgagtttccgtgcttcataga 17541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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