View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5224_high_20 (Length: 306)
Name: NF5224_high_20
Description: NF5224
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5224_high_20 |
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Alignment Details
Target: chr6 (Bit Score: 276; Significance: 1e-154; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 1 - 292
Target Start/End: Complemental strand, 14513508 - 14513217
Alignment:
| Q |
1 |
aatcttaatatcactacaatatttccttcacctactcatccaaatgttgcactctcacatacaccacaatcaccaatttctcttcacaaacctcccaatt |
100 |
Q |
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| T |
14513508 |
aatcttaatatcactacaatatttccttcacctactcatccaaatgttgcactctcacttacaccacaatcaccaatttctcttcacaaacctcccaatt |
14513409 |
T |
|
| Q |
101 |
tccttaacaacccaccacttttcttcaccatctcctcttcataaatttcatcataattctcactctatttatgccattaatccttctcaagaagtatttt |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
14513408 |
tccttaacaacccaccacttttcttcaccatctcctcttcataaatttcatcataattctcacactatttatgccattaatccttctcaagaagtatttt |
14513309 |
T |
|
| Q |
201 |
taccgttgctaaataaattaaccactgcaaaagtggaattaagccctatttttgatgctatagatgactcttcttcaaaccaagtaactatc |
292 |
Q |
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||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
14513308 |
taccgttgctaaataaattaatcactgcaaaagtggaattaagccctatttttgatgctatagatgagtcttcttcaaaccaagtaactatc |
14513217 |
T |
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