View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF5224-Insertion-2 (Length: 1011)
Name: NF5224-Insertion-2
Description: NF5224
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5224-Insertion-2 |
 |  |
|
| [»] scaffold0279 (1 HSPs) |
 |  |  |
|
| [»] scaffold0001 (1 HSPs) |
 |  |  |
|
| [»] scaffold0024 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr4 (Bit Score: 428; Significance: 0; HSPs: 6)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 428; E-Value: 0
Query Start/End: Original strand, 188 - 688
Target Start/End: Complemental strand, 9977475 - 9976976
Alignment:
| Q |
188 |
tttttgtgcatggcatttatttcctgcaaatttctggcggctttcaagacttttcaatttaatttttccaatttcatgcagatttctctgaggattttaa |
287 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9977475 |
tttttgtgcatggcatttatttcctgcaaatttctggcggctttcaagacttttcaatttaatttttccaatttcatgcagatttctctgaggattttaa |
9977376 |
T |
 |
| Q |
288 |
tattttaatcacaatcttactttacgtaaatattttttcaatggcaaatgaaatgacgtgcttctaggttcctnnnnnnngtagggcattttcatacata |
387 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||||| |
|
|
| T |
9977375 |
tatattaatcacaatcttactttacgtaaatattttttcaatggcaaatgaaatgacgtgcttctaggttc-taaaaaaagtagagcattttcatacata |
9977277 |
T |
 |
| Q |
388 |
tttttcaatggagggttagttttgtatatatcttttaaaagtgggttgttttagaaaagaaactctcaaacaacaaacaaaacttattccattaagtggg |
487 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9977276 |
tttttcaatggagggttagttttgtatatatcttttaaaagtgggttgttttagaaaagaaactctcaaacaacaaacaaaacttattccattaagtggg |
9977177 |
T |
 |
| Q |
488 |
gcggttacatggattaaattatggcgccgtagtgttctatcacaaatcatatttagattattcttcactgttttcaagtggcgatgcatcgacccttact |
587 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||||||| || |
|
|
| T |
9977176 |
gcggttacatggattaaattatggcgccgtagtgttctatcataaatcatatttagattatttttcactgtttccaagtggcgatgcatcgacccttgct |
9977077 |
T |
 |
| Q |
588 |
catttgacattgtactcgagctgtatagtgtgttgcttctaggcaacgacctaccattcacgctattttgtatttgatcaatgtcatagtgttttcagta |
687 |
Q |
| |
|
||||||| | |||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
9977076 |
catttgaaactgtactcgagctgtatagcgtgttgcttctaggcaacgacctaccattcacactattttgtatttgatcaatgtcatagtgttttcggta |
9976977 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 177; E-Value: 7e-95
Query Start/End: Original strand, 700 - 895
Target Start/End: Complemental strand, 9973886 - 9973690
Alignment:
| Q |
700 |
tgatttggttgcaattattcttcaattctccaccaaatttgctcattcatcttaattgttggacaaacgaggtgagcgtaaaaaagcttagacgttgtgg |
799 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9973886 |
tgatttggttgcaattattcttcatttctccaccaaatttgctcattcatcttaattgttggacaaacgaggtgagcgtaaaaaagcttagacgttgtgg |
9973787 |
T |
 |
| Q |
800 |
ttggataattatgctataaaataagtaaataatcgtgttatcaaaagcaagcatgaatc-aaagacactatttaaagagttgtaacgggtccattgt |
895 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9973786 |
ttggataattatgctatacaataagtaaataatcgtcttatcaaaagcaagcatgaatcaaaagacactatttaaagagttgtaacgggtccattgt |
9973690 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 907 - 1007
Target Start/End: Complemental strand, 9973657 - 9973553
Alignment:
| Q |
907 |
aatcatggtttttcaaa-ggattgaaatataa-tatttttctttcattttcaaccaa-ttgatgaccatctaaa-tatgaaccaagccacttttatattg |
1002 |
Q |
| |
|
||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
9973657 |
aatcatggtttttcaaaaggattgaaatataaatatttttctttcattttcaaccaaattgatgaccatctaaaatatgaaccaagccacttttatattg |
9973558 |
T |
 |
| Q |
1003 |
ttttt |
1007 |
Q |
| |
|
||||| |
|
|
| T |
9973557 |
ttttt |
9973553 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 570 - 676
Target Start/End: Original strand, 27453069 - 27453175
Alignment:
| Q |
570 |
gatgcatcgacccttactcatttgacattgtactcgagctgtatagtgtgttgcttctaggcaacgacctaccattcacgctattttgtatttgatcaat |
669 |
Q |
| |
|
|||||| || ||||| |||||||||||||||||||||||| || || |||||||||||||||||||||||| ||||||| |||||||||||||| || || |
|
|
| T |
27453069 |
gatgcagcggcccttgctcatttgacattgtactcgagctatacagcgtgttgcttctaggcaacgacctaacattcacactattttgtatttggtccat |
27453168 |
T |
 |
| Q |
670 |
gtcatag |
676 |
Q |
| |
|
||||||| |
|
|
| T |
27453169 |
gtcatag |
27453175 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 122 - 192
Target Start/End: Complemental strand, 9977638 - 9977568
Alignment:
| Q |
122 |
taatcgacatttgaaaaatatatacaaaactaccctacattgaaaatatatatcaaaatgtcctatttttt |
192 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
9977638 |
taatcgacttttgaaaaatatatacaaaactaccctacattgaaaatatatatcaaaatgccctatttttt |
9977568 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 577 - 656
Target Start/End: Complemental strand, 16000411 - 16000332
Alignment:
| Q |
577 |
cgacccttactcatttgacattgtactcgagctgtatagtgtgttgcttctaggcaacgacctaccattcacgctatttt |
656 |
Q |
| |
|
|||||||| |||||||||||||||||||||||| || |||| |||||| | |||||||||||| ||||||| ||||||| |
|
|
| T |
16000411 |
cgacccttgctcatttgacattgtactcgagctatacagtgcattgcttttgggcaacgacctaacattcacactatttt |
16000332 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 61; Significance: 1e-25; HSPs: 4)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 568 - 676
Target Start/End: Original strand, 11069266 - 11069374
Alignment:
| Q |
568 |
gcgatgcatcgacccttactcatttgacattgtactcgagctgtatagtgtgttgcttctaggcaacgacctaccattcacgctattttgtatttgatca |
667 |
Q |
| |
|
|||||||| || ||||| ||||||||||| |||||||||||| || || |||||||||| ||||||||||||| ||||||| |||||||||||||| || |
|
|
| T |
11069266 |
gcgatgcagcggccctttctcatttgacactgtactcgagctatacagcgtgttgcttccaggcaacgacctagcattcacactattttgtatttggtcc |
11069365 |
T |
 |
| Q |
668 |
atgtcatag |
676 |
Q |
| |
|
||||||||| |
|
|
| T |
11069366 |
atgtcatag |
11069374 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 565 - 676
Target Start/End: Original strand, 2078438 - 2078549
Alignment:
| Q |
565 |
gtggcgatgcatcgacccttactcatttgacattgtactcgagctgtatagtgtgttgcttctaggcaacgacctaccattcacgctattttgtatttga |
664 |
Q |
| |
|
|||| |||||| || | ||| ||||||||||| ||||||||||| || | | |||||||| |||||||||||| |||||||||||||||| ||||| |
|
|
| T |
2078438 |
gtggtgatgcagcggctcttgctcatttgacactgtactcgagccatacaacgcgttgcttccgggcaacgacctagcattcacgctattttgcatttgg |
2078537 |
T |
 |
| Q |
665 |
tcaatgtcatag |
676 |
Q |
| |
|
|| ||||||||| |
|
|
| T |
2078538 |
tccatgtcatag |
2078549 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 456 - 541
Target Start/End: Complemental strand, 14911452 - 14911369
Alignment:
| Q |
456 |
aacaacaaacaaaacttattccattaagtgggg-cggttacatggattaaattatggcgccgtagtgttctatcacaaatcatattt |
541 |
Q |
| |
|
|||||||| |||| ||||||||||||||||||| ||| ||||||||| || ||| |||| |||| |||||||| ||||||||||| |
|
|
| T |
14911452 |
aacaacaaccaaaccttattccattaagtggggtcggctacatggatcaa---atgacgccatagtattctatcaaaaatcatattt |
14911369 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 456 - 541
Target Start/End: Original strand, 26884691 - 26884774
Alignment:
| Q |
456 |
aacaacaaacaaaacttattccattaagtgggg-cggttacatggattaaattatggcgccgtagtgttctatcacaaatcatattt |
541 |
Q |
| |
|
|||||||| ||| ||||||||| ||||||||| ||| ||||||||| ||||| ||| ||||||||||||||| ||||||||||| |
|
|
| T |
26884691 |
aacaacaatcaagccttattccactaagtggggtcggctacatggatcaaatt---gcgtcgtagtgttctatcataaatcatattt |
26884774 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 46; Significance: 1e-16; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 567 - 676
Target Start/End: Original strand, 49350373 - 49350482
Alignment:
| Q |
567 |
ggcgatgcatcgacccttactcatttgacattgtactcgagctgtatagtgtgttgcttctaggcaacgacctaccattcacgctattttgtatttgatc |
666 |
Q |
| |
|
||||||||| || ||||| ||||||||||| || |||||||| || || | ||||||||| |||||||||||| ||||||| |||||| ||||||| || |
|
|
| T |
49350373 |
ggcgatgcagcggcccttgctcatttgacactgcactcgagccatacagcgcgttgcttctgggcaacgacctagcattcacactatttcgtatttggtc |
49350472 |
T |
 |
| Q |
667 |
aatgtcatag |
676 |
Q |
| |
|
||||||||| |
|
|
| T |
49350473 |
catgtcatag |
49350482 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 567 - 676
Target Start/End: Complemental strand, 52921174 - 52921065
Alignment:
| Q |
567 |
ggcgatgcatcgacccttactcatttgacattgtactcgagctgtatagtgtgttgcttctaggcaacgacctaccattcacgctattttgtatttgatc |
666 |
Q |
| |
|
||||||||| || ||||| ||||||||||| |||||||||||| || || | |||| ||| |||||||||||| ||||||| |||||| ||||||| || |
|
|
| T |
52921174 |
ggcgatgcagcggcccttgctcatttgacactgtactcgagctatacagcgcgttgattcctggcaacgacctagcattcacactatttcgtatttggtc |
52921075 |
T |
 |
| Q |
667 |
aatgtcatag |
676 |
Q |
| |
|
||||||||| |
|
|
| T |
52921074 |
catgtcatag |
52921065 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 567 - 663
Target Start/End: Original strand, 51442405 - 51442501
Alignment:
| Q |
567 |
ggcgatgcatcgacccttactcatttgacattgtactcgagctgtatagtgtgttgcttctaggcaacgacctaccattcacgctattttgtatttg |
663 |
Q |
| |
|
||||||||| || ||||| ||||||||||| ||||||||||| || | | |||||||| |||||||||||| ||||||| |||||| ||||||| |
|
|
| T |
51442405 |
ggcgatgcagcggcccttgctcatttgacactgtactcgagccatacaacgcgttgcttccgggcaacgacctaacattcacactatttcgtatttg |
51442501 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 41; Significance: 0.0000000000001; HSPs: 3)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 580 - 676
Target Start/End: Original strand, 2544843 - 2544939
Alignment:
| Q |
580 |
cccttactcatttgacattgtactcgagctgtatagtgtgttgcttctaggcaacgacctaccattcacgctattttgtatttgatcaatgtcatag |
676 |
Q |
| |
|
||||| |||||||||||||||||||||||| || | |||||||||||| |||||| || | ||||||| ||| || ||| |||||| ||||||||| |
|
|
| T |
2544843 |
cccttgctcatttgacattgtactcgagctatacaatgtgttgcttctgggcaacaacttgacattcacactacttcgtacttgatccatgtcatag |
2544939 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 562 - 676
Target Start/End: Complemental strand, 6079775 - 6079661
Alignment:
| Q |
562 |
caagtggcgatgcatcgacccttactcatttgacattgtactcgagctgtatagtgtgttgcttctaggcaacgacctaccattcacgctattttgtatt |
661 |
Q |
| |
|
|||| ||||||||| || ||||| ||||||||||| ||||||||||| || | | |||||||| |||||||||||| ||||||| |||||| |||| |
|
|
| T |
6079775 |
caagcggcgatgcagcggcccttgctcatttgacactgtactcgagccatacaacgagttgcttccgggcaacgacctagcattcacactatttcgtatg |
6079676 |
T |
 |
| Q |
662 |
tgatcaatgtcatag |
676 |
Q |
| |
|
|| || ||||||||| |
|
|
| T |
6079675 |
tggtccatgtcatag |
6079661 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 587 - 676
Target Start/End: Original strand, 20430489 - 20430578
Alignment:
| Q |
587 |
tcatttgacattgtactcgagctgtatagtgtgttgcttctaggcaacgacctaccattcacgctattttgtatttgatcaatgtcatag |
676 |
Q |
| |
|
|||||||||| || ||||||||| || || | |||||||| |||||||||||| |||||| |||||||||||||| | ||||||||| |
|
|
| T |
20430489 |
tcatttgacactgcactcgagctatacagcgcgttgcttccgggcaacgacctaaaattcacactattttgtatttggttcatgtcatag |
20430578 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 40; Significance: 0.0000000000004; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 565 - 676
Target Start/End: Complemental strand, 16290940 - 16290829
Alignment:
| Q |
565 |
gtggcgatgcatcgacccttactcatttgacattgtactcgagctgtatagtgtgttgcttctaggcaacgacctaccattcacgctattttgtatttga |
664 |
Q |
| |
|
||||| ||||| | |||||| ||||||||||| |||||||||| || | |||||||||| |||||||||||| ||||||| |||||| ||||||| |
|
|
| T |
16290940 |
gtggcaatgcagcaacccttgctcatttgacactgtactcgagtcatacaaggtgttgcttccgggcaacgacctagcattcacactatttcgtatttgg |
16290841 |
T |
 |
| Q |
665 |
tcaatgtcatag |
676 |
Q |
| |
|
|| ||||||||| |
|
|
| T |
16290840 |
tccatgtcatag |
16290829 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 571 - 650
Target Start/End: Complemental strand, 30335868 - 30335789
Alignment:
| Q |
571 |
atgcatcgacccttactcatttgacattgtactcgagctgtatagtgtgttgcttctaggcaacgacctaccattcacgc |
650 |
Q |
| |
|
||||| |||| ||| ||||||||||| |||||||||||| || | |||||||||| | |||||| | ||| ||||||||| |
|
|
| T |
30335868 |
atgcagcgactcttgctcatttgacactgtactcgagctatacaatgtgttgcttatgggcaaccatctagcattcacgc |
30335789 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0279 (Bit Score: 38; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0279
Description:
Target: scaffold0279; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 567 - 676
Target Start/End: Complemental strand, 18578 - 18469
Alignment:
| Q |
567 |
ggcgatgcatcgacccttactcatttgacattgtactcgagctgtatagtgtgttgcttctaggcaacgacctaccattcacgctattttgtatttgatc |
666 |
Q |
| |
|
||||||||| || ||||| ||||||||||| | |||| ||||| || || | |||||||| |||||||||||| || |||| |||||| ||||||| || |
|
|
| T |
18578 |
ggcgatgcagcggcccttgctcatttgacactatacttgagctatacagcgcgttgcttccgggcaacgacctagcaatcacactatttcgtatttggtc |
18479 |
T |
 |
| Q |
667 |
aatgtcatag |
676 |
Q |
| |
|
||||||||| |
|
|
| T |
18478 |
catgtcatag |
18469 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0001 (Bit Score: 38; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0001
Description:
Target: scaffold0001; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 567 - 676
Target Start/End: Complemental strand, 440279 - 440170
Alignment:
| Q |
567 |
ggcgatgcatcgacccttactcatttgacattgtactcgagctgtatagtgtgttgcttctaggcaacgacctaccattcacgctattttgtatttgatc |
666 |
Q |
| |
|
||||||||| || ||||| ||||||||||| |||||||||||| || || | || | ||| || ||||||||| ||||||| |||||| ||||||| || |
|
|
| T |
440279 |
ggcgatgcagcggcccttgctcatttgacactgtactcgagctatacagcgcatttcctctgggaaacgacctagcattcacactatttcgtatttggtc |
440180 |
T |
 |
| Q |
667 |
aatgtcatag |
676 |
Q |
| |
|
||||||||| |
|
|
| T |
440179 |
catgtcatag |
440170 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 38; Significance: 0.000000000006; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 567 - 676
Target Start/End: Original strand, 51450666 - 51450775
Alignment:
| Q |
567 |
ggcgatgcatcgacccttactcatttgacattgtactcgagctgtatagtgtgttgcttctaggcaacgacctaccattcacgctattttgtatttgatc |
666 |
Q |
| |
|
||||||||| || ||||| ||||||||||| ||||||||| | || || | |||||||| |||||||||||| ||||||| |||||| ||||||| || |
|
|
| T |
51450666 |
ggcgatgcagcggcccttgctcatttgacactgtactcgaaccatacagcgcgttgcttccgggcaacgacctagcattcacactatttcgtatttggtc |
51450765 |
T |
 |
| Q |
667 |
aatgtcatag |
676 |
Q |
| |
|
||| ||||| |
|
|
| T |
51450766 |
catgccatag |
51450775 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 567 - 676
Target Start/End: Complemental strand, 52136508 - 52136401
Alignment:
| Q |
567 |
ggcgatgcatcgacccttactcatttgacattgtactcgagctgtatagtgtgttgcttctaggcaacgacctaccattcacgctattttgtatttgatc |
666 |
Q |
| |
|
||||||||| || ||||| ||||||||||| | |||||||| || | |||||||||| |||||||||||| ||||||| |||||| ||||||| || |
|
|
| T |
52136508 |
ggcgatgcagcggcccttgctcatttgacact--actcgagccatacaacgtgttgcttccgggcaacgacctagcattcacactatttcgtatttggtc |
52136411 |
T |
 |
| Q |
667 |
aatgtcatag |
676 |
Q |
| |
|
||||||||| |
|
|
| T |
52136410 |
tatgtcatag |
52136401 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 571 - 676
Target Start/End: Original strand, 15218187 - 15218292
Alignment:
| Q |
571 |
atgcatcgacccttactcatttgacattgtactcgagctgtatagtgtgttgcttctaggcaacgacctaccattcacgctattttgtatttgatcaatg |
670 |
Q |
| |
|
||||| || ||||| ||||||||||| |||||||||||| || || | |||||||| || ||||||||| ||||| | |||||| |||||| || ||| |
|
|
| T |
15218187 |
atgcagcggcccttgctcatttgacactgtactcgagctatacagcgcgttgcttccgggaaacgacctagcattcccactatttcatatttggtccatg |
15218286 |
T |
 |
| Q |
671 |
tcatag |
676 |
Q |
| |
|
|||||| |
|
|
| T |
15218287 |
tcatag |
15218292 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0024 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0024
Description:
Target: scaffold0024; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 630 - 676
Target Start/End: Original strand, 48222 - 48268
Alignment:
| Q |
630 |
gcaacgacctaccattcacgctattttgtatttgatcaatgtcatag |
676 |
Q |
| |
|
||||||||||| ||||||| |||||| |||||||||| ||||||||| |
|
|
| T |
48222 |
gcaacgacctagcattcacactatttcgtatttgatccatgtcatag |
48268 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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