View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5226-Insertion-5 (Length: 184)
Name: NF5226-Insertion-5
Description: NF5226
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5226-Insertion-5 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 173; Significance: 3e-93; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 173; E-Value: 3e-93
Query Start/End: Original strand, 8 - 184
Target Start/End: Complemental strand, 35899674 - 35899498
Alignment:
| Q |
8 |
gatttatttactgatttcgttgttttctcgtttgaagttaacatggctggactacaagaaaagctgaagaaactaagtatgaagcctggagtttggtcga |
107 |
Q |
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| T |
35899674 |
gatttatttactgatttcgttgttttctcgtttgaagttaacatggctggactacaagaaaagctgaagaaactaagtatgaagcctggagtttggtcga |
35899575 |
T |
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| Q |
108 |
ctgggtcaaagaggaaggaccctcgcagtctcaacgcgctcttggctagggctacaggctcatcttctcaggtcggc |
184 |
Q |
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|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35899574 |
ctgggtcaaagaggaaggaccctcgcggtctcaacgcgctcttggctagggctacaggctcatcttctcaggtcggc |
35899498 |
T |
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