View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5218_low_1 (Length: 819)

Name: NF5218_low_1
Description: NF5218
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5218_low_1
NF5218_low_1
[»] chr4 (16 HSPs)
chr4 (317-800)||(38412159-38412637)
chr4 (11-310)||(38411744-38412043)
chr4 (124-306)||(55606235-55606416)
chr4 (128-306)||(28146982-28147159)
chr4 (125-306)||(25967999-25968179)
chr4 (629-756)||(38422420-38422550)
chr4 (133-306)||(13198078-13198250)
chr4 (224-306)||(11440588-11440670)
chr4 (75-201)||(11440668-11440797)
chr4 (413-485)||(38407541-38407613)
chr4 (315-385)||(25967801-25967872)
chr4 (523-615)||(38422270-38422357)
chr4 (504-562)||(38407632-38407688)
chr4 (315-385)||(28146787-28146858)
chr4 (124-167)||(29866160-29866203)
chr4 (171-271)||(46308387-46308487)
[»] chr7 (11 HSPs)
chr7 (125-311)||(25635893-25636079)
chr7 (120-305)||(39653441-39653626)
chr7 (121-306)||(47363689-47363874)
chr7 (198-306)||(10493472-10493579)
chr7 (142-201)||(10493376-10493435)
chr7 (120-306)||(33049115-33049311)
chr7 (125-210)||(7493053-7493138)
chr7 (315-382)||(47363963-47364030)
chr7 (213-278)||(45435419-45435484)
chr7 (142-235)||(31742958-31743052)
chr7 (126-224)||(45435503-45435603)
[»] chr2 (9 HSPs)
chr2 (124-306)||(37794640-37794821)
chr2 (125-306)||(17988977-17989157)
chr2 (46-243)||(5430210-5430407)
chr2 (126-216)||(19263821-19263911)
chr2 (128-200)||(35016316-35016388)
chr2 (211-296)||(35016457-35016541)
chr2 (247-305)||(5428641-5428699)
chr2 (253-305)||(19263772-19263824)
chr2 (124-166)||(20929880-20929922)
[»] chr3 (4 HSPs)
chr3 (125-306)||(11783396-11783577)
chr3 (145-306)||(7299106-7299267)
chr3 (317-386)||(7298925-7298994)
chr3 (142-179)||(53527191-53527228)
[»] chr1 (12 HSPs)
chr1 (125-279)||(12990541-12990694)
chr1 (119-305)||(34664779-34664964)
chr1 (125-311)||(32617560-32617744)
chr1 (125-306)||(9457617-9457794)
chr1 (125-306)||(9461714-9461891)
chr1 (131-306)||(14081707-14081872)
chr1 (315-386)||(32617859-32617931)
chr1 (315-385)||(9457446-9457517)
chr1 (315-385)||(9461543-9461614)
chr1 (315-384)||(12990144-12990214)
chr1 (227-306)||(24699887-24699966)
chr1 (123-160)||(963102-963139)
[»] chr8 (8 HSPs)
chr8 (128-306)||(23489962-23490139)
chr8 (125-214)||(13402173-13402262)
chr8 (120-201)||(13396888-13396969)
chr8 (128-306)||(7154249-7154439)
chr8 (132-183)||(14370805-14370856)
chr8 (248-306)||(14867365-14867423)
chr8 (328-385)||(14867560-14867618)
chr8 (318-383)||(23490243-23490309)
[»] chr5 (11 HSPs)
chr5 (131-304)||(41283493-41283664)
chr5 (132-306)||(39426087-39426260)
chr5 (132-306)||(22927061-22927236)
chr5 (125-306)||(36491494-36491666)
chr5 (132-306)||(13424636-13424806)
chr5 (319-385)||(13424887-13424954)
chr5 (315-385)||(19967312-19967383)
chr5 (247-306)||(16341523-16341584)
chr5 (42-164)||(19967627-19967749)
chr5 (124-167)||(37247652-37247695)
chr5 (315-385)||(41283294-41283365)
[»] chr6 (7 HSPs)
chr6 (137-306)||(9177588-9177760)
chr6 (126-245)||(26660607-26660726)
chr6 (126-245)||(26766578-26766697)
chr6 (224-306)||(32296363-32296445)
chr6 (213-289)||(10117185-10117259)
chr6 (315-385)||(8169240-8169310)
chr6 (120-167)||(9771928-9771975)
[»] scaffold0989 (1 HSPs)
scaffold0989 (337-383)||(2119-2165)


Alignment Details
Target: chr4 (Bit Score: 391; Significance: 0; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 391; E-Value: 0
Query Start/End: Original strand, 317 - 800
Target Start/End: Original strand, 38412159 - 38412637
Alignment:
Q  317 cggtaacgtcggctacctatactttttgtcgccgcctttttctcggtaatggaccattttttaaaacctctaagactagtatcaacgatatagtagagca 416  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38412159 cggtaacgtcggctacctatactttttgtcgccgcctttttctcggtaatggaccattttttaaaacctctaagactagtatcaacgatatagtagagca 38412258  T
Q  417 aactaaatgtgattcacaaatcagcattaatctttcggtggatatcgccattaaaaaatatctttcaataannnnnnnnnnnnnnnnaatcttgaagaat 516  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||                |||||||||| ||    
T  38412259 aactaaatgtgattcacaaatcagcattaatctttcggtggatatcgccattaaaaaagatctttcaataattttatttttttt---aatcttgaagcat 38412355  T
Q  517 taatcatttcaaacaaaaatgtttgcaatgaacactcacttgggacaatgttgtattgagtaagatctactaatgtcaatggttggtatgattgtggata 616  Q
    ||||| ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||    
T  38412356 taatc-tttcaaacaaaaatgtttgcaatgaacactcacttgg-acaatgttgtcttgagtaagatctactaatgtcaatggttggaatgattgtagata 38412453  T
Q  617 ttggttggttaatatgataattgtcatgtgttttatatcacataatggatattttgttgcttcacataacaaatgttaaactctttcaatggaaaatatc 716  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38412454 ttggttggttaatatgataattgtcatgtgttttatatcacataatggatattttgttgcttcacataacaaatgttaaactctttcaatggaaaatatc 38412553  T
Q  717 attttcaagtttgttatatatcaagaattgtcctcgttgttacagtctagtagttttgtatgaagacattttatatcgtgtttc 800  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38412554 attttcaagtttgtcatatatcaagaattgtcctcgttgttacagtctagtagttttgtatgaagacattttatatcgtgtttc 38412637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 11 - 310
Target Start/End: Original strand, 38411744 - 38412043
Alignment:
Q  11 acatcatcacaaaaacatttttagcagccgaaaggttttaaacaacggtcgcggtcaaggtccaggtcgtgtatatgatttcaccatttcggccgttaca 110  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||    
T  38411744 acatcatcacaaaaatatttttagcagccgaaaggttttaaacaacggtcgcgttcaaggtccaggtcatgtatatgatttcaccatttcggctgttaca 38411843  T
Q  111 tatattgtattatagattgcggttgtcgcgctgtgaattaatcacaacattgcacaacttttaaataatgataggaatgtaaataacttaacctagagat 210  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  38411844 gatattgtattatagattgcggttgtcgcgctgtgaattaatcacaacattgcacaacttttaaacaatgataggaatgtaaataacttaacctagagat 38411943  T
Q  211 agatttgaagttctaaactagataaggaaataacagtatgtaatttataatcaagtatgtagtaaaaatatgattttcatctatcttaattgaaaagata 310  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38411944 agatttggagttctaaactagataaggaaataacattatgtaatttataatcaagtatgtagtaaaaatatgattttcatctatcttaattgaaaagata 38412043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 124 - 306
Target Start/End: Original strand, 55606235 - 55606416
Alignment:
Q  124 agattgcggttgtcgcgctgtgaattaatcacaacattgcacaacttttaaataatgataggaatgtaaataacttaacctagagatagatttgaagttc 223  Q
    ||||| ||||||||||  |||||||||||||||||||||||||||| |||||||||||||| ||  |||||||||||| ||||||| ||||||| |||||    
T  55606235 agattacggttgtcgcattgtgaattaatcacaacattgcacaactcttaaataatgatagtaacttaaataacttaaactagagaaagatttggagttc 55606334  T
Q  224 taaactagataaggaaataacagtatgtaatttataatcaagtatgtagtaaaaatatgattttcatctatcttaattgaaaa 306  Q
    ||||||| |||||||||||||  |||||||||||| ||||| |||||| ||||||||| |||||||||||| | |||||||||    
T  55606335 taaactatataaggaaataac-ttatgtaatttatgatcaaatatgtactaaaaatataattttcatctatatcaattgaaaa 55606416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 128 - 306
Target Start/End: Complemental strand, 28147159 - 28146982
Alignment:
Q  128 tgcggttgtcgcgctgtgaattaatcacaacattgcacaacttttaaataatgataggaatgtaaataacttaacctagagatagatttgaagttctaaa 227  Q
    ||||||||||||| |||||||||||||||||||||||||||| |||||||||  ||  ||  |||||||||||| |||| || ||||||| | |||||||    
T  28147159 tgcggttgtcgcggtgtgaattaatcacaacattgcacaactcttaaataatattatcaacttaaataacttaaactagggaaagatttggaattctaaa 28147060  T
Q  228 ctagataaggaaataacagtatgtaatttataatcaagtatgtagtaaaaatatgattttcatctatcttaattgaaaa 306  Q
     |||||||||| |||||  |||||||||||| ||||| |||||| |||||||||||||||||||||||| |||||||||    
T  28147059 ttagataaggagataact-tatgtaatttatgatcaaatatgtactaaaaatatgattttcatctatctcaattgaaaa 28146982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 125 - 306
Target Start/End: Complemental strand, 25968179 - 25967999
Alignment:
Q  125 gattgcggttgtcgcgctgtgaattaatcacaacattgcacaacttttaaataatgataggaatgtaaataacttaacctagagatagatttgaagttct 224  Q
    |||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||  |  || ||||||||| ||||||| |||| ||| |||||    
T  25968179 gattgcggttgtcgcggtgtgaattaatcacaacattgcacaactcttaaataatgatagtcacttacataacttaaactagagaaagatctgacgttct 25968080  T
Q  225 aaactagataaggaaataacagtatgtaatttataatcaagtatgtagtaaaaatatgattttcatctatcttaattgaaaa 306  Q
    |||||||||||| | |||||  |||||||||||| ||||| ||||||  |||||||||||| |||||||| | |||||||||    
T  25968079 aaactagataagaagataac-ttatgtaatttattatcaaatatgtaccaaaaatatgattatcatctatatcaattgaaaa 25967999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 629 - 756
Target Start/End: Original strand, 38422420 - 38422550
Alignment:
Q  629 tatgataattgtcatgtgttttatatcacataatggatattttgttgcttcacataacaaatgtt-aaactctttcaatggaaaatatcattttcaagtt 727  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||||| |||||||||||| | ||| |||||||||||||||    
T  38422420 tatgataattgtcatgtgttttatttgacataatggatattttgttgcttcacatgacaaatgttaaaactctttcaaggtaaagtatcattttcaagtt 38422519  T
Q  728 tgt--tatatatcaagaattgtcctcgttgt 756  Q
    |||  |||||||||||||||||||| |||||    
T  38422520 tgttatatatatcaagaattgtccttgttgt 38422550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 133 - 306
Target Start/End: Original strand, 13198078 - 13198250
Alignment:
Q  133 ttgtcgcgctgtgaattaatcacaacattgcacaacttttaaataatgataggaatgtaaataacttaacctagagatagatttgaagttctaaactaga 232  Q
    |||||||| |||||||||||||||||||||||||||| ||||| |||||| | ||  |  ||||||||| ||||| | ||||||| ||||||||| ||||    
T  13198078 ttgtcgcggtgtgaattaatcacaacattgcacaactcttaaacaatgatcgtaactttgataacttaaactagacaaagatttggagttctaaattaga 13198177  T
Q  233 taaggaaataacagtatgtaatttataatcaagtatgtagtaaaaatatgattttcatctatcttaattgaaaa 306  Q
    |||||| |||||  |||||||||||| ||||| |||| | ||| |||||||||||||| ||||| |||||||||    
T  13198178 taaggagataac-ttatgtaatttatgatcaaatatgcactaagaatatgattttcatgtatctcaattgaaaa 13198250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 224 - 306
Target Start/End: Complemental strand, 11440670 - 11440588
Alignment:
Q  224 taaactagataaggaaataacagtatgtaatttataatcaagtatgtagtaaaaatatgattttcatctatcttaattgaaaa 306  Q
    ||||||| ||||| | |||||| |||||||||||| ||||| |||||| ||||||||||||||||||||||||||||||||||    
T  11440670 taaactatataagaagataacattatgtaatttatgatcaaatatgtactaaaaatatgattttcatctatcttaattgaaaa 11440588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 75 - 201
Target Start/End: Complemental strand, 11440797 - 11440668
Alignment:
Q  75 ggtcgtgtatatgatttcaccatttcggccgttacatatattgtattatagattgcggttgtcgcgctgtgaattaatcacaacattgcacaactttta- 173  Q
    ||||||| |||||||||||| |||||||| |||||  || |||  |||| |||||  ||||||||| |||||||||||||||||||||  ||||| |||     
T  11440797 ggtcgtggatatgatttcacgatttcggctgttacgaatgttgcgttatggattgttgttgtcgcggtgtgaattaatcacaacattgttcaactcttaa 11440698  T
Q  174 --aataatgataggaatgtaaataacttaa 201  Q
      ||||||||||| ||||||||||||||||    
T  11440697 ataataatgatagtaatgtaaataacttaa 11440668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 413 - 485
Target Start/End: Original strand, 38407541 - 38407613
Alignment:
Q  413 agcaaactaaatgtgattcacaaatcagcattaatctttcggtggatatcgccattaaaaaatatctttcaat 485  Q
    |||||||  |||||||||||||||| |||||||||||||| |||||||| |||||||||||| ||||||||||    
T  38407541 agcaaacccaatgtgattcacaaattagcattaatctttctgtggatattgccattaaaaaaaatctttcaat 38407613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 315 - 385
Target Start/End: Complemental strand, 25967872 - 25967801
Alignment:
Q  315 aacggtaacgtcggctacctatac-tttttgtcgccgcctttttctcggtaatggaccattttttaaaacct 385  Q
    |||||||||||| ||||||||||| |||||||||| ||||| |||||||||| ||||||| |||||||||||    
T  25967872 aacggtaacgtccgctacctatacctttttgtcgcagccttattctcggtaacggaccatattttaaaacct 25967801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 523 - 615
Target Start/End: Original strand, 38422270 - 38422357
Alignment:
Q  523 tttcaaacaaaaatgtttgcaatgaacactcacttgggacaatgttgtattgagtaagatctactaatgtcaatggttggtatgattgtggat 615  Q
    ||||||||| |||||||| ||| ||||  ||||||| ||||||||||| || |||||||||| |||||   ||||||||||||||||||||||    
T  38422270 tttcaaacagaaatgtttacaaggaac--tcacttgagacaatgttgtcttcagtaagatctgctaat---aatggttggtatgattgtggat 38422357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 504 - 562
Target Start/End: Original strand, 38407632 - 38407688
Alignment:
Q  504 aatcttgaagaattaatcatttcaaacaaaaatgtttgcaatgaacactcacttgggac 562  Q
    |||||||||| ||||||| |||||||||||||||||| ||||||  |||||||||||||    
T  38407632 aatcttgaagcattaatcttttcaaacaaaaatgtttacaatga--actcacttgggac 38407688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 315 - 385
Target Start/End: Complemental strand, 28146858 - 28146787
Alignment:
Q  315 aacggtaacgtcggctacctatac-tttttgtcgccgcctttttctcggtaatggaccattttttaaaacct 385  Q
    |||||||| ||| ||||||||||| ||||||| || ||||||||||| ||||  |||| |||||||||||||    
T  28146858 aacggtaatgtccgctacctatacctttttgttgcggcctttttctccgtaacagaccgttttttaaaacct 28146787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 167
Target Start/End: Complemental strand, 29866203 - 29866160
Alignment:
Q  124 agattgcggttgtcgcgctgtgaattaatcacaacattgcacaa 167  Q
    |||||| |||||||| | ||||||||||||||||||||||||||    
T  29866203 agattgtggttgtcgtggtgtgaattaatcacaacattgcacaa 29866160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 271
Target Start/End: Original strand, 46308387 - 46308487
Alignment:
Q  171 ttaaataatgataggaatgtaaataacttaacct-agagatagatttgaagttctaaactagataaggaaataacagtatgtaatttataatcaagtatg 269  Q
    |||||||||||||| ||  ||||||||||||  | ||||| ||||||  ||||||||||||  |||||| |||||  |||||||||||| ||||| ||||    
T  46308387 ttaaataatgatagtaacttaaataacttaaattgagagagagatttagagttctaaactaactaaggagataac-ttatgtaatttatgatcaaatatg 46308485  T
Q  270 ta 271  Q
    ||    
T  46308486 ta 46308487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 107; Significance: 3e-53; HSPs: 11)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 125 - 311
Target Start/End: Original strand, 25635893 - 25636079
Alignment:
Q  125 gattgcggttgtcgcgctgtgaattaatcacaacattgcacaacttttaaataatgataggaatgtaaataacttaacctagagatagatttgaagttct 224  Q
    |||||||||||| ||| ||||||||||||||||||||||||| || |||||||||||||  |||||||||||||||| ||| ||||||||||| ||||||    
T  25635893 gattgcggttgttgcggtgtgaattaatcacaacattgcacacctcttaaataatgataataatgtaaataacttaaactaaagatagatttggagttct 25635992  T
Q  225 aaactagataaggaaataacagtatgtaatttataatcaagtatgtagtaaaaatatgattttcatctatcttaattgaaaagatac 311  Q
    |||||||| ||||| |||||| |||||||||||| || || |||||| |||| ||||||||||||||||| | ||||||||| ||||    
T  25635993 aaactagacaaggagataacattatgtaatttatgattaaatatgtactaaagatatgattttcatctatttcaattgaaaaaatac 25636079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 120 - 305
Target Start/End: Original strand, 39653441 - 39653626
Alignment:
Q  120 ttatagattgcggttgtcgcgctgtgaattaatcacaacattgcacaacttttaaataatgataggaatgtaaataacttaacctagagatagatttgaa 219  Q
    |||| ||||| |||||| ||| |||||||||||||||| ||| ||||||| |||||||||||||| || ||||||||||||| ||||| ||| | ||| |    
T  39653441 ttatggattgtggttgttgcggtgtgaattaatcacaatattccacaactcttaaataatgatagcaacgtaaataacttaaactagatataaagttgga 39653540  T
Q  220 gttctaaactagataaggaaataacagtatgtaatttataatcaagtatgtagtaaaaatatgattttcatctatcttaattgaaa 305  Q
    |||||||||||||||| || |||||| |||||||||||| ||||| |||||| |||||||||||| ||||||||| | ||||||||    
T  39653541 gttctaaactagataaagagataacattatgtaatttatgatcaaatatgtactaaaaatatgatgttcatctatttcaattgaaa 39653626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 121 - 306
Target Start/End: Original strand, 47363689 - 47363874
Alignment:
Q  121 tatagattgcggttgtcgcgctgtgaattaatcacaacattgcacaacttttaaataatgataggaatgtaaataacttaacctagagatagatttgaag 220  Q
    |||| ||||||||||||  | ||||||||||||| |||||||||||| | |||||||||||||  ||  |||||||||||| ||||||| ||||||||||    
T  47363689 tataaattgcggttgtcttggtgtgaattaatcaaaacattgcacaagtcttaaataatgataataacttaaataacttaaactagagaaagatttgaag 47363788  T
Q  221 ttctaaactagataaggaaataacagtatgtaatttataatcaagtatgtagtaaaaatatgattttcatct-atcttaattgaaaa 306  Q
    |||||||||||||||||| |||||  |||||||| ||| ||||| |||||| |||||||||| ||||||||| |||| |||||||||    
T  47363789 ttctaaactagataaggagataac-ttatgtaatctatgatcaaatatgtactaaaaatatgcttttcatctaatctcaattgaaaa 47363874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 198 - 306
Target Start/End: Original strand, 10493472 - 10493579
Alignment:
Q  198 ttaacctagagatagatttgaagttctaaactagataaggaaataacagtatgtaatttataatcaagtatgtagtaaaaatatgattttcatctatctt 297  Q
    |||| |||||||| |||||| || ||||||||| ||||||| |||||| |||||||||||| ||||| |||| | ||||||||||| ||||||| ||||     
T  10493472 ttaaactagagatggatttggaggtctaaactatataaggagataacattatgtaatttatgatcaaatatgcattaaaaatatga-tttcatccatctc 10493570  T
Q  298 aattgaaaa 306  Q
    |||||||||    
T  10493571 aattgaaaa 10493579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 142 - 201
Target Start/End: Original strand, 10493376 - 10493435
Alignment:
Q  142 tgtgaattaatcacaacattgcacaacttttaaataatgataggaatgtaaataacttaa 201  Q
    |||||||||||||||||||||||||||| |||||||||||||| || |||||||||||||    
T  10493376 tgtgaattaatcacaacattgcacaactcttaaataatgatagtaacgtaaataacttaa 10493435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 120 - 306
Target Start/End: Complemental strand, 33049311 - 33049115
Alignment:
Q  120 ttatagattgcggttgtcgcgctgtgaattaatcacaacattgcacaacttttaaataatg-ataggaatgtaaataacttaacctagagatagatttga 218  Q
    |||| ||||| ||| |||| | ||||||||||||| |||||||||||||| |||||||||| |||  ||  |||||||||| |  |||||||||||||||    
T  33049311 ttatggattgtggtcgtcgaggtgtgaattaatcaaaacattgcacaactcttaaataatgtataataacttaaataacttgaaatagagatagatttga 33049212  T
Q  219 agttctaaactagat----------aaggaaataacagtatgtaatttataatcaagtatgtagtaaaaatatgattttcatctatcttaattgaaaa 306  Q
    |||| ||||||||||          ||||| |||||  | ||||||||||  |||| |||||| ||||||| ||||||||||| |||| |||||||||    
T  33049211 agtt-taaactagataaagagcataaaggagataaccttctgtaatttatgttcaaatatgtactaaaaatgtgattttcatccatctcaattgaaaa 33049115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 125 - 210
Target Start/End: Original strand, 7493053 - 7493138
Alignment:
Q  125 gattgcggttgtcgcgctgtgaattaatcacaacattgcacaacttttaaataatgataggaatgtaaataacttaacctagagat 210  Q
    ||||| |||| || || |||||||||||||||||||| ||||||| |||||||||||||| || |||||||| |||| ||||||||    
T  7493053 gattgtggttatcacggtgtgaattaatcacaacattacacaactcttaaataatgatagtaacgtaaataatttaaactagagat 7493138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 315 - 382
Target Start/End: Original strand, 47363963 - 47364030
Alignment:
Q  315 aacggtaacgtcggctacctatactttttgtcgccgcctttttctcggtaatggaccattttttaaaa 382  Q
    |||||||||||| |||||||||||||||||| |  |||||||||||||||| ||||| ||||||||||    
T  47363963 aacggtaacgtccgctacctatactttttgtggtggcctttttctcggtaacggaccgttttttaaaa 47364030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 213 - 278
Target Start/End: Complemental strand, 45435484 - 45435419
Alignment:
Q  213 atttgaagttctaaactagataaggaaataacagtatgtaatttataatcaagtatgtagtaaaaa 278  Q
    ||||||||||||||||||||||| || |||||| |||||||||||| ||||| |||||| ||||||    
T  45435484 atttgaagttctaaactagataaagagataacattatgtaatttatgatcaaatatgtactaaaaa 45435419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 235
Target Start/End: Complemental strand, 31743052 - 31742958
Alignment:
Q  142 tgtgaattaatcacaacattgcacaacttttaaataatg-ataggaatgtaaataacttaacctagagatagatttgaagttctaaactagataa 235  Q
    |||||||||||||||||||||||||  | |||||||||| |||  ||  ||||||||||||  ||||||||||||||||||| | || |||||||    
T  31743052 tgtgaattaatcacaacattgcacagttcttaaataatgtataataacttaaataacttaaattagagatagatttgaagttttgaagtagataa 31742958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 224
Target Start/End: Complemental strand, 45435603 - 45435503
Alignment:
Q  126 attgcggttgtcgcgctgtgaattaatcacaacattgcacaacttttaaataatgataggaatgtaa--ataacttaacctagagatagatttgaagttc 223  Q
    ||||| ||| ||||| ||||||||||| |||| ||||||||||| ||||||||| |||| |||| ||  |||||||||  | |||||| |||||||||||    
T  45435603 attgcagttatcgcggtgtgaattaataacaatattgcacaactcttaaataataatagtaatggaaatataacttaaattggagataaatttgaagttc 45435504  T
Q  224 t 224  Q
    |    
T  45435503 t 45435503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 99; Significance: 2e-48; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 124 - 306
Target Start/End: Original strand, 37794640 - 37794821
Alignment:
Q  124 agattgcggttgtcgcgctgtgaattaatcacaacattgcacaacttttaaataatgataggaatgtaaataacttaacctagagatagatttgaagttc 223  Q
    ||||||||||||||| | |||||||||||||||||||||||||||| |||||||||||||| ||  || ||||||||  | ||||| ||||||| |||||    
T  37794640 agattgcggttgtcgtggtgtgaattaatcacaacattgcacaactcttaaataatgatagtaacttagataacttagaccagagaaagatttggagttc 37794739  T
Q  224 taaactagataaggaaataacagtatgtaatttataatcaagtatgtagtaaaaatatgattttcatctatcttaattgaaaa 306  Q
    ||||||||||||||| |||||  |||||||||||| ||||| |||||| |||||||||||||||| ||||||| |||||||||    
T  37794740 taaactagataaggagataac-ttatgtaatttatgatcaaatatgtactaaaaatatgattttcttctatctcaattgaaaa 37794821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 125 - 306
Target Start/End: Original strand, 17988977 - 17989157
Alignment:
Q  125 gattgcggttgtcgcgctgtgaattaatcacaacattgcacaacttttaaataatgataggaatgtaaataacttaacctagagatagatttgaagttct 224  Q
    |||||||||||||| | |||||||||||||||| ||||||||||| |||||||||||||| ||  |||||||||||| ||||| | ||||||| ||||||    
T  17988977 gattgcggttgtcgaggtgtgaattaatcacaatattgcacaactcttaaataatgatagtaacttaaataacttaaactagaaaaagatttggagttct 17989076  T
Q  225 aaactagataaggaaataacagtatgtaatttataatcaagtatgtagtaaaaatatgattttcatctatcttaattgaaaa 306  Q
    |||||||||||||| |||| | ||| |||||||| ||||| |||||| ||||||||||||||||||| |||| |||||||||    
T  17989077 aaactagataaggagataa-attatataatttatgatcaaatatgtactaaaaatatgattttcatcgatctcaattgaaaa 17989157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 46 - 243
Target Start/End: Complemental strand, 5430407 - 5430210
Alignment:
Q  46 ttttaaacaacggtcgcggtcaaggtccaggtcgtgtatatgatttcaccatttcggccgttacatatattgtattatagattgcggttgtcgcgctgtg 145  Q
    ||||||| || |||||||  ||| |||  ||||| ||||||||||| || |||||||  |||||  || ||| |||| |||||| |||||||||| ||||    
T  5430407 ttttaaataatggtcgcgaacaatgtcgcggtcgcgtatatgattttacgatttcggttgttacggatgttgcattacagattgtggttgtcgcggtgtg 5430308  T
Q  146 aattaatcacaacattgcacaacttttaaataatgataggaatgtaaataacttaacctagagatagatttgaagttctaaactagataaggaaataa 243  Q
    |||||||||||| ||||||||||| |||||||||||||| ||  |||||||||||| ||||||||||| ||| | ||||||| |||||||||| ||||    
T  5430307 aattaatcacaatattgcacaactcttaaataatgatagtaacataaataacttaaactagagatagagttggatttctaaagtagataaggagataa 5430210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 126 - 216
Target Start/End: Complemental strand, 19263911 - 19263821
Alignment:
Q  126 attgcggttgtcgcgctgtgaattaatcacaacattgcacaacttttaaataatgataggaatgtaaataacttaacctagagatagattt 216  Q
    ||||||||||| |||||||||||||||||||||||||||||| | |||||||||||||| ||  |||||||||||  ||||||||||||||    
T  19263911 attgcggttgttgcgctgtgaattaatcacaacattgcacaattcttaaataatgatagtaacataaataacttatactagagatagattt 19263821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 128 - 200
Target Start/End: Original strand, 35016316 - 35016388
Alignment:
Q  128 tgcggttgtcgcgctgtgaattaatcacaacattgcacaacttttaaataatgataggaatgtaaataactta 200  Q
    ||||||||||||| |||||||||||||||||||| ||||||| |||||||||||||| ||  |||||||||||    
T  35016316 tgcggttgtcgcggtgtgaattaatcacaacattacacaactcttaaataatgatagtaacttaaataactta 35016388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 211 - 296
Target Start/End: Original strand, 35016457 - 35016541
Alignment:
Q  211 agatttgaagttctaaactagataaggaaataacagtatgtaatttataatcaagtatgtagtaaaaatatgattttcatctatct 296  Q
    ||||||| | |||||||||||||||||| |||||  ||| |||||||| ||||| ||||||  |||||||||||||||||||||||    
T  35016457 agatttggaattctaaactagataaggagataact-tatataatttatgatcaaatatgtatcaaaaatatgattttcatctatct 35016541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 247 - 305
Target Start/End: Complemental strand, 5428699 - 5428641
Alignment:
Q  247 tatgtaatttataatcaagtatgtagtaaaaatatgattttcatctatcttaattgaaa 305  Q
    |||||||||||| ||||| |||||| ||| |||||||||||||||||||| ||||||||    
T  5428699 tatgtaatttatgatcaattatgtactaataatatgattttcatctatctcaattgaaa 5428641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 253 - 305
Target Start/End: Complemental strand, 19263824 - 19263772
Alignment:
Q  253 atttataatcaagtatgtagtaaaaatatgattttcatctatcttaattgaaa 305  Q
    |||||| ||||| |||||| |||||||||||||||||||||||| ||||||||    
T  19263824 atttatgatcaaatatgtattaaaaatatgattttcatctatctcaattgaaa 19263772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 124 - 166
Target Start/End: Complemental strand, 20929922 - 20929880
Alignment:
Q  124 agattgcggttgtcgcgctgtgaattaatcacaacattgcaca 166  Q
    |||| |||||||||||| |||||||||||||||||| ||||||    
T  20929922 agatcgcggttgtcgcggtgtgaattaatcacaacaatgcaca 20929880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 94; Significance: 2e-45; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 125 - 306
Target Start/End: Original strand, 11783396 - 11783577
Alignment:
Q  125 gattgcggttgtcgcgctgtgaattaatcacaacattgcacaacttttaaataatgataggaatgtaaataacttaacctagagatagatttgaagttct 224  Q
    ||||| |||||||||  |||||| |||| |||||||||||||||| |||||||||||||| ||  |||| ||||||| | ||||||||||||| ||||||    
T  11783396 gattgtggttgtcgctttgtgaagtaattacaacattgcacaactcttaaataatgatagtaacataaagaacttaaacaagagatagatttggagttct 11783495  T
Q  225 aaactagataaggaaataacagtatgtaatttataatcaagtatgtagtaaaaatatgattttcatctatcttaattgaaaa 306  Q
    |||||||| ||||| | |||| | |||||||||| ||||| |||||| |||||||||||||||||||||||| |||||||||    
T  11783496 aaactagacaaggagacaacattgtgtaatttatgatcaaatatgtactaaaaatatgattttcatctatctcaattgaaaa 11783577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 145 - 306
Target Start/End: Complemental strand, 7299267 - 7299106
Alignment:
Q  145 gaattaatcacaacattgcacaacttttaaataatgataggaatgtaaataacttaacctagagatagatttgaagttctaaactagataaggaaataac 244  Q
    ||||||| |||||||||| |||||| |||||||| ||||| || ||||||||||||| ||||||||||||||||| ||||||| |||||||||| |||||    
T  7299267 gaattaaccacaacattgtacaactcttaaataacgatagtaacgtaaataacttaaactagagatagatttgaa-ttctaaagtagataaggagataac 7299169  T
Q  245 agtatgtaatttataatcaagtatgtagtaaaaatatgattttcatc-tatcttaattgaaaa 306  Q
    | |||||||||||| || || |||||| | |||||||| |||||||| ||||| |||||||||    
T  7299168 attatgtaatttatgattaaatatgtacttaaaatatggttttcatcgtatctcaattgaaaa 7299106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 317 - 386
Target Start/End: Complemental strand, 7298994 - 7298925
Alignment:
Q  317 cggtaacgtcggctacctatactttttgtcgccgcctttttctcggtaatggaccattttttaaaacctc 386  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||| ||||| ||||||||||||||    
T  7298994 cggtaacgtcggctaccgatactttttgtcgcggcctttttctcggtaacggaccgttttttaaaacctc 7298925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 142 - 179
Target Start/End: Complemental strand, 53527228 - 53527191
Alignment:
Q  142 tgtgaattaatcacaacattgcacaacttttaaataat 179  Q
    ||||||||||||||||||||||||||||||||||||||    
T  53527228 tgtgaattaatcacaacattgcacaacttttaaataat 53527191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 91; Significance: 1e-43; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 125 - 279
Target Start/End: Complemental strand, 12990694 - 12990541
Alignment:
Q  125 gattgcggttgtcgcgctgtgaattaatcacaacattgcacaacttttaaataatgataggaatgtaaataacttaacctagagatagatttgaagttct 224  Q
    |||||| ||||||||| ||||||||| |||||||||||||||||| |||||||||||||| ||  |||||||||||| ||||||| ||||||||||||||    
T  12990694 gattgcagttgtcgcggtgtgaattagtcacaacattgcacaactcttaaataatgatagtaacttaaataacttaaactagagaaagatttgaagttct 12990595  T
Q  225 aaactagataaggaaataacagtatgtaatttataatcaagtatgtagtaaaaat 279  Q
    |||||||||||||| |||| | |||||||||||| ||||| |||||| |||||||    
T  12990594 aaactagataaggagataa-attatgtaatttatgatcaaatatgtattaaaaat 12990541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 119 - 305
Target Start/End: Complemental strand, 34664964 - 34664779
Alignment:
Q  119 attatagattgcggttgtcgcgctgtgaattaatcacaacattgcacaacttttaaataatgataggaatgtaaataacttaacctagagatagatttga 218  Q
    ||||| ||||| ||||||| || | ||||||||| ||||||||||||||||||||||||||||||| || ||||||||||||| ||| ||| |||| ||     
T  34664964 attatggattgtggttgtcacggtatgaattaattacaacattgcacaacttttaaataatgatagtaacgtaaataacttaaactatagacagatatgg 34664865  T
Q  219 agttctaaactagataaggaaataacagtatgtaatttataatcaagtatgtagtaaaaatatgattttcatctatcttaattgaaa 305  Q
    |||||||||||||||||| | |||||  |||||||||||| ||||| || ||| | |||||||||||||||||||||| ||||||||    
T  34664864 agttctaaactagataagaagataacgttatgtaatttatgatcaaatacgtact-aaaatatgattttcatctatctcaattgaaa 34664779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 125 - 311
Target Start/End: Original strand, 32617560 - 32617744
Alignment:
Q  125 gattgcggttgtcgcgctgtgaattaatcacaacattgcacaacttttaaataatgataggaatgtaaataacttaacctagagatagatttgaagttct 224  Q
    |||||||||||||||| ||| |||||||||||||||||||||||| |||||||| ||||| ||  | |||||||||| ||||||| |  |||  |||| |    
T  32617560 gattgcggttgtcgcggtgtaaattaatcacaacattgcacaactcttaaataacgatagtaacttgaataacttaaactagagaaatctttagagtt-t 32617658  T
Q  225 aaactagataaggaaataacagtatgtaatttataatcaagtatgtagtaaaaatatgattttcatctatcttaattgaaaagatac 311  Q
    |||||||||||||| |||||  |||||||||||| ||||| |||||| |||||||||||||||||||||||| ||||||||| ||||    
T  32617659 aaactagataaggagataac-ttatgtaatttatgatcaaatatgtactaaaaatatgattttcatctatctcaattgaaaaaatac 32617744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 125 - 306
Target Start/End: Complemental strand, 9457794 - 9457617
Alignment:
Q  125 gattgcggttgtcgcgctgtgaattaatcacaacattgcacaacttttaaataatgataggaatgtaaataacttaacctagagatagatttgaagttct 224  Q
    |||||||||||| ||| |||||||||||||||||||||||||||| |||||||||||||| ||  |||||||||||| |||||   ||||||  ||||||    
T  9457794 gattgcggttgttgcggtgtgaattaatcacaacattgcacaactcttaaataatgatagtaacttaaataacttaaactaga---agattttgagttct 9457698  T
Q  225 aaactagataaggaaataacagtatgtaatttataatcaagtatgtagtaaaaatatgattttcatctatcttaattgaaaa 306  Q
    |||| || |||||| |||||  |  ||||||||| ||||  ||||||  |||||||||||||| |||||||| |||||||||    
T  9457697 aaacaaggtaaggagataac-ttgagtaatttatgatcagatatgtatcaaaaatatgatttttatctatctcaattgaaaa 9457617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 125 - 306
Target Start/End: Complemental strand, 9461891 - 9461714
Alignment:
Q  125 gattgcggttgtcgcgctgtgaattaatcacaacattgcacaacttttaaataatgataggaatgtaaataacttaacctagagatagatttgaagttct 224  Q
    |||||||||||| ||| |||||||||||||||||||||||||||| |||||||||||||| ||  |||||||||||| |||||   ||||||  ||||||    
T  9461891 gattgcggttgttgcggtgtgaattaatcacaacattgcacaactcttaaataatgatagtaacttaaataacttaaactaga---agattttgagttct 9461795  T
Q  225 aaactagataaggaaataacagtatgtaatttataatcaagtatgtagtaaaaatatgattttcatctatcttaattgaaaa 306  Q
    |||| || |||||| |||||  |  ||||||||| ||||  ||||||  |||||||||||||| |||||||| |||||||||    
T  9461794 aaacaaggtaaggagataac-ttgagtaatttatgatcagatatgtatcaaaaatatgatttttatctatctcaattgaaaa 9461714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 131 - 306
Target Start/End: Original strand, 14081707 - 14081872
Alignment:
Q  131 ggttgtcgcgctgtgaattaatcacaacattgcacaacttttaaataatgataggaatgtaaataacttaacctagagatagatttgaagttctaaacta 230  Q
    |||||||||  |||| |||||||||||||||||| |||||||||||||||  || ||  |||||||||||| |||||||||||||     ||||||| ||    
T  14081707 ggttgtcgcagtgtgcattaatcacaacattgcataacttttaaataatg--agcaacttaaataacttaaactagagatagatt-----ttctaaatta 14081799  T
Q  231 gataaggaaataacagt-atgtaatttataatcaagtatgtagtaaaaatatgattttcatctatcttaattgaaaa 306  Q
    ||||| || |||||| | ||||||||    ||||| ||| || ||||||| |||||||||||||||| |||||||||    
T  14081800 gataatgagataacattaatgtaatt----atcaaatatatactaaaaatttgattttcatctatctcaattgaaaa 14081872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 315 - 386
Target Start/End: Original strand, 32617859 - 32617931
Alignment:
Q  315 aacggtaacgtcggctacctatac-tttttgtcgccgcctttttctcggtaatggaccattttttaaaacctc 386  Q
    |||||||||||| ||||||||||| ||||||| || ||||||||||||||||  |||| ||||||||||||||    
T  32617859 aacggtaacgtccgctacctatacctttttgtggcggcctttttctcggtaaccgaccgttttttaaaacctc 32617931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 315 - 385
Target Start/End: Complemental strand, 9457517 - 9457446
Alignment:
Q  315 aacggtaacgtcggctacctatac-tttttgtcgccgcctttttctcggtaatggaccattttttaaaacct 385  Q
    ||||| |||||| ||| ||||||| |||||||||| ||||||| |||||||| | |||||||||||||||||    
T  9457517 aacggcaacgtccgctgcctatacctttttgtcgcggccttttactcggtaacgaaccattttttaaaacct 9457446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 315 - 385
Target Start/End: Complemental strand, 9461614 - 9461543
Alignment:
Q  315 aacggtaacgtcggctacctatac-tttttgtcgccgcctttttctcggtaatggaccattttttaaaacct 385  Q
    ||||| |||||| ||| ||||||| |||||||||| ||||||| |||||||| | |||||||||||||||||    
T  9461614 aacggcaacgtccgctgcctatacctttttgtcgcggccttttactcggtaacgaaccattttttaaaacct 9461543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 315 - 384
Target Start/End: Complemental strand, 12990214 - 12990144
Alignment:
Q  315 aacggtaacgtcggctacctatac-tttttgtcgccgcctttttctcggtaatggaccattttttaaaacc 384  Q
    ||||||||||||  |||||||||| ||||| |||| |||||||||||||||| | ||| ||||||||||||    
T  12990214 aacggtaacgtccactacctatacctttttatcgcagcctttttctcggtaacgaaccgttttttaaaacc 12990144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 227 - 306
Target Start/End: Original strand, 24699887 - 24699966
Alignment:
Q  227 actagataaggaaataacagtatgtaatttataatcaagtatgtagtaaaaatatgattttcatctatcttaattgaaaa 306  Q
    |||||||||  | |||||| |||||||| ||| ||||| ||| ||  |||||||| |||||||||||||| |||||||||    
T  24699887 actagataaaaagataacattatgtaatatattatcaaatatatacgaaaaatataattttcatctatctcaattgaaaa 24699966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 160
Target Start/End: Complemental strand, 963139 - 963102
Alignment:
Q  123 tagattgcggttgtcgcgctgtgaattaatcacaacat 160  Q
    |||||||||||||||| | |||||||||||||||||||    
T  963139 tagattgcggttgtcgtggtgtgaattaatcacaacat 963102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 87; Significance: 3e-41; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 128 - 306
Target Start/End: Original strand, 23489962 - 23490139
Alignment:
Q  128 tgcggttgtcgcgctgtgaattaatcacaacattgcacaacttttaaataatgataggaatgtaaataacttaacctagagatagatttgaagttctaaa 227  Q
    ||||||||| ||| ||||||||||||||||||||| |||||| ||||||| |||||| ||  || | ||| ||| ||||||| ||||||| |||||||||    
T  23489962 tgcggttgttgcggtgtgaattaatcacaacattgtacaactcttaaatactgatagtaacttagacaacataaactagagaaagatttggagttctaaa 23490061  T
Q  228 ctagataaggaaataacagtatgtaatttataatcaagtatgtagtaaaaatatgattttcatctatcttaattgaaaa 306  Q
    ||||||||||| |||||  |||||||||||| ||||| ||||||  ||||||||||||||||||||||| |||||||||    
T  23490062 ctagataaggagataac-ttatgtaatttatgatcaaatatgtacgaaaaatatgattttcatctatctcaattgaaaa 23490139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 125 - 214
Target Start/End: Complemental strand, 13402262 - 13402173
Alignment:
Q  125 gattgcggttgtcgcgctgtgaattaatcacaacattgcacaacttttaaataatgataggaatgtaaataacttaacctagagatagat 214  Q
    |||||||||||||||| |||||||||||||||||||| ||||||| |||||||||||||| || ||||||||||||| ||| | ||||||    
T  13402262 gattgcggttgtcgcggtgtgaattaatcacaacattacacaactcttaaataatgatagtaaggtaaataacttaaactaaaaatagat 13402173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 13396969 - 13396888
Alignment:
Q  120 ttatagattgcggttgtcgcgctgtgaattaatcacaacattgcacaacttttaaataatgataggaatgtaaataacttaa 201  Q
    |||| |||||||| ||||||| |||||||||||||||||||| ||||||| |||||||||||||| || |||||||||||||    
T  13396969 ttatggattgcggctgtcgcggtgtgaattaatcacaacattacacaactcttaaataatgatagtaaggtaaataacttaa 13396888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 128 - 306
Target Start/End: Original strand, 7154249 - 7154439
Alignment:
Q  128 tgcggttgtcgcgctgtgaattaatcacaacattgcacaa--ctt----------ttaaataatgataggaatgtaaataacttaacctagagatagatt 215  Q
    ||||||||||| | ||||||||||||||||||||||||||  |||          |||||||||||||  |  ||||||||||||| | | |||||||||    
T  7154249 tgcggttgtcgtgatgtgaattaatcacaacattgcacaagtcttaaataaagtcttaaataatgataataccgtaaataacttaaaccatagatagatt 7154348  T
Q  216 tgaagttctaaactagataaggaaataacagtatgtaatttataatcaagtatgtagtaaaaatatgattttcatctatcttaattgaaaa 306  Q
    |  |||||| ||  ||||||||| |||  | |||||||| ||| ||||| |||||| ||||||||||||||||||||||||| ||| ||||    
T  7154349 ttgagttctgaatcagataaggagatataattatgtaatatatgatcaaatatgtattaaaaatatgattttcatctatcttcatttaaaa 7154439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 183
Target Start/End: Complemental strand, 14370856 - 14370805
Alignment:
Q  132 gttgtcgcgctgtgaattaatcacaacattgcacaacttttaaataatgata 183  Q
    ||||||| | |||||||||||||||||||||||||||| |||  ||||||||    
T  14370856 gttgtcgtggtgtgaattaatcacaacattgcacaactcttacttaatgata 14370805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 248 - 306
Target Start/End: Original strand, 14867365 - 14867423
Alignment:
Q  248 atgtaatttataatcaagtatgtagtaaaaatatgattttcatctatcttaattgaaaa 306  Q
    |||||||||||  |||| |||||| ||||||| ||||||||||| |||| |||||||||    
T  14867365 atgtaatttatgttcaaatatgtactaaaaatgtgattttcatccatctcaattgaaaa 14867423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 328 - 385
Target Start/End: Original strand, 14867560 - 14867618
Alignment:
Q  328 gctacctata-ctttttgtcgccgcctttttctcggtaatggaccattttttaaaacct 385  Q
    |||||||||| |||| |||||| ||||||||||| |||| ||||| |||||||||||||    
T  14867560 gctacctatatctttctgtcgcggcctttttctcagtaacggaccgttttttaaaacct 14867618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 318 - 383
Target Start/End: Original strand, 23490243 - 23490309
Alignment:
Q  318 ggtaacgtcggctacctatac-tttttgtcgccgcctttttctcggtaatggaccattttttaaaac 383  Q
    |||||| |||||||||||||| |||||||||| ||||||||||| |||| ||||  || ||||||||    
T  23490243 ggtaacttcggctacctatacctttttgtcgcggcctttttctcagtaacggacggttctttaaaac 23490309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 82; Significance: 3e-38; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 131 - 304
Target Start/End: Complemental strand, 41283664 - 41283493
Alignment:
Q  131 ggttgtcgcgctgtgaattaatcacaacattgcacaacttttaaataatgataggaatgtaaataacttaacctagagatagatttgaagttctaaacta 230  Q
    |||||||| | ||||||||||||||||||||||||||||||| ||||| ||||| ||  |||||||||||| ||||||| ||||||||||||||||||||    
T  41283664 ggttgtcgtggtgtgaattaatcacaacattgcacaacttttgaataaagatagtaacataaataacttaaactagagaaagatttgaagttctaaacta 41283565  T
Q  231 gataaggaaataacagtatgtaatttataatcaagtatgtagtaaaaatatgattttcatctatcttaattgaa 304  Q
    |||||||| |||||  ||| |||||||| ||||  | |||| |||||||  ||||||||||||||| |||||||    
T  41283564 gataaggagataac-ttat-taatttatgatcagatttgtactaaaaatgggattttcatctatctcaattgaa 41283493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 132 - 306
Target Start/End: Original strand, 39426087 - 39426260
Alignment:
Q  132 gttgtcgcgctgtgaattaatcacaacattgcacaacttttaaataatgataggaatgtaaataacttaacctagagatagatttgaagttctaaactag 231  Q
    ||||||||| ||||||||||| ||||||||||||||||  || ||| |||||| ||||||||||||||||  || ||||| ||||| | ||||||||||     
T  39426087 gttgtcgcggtgtgaattaattacaacattgcacaactcatacatattgatagtaatgtaaataacttaa-atatagatatatttgga-ttctaaactat 39426184  T
Q  232 ataaggaaataacagtatgtaatttataatcaagtatgtagtaaaa-atatgattttcatctatcttaattgaaaa 306  Q
    ||||||| || ||| |||||||||||| ||||| |||||| ||||| |||||||||||||||||||||||||||||    
T  39426185 ataaggagatgacattatgtaatttatgatcaaatatgtactaaaatatatgattttcatctatcttaattgaaaa 39426260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 132 - 306
Target Start/End: Original strand, 22927061 - 22927236
Alignment:
Q  132 gttgtcgcgctgtgaattaatcacaacattgcacaacttttaaataatgataggaatgtaaataacttaacctagagatagatttgaagttctaaactag 231  Q
    |||||||||  ||||||||||||||||||||| ||||| ||||||||||| || ||  |||||||||||| ||||||||||||| || ||||||||||||    
T  22927061 gttgtcgcgacgtgaattaatcacaacattgcccaactcttaaataatgaaagtaacataaataacttaaactagagatagattcgaggttctaaactag 22927160  T
Q  232 ataaggaaataacagtatgtaatttataatcaa--gtatgtagtaaaaatatgattttcatctatcttaattgaaaa 306  Q
    | || || |||||| ||||| |||||| |||||  || ||||  ||||||||||||||||||||||| |||||||||    
T  22927161 acaatgagataaca-tatgtgatttatgatcaaatgtgtgtacaaaaaatatgattttcatctatctcaattgaaaa 22927236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 125 - 306
Target Start/End: Complemental strand, 36491666 - 36491494
Alignment:
Q  125 gattgcggttgtcgcgctgtgaattaatcacaacattgcacaacttttaaataatgataggaatgtaaataacttaacctagagatagatttgaagttct 224  Q
    |||| |||||||| || ||||||||||||| ||||||||| || | |||||| ||||||| || ||||||||| ||| ||||||||||||||  ||||||    
T  36491666 gattacggttgtcacggtgtgaattaatcataacattgcaaaattcttaaatgatgatagtaaagtaaataacataaactagagatagattttgagttct 36491567  T
Q  225 aaactagataaggaaataacagtatgtaatttataatcaagtatgtagtaaaaatatgattttcatctatcttaattgaaaa 306  Q
    ||||||||| |||||  ||||         |||| || || |||||| ||||||||||||||||||||||||||||||||||    
T  36491566 aaactagatgaggaaccaaca---------ttatgattaaatatgtactaaaaatatgattttcatctatcttaattgaaaa 36491494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 132 - 306
Target Start/End: Original strand, 13424636 - 13424806
Alignment:
Q  132 gttgtcgcgctgtgaattaatcacaacattgcacaacttttaaataatgataggaatgtaaataacttaacctagagatagatttgaagttctaaactag 231  Q
    ||||||| | |||||||||||||||||||||||||||| |||||||||||    ||  ||||||||||||  |||||| ||||||  | ||||||| |||    
T  13424636 gttgtcgtggtgtgaattaatcacaacattgcacaactcttaaataatga----aacttaaataacttaaaatagagaaagatttagaattctaaaatag 13424731  T
Q  232 a-taaggaaataacagtatgtaatttataatcaagtatgtagtaaaaatatgattttcatctatcttaattgaaaa 306  Q
    | |||||| |||||  || || |||||| ||||| |||||| ||||||||| |||||||| ||| | |||||||||    
T  13424732 attaaggagataac-ttacgtgatttatgatcaaatatgtactaaaaatattattttcatttatttcaattgaaaa 13424806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 319 - 385
Target Start/End: Original strand, 13424887 - 13424954
Alignment:
Q  319 gtaacgtcggctacctatac-tttttgtcgccgcctttttctcggtaatggaccattttttaaaacct 385  Q
    ||||| |||||||||||||| ||||| |||| | |||||||||||||||||||||| |||||||||||    
T  13424887 gtaacatcggctacctatacctttttttcgcggtctttttctcggtaatggaccatattttaaaacct 13424954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 315 - 385
Target Start/End: Complemental strand, 19967383 - 19967312
Alignment:
Q  315 aacggtaacgtcggctacctatac-tttttgtcgccgcctttttctcggtaatggaccattttttaaaacct 385  Q
    ||||||||| |||||||||| ||| |||||| ||  |||||||||||||||||||||  |||||||||||||    
T  19967383 aacggtaacttcggctacctgtacctttttgccgtggcctttttctcggtaatggactgttttttaaaacct 19967312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 247 - 306
Target Start/End: Original strand, 16341523 - 16341584
Alignment:
Q  247 tatgtaatttata--atcaagtatgtagtaaaaatatgattttcatctatcttaattgaaaa 306  Q
    |||||||||||||  ||||| |||||| |||||||||| ||||||||||||| |||||||||    
T  16341523 tatgtaatttatatgatcaaatatgtactaaaaatatgtttttcatctatctcaattgaaaa 16341584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 164
Target Start/End: Complemental strand, 19967749 - 19967627
Alignment:
Q  42 aaggttttaaacaacggtcgcggtcaaggtccaggtcgtgtatatgatttcaccatttcggccgttacatatattgtattatagattgcggttgtcgcgc 141  Q
    ||||||||||| ||||||||| ||||||||| |||| | | ||| |||||| | |||||||||||||    | ||| |  |  |||||||||||||||      
T  19967749 aaggttttaaataacggtcgcagtcaaggtcgaggttgcggataggatttcgcgatttcggccgttatgggtgttgcaacactgattgcggttgtcgcag 19967650  T
Q  142 tgtgaattaatcacaacattgca 164  Q
    || ||||||||||||||||||||    
T  19967649 tgagaattaatcacaacattgca 19967627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 167
Target Start/End: Complemental strand, 37247695 - 37247652
Alignment:
Q  124 agattgcggttgtcgcgctgtgaattaatcacaacattgcacaa 167  Q
    |||||| |||||||||| |||||||||||||||||| |||||||    
T  37247695 agattgtggttgtcgcggtgtgaattaatcacaacaatgcacaa 37247652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 315 - 385
Target Start/End: Complemental strand, 41283365 - 41283294
Alignment:
Q  315 aacggtaacgtcggctacctatact-ttttgtcgccgcctttttctcggtaatggaccattttttaaaacct 385  Q
    |||||||||||| |||||||||||| ||||||| |  |||||||||  |||| ||||| |||||||||||||    
T  41283365 aacggtaacgtccgctacctatacttttttgtcacgacctttttcttagtaacggaccgttttttaaaacct 41283294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 75; Significance: 4e-34; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 137 - 306
Target Start/End: Complemental strand, 9177760 - 9177588
Alignment:
Q  137 cgcgctgtgaattaatcacaacattgcacaacttttaaataatgataggaatgtaaataacttaacctagagatagatttgaagttctaaactagataag 236  Q
    |||| |||||||||||||||||||||||||||| || ||||||||||| || ||||||||||||| ||| ||||||||||| ||||||||||||| |       
T  9177760 cgcggtgtgaattaatcacaacattgcacaactcttgaataatgatagtaacgtaaataacttaaactaaagatagatttggagttctaaactaggt--- 9177664  T
Q  237 gaaataacagtatgtaatttat------aatcaagtatgtagtaaaaatatgattttcatctatcttaattgaaaa 306  Q
    || |||||| ||||||||||||      | |||| |||||| ||||||||||||||||||| |||| |||||||||    
T  9177663 gagataacattatgtaatttatgatcaaattcaaatatgtactaaaaatatgattttcatcaatctcaattgaaaa 9177588  T

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Target: chr6; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 126 - 245
Target Start/End: Original strand, 26660607 - 26660726
Alignment:
Q  126 attgcggttgtcgcgctgtgaattaatcacaacattgcacaacttttaaataatgataggaatgtaaataacttaacctagagatagatttgaagttcta 225  Q
    |||||||||||| || |||||||||||||||||||||||||||| |||||| |  |||| ||  ||||||| |||| ||| ||| ||||||| |||||||    
T  26660607 attgcggttgtcacggtgtgaattaatcacaacattgcacaactcttaaatcacaatagtaacttaaataatttaaactaaagaaagatttggagttcta 26660706  T
Q  226 aactagataaggaaataaca 245  Q
    ||||| | ||||| ||||||    
T  26660707 aactatacaaggagataaca 26660726  T

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Target: chr6; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 126 - 245
Target Start/End: Original strand, 26766578 - 26766697
Alignment:
Q  126 attgcggttgtcgcgctgtgaattaatcacaacattgcacaacttttaaataatgataggaatgtaaataacttaacctagagatagatttgaagttcta 225  Q
    |||||||||||| || |||||||||||||||||||||||||||| |||||| |  |||| ||  ||||||| |||| ||| ||| ||||||| |||||||    
T  26766578 attgcggttgtcacggtgtgaattaatcacaacattgcacaactcttaaatcacaatagtaacttaaataatttaaactaaagaaagatttggagttcta 26766677  T
Q  226 aactagataaggaaataaca 245  Q
    ||||| | ||||| ||||||    
T  26766678 aactatacaaggagataaca 26766697  T

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Target: chr6; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 224 - 306
Target Start/End: Complemental strand, 32296445 - 32296363
Alignment:
Q  224 taaactagataaggaaataacagtatgtaatttataatcaagtatgtagtaaaaatatgattttcatctatcttaattgaaaa 306  Q
    ||||||| ||||||| ||| || ||||||| |||| ||||| |||||| |||||||||||||||||||||||| |||||||||    
T  32296445 taaactatataaggagataccattatgtaacttatgatcaaatatgtactaaaaatatgattttcatctatctcaattgaaaa 32296363  T

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Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 213 - 289
Target Start/End: Complemental strand, 10117259 - 10117185
Alignment:
Q  213 atttgaagttctaaactagataaggaaataacagtatgtaatttataatcaagtatgtagtaaaaatatgattttca 289  Q
    ||||| |||||||||||||||||||| || |   |||||||||||| ||||| |||||| |||||||||||||||||    
T  10117259 atttggagttctaaactagataaggagattat--tatgtaatttatgatcaaatatgtactaaaaatatgattttca 10117185  T

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Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 315 - 385
Target Start/End: Original strand, 8169240 - 8169310
Alignment:
Q  315 aacggtaacgtcggctacctatactttttgtcgccgcctttttctcggtaatggaccattttttaaaacct 385  Q
    ||||||||||||| |||||||||| ||||||||   ||||||||||||||| || |  |||||||||||||    
T  8169240 aacggtaacgtcgactacctataccttttgtcgtgacctttttctcggtaacgggcagttttttaaaacct 8169310  T

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Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 167
Target Start/End: Complemental strand, 9771975 - 9771928
Alignment:
Q  120 ttatagattgcggttgtcgcgctgtgaattaatcacaacattgcacaa 167  Q
    |||| ||||| ||| |||||| ||||||||||||||||||||||||||    
T  9771975 ttatggattgtggtcgtcgcgttgtgaattaatcacaacattgcacaa 9771928  T

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Target: scaffold0989 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0989
Description:

Target: scaffold0989; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 337 - 383
Target Start/End: Original strand, 2119 - 2165
Alignment:
Q  337 actttttgtcgccgcctttttctcggtaatggaccattttttaaaac 383  Q
    |||||||||||| ||||||||||||||||  |||| |||||||||||    
T  2119 actttttgtcgcggcctttttctcggtaacagaccgttttttaaaac 2165  T

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