View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5224_high_10 (Length: 355)

Name: NF5224_high_10
Description: NF5224
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5224_high_10
NF5224_high_10
[»] chr8 (3 HSPs)
chr8 (1-336)||(27547986-27548321)
chr8 (274-335)||(9936806-9936867)
chr8 (269-329)||(31548294-31548354)
[»] chr7 (19 HSPs)
chr7 (268-336)||(31808509-31808576)
chr7 (268-329)||(2525844-2525905)
chr7 (268-327)||(35238184-35238243)
chr7 (268-341)||(37824672-37824745)
chr7 (276-341)||(38134414-38134479)
chr7 (270-318)||(44172892-44172940)
chr7 (269-316)||(10893870-10893917)
chr7 (278-341)||(17930449-17930512)
chr7 (278-317)||(33668659-33668698)
chr7 (239-341)||(12843005-12843107)
chr7 (269-327)||(30013195-30013253)
chr7 (251-316)||(10893330-10893395)
chr7 (271-327)||(16827639-16827696)
chr7 (269-342)||(22484010-22484083)
chr7 (269-318)||(24146825-24146874)
chr7 (285-330)||(27980793-27980838)
chr7 (268-309)||(48964062-48964103)
chr7 (276-320)||(18678155-18678199)
chr7 (270-318)||(36314629-36314677)
[»] chr5 (7 HSPs)
chr5 (268-341)||(28296314-28296387)
chr5 (270-335)||(38749565-38749630)
chr5 (283-334)||(11596470-11596521)
chr5 (276-334)||(23287357-23287415)
chr5 (231-316)||(27253296-27253381)
chr5 (269-313)||(309061-309105)
chr5 (283-335)||(2039864-2039916)
[»] chr1 (9 HSPs)
chr1 (263-336)||(21057774-21057847)
chr1 (263-335)||(19637760-19637832)
chr1 (263-334)||(7988446-7988517)
chr1 (268-318)||(31667434-31667484)
chr1 (269-327)||(33202903-33202961)
chr1 (276-335)||(26462653-26462712)
chr1 (268-341)||(6427336-6427409)
chr1 (270-330)||(14332406-14332465)
chr1 (274-318)||(29415757-29415801)
[»] scaffold0022 (1 HSPs)
scaffold0022 (268-335)||(99885-99952)
[»] chr2 (6 HSPs)
chr2 (263-326)||(18570973-18571036)
chr2 (276-326)||(16630796-16630846)
chr2 (268-332)||(31026690-31026754)
chr2 (263-341)||(43586000-43586078)
chr2 (263-335)||(30298444-30298514)
chr2 (261-317)||(34006825-34006881)
[»] chr6 (11 HSPs)
chr6 (264-341)||(20371106-20371183)
chr6 (270-336)||(15443686-15443752)
chr6 (280-341)||(8623191-8623252)
chr6 (270-318)||(6284663-6284711)
chr6 (274-334)||(10031563-10031623)
chr6 (276-316)||(10157995-10158035)
chr6 (297-341)||(10760870-10760914)
chr6 (283-335)||(13211296-13211348)
chr6 (269-333)||(13595450-13595514)
chr6 (269-329)||(18612619-18612679)
chr6 (270-318)||(29711271-29711319)
[»] chr4 (10 HSPs)
chr4 (269-334)||(3568851-3568916)
chr4 (270-318)||(25390888-25390936)
chr4 (276-327)||(14465302-14465353)
chr4 (276-327)||(18513249-18513300)
chr4 (270-341)||(37496690-37496761)
chr4 (263-309)||(13307895-13307941)
chr4 (278-335)||(15969345-15969402)
chr4 (276-336)||(22799901-22799962)
chr4 (283-335)||(5654606-5654658)
chr4 (268-328)||(43368078-43368138)
[»] chr3 (3 HSPs)
chr3 (270-342)||(21478668-21478740)
chr3 (267-341)||(39682870-39682944)
chr3 (278-335)||(34409352-34409409)
[»] scaffold0024 (1 HSPs)
scaffold0024 (270-341)||(18110-18181)


Alignment Details
Target: chr8 (Bit Score: 296; Significance: 1e-166; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 1 - 336
Target Start/End: Complemental strand, 27548321 - 27547986
Alignment:
Q  1 ggaccggccacgtgcttaagagaacccatccccttgtacttgcacagatacatgtcagtacactcccagttccttttatattcataaaatccccacttca 100  Q
    |||||| ||| |||||||||||| || ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27548321 ggaccgaccatgtgcttaagagatccgatccccttgtacttgcacaaatacatgtcagtacactcccagttccttttatattcataaaatccccacttca 27548222  T
Q  101 aacaaggaaaggatctctgatattcaaaattcatagttcatcactcaatgacctctacaactgtattaacattttggatcaaaatatcaatgtctcactg 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27548221 aacaaggaaaggatctctgatattcaaaattcatagttcatcactcaatgacctctacaactgtattaacattttggatcaaaatatcaatgtctcactg 27548122  T
Q  201 ttggatatcttgaatagcatcctacactgaagcaccgtcacttttgatcaaaggcgtatctagtgttcgacaccaacacatgtgattatattgacttatg 300  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||||||||    
T  27548121 ttggatatcttgaatagcatcctacactgaagcaccgacacttttgatcaaaggtgtatccagtgttcaacaccaacacatgtgattatattgacttatg 27548022  T
Q  301 tcattttctaaaattattttcggtgtcgacgtgtca 336  Q
    |||||||||||||| |||||||||||||||||||||    
T  27548021 tcattttctaaaatcattttcggtgtcgacgtgtca 27547986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 274 - 335
Target Start/End: Complemental strand, 9936867 - 9936806
Alignment:
Q  274 caacacatgtgattatattgacttatgtcattttctaaaattattttcggtgtcgacgtgtc 335  Q
    |||||||| |||||||||||| |||| ||||||||| |||||||| ||| ||||||||||||    
T  9936867 caacacatatgattatattgaattatatcattttcttaaattattatcgatgtcgacgtgtc 9936806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 329
Target Start/End: Original strand, 31548294 - 31548354
Alignment:
Q  269 gacaccaacacatgtgattatattgacttatgtcattttctaaaattattttcggtgtcga 329  Q
    |||||| ||||||||||||| ||||| |||||||||||| | |||| ||| ||||||||||    
T  31548294 gacaccgacacatgtgattacattgaattatgtcattttatcaaataattatcggtgtcga 31548354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 1e-16; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 268 - 336
Target Start/End: Original strand, 31808509 - 31808576
Alignment:
Q  268 cgacaccaacacatgtgattatattgacttatgtcattttctaaaattattttcggtgtcgacgtgtca 336  Q
    ||||||||||||||||||||| |||||||| ||||||||||| |||||||| |||||| ||||||||||    
T  31808509 cgacaccaacacatgtgattacattgacttgtgtcattttctcaaattattatcggtg-cgacgtgtca 31808576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 268 - 329
Target Start/End: Original strand, 2525844 - 2525905
Alignment:
Q  268 cgacaccaacacatgtgattatattgacttatgtcattttctaaaattattttcggtgtcga 329  Q
    ||||||| |||||| |||||||||||| ||||||||||| || |||||||| ||||||||||    
T  2525844 cgacaccgacacatatgattatattgaattatgtcatttgctcaaattattatcggtgtcga 2525905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 268 - 327
Target Start/End: Original strand, 35238184 - 35238243
Alignment:
Q  268 cgacaccaacacatgtgattatattgacttatgtcattttctaaaattattttcggtgtc 327  Q
    |||||| ||||| |||||||||||||| |||||||||||||| ||| |||| ||||||||    
T  35238184 cgacactaacacgtgtgattatattgaattatgtcattttctcaaaatattatcggtgtc 35238243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 268 - 341
Target Start/End: Original strand, 37824672 - 37824745
Alignment:
Q  268 cgacaccaacacatgtgattatattgacttatgtcattttctaaaattattttcggtgtcgacgtgtcaatgtc 341  Q
    ||||| |||||||  || ||| ||||| ||||||||||||||||||||||| | || || ||||||||||||||    
T  37824672 cgacatcaacacacttgtttaaattgaattatgtcattttctaaaattattataggcgtggacgtgtcaatgtc 37824745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 276 - 341
Target Start/End: Original strand, 38134414 - 38134479
Alignment:
Q  276 acacatgtgattatattgacttatgtcattttctaaaattattttcggtgtcgacgtgtcaatgtc 341  Q
    |||||| |||||| ||||| |||||||||||||| |||||||| |||||||| || |||| |||||    
T  38134414 acacatatgattacattgaattatgtcattttctcaaattattatcggtgtcaacatgtccatgtc 38134479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 318
Target Start/End: Original strand, 44172892 - 44172940
Alignment:
Q  270 acaccaacacatgtgattatattgacttatgtcattttctaaaattatt 318  Q
    |||| |||||||||||||| ||||| |||||||||||||| ||||||||    
T  44172892 acacaaacacatgtgattacattgaattatgtcattttctcaaattatt 44172940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 269 - 316
Target Start/End: Original strand, 10893870 - 10893917
Alignment:
Q  269 gacaccaacacatgtgattatattgacttatgtcattttctaaaatta 316  Q
    |||||||||||||||||||| ||| | |||||||||||||| ||||||    
T  10893870 gacaccaacacatgtgattacattcaattatgtcattttcttaaatta 10893917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 278 - 341
Target Start/End: Complemental strand, 17930512 - 17930449
Alignment:
Q  278 acatgtgattatattgacttatgtcattttctaaaattattttcggtgtcgacgtgtcaatgtc 341  Q
    ||||||||| | ||||| | |||||||||||| |||||| | | ||||||||||||||||||||    
T  17930512 acatgtgatgacattgaatgatgtcattttcttaaattagtattggtgtcgacgtgtcaatgtc 17930449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 278 - 317
Target Start/End: Original strand, 33668659 - 33668698
Alignment:
Q  278 acatgtgattatattgacttatgtcattttctaaaattat 317  Q
    ||||||||||||||| | ||||||||||||||||||||||    
T  33668659 acatgtgattatattaaattatgtcattttctaaaattat 33668698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 341
Target Start/End: Original strand, 12843005 - 12843107
Alignment:
Q  239 cacttttgatcaaaggcgtatctagtgttcgacaccaacacatgtgattatattgacttatgtcattttctaaaattattttcggtgtcgacgtgtcaat 338  Q
    ||||| |||||||||| || ||| |||| |||| |  |||| |||||||||||| | |||||||||||||| |||||| |  |||| | ||||||||| |    
T  12843005 cacttctgatcaaaggtgtgtctcgtgtccgacccagacacgtgtgattatattcaattatgtcattttctcaaattaataccggtcttgacgtgtcagt 12843104  T
Q  339 gtc 341  Q
    |||    
T  12843105 gtc 12843107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 269 - 327
Target Start/End: Complemental strand, 30013253 - 30013195
Alignment:
Q  269 gacaccaacacatgtgattatattgacttatgtcattttctaaaattattttcggtgtc 327  Q
    ||||| |||||||||||||||||||| ||| |||||||||| | |||||| | ||||||    
T  30013253 gacacaaacacatgtgattatattgaattacgtcattttctcatattattattggtgtc 30013195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 316
Target Start/End: Original strand, 10893330 - 10893395
Alignment:
Q  251 aaggcgtatctagtgttcgacaccaacacatgtgattatattgacttatgtcattttctaaaatta 316  Q
    ||||||| ||| |||| ||| ||||||||||| ||||| ||| | |||||||||||||| ||||||    
T  10893330 aaggcgtgtctggtgtccgataccaacacatgcgattacattcaattatgtcattttctcaaatta 10893395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 327
Target Start/End: Complemental strand, 16827696 - 16827639
Alignment:
Q  271 caccaacacatgtgattatattgacttatgtcattttctaaaattattt-tcggtgtc 327  Q
    |||||||||||||||||| ||||| | ||||||||| || ||||||||| ||||||||    
T  16827696 caccaacacatgtgattacattgaatcatgtcatttgctcaaattatttatcggtgtc 16827639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 342
Target Start/End: Complemental strand, 22484083 - 22484010
Alignment:
Q  269 gacaccaacacatgtgattatattgacttatgtcattttctaaaattattttcggtgtcgacgtgtcaatgtct 342  Q
    |||||| |||||| | |||||| ||| |||||  ||||||||||||||||  |||||||| ||||||| |||||    
T  22484083 gacaccgacacatataattatactgaattatgcaattttctaaaattattagcggtgtcggcgtgtcagtgtct 22484010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 318
Target Start/End: Complemental strand, 24146874 - 24146825
Alignment:
Q  269 gacaccaacacatgtgattatattgacttatgtcattttctaaaattatt 318  Q
    |||||| |||||| | |||||||||| |||||| ||||||||||||||||    
T  24146874 gacaccgacacatataattatattgaattatgtgattttctaaaattatt 24146825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 330
Target Start/End: Complemental strand, 27980838 - 27980793
Alignment:
Q  285 attatattgacttatgtcattttctaaaattattttcggtgtcgac 330  Q
    |||| ||||| |||||||||||| |||||||||||||||| |||||    
T  27980838 attacattgaattatgtcattttttaaaattattttcggtatcgac 27980793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 309
Target Start/End: Original strand, 48964062 - 48964103
Alignment:
Q  268 cgacaccaacacatgtgattatattgacttatgtcattttct 309  Q
    |||||||||||| |||||||| ||||| ||||||||||||||    
T  48964062 cgacaccaacacttgtgattaaattgaattatgtcattttct 48964103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 276 - 320
Target Start/End: Complemental strand, 18678199 - 18678155
Alignment:
Q  276 acacatgtgattatattgacttatgtcattttctaaaattatttt 320  Q
    ||||| ||||||||||||| |||||||||||||| ||| ||||||    
T  18678199 acacacgtgattatattgaattatgtcattttctcaaaatatttt 18678155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 318
Target Start/End: Original strand, 36314629 - 36314677
Alignment:
Q  270 acaccaacacatgtgattatattgacttatgtcattttctaaaattatt 318  Q
    |||||||||||| |||||| |||||  ||||||||||||| ||||||||    
T  36314629 acaccaacacatatgattacattgaaatatgtcattttctcaaattatt 36314677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 268 - 341
Target Start/End: Complemental strand, 28296387 - 28296314
Alignment:
Q  268 cgacaccaacacatgtgattatattgacttatgtcattttctaaaattattttcggtgtcgacgtgtcaatgtc 341  Q
    |||||||||||||| ||| || ||||| |||||||||||||| |||||||| ||||||||||| |||| |||||    
T  28296387 cgacaccaacacatatgagtacattgaattatgtcattttctcaaattattatcggtgtcgacttgtccatgtc 28296314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 270 - 335
Target Start/End: Original strand, 38749565 - 38749630
Alignment:
Q  270 acaccaacacatgtgattatattgacttatgtcattttctaaaattattttcggtgtcgacgtgtc 335  Q
    |||||||||||| | |||| ||||| |||||||||||| | |||||||| ||||||||||| ||||    
T  38749565 acaccaacacatataattacattgaattatgtcattttttcaaattattatcggtgtcgacatgtc 38749630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 283 - 334
Target Start/End: Original strand, 11596470 - 11596521
Alignment:
Q  283 tgattatattgacttatgtcattttctaaaattattttcggtgtcgacgtgt 334  Q
    |||||| ||||| |||||||||||||| |||||||| ||||| |||||||||    
T  11596470 tgattacattgaattatgtcattttctcaaattattatcggtatcgacgtgt 11596521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 276 - 334
Target Start/End: Original strand, 23287357 - 23287415
Alignment:
Q  276 acacatgtgattatattgacttatgtcattttctaaaattattttcggtgtcgacgtgt 334  Q
    |||||| | |||||||||| |||||||||||||  |||||||| | |||||||||||||    
T  23287357 acacatataattatattgaattatgtcattttcctaaattattattggtgtcgacgtgt 23287415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 316
Target Start/End: Complemental strand, 27253381 - 27253296
Alignment:
Q  231 agcaccgtcacttttgatcaaaggcgtatctagtgttcgacaccaacacatgtgattatattgacttatgtcattttctaaaatta 316  Q
    ||||||| ||||||||||  ||| ||||||||||||  |||||  ||||||||||||| ||| | ||||| |||||| | ||||||    
T  27253381 agcaccgacacttttgattgaagccgtatctagtgtcagacactgacacatgtgattacattcaattatgacattttttcaaatta 27253296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 269 - 313
Target Start/End: Complemental strand, 309105 - 309061
Alignment:
Q  269 gacaccaacacatgtgattatattgacttatgtcattttctaaaa 313  Q
    |||||| |||||||| |||||||| | ||||||||||||||||||    
T  309105 gacaccgacacatgtcattatattaaattatgtcattttctaaaa 309061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 335
Target Start/End: Original strand, 2039864 - 2039916
Alignment:
Q  283 tgattatattgacttatgtcattttctaaaattattttcggtgtcgacgtgtc 335  Q
    |||||| ||||| | |||||||||||| ||||||||  |||||||||||||||    
T  2039864 tgattacattgaatcatgtcattttctcaaattattaccggtgtcgacgtgtc 2039916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 263 - 336
Target Start/End: Complemental strand, 21057847 - 21057774
Alignment:
Q  263 gtgttcgacaccaacacatgtgattatattgacttatgtcattttctaaaattattttcggtgtcgacgtgtca 336  Q
    ||||||||||| |||||||| ||||| ||| | |||||| ||||||||||||||||  ||||||||||||||||    
T  21057847 gtgttcgacactaacacatgcgattacattcaattatgttattttctaaaattattagcggtgtcgacgtgtca 21057774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 263 - 335
Target Start/End: Complemental strand, 19637832 - 19637760
Alignment:
Q  263 gtgttcgacaccaacacatgtgattatattgacttatgtcattttctaaaattattttcggtgtcgacgtgtc 335  Q
    |||| ||||||| |||||| |||||| ||||| | |||||||||||| |||||||| |||||||||| |||||    
T  19637832 gtgtccgacaccgacacatatgattacattgaataatgtcattttcttaaattattatcggtgtcgatgtgtc 19637760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 263 - 334
Target Start/End: Original strand, 7988446 - 7988517
Alignment:
Q  263 gtgttcgacaccaacacatgtgattatattgacttatgtcattttctaaaattattttcggtgtcgacgtgt 334  Q
    |||| |||||||||||| | |||||| ||||| |||||||| ||||| |||||||| || ||||||||||||    
T  7988446 gtgtccgacaccaacacttatgattacattgaattatgtcactttcttaaattattatcagtgtcgacgtgt 7988517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 268 - 318
Target Start/End: Complemental strand, 31667484 - 31667434
Alignment:
Q  268 cgacaccaacacatgtgattatattgacttatgtcattttctaaaattatt 318  Q
    ||||||| ||||||||||||| ||| | |||||||||||||||||||||||    
T  31667484 cgacaccgacacatgtgattacatttaattatgtcattttctaaaattatt 31667434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 269 - 327
Target Start/End: Complemental strand, 33202961 - 33202903
Alignment:
Q  269 gacaccaacacatgtgattatattgacttatgtcattttctaaaattattttcggtgtc 327  Q
    |||||||| |||| |||||| ||||| |||||||||||| |||||||||| ||||||||    
T  33202961 gacaccaaaacatatgattacattgatttatgtcattttttaaaattattatcggtgtc 33202903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 276 - 335
Target Start/End: Original strand, 26462653 - 26462712
Alignment:
Q  276 acacatgtgattatattgacttatgtcattttctaaaattattttcggtgtcgacgtgtc 335  Q
    ||||||||||||| ||| | |||| ||||||||| |||||||| || |||||||||||||    
T  26462653 acacatgtgattacattcaattatttcattttcttaaattattatcagtgtcgacgtgtc 26462712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 341
Target Start/End: Complemental strand, 6427409 - 6427336
Alignment:
Q  268 cgacaccaacacatgtgattatattgacttatgtcattttctaaaattattttcggtgtcgacgtgtcaatgtc 341  Q
    |||||||||||||| | |||| ||||| |||||| ||||||| ||||||||  |||||| | ||||||| ||||    
T  6427409 cgacaccaacacatataattacattgaattatgtgattttctcaaattattagcggtgttggcgtgtcagtgtc 6427336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 14332465 - 14332406
Alignment:
Q  270 acaccaacacatgtgattatattgacttatgtcattttctaaaattattttcggtgtcgac 330  Q
    ||||| ||| ||||||||| ||||| |||||||||||||| ||||| || |||||||||||    
T  14332465 acaccgacatatgtgattacattgaattatgtcattttctcaaatt-ttatcggtgtcgac 14332406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 274 - 318
Target Start/End: Complemental strand, 29415801 - 29415757
Alignment:
Q  274 caacacatgtgattatattgacttatgtcattttctaaaattatt 318  Q
    ||||||||||||||||  ||| |||||||||||||| ||||||||    
T  29415801 caacacatgtgattatgctgaattatgtcattttcttaaattatt 29415757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 268 - 335
Target Start/End: Complemental strand, 99952 - 99885
Alignment:
Q  268 cgacaccaacacatgtgattatattgacttatgtcattttctaaaattattttcggtgtcgacgtgtc 335  Q
    |||||||||||||| | |||| ||||| |||||| |||||||||||||||| ||||||||||| ||||    
T  99952 cgacaccaacacatataattacattgaattatgttattttctaaaattattatcggtgtcgacatgtc 99885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 36; Significance: 0.00000000003; HSPs: 6)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 263 - 326
Target Start/End: Complemental strand, 18571036 - 18570973
Alignment:
Q  263 gtgttcgacaccaacacatgtgattatattgacttatgtcattttctaaaattattttcggtgt 326  Q
    |||||||||||  |||||| |||||| ||||| |||||||||||||| |||||||| |||||||    
T  18571036 gtgttcgacactgacacatatgattacattgaattatgtcattttctcaaattattatcggtgt 18570973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 276 - 326
Target Start/End: Complemental strand, 16630846 - 16630796
Alignment:
Q  276 acacatgtgattatattgacttatgtcattttctaaaattattttcggtgt 326  Q
    ||||||||||||| ||||| |||||||||||||| |||||||| |||||||    
T  16630846 acacatgtgattaaattgaattatgtcattttcttaaattattatcggtgt 16630796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 332
Target Start/End: Complemental strand, 31026754 - 31026690
Alignment:
Q  268 cgacaccaacacatgtgattatattgacttatgtcattttctaaaattattttcggtgtcgacgt 332  Q
    ||||||| ||| || |||||| ||||| |||||||||||||| |||||||| ||||| |||||||    
T  31026754 cgacaccgacatatatgattacattgaattatgtcattttcttaaattattatcggtctcgacgt 31026690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 341
Target Start/End: Original strand, 43586000 - 43586078
Alignment:
Q  263 gtgttcgacaccaacacatgtgattatattgacttatgtcattttctaaaattattttcggtgtcgacgtgtcaatgtc 341  Q
    |||| ||||||| |||| |||||||| ||||| |||||||||||||| ||| | || || |||| ||||||||| ||||    
T  43586000 gtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaaattttatctgtgttgacgtgtcagtgtc 43586078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 335
Target Start/End: Original strand, 30298444 - 30298514
Alignment:
Q  263 gtgttcgacaccaacacatgtgattatattgacttatgtcattttctaaaattattttcggtgtcgacgtgtc 335  Q
    |||| ||||||| |||||||  |||| | ||| |||||||||||| | |||||||| ||||||||||||||||    
T  30298444 gtgtccgacaccgacacatg--attacactgaattatgtcattttattaaattattatcggtgtcgacgtgtc 30298514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 34006881 - 34006825
Alignment:
Q  261 tagtgttcgacaccaacacatgtgattatattgacttatgtcattttctaaaattat 317  Q
    |||||| | ||||| ||||||||||||||||| | |||| |||||| ||||||||||    
T  34006881 tagtgtccaacaccgacacatgtgattatattcaattatatcatttactaaaattat 34006825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 34; Significance: 0.0000000005; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 341
Target Start/End: Original strand, 20371106 - 20371183
Alignment:
Q  264 tgttcgacaccaacacatgtgattatattgacttatgtcattttctaaaattattttcggtgtcgacgtgtcaatgtc 341  Q
    ||||||||||| |||||| | || | ||||| |||||| ||||||| ||||||||  |||||||| ||||||||||||    
T  20371106 tgttcgacaccgacacatataatcacattgagttatgtgattttctcaaattattagcggtgtcggcgtgtcaatgtc 20371183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 270 - 336
Target Start/End: Complemental strand, 15443752 - 15443686
Alignment:
Q  270 acaccaacacatgtgattatattgacttatgtcattttctaaaattattttcggtgtcgacgtgtca 336  Q
    ||||||||| || | |||||||||| |||||| ||||||| |||||||| | | |||||||||||||    
T  15443752 acaccaacatatataattatattgaattatgttattttctcaaattattattgatgtcgacgtgtca 15443686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 341
Target Start/End: Complemental strand, 8623252 - 8623191
Alignment:
Q  280 atgtgattatattgacttatgtcattttctaaaattattttcggtgtcgacgtgtcaatgtc 341  Q
    ||||||||| ||| | | |||||||||||||||||| || |||||||| |||||||| ||||    
T  8623252 atgtgattacattcaatgatgtcattttctaaaattgttatcggtgtcaacgtgtcagtgtc 8623191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 318
Target Start/End: Original strand, 6284663 - 6284711
Alignment:
Q  270 acaccaacacatgtgattatattgacttatgtcattttctaaaattatt 318  Q
    |||| |||||||||||||| ||| | |||||||||||||| ||||||||    
T  6284663 acactaacacatgtgattaaattcaattatgtcattttctcaaattatt 6284711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 274 - 334
Target Start/End: Complemental strand, 10031623 - 10031563
Alignment:
Q  274 caacacatgtgattatattgacttatgtcattttctaaaattattttcggtgtcgacgtgt 334  Q
    |||||| |||||||| ||||| |||||||||||||| ||| | || |||||||| ||||||    
T  10031623 caacacttgtgattacattgaattatgtcattttctcaaaattttatcggtgtcaacgtgt 10031563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 276 - 316
Target Start/End: Complemental strand, 10158035 - 10157995
Alignment:
Q  276 acacatgtgattatattgacttatgtcattttctaaaatta 316  Q
    ||||||||||||| ||||| |||||||||||||| ||||||    
T  10158035 acacatgtgattacattgaattatgtcattttctcaaatta 10157995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 341
Target Start/End: Original strand, 10760870 - 10760914
Alignment:
Q  297 tatgtcattttctaaaattattttcggtgtcgacgtgtcaatgtc 341  Q
    ||||||||||||| |||||||| || |||||||||||||| ||||    
T  10760870 tatgtcattttctcaaattattatcagtgtcgacgtgtcagtgtc 10760914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 335
Target Start/End: Original strand, 13211296 - 13211348
Alignment:
Q  283 tgattatattgacttatgtcattttctaaaattattttcggtgtcgacgtgtc 335  Q
    |||||||||| | |||||||||||||| |||||||| ||  ||||||||||||    
T  13211296 tgattatattaaattatgtcattttctcaaattattatcaatgtcgacgtgtc 13211348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 269 - 333
Target Start/End: Complemental strand, 13595514 - 13595450
Alignment:
Q  269 gacaccaacacatgtgattatattgacttatgtcattttctaaaattattttcggtgtcgacgtg 333  Q
    |||||| ||||||||||||||||||| || ||| |||||||  ||||||| ||| ||| ||||||    
T  13595514 gacacctacacatgtgattatattgaattgtgtaattttctcgaattattatcgctgttgacgtg 13595450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 269 - 329
Target Start/End: Complemental strand, 18612679 - 18612619
Alignment:
Q  269 gacaccaacacatgtgattatattgacttatgtcattttctaaaattattttcggtgtcga 329  Q
    ||||||||||||| |||||| ||||| ||||| ||||||| | ||||||| ||| ||||||    
T  18612679 gacaccaacacatatgattacattgaattatgacattttcaagaattattatcgatgtcga 18612619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 318
Target Start/End: Complemental strand, 29711319 - 29711271
Alignment:
Q  270 acaccaacacatgtgattatattgacttatgtcattttctaaaattatt 318  Q
    ||||| ||||||||| ||||| ||| |||||||||||||| ||||||||    
T  29711319 acaccgacacatgtggttataatgaattatgtcattttctcaaattatt 29711271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 34; Significance: 0.0000000005; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 269 - 334
Target Start/End: Original strand, 3568851 - 3568916
Alignment:
Q  269 gacaccaacacatgtgattatattgacttatgtcattttctaaaattattttcggtgtcgacgtgt 334  Q
    |||||| |||||| |||||  |||||  ||||||||||||| |||||| |||||||||||||||||    
T  3568851 gacaccgacacatatgatttaattgaactatgtcattttctcaaattactttcggtgtcgacgtgt 3568916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 318
Target Start/End: Original strand, 25390888 - 25390936
Alignment:
Q  270 acaccaacacatgtgattatattgacttatgtcattttctaaaattatt 318  Q
    ||||| |||||| || ||||||||| |||||||||||||||||||||||    
T  25390888 acaccgacacatatggttatattgaattatgtcattttctaaaattatt 25390936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 276 - 327
Target Start/End: Original strand, 14465302 - 14465353
Alignment:
Q  276 acacatgtgattatattgacttatgtcattttctaaaattattttcggtgtc 327  Q
    |||||| |||||| ||||| |||||||||||||| |||||||| ||||||||    
T  14465302 acacatatgattaaattgaattatgtcattttctcaaattattatcggtgtc 14465353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 276 - 327
Target Start/End: Original strand, 18513249 - 18513300
Alignment:
Q  276 acacatgtgattatattgacttatgtcattttctaaaattattttcggtgtc 327  Q
    |||||| |||||| ||||| |||||||||||||| |||||||| ||||||||    
T  18513249 acacatatgattacattgaattatgtcattttctcaaattattatcggtgtc 18513300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 270 - 341
Target Start/End: Complemental strand, 37496761 - 37496690
Alignment:
Q  270 acaccaacacatgtgattatattgacttatgtcattttctaaaattattttcggtgtcgacgtgtcaatgtc 341  Q
    ||||| |||| |||||||| ||||| |||||||||||||| |||  ||| |||||||| |||||||| ||||    
T  37496761 acaccgacacttgtgattacattgaattatgtcattttctcaaaaaattatcggtgtcaacgtgtcagtgtc 37496690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 309
Target Start/End: Complemental strand, 13307941 - 13307895
Alignment:
Q  263 gtgttcgacaccaacacatgtgattatattgacttatgtcattttct 309  Q
    |||| |||||||||||| |||||||| ||||| ||||||||||||||    
T  13307941 gtgtccgacaccaacacttgtgattacattgaattatgtcattttct 13307895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 335
Target Start/End: Complemental strand, 15969402 - 15969345
Alignment:
Q  278 acatgtgattatattgacttatgtcattttctaaaattattttcggtgtcgacgtgtc 335  Q
    ||||||||||| ||| | |||||| ||||| |||||||||| || |||||||||||||    
T  15969402 acatgtgattacattaaattatgttattttttaaaattattatcagtgtcgacgtgtc 15969345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 336
Target Start/End: Original strand, 22799901 - 22799962
Alignment:
Q  276 acacatgtgattatattgacttatgtcattttct-aaaattattttcggtgtcgacgtgtca 336  Q
    |||| |||||||| ||||| |||||||||||||| ||||||||| | | |||||||||||||    
T  22799901 acacgtgtgattacattgaattatgtcattttctaaaaattattcttgttgtcgacgtgtca 22799962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 335
Target Start/End: Original strand, 5654606 - 5654658
Alignment:
Q  283 tgattatattgacttatgtcattttctaaaattattttcggtgtcgacgtgtc 335  Q
    |||||| ||||| |||||||||||||| |||||||| || |||||||| ||||    
T  5654606 tgattacattgaattatgtcattttctcaaattattatcagtgtcgacatgtc 5654658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 328
Target Start/End: Complemental strand, 43368138 - 43368078
Alignment:
Q  268 cgacaccaacacatgtgattatattgacttatgtcattttctaaaattattttcggtgtcg 328  Q
    |||||||||||||| |||| ||||| |  | ||||||||||| |||||||| |||||||||    
T  43368138 cgacaccaacacatatgatcatattaaactgtgtcattttcttaaattattatcggtgtcg 43368078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 33; Significance: 0.000000002; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 342
Target Start/End: Complemental strand, 21478740 - 21478668
Alignment:
Q  270 acaccaacacatgtgattatattgacttatgtcattttctaaaattattttcggtgtcgacgtgtcaatgtct 342  Q
    |||||||||||| |||||| ||||| ||||||||| || | |||||||| | ||||||||| |||| ||||||    
T  21478740 acaccaacacatatgattacattgatttatgtcatcttgtgaaattattattggtgtcgacatgtccatgtct 21478668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 341
Target Start/End: Complemental strand, 39682944 - 39682870
Alignment:
Q  267 tcgacaccaacacatgtgattatattgacttatgtcattttctaaaattattttcggtgtcgacgtgtcaatgtc 341  Q
    ||||||||||||||| ||||||| ||||  |||| |||||| | |||||||| || ||||| |||||||| ||||    
T  39682944 tcgacaccaacacatatgattatgttgaactatgacatttttttaaattattatccgtgtccacgtgtcagtgtc 39682870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 335
Target Start/End: Original strand, 34409352 - 34409409
Alignment:
Q  278 acatgtgattatattgacttatgtcattttctaaaattattttcggtgtcgacgtgtc 335  Q
    ||||||||||| ||||| ||||||||||||||  || |||| ||||||| ||||||||    
T  34409352 acatgtgattacattgaattatgtcattttctcgaagtattatcggtgttgacgtgtc 34409409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 270 - 341
Target Start/End: Original strand, 18110 - 18181
Alignment:
Q  270 acaccaacacatgtgattatattgacttatgtcattttctaaaattattttcggtgtcgacgtgtcaatgtc 341  Q
    |||||||||| || ||||| ||||| |||||| ||||||| ||| | || ||||||||||||||||| ||||    
T  18110 acaccaacacttgcgattacattgaattatgttattttctcaaaattttatcggtgtcgacgtgtcagtgtc 18181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University