View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5220-Insertion-9 (Length: 344)
Name: NF5220-Insertion-9
Description: NF5220
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5220-Insertion-9 |
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Alignment Details
Target: chr3 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 6 - 255
Target Start/End: Complemental strand, 38721491 - 38721242
Alignment:
| Q |
6 |
caccaatcattaccaattgtttcttatgtggcaaccctttaccacattttgtatgttttttcacacatgcaccacacaacactactcttctagctaactc |
105 |
Q |
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| T |
38721491 |
caccaatcattaccaattgtttcttatgtggcaaccctttaccacattttgtatgttttttcacacatgcaccacgcaacactactcttctagctaactc |
38721392 |
T |
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| Q |
106 |
atctagtatcacacgctctgcatcatttcctttgttattttctcttgcaagtaaaagtgctgtttcattcctctcatttttaacatcacattttgctcca |
205 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38721391 |
atctagtatcacacgctctgcatcatttcctttgttattttctcttgcaagtaaaagtgctgtttcattcctctcatttttaacatcacattttgctcca |
38721292 |
T |
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| Q |
206 |
taagatatcaaaatctcacacatttctccattactttctcttgctgctaa |
255 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38721291 |
taagatatcaaaatctcacacatttctccattactttctcttgctgctaa |
38721242 |
T |
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