View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5226_high_5 (Length: 481)

Name: NF5226_high_5
Description: NF5226
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5226_high_5
NF5226_high_5
[»] chr4 (80 HSPs)
chr4 (1-447)||(31601162-31601610)
chr4 (168-447)||(23067654-23067932)
chr4 (168-447)||(46716700-46716978)
chr4 (165-447)||(9474345-9474626)
chr4 (185-447)||(4634330-4634591)
chr4 (168-447)||(9661883-9662161)
chr4 (185-447)||(14542318-14542579)
chr4 (168-447)||(42972068-42972346)
chr4 (195-447)||(32189040-32189287)
chr4 (183-447)||(20961496-20961756)
chr4 (168-447)||(37869223-37869501)
chr4 (168-447)||(41486605-41486883)
chr4 (196-447)||(30469929-30470175)
chr4 (185-447)||(34115462-34115719)
chr4 (183-447)||(46728726-46728989)
chr4 (233-440)||(50002989-50003196)
chr4 (271-446)||(54420547-54420723)
chr4 (168-399)||(12519686-12519916)
chr4 (183-447)||(15729787-15730050)
chr4 (168-447)||(38434628-38434906)
chr4 (183-447)||(43156821-43157085)
chr4 (168-447)||(51646123-51646405)
chr4 (196-447)||(44375081-44375320)
chr4 (279-447)||(52555546-52555714)
chr4 (267-449)||(29474132-29474314)
chr4 (168-446)||(29589168-29589445)
chr4 (271-447)||(53903713-53903887)
chr4 (195-446)||(1124999-1125248)
chr4 (168-447)||(16991902-16992180)
chr4 (168-399)||(28990328-28990558)
chr4 (256-447)||(14346548-14346739)
chr4 (185-385)||(2945184-2945383)
chr4 (171-447)||(38169966-38170239)
chr4 (168-447)||(46775664-46775940)
chr4 (185-399)||(44021435-44021638)
chr4 (170-447)||(1657372-1657648)
chr4 (243-405)||(30416441-30416603)
chr4 (195-399)||(7242623-7242826)
chr4 (233-399)||(6789730-6789896)
chr4 (255-399)||(3169542-3169686)
chr4 (247-447)||(26576309-26576508)
chr4 (238-439)||(4959388-4959588)
chr4 (233-424)||(1645384-1645570)
chr4 (293-443)||(9549594-9549743)
chr4 (241-410)||(46386617-46386786)
chr4 (199-410)||(4622552-4622763)
chr4 (238-447)||(29576927-29577137)
chr4 (243-361)||(40859778-40859896)
chr4 (313-447)||(23926215-23926349)
chr4 (234-447)||(33020733-33020944)
chr4 (170-353)||(6408472-6408657)
chr4 (30-128)||(31599595-31599693)
chr4 (241-446)||(35658338-35658542)
chr4 (183-289)||(40859691-40859796)
chr4 (338-447)||(11817255-11817364)
chr4 (183-297)||(30416577-30416690)
chr4 (239-399)||(29257325-29257485)
chr4 (318-399)||(31311647-31311728)
chr4 (362-447)||(50981520-50981605)
chr4 (356-452)||(5814563-5814659)
chr4 (28-112)||(31599493-31599578)
chr4 (168-265)||(53903640-53903735)
chr4 (333-424)||(38545914-38546005)
chr4 (168-265)||(54420701-54420796)
chr4 (167-271)||(9549496-9549599)
chr4 (330-395)||(5388706-5388771)
chr4 (170-223)||(9526368-9526421)
chr4 (329-374)||(10665748-10665793)
chr4 (329-374)||(10710242-10710287)
chr4 (329-374)||(10879893-10879938)
chr4 (329-374)||(10924012-10924057)
chr4 (356-411)||(8712747-8712802)
chr4 (246-405)||(47466012-47466170)
chr4 (168-219)||(52555754-52555805)
chr4 (370-452)||(7060560-7060642)
chr4 (183-225)||(29474381-29474423)
chr4 (329-374)||(17219943-17219988)
chr4 (329-374)||(22066967-22067012)
chr4 (234-307)||(36804503-36804576)
chr4 (239-288)||(38546023-38546072)
[»] chr1 (68 HSPs)
chr1 (168-457)||(5832263-5832552)
chr1 (168-447)||(630590-630869)
chr1 (185-447)||(22344718-22344979)
chr1 (168-447)||(44562555-44562833)
chr1 (168-447)||(21326503-21326781)
chr1 (168-447)||(4564548-4564824)
chr1 (172-447)||(15276252-15276530)
chr1 (185-447)||(23257135-23257396)
chr1 (166-447)||(15698228-15698506)
chr1 (233-447)||(38644603-38644817)
chr1 (190-447)||(38646636-38646892)
chr1 (233-447)||(12967539-12967752)
chr1 (185-447)||(36621399-36621659)
chr1 (168-377)||(23320470-23320678)
chr1 (233-446)||(28213142-28213354)
chr1 (271-447)||(6212720-6212896)
chr1 (271-439)||(14717084-14717252)
chr1 (271-447)||(45659146-45659322)
chr1 (167-447)||(8893322-8893600)
chr1 (183-447)||(33703316-33703578)
chr1 (199-447)||(27469514-27469761)
chr1 (168-447)||(12147854-12148132)
chr1 (233-447)||(49651938-49652143)
chr1 (234-447)||(11121071-11121284)
chr1 (186-447)||(52839578-52839838)
chr1 (280-447)||(44513808-44513975)
chr1 (256-399)||(10264826-10264969)
chr1 (233-447)||(26199674-26199888)
chr1 (257-399)||(48654895-48655037)
chr1 (195-380)||(32539062-32539247)
chr1 (168-447)||(33177404-33177680)
chr1 (168-309)||(1767996-1768135)
chr1 (271-417)||(900226-900371)
chr1 (234-447)||(2350717-2350930)
chr1 (168-380)||(10877376-10877587)
chr1 (239-399)||(13969494-13969657)
chr1 (166-374)||(29067078-29067284)
chr1 (234-447)||(13691569-13691777)
chr1 (234-399)||(37684944-37685109)
chr1 (234-399)||(37700408-37700573)
chr1 (271-447)||(46589279-46589456)
chr1 (259-395)||(47392258-47392392)
chr1 (185-309)||(40488341-40488464)
chr1 (189-380)||(22031964-22032153)
chr1 (271-447)||(40992440-40992606)
chr1 (234-387)||(34566783-34566934)
chr1 (168-265)||(14717230-14717327)
chr1 (356-452)||(47551312-47551408)
chr1 (168-268)||(45659072-45659171)
chr1 (233-296)||(52752117-52752180)
chr1 (367-447)||(1768155-1768235)
chr1 (327-447)||(34659447-34659567)
chr1 (355-447)||(26771322-26771414)
chr1 (356-455)||(12871838-12871937)
chr1 (357-431)||(11877280-11877354)
chr1 (185-296)||(30853746-30853849)
chr1 (168-265)||(40992364-40992462)
chr1 (168-221)||(6212917-6212970)
chr1 (168-225)||(35077917-35077974)
chr1 (168-225)||(49651865-49651922)
chr1 (195-253)||(900179-900236)
chr1 (183-223)||(26199638-26199677)
chr1 (168-214)||(17579798-17579844)
chr1 (356-397)||(29938454-29938495)
chr1 (356-424)||(13152657-13152725)
chr1 (332-380)||(37662403-37662451)
chr1 (183-223)||(44514018-44514058)
chr1 (168-220)||(46589205-46589256)
[»] chr2 (73 HSPs)
chr2 (168-447)||(7640162-7640440)
chr2 (185-445)||(27023947-27024206)
chr2 (185-447)||(25771492-25771753)
chr2 (168-447)||(25516524-25516800)
chr2 (168-447)||(43566905-43567181)
chr2 (183-447)||(38822120-38822380)
chr2 (168-447)||(44167517-44167793)
chr2 (168-447)||(27191139-27191419)
chr2 (168-447)||(27840953-27841233)
chr2 (168-447)||(5930453-5930731)
chr2 (185-447)||(3390479-3390731)
chr2 (233-447)||(36508024-36508237)
chr2 (168-439)||(6089923-6090190)
chr2 (196-447)||(3603043-3603293)
chr2 (246-447)||(43929106-43929307)
chr2 (168-447)||(41176892-41177166)
chr2 (271-447)||(3465061-3465237)
chr2 (185-367)||(16879851-16880032)
chr2 (185-367)||(16991984-16992165)
chr2 (242-379)||(44951522-44951659)
chr2 (170-447)||(25622850-25623127)
chr2 (183-447)||(7443372-7443635)
chr2 (243-447)||(16720654-16720858)
chr2 (168-447)||(19580808-19581087)
chr2 (189-447)||(9715350-9715607)
chr2 (243-443)||(10589199-10589399)
chr2 (170-447)||(26491335-26491609)
chr2 (168-431)||(29734219-29734482)
chr2 (234-447)||(5071176-5071389)
chr2 (168-384)||(19953600-19953814)
chr2 (234-447)||(2251153-2251364)
chr2 (168-447)||(37883683-37883961)
chr2 (246-447)||(4878542-4878743)
chr2 (183-447)||(15673774-15674030)
chr2 (168-438)||(29812430-29812699)
chr2 (196-446)||(13268631-13268879)
chr2 (170-309)||(41841982-41842118)
chr2 (238-379)||(24500586-24500727)
chr2 (233-395)||(28228316-28228478)
chr2 (238-441)||(35353742-35353942)
chr2 (238-446)||(3397786-3397994)
chr2 (260-399)||(11550449-11550589)
chr2 (185-379)||(25237205-25237393)
chr2 (367-447)||(18141287-18141367)
chr2 (168-345)||(40125419-40125595)
chr2 (168-289)||(43929320-43929440)
chr2 (291-420)||(20036534-20036663)
chr2 (168-443)||(42105576-42105836)
chr2 (329-447)||(31125185-31125303)
chr2 (241-397)||(17068772-17068927)
chr2 (256-397)||(17118670-17118810)
chr2 (241-397)||(17074769-17074924)
chr2 (183-225)||(10589084-10589126)
chr2 (331-447)||(12366060-12366176)
chr2 (185-225)||(34480003-34480043)
chr2 (371-447)||(34480197-34480273)
chr2 (169-265)||(3464990-3465083)
chr2 (356-455)||(15920091-15920190)
chr2 (327-441)||(802900-803014)
chr2 (409-447)||(9207162-9207200)
chr2 (271-441)||(38105355-38105525)
chr2 (243-289)||(43929292-43929338)
chr2 (356-441)||(34471183-34471268)
chr2 (241-385)||(17095354-17095497)
chr2 (239-286)||(16720871-16720918)
chr2 (370-441)||(35333742-35333813)
chr2 (168-223)||(44441416-44441471)
chr2 (259-297)||(10589187-10589225)
chr2 (238-288)||(31269060-31269110)
chr2 (233-310)||(44562574-44562649)
chr2 (328-385)||(12183200-12183257)
chr2 (233-281)||(11931008-11931056)
chr2 (325-373)||(45033149-45033197)
[»] chr7 (67 HSPs)
chr7 (185-447)||(40775314-40775575)
chr7 (168-447)||(26017464-26017742)
chr7 (168-446)||(30992630-30992907)
chr7 (168-447)||(7985922-7986200)
chr7 (168-447)||(47749764-47750042)
chr7 (168-447)||(8611430-8611706)
chr7 (168-447)||(49166957-49167233)
chr7 (168-447)||(134951-135229)
chr7 (172-447)||(11001880-11002151)
chr7 (168-447)||(42490732-42491011)
chr7 (168-446)||(43806957-43807234)
chr7 (170-447)||(40476741-40477015)
chr7 (185-444)||(8319362-8319620)
chr7 (168-444)||(24475373-24475657)
chr7 (168-444)||(24470425-24470709)
chr7 (183-447)||(47156439-47156693)
chr7 (168-399)||(23732247-23732477)
chr7 (183-447)||(28015402-28015665)
chr7 (168-380)||(25855093-25855304)
chr7 (271-447)||(37399730-37399906)
chr7 (238-447)||(772542-772751)
chr7 (168-447)||(44681491-44681768)
chr7 (183-447)||(5024862-5025124)
chr7 (183-399)||(9933892-9934103)
chr7 (291-447)||(19895490-19895646)
chr7 (183-447)||(43483645-43483896)
chr7 (168-345)||(13008581-13008757)
chr7 (195-399)||(23177437-23177639)
chr7 (234-447)||(29804485-29804694)
chr7 (271-447)||(39090220-39090396)
chr7 (183-446)||(38649165-38649426)
chr7 (185-379)||(46918448-46918639)
chr7 (233-379)||(14707677-14707823)
chr7 (256-373)||(24045160-24045278)
chr7 (330-447)||(2532132-2532249)
chr7 (168-380)||(10250356-10250565)
chr7 (195-447)||(33530281-33530525)
chr7 (271-447)||(41748333-41748509)
chr7 (238-447)||(21552261-21552470)
chr7 (167-367)||(22751468-22751666)
chr7 (334-447)||(45949485-45949598)
chr7 (329-399)||(21329152-21329222)
chr7 (234-396)||(32312662-32312824)
chr7 (234-302)||(14734000-14734068)
chr7 (185-310)||(15123923-15124047)
chr7 (256-397)||(34893228-34893367)
chr7 (168-224)||(39090145-39090202)
chr7 (238-402)||(34594373-34594537)
chr7 (168-269)||(35661554-35661654)
chr7 (271-399)||(36350300-36350428)
chr7 (238-381)||(43098676-43098819)
chr7 (167-399)||(35135038-35135268)
chr7 (356-447)||(16273599-16273690)
chr7 (168-223)||(37399656-37399711)
chr7 (291-397)||(37890345-37890451)
chr7 (369-431)||(40657840-40657902)
chr7 (189-319)||(35141685-35141814)
chr7 (239-295)||(35363024-35363080)
chr7 (356-424)||(39707501-39707569)
chr7 (356-447)||(14733871-14733962)
chr7 (238-296)||(1749225-1749282)
chr7 (356-455)||(4621170-4621271)
chr7 (185-223)||(19895680-19895718)
chr7 (236-289)||(16263484-16263537)
chr7 (342-447)||(35362913-35363018)
chr7 (360-444)||(22379518-22379602)
chr7 (363-455)||(38277068-38277160)
[»] chr8 (62 HSPs)
chr8 (185-447)||(44295363-44295624)
chr8 (168-447)||(8054614-8054892)
chr8 (168-447)||(41996575-41996851)
chr8 (190-447)||(37129481-37129733)
chr8 (233-447)||(5457165-5457379)
chr8 (168-447)||(9992695-9992974)
chr8 (168-447)||(9270051-9270329)
chr8 (168-446)||(32104644-32104922)
chr8 (185-447)||(32412837-32413098)
chr8 (168-447)||(16996695-16996970)
chr8 (233-447)||(14115634-14115848)
chr8 (168-446)||(36545588-36545865)
chr8 (168-447)||(31874114-31874388)
chr8 (168-447)||(16937145-16937423)
chr8 (168-445)||(32256529-32256805)
chr8 (168-379)||(5989660-5989870)
chr8 (183-399)||(37659011-37659226)
chr8 (234-447)||(12248517-12248733)
chr8 (168-441)||(7280941-7281211)
chr8 (168-447)||(2628944-2629218)
chr8 (186-447)||(10042820-10043080)
chr8 (280-446)||(5328095-5328256)
chr8 (182-447)||(3925496-3925759)
chr8 (167-422)||(7269297-7269549)
chr8 (234-446)||(32061889-32062101)
chr8 (246-447)||(31712882-31713083)
chr8 (185-447)||(5917555-5917808)
chr8 (168-379)||(26937555-26937765)
chr8 (168-437)||(15665569-15665837)
chr8 (238-447)||(12244022-12244231)
chr8 (170-380)||(13864391-13864600)
chr8 (291-444)||(13977560-13977713)
chr8 (233-397)||(17019212-17019376)
chr8 (233-397)||(17549649-17549813)
chr8 (170-447)||(23766772-23767047)
chr8 (292-447)||(37719993-37720148)
chr8 (168-395)||(3680953-3681168)
chr8 (189-447)||(16808928-16809171)
chr8 (234-365)||(14327574-14327705)
chr8 (234-436)||(1215158-1215358)
chr8 (256-448)||(11298567-11298757)
chr8 (234-388)||(18190711-18190863)
chr8 (297-399)||(31147682-31147787)
chr8 (330-447)||(27534218-27534335)
chr8 (233-307)||(6833574-6833648)
chr8 (185-438)||(16938092-16938338)
chr8 (356-449)||(18196950-18197043)
chr8 (338-399)||(32920843-32920904)
chr8 (233-411)||(26582734-26582908)
chr8 (186-268)||(31147786-31147867)
chr8 (320-380)||(36261137-36261197)
chr8 (346-399)||(283842-283895)
chr8 (346-399)||(631982-632035)
chr8 (346-399)||(817794-817847)
chr8 (329-446)||(14919197-14919313)
chr8 (361-441)||(14530728-14530808)
chr8 (370-441)||(14600519-14600590)
chr8 (238-296)||(18890775-18890832)
chr8 (234-296)||(32920747-32920809)
chr8 (168-217)||(15237672-15237721)
chr8 (262-338)||(3028176-3028252)
chr8 (186-222)||(7954525-7954561)
[»] chr3 (60 HSPs)
chr3 (185-447)||(43029730-43029991)
chr3 (168-447)||(1165202-1165480)
chr3 (172-447)||(28995115-28995386)
chr3 (168-447)||(3088470-3088746)
chr3 (168-447)||(22286557-22286833)
chr3 (168-447)||(43839323-43839602)
chr3 (168-447)||(41882216-41882492)
chr3 (168-447)||(21803560-21803839)
chr3 (202-446)||(45664285-45664528)
chr3 (202-447)||(54240150-54240394)
chr3 (168-447)||(47914399-47914676)
chr3 (168-447)||(50519820-50520091)
chr3 (170-447)||(33977731-33978005)
chr3 (168-447)||(29182416-29182692)
chr3 (168-447)||(20200864-20201142)
chr3 (168-447)||(20203046-20203324)
chr3 (168-446)||(35501566-35501843)
chr3 (241-443)||(7656330-7656527)
chr3 (185-447)||(32237802-32238062)
chr3 (274-447)||(11846684-11846856)
chr3 (167-446)||(20251681-20251964)
chr3 (183-447)||(913122-913385)
chr3 (168-344)||(14741234-14741409)
chr3 (189-447)||(21585950-21586207)
chr3 (195-447)||(32089737-32089987)
chr3 (183-447)||(40797078-40797341)
chr3 (238-447)||(22844151-22844360)
chr3 (305-445)||(33076451-33076591)
chr3 (168-380)||(29776563-29776772)
chr3 (185-447)||(53426845-53427106)
chr3 (185-441)||(22893526-22893783)
chr3 (167-399)||(36540528-36540756)
chr3 (238-399)||(4019694-4019858)
chr3 (195-447)||(39340256-39340507)
chr3 (168-447)||(34767009-34767294)
chr3 (238-380)||(25939352-25939494)
chr3 (168-399)||(25373936-25374154)
chr3 (168-343)||(40461905-40462079)
chr3 (244-447)||(42106245-42106446)
chr3 (369-447)||(10977473-10977551)
chr3 (329-447)||(37051784-37051902)
chr3 (270-380)||(2598210-2598319)
chr3 (185-447)||(50460239-50460498)
chr3 (293-449)||(27831253-27831409)
chr3 (234-385)||(43242902-43243054)
chr3 (293-447)||(26412442-26412598)
chr3 (183-297)||(42106157-42106270)
chr3 (238-310)||(1220190-1220262)
chr3 (313-399)||(33793940-33794026)
chr3 (313-379)||(48060963-48061029)
chr3 (202-388)||(40365290-40365474)
chr3 (407-447)||(14741188-14741228)
chr3 (238-385)||(33069755-33069900)
chr3 (329-381)||(35670603-35670655)
chr3 (370-441)||(4081945-4082016)
chr3 (370-441)||(53402858-53402929)
chr3 (187-225)||(26412381-26412419)
chr3 (234-295)||(21085900-21085961)
chr3 (370-455)||(31462553-31462638)
chr3 (168-225)||(33076342-33076399)
[»] scaffold0316 (1 HSPs)
scaffold0316 (185-447)||(12009-12270)
[»] chr5 (53 HSPs)
chr5 (185-447)||(31645876-31646137)
chr5 (168-447)||(29310160-29310433)
chr5 (172-447)||(4070588-4070859)
chr5 (185-447)||(6886984-6887245)
chr5 (170-443)||(4726738-4727010)
chr5 (168-447)||(28618634-28618910)
chr5 (168-447)||(5378332-5378610)
chr5 (197-443)||(10923944-10924188)
chr5 (233-447)||(9034748-9034962)
chr5 (167-441)||(2415429-2415702)
chr5 (168-443)||(41063206-41063480)
chr5 (183-447)||(41554532-41554795)
chr5 (271-447)||(35906401-35906577)
chr5 (236-447)||(20270811-20271022)
chr5 (183-447)||(33486375-33486638)
chr5 (168-443)||(19645852-19646125)
chr5 (168-446)||(22397359-22397632)
chr5 (183-447)||(18472532-18472793)
chr5 (238-447)||(40774859-40775069)
chr5 (183-447)||(8811958-8812220)
chr5 (238-447)||(6647719-6647928)
chr5 (183-447)||(34843961-34844224)
chr5 (168-431)||(15710572-15710833)
chr5 (234-447)||(40564963-40565174)
chr5 (183-447)||(14910482-14910733)
chr5 (275-447)||(28500825-28500997)
chr5 (237-439)||(6074550-6074752)
chr5 (168-398)||(32390502-32390731)
chr5 (167-397)||(34873890-34874119)
chr5 (246-439)||(37425131-37425319)
chr5 (238-446)||(13007791-13007998)
chr5 (238-447)||(20146025-20146231)
chr5 (168-443)||(41358069-41358333)
chr5 (260-441)||(8957327-8957508)
chr5 (238-395)||(13079244-13079400)
chr5 (259-447)||(28388914-28389103)
chr5 (274-375)||(34893822-34893923)
chr5 (238-375)||(41988251-41988388)
chr5 (275-447)||(29154356-29154528)
chr5 (262-447)||(32387588-32387772)
chr5 (168-447)||(34866457-34866739)
chr5 (183-297)||(37425041-37425154)
chr5 (185-282)||(28423774-28423870)
chr5 (329-447)||(17325468-17325586)
chr5 (332-395)||(12524522-12524585)
chr5 (238-446)||(13080252-13080461)
chr5 (185-225)||(28500764-28500804)
chr5 (370-441)||(2555163-2555234)
chr5 (168-223)||(29154285-29154339)
chr5 (362-399)||(42512844-42512881)
chr5 (357-397)||(24288802-24288842)
chr5 (357-397)||(24373380-24373420)
chr5 (356-452)||(25962136-25962232)
[»] chr6 (37 HSPs)
chr6 (168-447)||(23843230-23843508)
chr6 (167-447)||(13233914-13234193)
chr6 (168-447)||(12576287-12576562)
chr6 (168-447)||(20845038-20845316)
chr6 (168-444)||(19759818-19760093)
chr6 (172-438)||(11425978-11426240)
chr6 (168-447)||(8633002-8633273)
chr6 (168-428)||(32457676-32457934)
chr6 (185-447)||(7049293-7049553)
chr6 (168-447)||(16913358-16913633)
chr6 (168-437)||(548682-548949)
chr6 (168-447)||(31747988-31748265)
chr6 (234-447)||(10744678-10744890)
chr6 (188-447)||(32804345-32804603)
chr6 (185-394)||(8644292-8644500)
chr6 (168-380)||(4663693-4663904)
chr6 (168-397)||(1944126-1944354)
chr6 (195-447)||(12652007-12652257)
chr6 (278-447)||(20496332-20496501)
chr6 (189-447)||(5544759-5545015)
chr6 (233-310)||(5417141-5417218)
chr6 (266-399)||(15127983-15128116)
chr6 (347-446)||(5417031-5417130)
chr6 (271-380)||(31804352-31804461)
chr6 (233-287)||(15128119-15128173)
chr6 (234-439)||(33541345-33541548)
chr6 (233-345)||(33194699-33194811)
chr6 (334-441)||(8694089-8694196)
chr6 (238-380)||(22530379-22530520)
chr6 (337-446)||(892482-892591)
chr6 (257-370)||(904386-904499)
chr6 (242-397)||(34020708-34020861)
chr6 (368-455)||(12654108-12654195)
chr6 (238-296)||(1523363-1523420)
chr6 (185-223)||(20745073-20745111)
chr6 (195-225)||(31804305-31804335)
chr6 (239-287)||(32574536-32574584)
[»] scaffold0722 (1 HSPs)
scaffold0722 (170-447)||(5332-5608)
[»] scaffold0024 (1 HSPs)
scaffold0024 (167-447)||(36558-36832)
[»] scaffold0012 (1 HSPs)
scaffold0012 (168-429)||(244666-244926)
[»] scaffold0045 (1 HSPs)
scaffold0045 (168-447)||(9464-9732)
[»] scaffold0665 (1 HSPs)
scaffold0665 (233-399)||(981-1147)
[»] scaffold0157 (1 HSPs)
scaffold0157 (168-399)||(995-1225)
[»] scaffold0011 (1 HSPs)
scaffold0011 (168-427)||(11049-11302)
[»] scaffold0340 (1 HSPs)
scaffold0340 (168-447)||(11582-11861)
[»] scaffold0018 (1 HSPs)
scaffold0018 (167-442)||(136885-137144)
[»] scaffold1294 (2 HSPs)
scaffold1294 (324-447)||(959-1083)
scaffold1294 (168-225)||(810-867)
[»] scaffold0627 (1 HSPs)
scaffold0627 (233-399)||(6641-6805)
[»] scaffold0150 (1 HSPs)
scaffold0150 (233-380)||(10184-10331)
[»] scaffold0112 (1 HSPs)
scaffold0112 (329-447)||(25318-25436)
[»] scaffold0009 (1 HSPs)
scaffold0009 (363-447)||(105264-105348)
[»] scaffold0999 (1 HSPs)
scaffold0999 (356-424)||(1921-1989)
[»] scaffold0432 (1 HSPs)
scaffold0432 (356-441)||(2255-2340)
[»] scaffold0155 (1 HSPs)
scaffold0155 (370-455)||(35321-35406)


Alignment Details
Target: chr4 (Bit Score: 360; Significance: 0; HSPs: 80)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 360; E-Value: 0
Query Start/End: Original strand, 1 - 447
Target Start/End: Complemental strand, 31601610 - 31601162
Alignment:
Q  1 gaaagaatataaaatgttgaatggagtatatcattattgtgataggaagaatattaatttggnnnnnnnttatctttggacattatacacctcataaaat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||    
T  31601610 gaaagaatataaaatgttgaatggagtatatcattattgtgataggaagaatattaatttggaaaataattatctttggacattatacacctcataaaat 31601511  T
Q  101 cgagggagaaatatcatctttggacattggtttgtcacatctattttcacatctactttgtcgcatttctaactcgttttgttatttccctttaattgaa 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||    
T  31601510 cgagggagaaatatcatctttggacattggtttgtcacatctattttcacatctactttgtcgtatttctaactcgttttgctatttcccttttattgaa 31601411  T
Q  201 ataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttct 300  Q
    |||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  31601410 ataagtgattttcacatctatttcgtttttttattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttatct 31601311  T
Q  301 ttcttgtttctctcagg--tatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcag 398  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  31601310 ttcttgtttctctcaggtatatttgattggttcagattgtcagatcaacttcgatccagtgcagatccaatcaatgactttgacgtcatccacgttgcag 31601211  T
Q  399 acccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||||||| ||||||||||| ||||||||||||| |||| ||||||||||    
T  31601210 acccagagacatggttatttcggagatttaaatatagttatatgtgtag 31601162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 178; E-Value: 8e-96
Query Start/End: Original strand, 168 - 447
Target Start/End: Complemental strand, 23067932 - 23067654
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    |||||||||||||  ||||||||||| ||||||||||||||||||||||||| || ||       |||||||||||||||||||||| ||||||||||||    
T  23067932 tctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgtttttt-attttgtgatttcgtcgtcttcgtgcgacgttggt 23067834  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| |||||||||||||    
T  23067833 ttgttcgtcgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagattgtcagatcagcttcgatccagtgcagatcca 23067734  T
Q  368 atcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||||||||||||| ||||||||||||||||||  | || |||||| ||||||||| |||||||| |||||||||||||||    
T  23067733 atcaatgactttggcgtcatccacgttgcagattcggagacatggctattccggatatttaaatatagtcatatgtgtag 23067654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 168 - 447
Target Start/End: Complemental strand, 46716978 - 46716700
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    |||||||||||||  ||||| ||||| ||||||||||||||||||| |||||||| ||       |||||||||||||||| ||||| ||||||||||||    
T  46716978 tctaactcgtttttctattttccttttattgaaataagtgattttcgcatctattacgtttttt-attttgtgatttcgtcatcttcgtgcgacgttggt 46716880  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| |||||||||||||    
T  46716879 ttgttcgtcgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagattgtcagatcagcttcgatccagtgcagatcca 46716780  T
Q  368 atcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||||||||||||| |||||||||||||||||| || || | |||| |||||||||||||||||| |||||||||||||||    
T  46716779 atcaatgactttggcgtcatccacgttgcagatccggagatatggctattccggagatttaaatatagtcatatgtgtag 46716700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 173; E-Value: 8e-93
Query Start/End: Original strand, 165 - 447
Target Start/End: Complemental strand, 9474626 - 9474345
Alignment:
Q  165 atttctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgtt 264  Q
    ||||||||||| ||||  | ||||| ||| |||||||||||||||||||||||||||||||       |||||||||||||||||| ||| |||||||||    
T  9474626 atttctaactcatttttctctttcctttttattgaaataagtgattttcacatctatttcgtttttt-attttgtgatttcgtcgtattcgtgcgacgtt 9474528  T
Q  265 ggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagat 364  Q
    ||||||||||||||||||||||||| |||||| | |||||||||||||| ||||||||||||||||||||||||| ||||||||||||| ||||| ||||    
T  9474527 ggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgattggttcagattgtctgatcaacttcgatccagtgtagat 9474428  T
Q  365 ccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||||||||||||||||||||||||||| ||||||| || || |||||||||||||||| |||||||| |||||||||||||||    
T  9474427 ccaatcaatgactttgacgtcatccacattgcagatcctgagacatggttattccggatatttaaatatagtcatatgtgtag 9474345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 185 - 447
Target Start/End: Original strand, 4634330 - 4634591
Alignment:
Q  185 tttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgt 284  Q
    ||||||||| ||||||||||||||||||||||||||||| |       |||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  4634330 tttcccttttattgaaataagtgattttcacatctattttgttttttaattt-gtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgt 4634428  T
Q  285 gcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgt 384  Q
    ||||| |||||| | ||||||||||||||||||||||||||  |||||||||||||||||| ||||||| ||||||||||||||||||||||||||  ||    
T  4634429 gcgacgttgtttgtttttcttgtttctctcaggtatttgatcagttcagattgtcagatcagcttcgatccagtgcagatccaatcaatgactttggtgt 4634528  T
Q  385 catccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||||||||||||||| || ||||||||||||||||||| |||||||| |||||||||||||||    
T  4634529 catccacgttgcagatccggatacatggttattccggatatttaaatatagtcatatgtgtag 4634591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 168 - 447
Target Start/End: Original strand, 9661883 - 9662161
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    ||||||| |||||  | ||||||||| ||||||||||||||||||||||||||||| |       |||||||||||||||||||||| ||||||||||||    
T  9661883 tctaacttgtttttctttttcccttttattgaaataagtgattttcacatctattttgtttttt-attttgtgatttcgtcgtcttcgtgcgacgttggt 9661981  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    |||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||  ||||||||||| |||||| ||||||| |||||||||| ||    
T  9661982 ttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcagttcagattgttagatcagcttcgatccagtgcagatgca 9662081  T
Q  368 atcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||||||||||||| |||||||||||||||||| || ||||||||||||||| |||||||||||| |||||||||||||||    
T  9662082 atcaatgactttggcgtcatccacgttgcagatccggatacatggttattctggagatttaaatatagtcatatgtgtag 9662161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 185 - 447
Target Start/End: Complemental strand, 14542579 - 14542318
Alignment:
Q  185 tttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgt 284  Q
    ||||| ||| ||||||||||||||||||||||||||||| |       |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  14542579 tttcctttttattgaaataagtgattttcacatctattttgtttttt-attttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgt 14542481  T
Q  285 gcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgt 384  Q
    ||||| |||||| | ||||||||||||||||||||||||||  |||||||||||||||||| ||||||| ||||||||||||||||||||||||||  ||    
T  14542480 gcgacgttgtttgtttttcttgtttctctcaggtatttgatcagttcagattgtcagatcagcttcgatccagtgcagatccaatcaatgactttgttgt 14542381  T
Q  385 catccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||||||| ||||||| || |||||||||||||||||||||||||||| ||||||||| |||||    
T  14542380 catccactttgcagatccggatacatggttattccggagatttaaatatagtcatatatgtag 14542318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 168 - 447
Target Start/End: Original strand, 42972068 - 42972346
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    ||||||| |||||  |||||  |||| ||||||||||||||||||||||| | || ||       |||||||| ||||||||||||| ||||||||||||    
T  42972068 tctaacttgtttttctattttgcttttattgaaataagtgattttcacatttgttacgtttttt-attttgtggtttcgtcgtcttcgtgcgacgttggt 42972166  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    ||||||||||||||| |||||| || |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  42972167 ttgttcgtcgtctttatgcgacgttatttttctttcttgtttctctcaggtatttgatcggttcagattgtcagatcaacttcgatccagtgcagatcca 42972266  T
Q  368 atcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    |||||||||||||||||||||||||||||||| || || |||||  ||||||  |||||||||| |||||||||||||||    
T  42972267 atcaatgactttgacgtcatccacgttgcagatccggagacatgactattccaaagatttaaatatagtcatatgtgtag 42972346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 195 - 447
Target Start/End: Original strand, 32189040 - 32189287
Alignment:
Q  195 attgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgt 294  Q
    |||||||||||||||||||||||||||||||        ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  32189040 attgaaataagtgattttcacatctatttcgtttt----ttttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgt 32189135  T
Q  295 ttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgtt 394  Q
    || | ||||||||||||||||||| |||||||||||||||||||||||||| ||||||  |||||||||||||||||||||||||| |||||||||||||    
T  32189136 ttgtttttcttgtttctctcaggtgtttgattggttcagattgtcagatcagcttcga-ccagtgcagatccaatcaatgactttggcgtcatccacgtt 32189234  T
Q  395 gcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||||| |  || || || ||| ||||||||||||||| || ||||||||||||    
T  32189235 gcagatctggagacgtgtttactccggagatttaaatataatcatatgtgtag 32189287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 183 - 447
Target Start/End: Original strand, 20961496 - 20961756
Alignment:
Q  183 tatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtcttt 282  Q
    ||||||||||| |||||||||||||||||||||||||||||||       ||||||||||||| |||||||| ||||||||||||| ||||||| |||||    
T  20961496 tatttcccttttattgaaataagtgattttcacatctatttcgtttt---attttgtgatttcatcgtcttcgtgcgacgttggtt-gttcgtcatcttt 20961591  T
Q  283 gtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgac 382  Q
    || |||| ||| ||||   |||||||||||||||||||||||| | ||||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  20961592 gtacgacgttggtttttcgtcttgtttctctcaggtatttgatcgcttcagattgtcagatcaacttcgatccagtgcagattcaatcaatgactttgac 20961691  T
Q  383 gtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    |||||||||||||||||  | || ||||| ||||||||||||||||||| || ||||||||||||    
T  20961692 gtcatccacgttgcagatacggaaacatgattattccggagatttaaatatattcatatgtgtag 20961756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 168 - 447
Target Start/End: Complemental strand, 37869501 - 37869223
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    |||||||||||||  | ||||||||| |||||||||||||||||||||||||||||         ||| |||||||| ||||||||||||||||||||||    
T  37869501 tctaactcgtttttatctttcccttttattgaaataagtgattttcacatctatttt-attttgtattatgtgattttgtcgtcttcttgcgacgttggt 37869403  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    ||||| || ||||||||||||| || ||| | |||||||||||||| |||||||||||  |||||||||||||||||| ||||||| ||||||| |||||    
T  37869402 ttgtttgttgtctttgtgcgacgttatttatttttcttgtttctctaaggtatttgatcagttcagattgtcagatcagcttcgatccagtgcaaatcca 37869303  T
Q  368 atcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||||||||||||| |||||||||||||||||| ||  | |||||||||| |||||||||||||| |||||||||||||||    
T  37869302 atcaatgactttggcgtcatccacgttgcagatccgaagacatggttatcccggagatttaaatatagtcatatgtgtag 37869223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 168 - 447
Target Start/End: Original strand, 41486605 - 41486883
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    |||||||||||||  | ||||||||  ||||||||||| |||||||||||||||||||       |||||||||||| ||||||||  ||||| ||||||    
T  41486605 tctaactcgtttttctctttcccttatattgaaataagagattttcacatctatttcgtttttt-attttgtgattttgtcgtctttgtgcgatgttggt 41486703  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    ||||||||||||||||||| || |||||| | ||||||||||||||||| |||||||| |||||||||||||| || | ||||||| ||||||| |||||    
T  41486704 ttgttcgtcgtctttgtgcaacgttgtttgtttttcttgtttctctcagctatttgatcggttcagattgtcaaattagcttcgatacagtgcaaatcca 41486803  T
Q  368 atcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||||||||||||| |||||||||||||||||| |  || ||||||||||||||||||| ||||| |||||||||||||||    
T  41486804 atcaatgactttggcgtcatccacgttgcagatctggagacatggttattccggagatctaaatctagtcatatgtgtag 41486883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 196 - 447
Target Start/End: Complemental strand, 30470175 - 30469929
Alignment:
Q  196 ttgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtt 295  Q
    |||||||||||||||||||||| ||||| |       ||||||||||| |||||||||| ||||||||||||| ||| |||||||||||||||| |||||    
T  30470175 ttgaaataagtgattttcacatatattttgtttt---attttgtgatt-cgtcgtcttcgtgcgacgttggtt-gtttgtcgtctttgtgcgacgttgtt 30470081  T
Q  296 tttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttg 395  Q
    | | ||||||||||||||||||| |||||| | ||||||||||||||||| |||||||  ||||||||||||||||||||||||| ||||||||||||||    
T  30470080 tgtttttcttgtttctctcaggtgtttgatcgcttcagattgtcagatcagcttcgatctagtgcagatccaatcaatgactttggcgtcatccacgttg 30469981  T
Q  396 cagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    |||| || || ||||||||||||||||||||||||| |||||||||||||||    
T  30469980 cagatccggaaacatggttattccggagatttaaatatagtcatatgtgtag 30469929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 185 - 447
Target Start/End: Complemental strand, 34115719 - 34115462
Alignment:
Q  185 tttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgt 284  Q
    ||||||||| ||||||| |||||||||| | ||||||||||       |||||||||||||||||||||| |||||||||||| ||||||| ||||||||    
T  34115719 tttcccttttattgaaagaagtgatttttatatctatttcgtttttttattttgtgatttcgtcgtcttcgtgcgacgttggtatgttcgttgtctttgt 34115620  T
Q  285 gcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgt 384  Q
    ||||| || |||||     |||||||||| ||||||||||| ||||||||||||||||||| |||| || ||||| ||||||||||||||| |||| |||    
T  34115619 gcgacgtttttttt-----ttgtttctcttaggtatttgatcggttcagattgtcagatcagcttcaatccagtgtagatccaatcaatgattttggcgt 34115525  T
Q  385 catccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    |||| |||||||||| || || ||||||||||||||||||||||||| |||||||||||||||    
T  34115524 catcaacgttgcagatccggagacatggttattccggagatttaaatatagtcatatgtgtag 34115462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 183 - 447
Target Start/End: Complemental strand, 46728989 - 46728726
Alignment:
Q  183 tatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtcttt 282  Q
    ||||||||||| ||||||||||||||||| ||| |||||||||        ||||||||||||||||||||  |||||| ||| ||||||||||||||||    
T  46728989 tatttcccttttattgaaataagtgatttacacgtctatttcgtttcttt-ttttgtgatttcgtcgtcttagtgcgaccttgttttgttcgtcgtcttt 46728891  T
Q  283 gtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgac 382  Q
    || |||| ||||||  ||||||||||||  ||||||||||| | ||||||||||||||||||| ||||||| ||||||||||| |||||||||||||||     
T  46728890 gtacgacgttgtttgcctttcttgtttcgttcaggtatttgttcggttcagattgtcagatcagcttcgatccagtgcagatcaaatcaatgactttgaa 46728791  T
Q  383 gtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||| || |||||||| |  | || |||||| |||||| |||| |||||| |||||||||||||||    
T  46728790 gtcgtcaacgttgcaaattcggagacatgggtattccagagacttaaatatagtcatatgtgtag 46728726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 233 - 440
Target Start/End: Complemental strand, 50003196 - 50002989
Alignment:
Q  233 attttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttca 332  Q
    |||||||||||||||||||||| ||||||||||||||||||  ||||||||||||||  ||||| |||||||||||||||||||||||| |||| || ||    
T  50003196 attttgtgatttcgtcgtcttcgtgcgacgttggtttgttcaccgtctttgtgcgacgatgtttgtctttcttgtttctctcaggtattagattagtcca 50003097  T
Q  333 gattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatg 432  Q
    ||||||||||||| ||||||| ||||||| || ||||||| ||||||| ||| ||| ||||| ||||  |||| |||||||||||||| ||||||||||     
T  50003096 gattgtcagatcagcttcgatccagtgcaaattcaatcaacgactttggcgttatcaacgttacagattcagagacatggttattccgaagatttaaata 50002997  T
Q  433 tagtcata 440  Q
    ||||||||    
T  50002996 tagtcata 50002989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 271 - 446
Target Start/End: Complemental strand, 54420723 - 54420547
Alignment:
Q  271 ttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaactt-cgattcagtgcagatccaat 369  Q
    ||||||||||||||||||| |||||| | |||||||||||||| ||||||||||| | ||||||||||||||||||||| ||||  ||||||||| ||||    
T  54420723 ttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctgaggtatttgatcgcttcagattgtcagatcaactttcgatctagtgcagattcaat 54420624  T
Q  370 caatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgta 446  Q
    |||||||||||||||||||||||||||||| || || |||||| |||||||||||||||||| ||||||||||||||    
T  54420623 caatgactttgacgtcatccacgttgcagatccggaaacatggctattccggagatttaaatatagtcatatgtgta 54420547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 168 - 399
Target Start/End: Original strand, 12519686 - 12519916
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    |||||||||||||  | ||||||||| ||||||||||||||||||||||||||||| |       |||||||||||||||||||||  ||||||||||||    
T  12519686 tctaactcgtttttctctttcccttttattgaaataagtgattttcacatctattttgtttttt-attttgtgatttcgtcgtcttagtgcgacgttggt 12519784  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    ||||||||||| |||||||||  ||| || |||||||||| ||  ||||||||||| |||||||| ||||||||||||||||||||  ||||||||||||    
T  12519785 ttgttcgtcgtatttgtgcgaagttgattgtctttcttgtatcgttcaggtatttgtttggttcaaattgtcagatcaacttcgatctagtgcagatcca 12519884  T
Q  368 atcaatgactttgacgtcatccacgttgcaga 399  Q
    ||||||||| ||  |||| |||| ||||||||    
T  12519885 atcaatgacattagcgtcgtccatgttgcaga 12519916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 183 - 447
Target Start/End: Complemental strand, 15730050 - 15729787
Alignment:
Q  183 tatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtcttt 282  Q
    ||||||||||| ||||||||||||||||| ||| |||||||||        ||||||||||||||||||||  |||||| ||| ||||||||||||||||    
T  15730050 tatttcccttttattgaaataagtgatttacacttctatttcgtttcttt-ttttgtgatttcgtcgtcttagtgcgaccttgttttgttcgtcgtcttt 15729952  T
Q  283 gtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgac 382  Q
    ||||||| ||||||  ||||||||||||  ||||||||||| |  |||||||||||||||||||||||||| ||||||||||| ||||||||| ||||      
T  15729951 gtgcgacgttgtttgcctttcttgtttcgttcaggtatttgttcagttcagattgtcagatcaacttcgatccagtgcagatcaaatcaatgattttgga 15729852  T
Q  383 gtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||| || | ||||||||  | || |||| | |||| |||||| |||||| |||||||||||||||    
T  15729851 gtcgtcaatgttgcagattcggagacataggtatttcggagacttaaatatagtcatatgtgtag 15729787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 168 - 447
Target Start/End: Original strand, 38434628 - 38434906
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    |||||||||||||  |||||| |||| ||| |||||||||||||||||||||||||          ||||||||||||||||||||  |||||||||| |    
T  38434628 tctaactcgtttttctatttctcttttattaaaataagtgattttcacatctattttatttttttcttttgtgatttcgtcgtcttagtgcgacgttgtt 38434727  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    ||||||||||||||||| |||| |||||| |||||||||||||  ||||||||||| |   ||||||||   |||||| ||||||| ||||||||||  |    
T  38434728 ttgttcgtcgtctttgtccgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagattactagatcagcttcgatccagtgcagataaa 38434827  T
Q  368 atcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    |||||||||||||  ||| || |||||||||| || |  |||||| ||||||||||| |||||| |||||||||||||||    
T  38434828 atcaatgactttggagtcgtcaacgttgcagatcc-gggacatgggtattccggagacttaaatatagtcatatgtgtag 38434906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 183 - 447
Target Start/End: Original strand, 43156821 - 43157085
Alignment:
Q  183 tatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtcttt 282  Q
    ||||||| ||| |||||||||||||||||||||||||| || |        ||| ||||||||||||||||  ||| |||||| ||||||||||| ||||    
T  43156821 tatttcctttttattgaaataagtgattttcacatctactttgtttttttcttt-gtgatttcgtcgtcttagtgcaacgttgttttgttcgtcgacttt 43156919  T
Q  283 gtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgc-agatccaatcaatgactttga 381  Q
    ||||||| |||||| |||||||||||||  ||||||||||| | |||||||||||| |||||| |||||||||||||| ||||| ||||||||||||||     
T  43156920 gtgcgacgttgtttgtctttcttgtttcattcaggtatttgttcggttcagattgttagatcagcttcgattcagtgcaagatcaaatcaatgactttgg 43157019  T
Q  382 cgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
     ||| || |||||||||| || || |||||  ||||||  ||| |||||| |||||||||||||||    
T  43157020 agtcctcaacgttgcagatccggacacatgagtattccatagacttaaatatagtcatatgtgtag 43157085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 168 - 447
Target Start/End: Original strand, 51646123 - 51646405
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    ||||| ||||||| |||||||||||| |||||||||||||||||||||||||||||||        ||| ||||||||||||||||  |||||| || ||    
T  51646123 tctaattcgtttttttatttcccttttattgaaataagtgattttcacatctatttcgttttttc-tttcgtgatttcgtcgtcttaatgcgacatttgt 51646221  T
Q  268 tt-gttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcc 366  Q
    || |||||||||||||||||||  |||||| ||||||||||||| |||| ||||||| | |||||||||| |||||||| ||||||| |||||||||||     
T  51646222 tttgttcgtcgtctttgtgcgatgttgtttgtctttcttgtttcgctcaagtatttgttcggttcagattatcagatcagcttcgatccagtgcagatca 51646321  T
Q  367 aatcaatgactttgacgtcatccacgtt---gcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    |||| |||||||||   || || |||||   ||||| ||  | |||||| |||||| |||| |||||| |||||||||||||||    
T  51646322 aatcgatgactttggaatcgtcaacgttgcagcagatccgaagacatgggtattccagagacttaaatatagtcatatgtgtag 51646405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 196 - 447
Target Start/End: Complemental strand, 44375320 - 44375081
Alignment:
Q  196 ttgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtt 295  Q
    ||||||||||| |||||||||||||||||        |||||||||||||||||||||| ||||||||| ||||||||||||||| |||||||| || ||    
T  44375320 ttgaaataagtaattttcacatctatttc-tttttttattttgtgatttcgtcgtcttcgtgcgacgttcgtttgttcgtcgtctgtgtgcgacgttatt 44375222  T
Q  296 tttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttg 395  Q
    | ||||| || |||||||||| ||||| ||||||||||||||| |||||| | ||           ||||||||||||||||||| |||||| |||||||    
T  44375221 tgtcttttttatttctctcagatatttaattggttcagattgttagatcagcctc-----------gatccaatcaatgactttggcgtcatacacgttg 44375133  T
Q  396 cagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    |||| || || |||||||||| ||||||||| |||| |||||||||||||||    
T  44375132 cagatccggagacatggttatcccggagattaaaatatagtcatatgtgtag 44375081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 279 - 447
Target Start/End: Complemental strand, 52555714 - 52555546
Alignment:
Q  279 ctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactt 378  Q
    |||||| |||| |||||| |||||||||||||||| |||||||| || |||||||||||||| |||| ||||||| ||||||||||||||||||||||||    
T  52555714 ctttgtacgacgttgtttgtctttcttgtttctcttaggtatttaatcggttcagattgtcaaatcagcttcgatccagtgcagatccaatcaatgactt 52555615  T
Q  379 tgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    || ||||||||| ||||||||  | || |||||  |||||||||||||||||| |||||||||||||||    
T  52555614 tggcgtcatccatgttgcagattcggagacatgactattccggagatttaaatatagtcatatgtgtag 52555546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 267 - 449
Target Start/End: Complemental strand, 29474314 - 29474132
Alignment:
Q  267 tttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcc 366  Q
    ||||||||||||||||||||||| ||||||   |||||||||||  ||||||||||| | |||||||||||||||| || ||||||| |||||||||||     
T  29474314 tttgttcgtcgtctttgtgcgacgttgtttgcttttcttgtttcgttcaggtatttgttcggttcagattgtcagaccatcttcgatccagtgcagatca 29474215  T
Q  367 aatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtagtc 449  Q
    ||||||||||||||  ||| || |||||||||| || || |||||| ||||||||||  |||||| |||||||||||||||||    
T  29474214 aatcaatgactttggagtcgtcaacgttgcagatccggagacatgggtattccggaggcttaaatatagtcatatgtgtagtc 29474132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 168 - 446
Target Start/End: Complemental strand, 29589445 - 29589168
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    ||||||||||||| | |||||| ||| ||| |||||||||||||| ||||||| || |        |||||| |||||||||||||  |||||||||| |    
T  29589445 tctaactcgttttat-atttcctttttattaaaataagtgatttttacatctacttggtttttttcttttgttatttcgtcgtcttagtgcgacgttgtt 29589347  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    ||||| || ||||||||||||| |||||| || ||||||||||  ||||||||||| |   ||||||||||  ||||||||||||| ||||||||||| |    
T  29589346 ttgtttgttgtctttgtgcgaccttgtttgtcattcttgtttcgttcaggtatttgttcatttcagattgtttgatcaacttcgatccagtgcagatcaa 29589247  T
Q  368 atcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgta 446  Q
     ||||||||||||  ||| || |||||||||| || || |||||  ||||| ||||| |||||| ||||||||||||||    
T  29589246 ctcaatgactttggagtcttcaacgttgcagatccggagacatgagtattctggagacttaaatatagtcatatgtgta 29589168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 271 - 447
Target Start/End: Original strand, 53903713 - 53903887
Alignment:
Q  271 ttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatc 370  Q
    ||||||||||| || |||| |||||| | |||| ||||||||||||||||||||| | ||||||||| ||||||| ||||||| ||||||||||||||||    
T  53903713 ttcgtcgtcttcgtacgacgttgtttgtttttcctgtttctctcaggtatttgatcgcttcagattgccagatcagcttcgatccagtgcagatccaatc 53903812  T
Q  371 aatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    |||||||||| ||||||||||||| |||| |  || ||||  |||||||||| |||||||| |||||||||||||||    
T  53903813 aatgactttggcgtcatccacgttacagatctggaaacat--ttattccggatatttaaatatagtcatatgtgtag 53903887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 195 - 446
Target Start/End: Original strand, 1124999 - 1125248
Alignment:
Q  195 attgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgt 294  Q
    ||||||||||||||||||||||||||||||         ||| |||||||||||||| |  ||||| |||| |||||  ||||||||| |||||| |||     
T  1124999 attgaaataagtgattttcacatctatttcatttttc--tttcgtgatttcgtcgtcatagtgcgatgttgttttgtctgtcgtctttttgcgacgttga 1125096  T
Q  295 ttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgtt 394  Q
    || |||||||||||||  ||||||||||| |||||||| |||||||||||| ||||||| ||||||||||| ||||||||| ||||| ||| || |||||    
T  1125097 ttgtctttcttgtttcgttcaggtatttgtttggttcaaattgtcagatcagcttcgatccagtgcagatcaaatcaatgattttgaagtcgtcaacgtt 1125196  T
Q  395 gcagacccagatacatggttattccggagatttaaatgtagtcatatgtgta 446  Q
    | ||| ||||| |||||  | ||||| ||| ||| || ||||||||||||||    
T  1125197 gaagatccagagacatgaatgttccgtagacttacatatagtcatatgtgta 1125248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 168 - 447
Target Start/End: Original strand, 16991902 - 16992180
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    |||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||        |||| ||| ||||  ||| ||  || ||||||| |    
T  16991902 tctaactcgtttttctatttcccttttattgaaataagtgattttcacatctatttc-attttttatttcgtggtttccccgttttagtgtgacgttgtt 16992000  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    ||||| |||||||||||||||| ||||||  |||||||||||   |||||||||   | |||||||||| |||||||| ||||||| ||||||| ||| |    
T  16992001 ttgtttgtcgtctttgtgcgacgttgtttgcctttcttgttttgttcaggtattctttcggttcagattatcagatcagcttcgatccagtgcatatcaa 16992100  T
Q  368 atcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    |||||||||||||| ||| |  || ||||||| || || |||||| |||||| |||| |||||| | |||||||||||||    
T  16992101 atcaatgactttgaagtcgtaaacattgcagatccggagacatgggtattccagagacttaaatattgtcatatgtgtag 16992180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 168 - 399
Target Start/End: Original strand, 28990328 - 28990558
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    |||||||||||||  | |||| |||| ||||||||||||||||||||||||||||| |       |||||| ||||| |||||| |  ||||||||||||    
T  28990328 tctaactcgtttttctctttctcttttattgaaataagtgattttcacatctattttgtttttt-attttgggattttgtcgtcatagtgcgacgttggt 28990426  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    |||||||| |||||||||||   |||| | |||||||||||||  ||||| ||||| |  |||||||||||||||| | |||||||  |||||| |||||    
T  28990427 ttgttcgttgtctttgtgcggtgttgtctgtctttcttgtttcgttcaggcatttgttccgttcagattgtcagattagcttcgatctagtgcatatcca 28990526  T
Q  368 atcaatgactttgacgtcatccacgttgcaga 399  Q
    |||||||| ||||||||| |||||||||||||    
T  28990527 atcaatgattttgacgtcgtccacgttgcaga 28990558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 256 - 447
Target Start/End: Original strand, 14346548 - 14346739
Alignment:
Q  256 tgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattc 355  Q
    |||||||||| ||||||||||||| ||||||||| |||||| |||||||||||||  ||||||||||| | | ||||||||||||||||| ||||||| |    
T  14346548 tgcgacgttgttttgttcgtcgtcgttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgctcgattcagattgtcagatcagcttcgatcc 14346647  T
Q  356 agtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    |||||| ||| ||||||||||||||  ||| || |||||||||| || ||  ||||  |||||  |||| |||||| |||||||||||||||    
T  14346648 agtgcaaatcaaatcaatgactttggagtcgtcaacgttgcagatccggagccatgtgtattctagagacttaaatatagtcatatgtgtag 14346739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 185 - 385
Target Start/End: Original strand, 2945184 - 2945383
Alignment:
Q  185 tttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgt 284  Q
    ||||||||| |||||||||||||||||||||||||||||||       ||||||||||||| ||||| |  |||||||||||||||||| |||||| | |    
T  2945184 tttcccttttattgaaataagtgattttcacatctatttcgtttttt-attttgtgatttcatcgtcatagtgcgacgttggtttgttcatcgtctgtat 2945282  T
Q  285 gcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgt 384  Q
    ||| |||||||  | ||| |||||||  ||||||||||| | |||||||||||||||||||| |||||| ||||| |||  ||||||||||||||| |||    
T  2945283 gcggcattgttagtgttttttgtttcgttcaggtatttgttcggttcagattgtcagatcaatttcgatccagtgaagacacaatcaatgactttggcgt 2945382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 171 - 447
Target Start/End: Complemental strand, 38170239 - 38169966
Alignment:
Q  171 aactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttg 270  Q
    |||||||||| || ||||||||| ||||||||||||||||||||||| |||||||       |||| |||||||| |||||||  ||| |  ||| ||||    
T  38170239 aactcgttttctt-tttccctttcattgaaataagtgattttcacatttatttcgtttttt-atttcgtgatttcatcgtcttagtgcaatattgttttg 38170142  T
Q  271 ttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatc 370  Q
    || ||||||||  | |||| |||||| |||||||||||| | ||||||||||  |  ||||||||||||| |||||||| |||  ||||| |||||||||    
T  38170141 tttgtcgtcttcttacgacgttgtttgtctttcttgtttgt-tcaggtatttattccgttcagattgtcatatcaactttgatctagtgctgatccaatc 38170043  T
Q  371 aatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    |||||||||| ||||||| |||||||| | || ||| ||||  ||||||||||| || ||| |||||||| ||||||    
T  38170042 aatgactttggcgtcatcaacgttgcaaatcctgatgcatgagtattccggagacttgaatatagtcatacgtgtag 38169966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 168 - 447
Target Start/End: Complemental strand, 46775940 - 46775664
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    |||| ||||||||  | |||||||||||||||||||||| ||| | || ||||||| |        ||||||||||||||||||||  || ||||||| |    
T  46775940 tctatctcgtttttctctttccctttaattgaaataagtaattgttacctctattttgttttttc-ttttgtgatttcgtcgtcttagtgtgacgttgtt 46775842  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    |  |||||||| |||||||| | |||||| ||||| ||| |||  ||| ||||||| | | ||||||||||||||||| |||||||  ||||||||||||    
T  46775841 taattcgtcgt-tttgtgcggcgttgtttgtcttttttgcttcgttcatgtatttgttcgattcagattgtcagatcagcttcgatctagtgcagatcca 46775743  T
Q  368 atcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    |||||||| |||||||||||| ||||||||||  | ||||||| | ||||||||||| || ||| || ||||||||||||    
T  46775742 atcaatgaatttgacgtcatcaacgttgcagatacggatacatag-tattccggagacttgaatataatcatatgtgtag 46775664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 185 - 399
Target Start/End: Complemental strand, 44021638 - 44021435
Alignment:
Q  185 tttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgt 284  Q
    |||||||||  ||| |||||||||||||||||||||| |||       |||||||||||| ||||||||  || ||||||||||||||||||||||||      
T  44021638 tttccctttcgttgcaataagtgattttcacatctatatcgtttttt-attttgtgattttgtcgtcttaatgtgacgttggtttgttcgtcgtctttaa 44021540  T
Q  285 gcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgt 384  Q
    ||| |||||||| |||||||||||||  ||          | |||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||    
T  44021539 gcggcattgtttgtctttcttgtttcgttc----------tcggttcagattgtcagaacaactttgattcagtgcagatccaattaatgactttgacgt 44021450  T
Q  385 catccacgttgcaga 399  Q
    | |||||||||||||    
T  44021449 cgtccacgttgcaga 44021435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 170 - 447
Target Start/End: Complemental strand, 1657648 - 1657372
Alignment:
Q  170 taactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggttt 269  Q
    |||||||||||  ||||| | ||| ||  |||| ||||||||||||||||||||||        ||||||||||||||||||||  |||||| ||| |||    
T  1657648 taactcgtttttctatttactttttataaaaattagtgattttcacatctatttcgctttttc-ttttgtgatttcgtcgtcttagtgcgacattgtttt 1657550  T
Q  270 gttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaat 369  Q
    ||||||| ||||| | ||||||  ||| |||| |||||||   | ||||||||| | | ||||||| ||||||| | ||||||| ||||||| ||| |||    
T  1657549 gttcgtcatctttatacgacatcatttatcttccttgttttgtttaggtatttgttcgattcagatagtcagattagcttcgatccagtgcaaatcaaat 1657450  T
Q  370 caatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    |||||||||||  ||| || |||||||||| || || |||||| |||||| |||| |||||| |||||||||||||||    
T  1657449 caatgactttggagtcgtcaacgttgcagatccggagacatgggtattccagagacttaaatatagtcatatgtgtag 1657372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 243 - 405
Target Start/End: Complemental strand, 30416603 - 30416441
Alignment:
Q  243 ttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcaga 342  Q
    |||||||||||  |||||||||| ||||||||||||||||| ||||| |||||| ||||| ||||||   |  |||||||| | ||||||||||||||||    
T  30416603 ttcgtcgtctttgtgcgacgttgttttgttcgtcgtctttgcgcgacgttgtttctcttttttgttttgtttgggtatttgttcggttcagattgtcaga 30416504  T
Q  343 tcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcagacccaga 405  Q
    ||| ||| ||| ||||||||||| ||||||||||||||  |||||| |||||||||| |||||    
T  30416503 tcagctttgatccagtgcagatcaaatcaatgactttggagtcatcaacgttgcagatccaga 30416441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 195 - 399
Target Start/End: Complemental strand, 7242826 - 7242623
Alignment:
Q  195 attgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgt 294  Q
    ||||||||||| ||||||||||||||||||        ||| |||||| | ||||||||  |||||||| | ||||||||||||||||||||||  ||||    
T  7242826 attgaaataagcgattttcacatctatttc-attttttattctgtgatattgtcgtcttagtgcgacgtcgatttgttcgtcgtctttgtgcgaagttgt 7242728  T
Q  295 ttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgtt 394  Q
    || |||||||| ||||  ||| ||||||| | |||||||||||||||| |||||| |||  ||  |||||||||| |||||||||| |||| ||||||||    
T  7242727 ttgtctttcttatttcgttcaagtatttgttcggttcagattgtcagaccaactttgatctaggccagatccaataaatgactttggcgtcgtccacgtt 7242628  T
Q  395 gcaga 399  Q
    |||||    
T  7242627 gcaga 7242623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 233 - 399
Target Start/End: Complemental strand, 6789896 - 6789730
Alignment:
Q  233 attttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttca 332  Q
    |||||||||||| ||||||||  |||  |||| |||||||||||||||||||||| |||||||| |||||||||||||  | ||||||||| |   ||||    
T  6789896 attttgtgattttgtcgtcttagtgcagcgtttgtttgttcgtcgtctttgtgcgccattgtttgtctttcttgtttcgttaaggtatttgttcaattca 6789797  T
Q  333 gattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcaga 399  Q
    || |||||||||| ||||||| |   |||||||||||||||||||||| | ||||||| ||||||||    
T  6789796 gaatgtcagatcagcttcgatcctacgcagatccaatcaatgactttggcatcatccatgttgcaga 6789730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 255 - 399
Target Start/End: Original strand, 3169542 - 3169686
Alignment:
Q  255 ttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgatt 354  Q
    |||||| ||||| |||||||| ||||||||||| | |||||| |||||||||||||  |||| |||||| | |||||| |||||||||||| |||| ||     
T  3169542 ttgcgatgttgggttgttcgttgtctttgtgcggcgttgtttgtctttcttgtttcgttcagatatttgttcggttcaaattgtcagatcagcttcaatc 3169641  T
Q  355 cagtgcagatccaatcaatgactttgacgtcatccacgttgcaga 399  Q
    |||||||||| ||||||||||||||  |||||||||| |||||||    
T  3169642 cagtgcagattcaatcaatgactttcgcgtcatccactttgcaga 3169686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 247 - 447
Target Start/End: Complemental strand, 26576508 - 26576309
Alignment:
Q  247 tcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaa 346  Q
    ||||||| |||| |||||| |||||| |||||| ||||||||| |||||| |||||| ||||||  ||||||||||| | | |||||||||||| ||||     
T  26576508 tcgtcttattgcaacgttgttttgtttgtcgtcgttgtgcgac-ttgtttgtctttcctgtttcgttcaggtatttgttcgattcagattgtcaaatcag 26576410  T
Q  347 cttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgta 446  Q
    |||||||  |||||||||| ||||||||||||||  ||| || ||| |||||| ||  | |||||  ||||||||||| | |||| ||||||||||||||    
T  26576409 cttcgatctagtgcagatcaaatcaatgactttggagtcgtcaacgatgcagatccgaagacatgagtattccggagactcaaatatagtcatatgtgta 26576310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 238 - 439
Target Start/End: Complemental strand, 4959588 - 4959388
Alignment:
Q  238 gtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattg 337  Q
    ||||||||||||||||  | |||| ||| ||||||||| || |||||||||| |||||| |||||||||||||  ||  ||||||| | |||||  | ||    
T  4959588 gtgatttcgtcgtcttagtacgacattgttttgttcgttgtttttgtgcgacgttgtttgtctttcttgtttcgttcctgtatttgttcggttcgaaatg 4959489  T
Q  338 tcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtc 437  Q
    |||||||| ||| |||| ||||||||||||||||||||||||| |||| ||  ||||||||| || || |||||| ||||||| ||| || ||| |||||    
T  4959488 tcagatcagcttagatt-agtgcagatccaatcaatgactttggcgtcgtcagcgttgcagatccggagacatgggtattccgtagacttgaatatagtc 4959390  T
Q  438 at 439  Q
    ||    
T  4959389 at 4959388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 233 - 424
Target Start/End: Complemental strand, 1645570 - 1645384
Alignment:
Q  233 attttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttca 332  Q
    ||||||||||||||||||     ||||  ||||| |||||||| ||||||||||| | |||||| |||||||||||||  |||| |||||| ||||||||    
T  1645570 attttgtgatttcgtcgt-----tgcggtgttgggttgttcgttgtctttgtgcggcgttgtttgtctttcttgtttcgttcagatatttgtttggttca 1645476  T
Q  333 gattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggaga 424  Q
     ||||||||||||  ||| ||  || |||||| |||||||||||||| ||||||||||| |||||||  |  |||||||| |||| ||||||    
T  1645475 aattgtcagatcagtttcaatctagggcagattcaatcaatgactttcacgtcatccactttgcagattcgaatacatgggtattacggaga 1645384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 293 - 443
Target Start/End: Original strand, 9549594 - 9549743
Alignment:
Q  293 gtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacg 392  Q
    |||| |||||||||||||||| ||||||||||| || || |||||||| ||||  ||||||  ||| |||||||||||||| |||||||  |||| ||||    
T  9549594 gtttgtctttcttgtttctctaaggtatttgatcggctc-gattgtcatatcagtttcgatctagtacagatccaatcaattactttgaaatcattcacg 9549692  T
Q  393 ttgcagacccagatacatggttattccggagatttaaatgtagtcatatgt 443  Q
    ||||||| | ||| ||||| |||||| |||||||||||| |||||||||||    
T  9549693 ttgcagatcaagagacatgattattctggagatttaaatatagtcatatgt 9549743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 241 - 410
Target Start/End: Complemental strand, 46386786 - 46386617
Alignment:
Q  241 atttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtca 340  Q
    ||||| |||||||  ||| || ||| |||||||| ||| |||||||| |||||||| | |||||||||||  | ||||||||| |  ||||| |||||||    
T  46386786 atttcatcgtcttagtgcaactttgttttgttcgccgtgtttgtgcgtcattgtttgtttttcttgtttcgtttaggtatttgttctgttcaaattgtca 46386687  T
Q  341 gatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagatacat 410  Q
     ||||||||||||  ||||| ||||||||||||||||||| |||  || |||||||||| ||||||||||    
T  46386686 tatcaacttcgatctagtgctgatccaatcaatgactttggcgttgtcaacgttgcagatccagatacat 46386617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 199 - 410
Target Start/End: Complemental strand, 4622763 - 4622552
Alignment:
Q  199 aaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgttttt 298  Q
    ||||||||||||| ||||| |||||||       |||||||||||||||||||||  |||||||| ||  |||| |||||||||||| | |  ||||| |    
T  4622763 aaataagtgatttccacatttatttcgttcttttattttgtgatttcgtcgtcttagtgcgacgtgggagtgtttgtcgtctttgtgtggcgctgtttgt 4622664  T
Q  299 ctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcag 398  Q
    |||||||||||  |||||||||| | | |||||||||||||| ||    |||||| || |||| || ||||||| |||||||| ||| |||||||||| |    
T  4622663 ctttcttgttttgctcaggtattggttcggttcagattgtcatattggtttcgatccaatgcaaattcaatcaacgactttgatgtcctccacgttgctg 4622564  T
Q  399 acccagatacat 410  Q
    | ||||| ||||    
T  4622563 atccagagacat 4622552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 238 - 447
Target Start/End: Complemental strand, 29577137 - 29576927
Alignment:
Q  238 gtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattg 337  Q
    |||||||  |||||||  ||| |||| | |||||||| |||||||||||| | |||||| ||||| |||||||  ||||||||||| | |||||||||||    
T  29577137 gtgattttatcgtcttagtgcaacgtagttttgttcgacgtctttgtgcggcgttgtttgtcttttttgtttcgttcaggtatttgttcggttcagattg 29577038  T
Q  338 tcagatcaacttcgattcagtgcagatccaatc-aatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagt 436  Q
    ||| |||  ||| ||| ||| ||| |||||||| ||||| |||| |||| || |||||||||| ||  | |||||  ||||||||||| || ||| ||||    
T  29577037 tcatatcggcttagatccagcgcatatccaatcaaatgattttggcgtcgtcaacgttgcagatccgaagacatgaatattccggagacttgaatatagt 29576938  T
Q  437 catatgtgtag 447  Q
    |||||||||||    
T  29576937 catatgtgtag 29576927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 243 - 361
Target Start/End: Original strand, 40859778 - 40859896
Alignment:
Q  243 ttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcaga 342  Q
    ||||| |||||  ||||||| || ||||||||||||||||||||||| |||||| ||||||||||||   || |||||||| | ||||||||||||||||    
T  40859778 ttcgttgtctttgtgcgacgctgttttgttcgtcgtctttgtgcgacgttgtttgtctttcttgttttgttcgggtatttgttcggttcagattgtcaga 40859877  T
Q  343 tcaacttcgattcagtgca 361  Q
    ||| ||||||| |||||||    
T  40859878 tcagcttcgatccagtgca 40859896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 313 - 447
Target Start/End: Original strand, 23926215 - 23926349
Alignment:
Q  313 tcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatgg 412  Q
    |||||| |||| | |||||| ||| ||| |||| |||||||| | ||||||||||| ||||||||||| | ||||| |||||||||| ||||| |||||     
T  23926215 tcaggtgtttgttcggttcaaattctcatatcagcttcgattaaatgcagatccaaccaatgactttggcatcatcaacgttgcagatccagagacatga 23926314  T
Q  413 ttattccggagatttaaatgtagtcatatgtgtag 447  Q
     |||||||||||||| ||| ||||||||| |||||    
T  23926315 ctattccggagattttaatatagtcatatttgtag 23926349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 234 - 447
Target Start/End: Complemental strand, 33020944 - 33020733
Alignment:
Q  234 ttttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttcttt---cttgtttctctcaggtatttgattggtt 330  Q
    |||||||||||| || ||||  ||||||| || |||||| |||||||||||||| | |||||| |||||   |||||     | |||| | || | | ||    
T  33020944 ttttgtgatttcatcatcttagtgcgacgctgttttgtttgtcgtctttgtgcggcgttgtttgtcttttcccttgt-----tgaggtgtctgttcgatt 33020850  T
Q  331 cagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaa 430  Q
    |||||||||||||||  |||||| ||||||| |||||| ||||||||||| ||||||| |||||| |||  | || ||||| ||||||||||||||| ||    
T  33020849 cagattgtcagatcagtttcgatccagtgcaaatccaaccaatgactttggcgtcatcaacgttgtagattcggagacatgattattccggagattttaa 33020750  T
Q  431 tgtagtcatatgtgtag 447  Q
    | ||||||||| |||||    
T  33020749 tatagtcatatttgtag 33020733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 170 - 353
Target Start/End: Original strand, 6408472 - 6408657
Alignment:
Q  170 taactcgttttgttatttccctttaattgaaataagtgattttcacatcta--tttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    |||||||||||  |||||||||||  ||||||||| ||||||||||||| |  |||||        ||| ||||||||| ||||||  |||||||||| |    
T  6408472 taactcgtttttatatttcccttttgttgaaataattgattttcacatcaaaatttcgtttttttctttcgtgatttcgacgtcttggtgcgacgttgtt 6408571  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgat 353  Q
    | ||||||||||||||||||||||||||| |||| ||||||||  | ||||| ||| |  ||||| ||||||| |||| |||||||    
T  6408572 tggttcgtcgtctttgtgcgacattgtttgtcttacttgtttcgtttaggtaattgttcagttcaaattgtcaaatcagcttcgat 6408657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 30 - 128
Target Start/End: Complemental strand, 31599693 - 31599595
Alignment:
Q  30 atcattattgtgataggaagaatattaatttggnnnnnnnttatctttggacattatacacctcataaaatcgagggagaaatatcatctttggacatt 128  Q
    ||||||||||||||||||| ||||||||||||        |||||||||||||||||| |||||||||||||||  ||||| |||||||||||||||||    
T  31599693 atcattattgtgataggaataatattaatttgaaaaaaaattatctttggacattatagacctcataaaatcgaaagagaattatcatctttggacatt 31599595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 241 - 446
Target Start/End: Complemental strand, 35658542 - 35658338
Alignment:
Q  241 atttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtca 340  Q
    |||| |||||||| ||||||||||| ||||||   |||||||||||||| |||||| |||||  | |||   || ||| |||| |  ||| |||||||||    
T  35658542 attttgtcgtcttattgcgacgttgttttgtttaccgtctttgtgcgacgttgtttgtcttttctcttttgttc-ggtgtttgttcagtttagattgtca 35658444  T
Q  341 gatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcata 440  Q
    |||||  || |||  ||||||||| ||| ||||||||||||||||||| |||||||||| || ||  ||||  |||||| ||||||| ||| ||||||||    
T  35658443 gatcagttttgatcaagtgcagattcaaccaatgactttgacgtcatcaacgttgcagatccggaggcatgtctattccagagattttaatatagtcata 35658344  T
Q  441 tgtgta 446  Q
    | ||||    
T  35658343 tttgta 35658338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 183 - 289
Target Start/End: Original strand, 40859691 - 40859796
Alignment:
Q  183 tatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtcttt 282  Q
    ||||||||||| |||||||||||||||||||||||||||||||        ||| ||||||||| ||||||  |||||||||| ||||||||| ||||||    
T  40859691 tatttcccttttattgaaataagtgattttcacatctatttcgtttttgc-tttcgtgatttcgccgtcttagtgcgacgttgttttgttcgttgtcttt 40859789  T
Q  283 gtgcgac 289  Q
    |||||||    
T  40859790 gtgcgac 40859796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 338 - 447
Target Start/End: Original strand, 11817255 - 11817364
Alignment:
Q  338 tcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtc 437  Q
    |||||||| |||||||  ||| ||||||||| |||||||||||||||| || |||||||||| || ||  ||||  |||||||||||||| ||| |||||    
T  11817255 tcagatcagcttcgatctagtacagatccaaccaatgactttgacgtcgtcaacgttgcagatccggaagcatgactattccggagattttaatatagtc 11817354  T
Q  438 atatgtgtag 447  Q
    |||| |||||    
T  11817355 atatatgtag 11817364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 183 - 297
Target Start/End: Complemental strand, 30416690 - 30416577
Alignment:
Q  183 tatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtcttt 282  Q
    ||||||||||| |||||||||||||||||||||||||||||          ||| |||||||||  |||||  |||||||||| ||||||||||||||||    
T  30416690 tatttcccttttattgaaataagtgattttcacatctattt-ttgtttttctttcgtgatttcgctgtcttagtgcgacgttgttttgttcgtcgtcttt 30416592  T
Q  283 gtgcgacattgtttt 297  Q
    ||||||| |||||||    
T  30416591 gtgcgacgttgtttt 30416577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 239 - 399
Target Start/End: Original strand, 29257325 - 29257485
Alignment:
Q  239 tgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgt-ttctctcaggtatttgattggttcagattg 337  Q
    |||||| ||| |||| ||||||||||| |||||| ||||||||||||| || |||||| | |||  ||| || |  ||| | |||| |  ||||||||||    
T  29257325 tgattttgtcatcttattgcgacgttgttttgttagtcgtctttgtgcaacgttgtttgtattttctgtcttgtaacag-tgtttgttcagttcagattg 29257423  T
Q  338 tcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcaga 399  Q
    |||||||||||| ||| |||| || ||||||||||||||||||  ||| || ||||||||||    
T  29257424 tcagatcaactttgatacagtacaaatccaatcaatgactttggtgtcgtcaacgttgcaga 29257485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 318 - 399
Target Start/End: Original strand, 31311647 - 31311728
Alignment:
Q  318 tatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcaga 399  Q
    |||||| | |||||||||||||  |||||||| ||| |||| |||||| ||| |||||||||| ||||||||||||||||||    
T  31311647 tatttgttcggttcagattgtcctatcaactttgatccagtacagatcaaattaatgactttgtcgtcatccacgttgcaga 31311728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 362 - 447
Target Start/End: Complemental strand, 50981605 - 50981520
Alignment:
Q  362 gatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||||||| ||||||||||| ||||||| |||||| ||| |||||  |||||||||||| ||||||| ||| ||||||||| |||||    
T  50981605 gatccaaccaatgactttggcgtcatcaacgttgtagatccagaggcatggttattccagagattttaatatagtcatatttgtag 50981520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 356 - 452
Target Start/End: Original strand, 5814563 - 5814659
Alignment:
Q  356 agtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtagtcata 452  Q
    ||||||||| | ||||||||||||| ||||||| |||||||||| ||||| |||||  ||||| ||||| || ||| ||||||||| ||||| ||||    
T  5814563 agtgcagattcgatcaatgactttggcgtcatcaacgttgcagatccagagacatgagtattctggagacttgaatatagtcatatttgtaggcata 5814659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 28 - 112
Target Start/End: Complemental strand, 31599578 - 31599493
Alignment:
Q  28 atatcattattgtgataggaagaatattaatttggnnnnnnnt-tatctttggacattatacacctcataaaatcgagggagaaat 112  Q
    ||||||||||||||||||||| ||||||||||||        | |||||||||||||||||||||||||||||| ||| |||||||    
T  31599578 atatcattattgtgataggaataatattaatttgaaaaaaaatatatctttggacattatacacctcataaaattgagagagaaat 31599493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 168 - 265
Target Start/End: Original strand, 53903640 - 53903735
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttg 265  Q
    |||||||||||||  ||||||||||| |||||||||||||| |||||||||||||||        |||||||||||||||||||||| | ||||||||    
T  53903640 tctaactcgtttttctatttcccttttattgaaataagtga-tttcacatctatttc-attttttattttgtgatttcgtcgtcttcgtacgacgttg 53903735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 333 - 424
Target Start/End: Complemental strand, 38546005 - 38545914
Alignment:
Q  333 gattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggaga 424  Q
    ||||||||||||| ||| |||  |||||| || ||||||||||||||  ||||||| |||||||||| || || |||||| |||||||||||    
T  38546005 gattgtcagatcagcttagatcaagtgcaaattcaatcaatgacttttgcgtcatcaacgttgcagatccggagacatggatattccggaga 38545914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 168 - 265
Target Start/End: Complemental strand, 54420796 - 54420701
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttg 265  Q
    |||||||||||||  ||||| ||||| |||||||||||||| ||||||||||||||||       |||||||||||||||||||||  ||||||||||    
T  54420796 tctaactcgtttttctattttccttttattgaaataagtga-tttcacatctatttcg-ttttttattttgtgatttcgtcgtctttgtgcgacgttg 54420701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 167 - 271
Target Start/End: Original strand, 9549496 - 9549599
Alignment:
Q  167 ttctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttgg 266  Q
    ||||||||||||||  | ||| ||||| ||||||||||||||||| |||||||||||||       ||||| ||||||||||||| || ||| |||||||    
T  9549496 ttctaactcgtttttctcttttccttttattgaaataagtgatttccacatctatttcg-ttttttattttttgatttcgtcgtcgtcgtgctacgttgg 9549594  T
Q  267 tttgt 271  Q
    |||||    
T  9549595 tttgt 9549599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 330 - 395
Target Start/End: Original strand, 5388706 - 5388771
Alignment:
Q  330 tcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttg 395  Q
    ||||||||||||||||  |||||| ||||||| ||| || ||||||||||||||||||| ||||||    
T  5388706 tcagattgtcagatcagattcgatccagtgcaaatcgaaccaatgactttgacgtcatcaacgttg 5388771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 170 - 223
Target Start/End: Complemental strand, 9526421 - 9526368
Alignment:
Q  170 taactcgttttgttatttccctttaattgaaataagtgattttcacatctattt 223  Q
    |||||||||||  | ||||||||| |||||||||||||||||||||||||||||    
T  9526421 taactcgtttttctctttccctttgattgaaataagtgattttcacatctattt 9526368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 329 - 374
Target Start/End: Complemental strand, 10665793 - 10665748
Alignment:
Q  329 ttcagattgtcagatcaacttcgattcagtgcagatccaatcaatg 374  Q
    |||||||||||||||||||||||||  |||||| ||||||||||||    
T  10665793 ttcagattgtcagatcaacttcgatcaagtgcatatccaatcaatg 10665748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 329 - 374
Target Start/End: Original strand, 10710242 - 10710287
Alignment:
Q  329 ttcagattgtcagatcaacttcgattcagtgcagatccaatcaatg 374  Q
    ||||||||||||||||||||| |||| |||||| ||||||||||||    
T  10710242 ttcagattgtcagatcaactttgattaagtgcatatccaatcaatg 10710287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 329 - 374
Target Start/End: Complemental strand, 10879938 - 10879893
Alignment:
Q  329 ttcagattgtcagatcaacttcgattcagtgcagatccaatcaatg 374  Q
    |||||||||||||||||||||||||  |||||| ||||||||||||    
T  10879938 ttcagattgtcagatcaacttcgatcaagtgcatatccaatcaatg 10879893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 329 - 374
Target Start/End: Original strand, 10924012 - 10924057
Alignment:
Q  329 ttcagattgtcagatcaacttcgattcagtgcagatccaatcaatg 374  Q
    ||||||||||||||||||||| |||| |||||| ||||||||||||    
T  10924012 ttcagattgtcagatcaactttgattaagtgcatatccaatcaatg 10924057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 356 - 411
Target Start/End: Original strand, 8712747 - 8712802
Alignment:
Q  356 agtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatg 411  Q
    ||||||||||| ||||||||||||| |||| || |||||||||| ||||| |||||    
T  8712747 agtgcagatccgatcaatgactttggcgtcgtcaacgttgcagatccagagacatg 8712802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 246 - 405
Target Start/End: Original strand, 47466012 - 47466170
Alignment:
Q  246 gtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatca 345  Q
    ||||||||  ||||||| || |||||| ||||||||||| || |||||||| | ||||    || | ||||||||||| |  | | ||||||| ||||||    
T  47466012 gtcgtcttagtgcgacgatgttttgtttgtcgtctttgtacggcattgtttgtttttcccccttgt-tcaggtatttgttcagataagattgttagatca 47466110  T
Q  346 acttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcagacccaga 405  Q
    | ||||||  ||| ||||||||| ||||||||||| | ||| | |||||||||| |||||    
T  47466111 aattcgatcaagtccagatccaaccaatgactttggcatcaacaacgttgcagatccaga 47466170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 168 - 219
Target Start/End: Complemental strand, 52555805 - 52555754
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatct 219  Q
    |||||||||||||  |||||  |||| |||||||||||||||||||||||||    
T  52555805 tctaactcgtttttctatttatcttttattgaaataagtgattttcacatct 52555754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 452
Target Start/End: Original strand, 7060560 - 7060642
Alignment:
Q  370 caatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtagtcata 452  Q
    |||| |||||| ||||||| |||||||||| ||||| |||||  |||||||||||  | ||| ||||||||| ||||| ||||    
T  7060560 caattactttggcgtcatcaacgttgcagatccagagacatgagtattccggagacatgaatatagtcatatttgtaggcata 7060642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 183 - 225
Target Start/End: Complemental strand, 29474423 - 29474381
Alignment:
Q  183 tatttccctttaattgaaataagtgattttcacatctatttcg 225  Q
    ||||||||||| ||||||||||||||||| || ||||||||||    
T  29474423 tatttcccttttattgaaataagtgatttacatatctatttcg 29474381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 374
Target Start/End: Original strand, 17219943 - 17219988
Alignment:
Q  329 ttcagattgtcagatcaacttcgattcagtgcagatccaatcaatg 374  Q
    |||||||||| ||||||||||||||  |||| ||||||||||||||    
T  17219943 ttcagattgttagatcaacttcgatcaagtgtagatccaatcaatg 17219988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 374
Target Start/End: Complemental strand, 22067012 - 22066967
Alignment:
Q  329 ttcagattgtcagatcaacttcgattcagtgcagatccaatcaatg 374  Q
    |||||||||||| ||||| ||||||  |||||||||||||||||||    
T  22067012 ttcagattgtcaaatcaatttcgatcaagtgcagatccaatcaatg 22066967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 234 - 307
Target Start/End: Complemental strand, 36804576 - 36804503
Alignment:
Q  234 ttttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgt 307  Q
    ||||||||||||||||||||  |||| | ||| |||||| || |||||| |||| |||||||| | ||||||||    
T  36804576 ttttgtgatttcgtcgtcttagtgcggcattgttttgtttgttgtctttatgcggcattgtttgtatttcttgt 36804503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 239 - 288
Target Start/End: Complemental strand, 38546072 - 38546023
Alignment:
Q  239 tgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcga 288  Q
    |||||| ||||||||  ||||||||||  |||||||||||||||||||||    
T  38546072 tgattttgtcgtcttaatgcgacgttgtgttgttcgtcgtctttgtgcga 38546023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 193; Significance: 1e-105; HSPs: 68)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 168 - 457
Target Start/End: Original strand, 5832263 - 5832552
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    |||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||    
T  5832263 tctaactcgtttttctatttcccttttattgaaataagtgattttcacatctatttcgtttttttattttgtgatttcgtcgtcttcttgcgacgttggt 5832362  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    ||||||||||| |||||||||| |||||| |||||||||||||||||||||||||||| |||||||||||||||| || ||||||| ||||||||||| |    
T  5832363 ttgttcgtcgtatttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagattgtcagaccagcttcgatccagtgcagatcta 5832462  T
Q  368 atcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtagtcatatgtga 457  Q
    |||||||||||||||||||||||||||||||| |  || ||||| ||||||||||||||||||| ||||||||||||||| ||| |||||    
T  5832463 atcaatgactttgacgtcatccacgttgcagatctggagacatgattattccggagatttaaatatagtcatatgtgtaggcatttgtga 5832552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 168 - 447
Target Start/End: Complemental strand, 630869 - 630590
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    |||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||    
T  630869 tctaactcgtttttctatttcccttttattgaaataagtgattttcacatctatttcgtttttttattttgtgatttcgtcgtcttcttgcgacgttggt 630770  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    |||||||||||||||||||||| |||||  |||||||||||||||||| ||||||||| |||  ||||||||||| || ||||||| ||||||||||| |    
T  630769 ttgttcgtcgtctttgtgcgacgttgttcgtctttcttgtttctctcaagtatttgatcggtcaagattgtcagaccagcttcgatccagtgcagatcta 630670  T
Q  368 atcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||||||||||||||||||||||||||||||||||  || ||||||||||||||||||||||||| |||||||||||||||    
T  630669 atcaatgactttgacgtcatccacgttgcagacctggagacatggttattccggagatttaaatatagtcatatgtgtag 630590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 185 - 447
Target Start/End: Complemental strand, 22344979 - 22344718
Alignment:
Q  185 tttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgt 284  Q
    ||||||||| ||||||||||||||||||||||||||||| |       |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  22344979 tttcccttttattgaaataagtgattttcacatctattttgtttttt-attttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgt 22344881  T
Q  285 gcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgt 384  Q
    ||||| |||||| | ||||||||||||||||||||||||||  |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  22344880 gcgacgttgtttgtttttcttgtttctctcaggtatttgatcagttcagattgtcagatcagcttcgatccagtgcagatccaatcaatgactttgacgt 22344781  T
Q  385 catccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||||||||||||||| || |||||||||||||||||||||||||||| |||||||||||||||    
T  22344780 catccacgttgcagatccggatacatggttattccggagatttaaatatagtcatatgtgtag 22344718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 178; E-Value: 8e-96
Query Start/End: Original strand, 168 - 447
Target Start/End: Complemental strand, 44562833 - 44562555
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    |||||||||||||  ||||||||||| ||||||||||||||||||||||||| || ||       |||||||||||||||| ||||| ||||||||||||    
T  44562833 tctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttat-attttgtgatttcgtcatcttcgtgcgacgttggt 44562735  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| |||||||||||||    
T  44562734 ttgttcgtcgtctttgtgcgacattgtttgtctttcttgtttctctcaggtatttgataggttcagattgtcagatcagcttcgatccagtgcagatcca 44562635  T
Q  368 atcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||||||||||||| ||||||| |||||||||| || || |||||  |||||||||||||||||| |||||||||||||||    
T  44562634 atcaatgactttggcgtcatctacgttgcagatccggagacatgactattccggagatttaaatatagtcatatgtgtag 44562555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 168 - 447
Target Start/End: Original strand, 21326503 - 21326781
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    |||||||||||||  ||||||||||| ||||||||||||||||||||||||| || ||       |||||  ||||||||||||||| || ||| |||||    
T  21326503 tctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttgcgtttttt-attttacgatttcgtcgtcttcgtgtgacattggt 21326601  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    |||||||||||||||||||||| |||||| |||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||| |||||||||||||    
T  21326602 ttgttcgtcgtctttgtgcgacgttgtttgtctttcttgtttttctcaggtatttgatcggttcagattgtcagatcagcttcgatccagtgcagatcca 21326701  T
Q  368 atcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||||||||||||| |||||||||||||||||| || || |||||| ||||||| |||||||||| |||||||||||||||    
T  21326702 atcaatgactttggcgtcatccacgttgcagatccggagacatggctattccgaagatttaaatatagtcatatgtgtag 21326781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 168 - 447
Target Start/End: Original strand, 4564548 - 4564824
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    |||||||||||||  |||||| |||| ||||||||||||||||| |||||||||||||       |||||||||||||||||||||| ||||||||||||    
T  4564548 tctaactcgtttttctatttctcttttattgaaataagtgattt-cacatctatttcgtttttt-attttgtgatttcgtcgtcttcgtgcgacgttggt 4564645  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    | ||| |||||||||||||||| |||||| | |||||| ||||||||||||||||||| | ||||||||||||||||| ||||||| |||||||||| ||    
T  4564646 t-gttagtcgtctttgtgcgacgttgtttgtttttcttatttctctcaggtatttgatcgcttcagattgtcagatcagcttcgatccagtgcagattca 4564744  T
Q  368 atcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    |||||||||||||  ||||||||| ||||||| || || ||||||||||||||||||||||||| |||||||||||||||    
T  4564745 atcaatgactttggtgtcatccacattgcagatccggaaacatggttattccggagatttaaatatagtcatatgtgtag 4564824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 172 - 447
Target Start/End: Complemental strand, 15276530 - 15276252
Alignment:
Q  172 actcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgt 271  Q
    |||||||||  | ||||||||| ||||||||||||||||||||||||||||| |       |||||||||||||||||| ||| ||||||||||||||||    
T  15276530 actcgtttttctctttcccttttattgaaataagtgattttcacatctattttgtttttt-attttgtgatttcgtcgttttcgtgcgacgttggtttgt 15276432  T
Q  272 tcgtcgtctttgtgcgacattgtttttcttt----cttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    |||||||||||||||||  |||||||| |||    ||||||||||||||||||||||| |||||||||||| |||||| ||||||| |||||||||||||    
T  15276431 tcgtcgtctttgtgcgatgttgttttttttttcttcttgtttctctcaggtatttgatcggttcagattgtgagatcagcttcgatccagtgcagatcca 15276332  T
Q  368 atcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||||||||||||| |||||||||||||||||| |  || ||||| ||||||| ||||||||||| |||||||||||||||    
T  15276331 atcaatgactttggcgtcatccacgttgcagatctggagacatgattattccagagatttaaatatagtcatatgtgtag 15276252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 185 - 447
Target Start/End: Original strand, 23257135 - 23257396
Alignment:
Q  185 tttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgt 284  Q
    ||||||||| ||||||||||||||||||||||| ||||| |       || |||||||||| |||||||| |||||||||||||||||||||||||||||    
T  23257135 tttcccttttattgaaataagtgattttcacatttattttgtttttt-atcttgtgatttcatcgtcttcgtgcgacgttggtttgttcgtcgtctttgt 23257233  T
Q  285 gcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgt 384  Q
    ||||| |||||| | |||||||||||||||||||||||||||||| |||||||||  || | ||||||| || ||||||||||||||||||||||| |||    
T  23257234 gcgacgttgtttgtttttcttgtttctctcaggtatttgattggtccagattgtctaattagcttcgatccactgcagatccaatcaatgactttggcgt 23257333  T
Q  385 catccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||||||||||||||| || |||||||| |||||||||||||||| || |||||||||||||||    
T  23257334 catccacgttgcagatccggatacatgattattccggagatttagatatagtcatatgtgtag 23257396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 166 - 447
Target Start/End: Original strand, 15698228 - 15698506
Alignment:
Q  166 tttctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttg 265  Q
    |||||||||||||||  | ||||||||| |||||||||||||||||||||||||||||||       |||||||||||||||||||||  || |||||||    
T  15698228 tttctaactcgtttttctctttcccttttattgaaataagtgattttcacatctatttcgtttttt-attttgtgatttcgtcgtctttgtgtgacgttg 15698326  T
Q  266 gtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatc 365  Q
    ||| |||| ||||||||| ||||| |||||| | ||| |||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||     
T  15698327 gtt-gttcatcgtctttgggcgacgttgtttgt-tttgttgtttctctcaggtatttgattggttcagattgtcagatcagcttcgatccggtgcagatt 15698424  T
Q  366 caatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||||||||||||||| |||||||||||||||||| ||| | |||||||||||||| |||||||||  |||||||||||||||    
T  15698425 caatcaatgactttggcgtcatccacgttgcagatccaaaaacatggttattccgaagatttaaaaatagtcatatgtgtag 15698506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 233 - 447
Target Start/End: Complemental strand, 38644817 - 38644603
Alignment:
Q  233 attttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttca 332  Q
    ||||||||||||| |||||||| |||||| |||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| |||    
T  38644817 attttgtgatttcttcgtcttcgtgcgacattggtttgttcgtcgtctttgtgcgacattgtttgtttttcttgtttctctcaggtatttgattggctca 38644718  T
Q  333 gattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatg 432  Q
    |||||||||||||  |||||| |||||||||| ||||| |||| | ||  ||||||||||||||||| ||||| ||||||||||||||||||||||||      
T  38644717 gattgtcagatcagtttcgatccagtgcagattcaatccatgattgtggagtcatccacgttgcagatccagagacatggttattccggagatttaaaaa 38644618  T
Q  433 tagtcatatgtgtag 447  Q
    |||||||||||||||    
T  38644617 tagtcatatgtgtag 38644603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 190 - 447
Target Start/End: Original strand, 38646636 - 38646892
Alignment:
Q  190 ctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgac 289  Q
    |||| |||||||||||||||||| |||||||||||        |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  38646636 cttttattgaaataagtgattttaacatctatttc-attttttattttgtgattttgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgac 38646734  T
Q  290 attgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatcc 389  Q
     |||||| | |||||||||||||||| |||||| |  ||||||||||| ||||||| |||||||  |||| ||||| |||||||||||||| ||||||||    
T  38646735 gttgtttgtttttcttgtttctctcatgtatttaaccggttcagattgccagatcagcttcgatctagtgtagatcaaatcaatgactttggcgtcatcc 38646834  T
Q  390 acgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    |||||||||| || || |||||||||||| |||||||||||| |||||||||||||||    
T  38646835 acgttgcagatccggagacatggttattctggagatttaaatatagtcatatgtgtag 38646892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 233 - 447
Target Start/End: Complemental strand, 12967752 - 12967539
Alignment:
Q  233 attttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttca 332  Q
    ||||||||||| |||| || || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  12967752 attttgtgattccgtcatcatcgtgcgacgttggtttgttcgtcgtctttgtgcgacattgtttgtctttcttgtttctctcaggtatttgatcggttca 12967653  T
Q  333 gattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatg 432  Q
    ||||||||||||| ||||||| ||||||| ||||||||||||||||||  ||||||||||||| ||| |  || ||||| |||||||||||| ||||||     
T  12967652 gattgtcagatcagcttcgatccagtgcatatccaatcaatgactttggtgtcatccacgttgtagatctggagacatgattattccggaga-ttaaata 12967554  T
Q  433 tagtcatatgtgtag 447  Q
    |||||||||||||||    
T  12967553 tagtcatatgtgtag 12967539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 185 - 447
Target Start/End: Original strand, 36621399 - 36621659
Alignment:
Q  185 tttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgt 284  Q
    |||| |||| |||||||||||||| ||||||||||||||||        ||||||||||| ||||||||| |||| |||||||||||| |||||||||||    
T  36621399 tttctcttttattgaaataagtgactttcacatctatttcgttttttg-ttttgtgattttgtcgtcttcgtgcggcgttggtttgtttgtcgtctttgt 36621497  T
Q  285 gcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgt 384  Q
    ||||||| |||| | |||||||||||| ||||||||||||| |||||||||||||| |||||||| ||| ||||||| |||||||||||||||||| | |    
T  36621498 gcgacatagtttgtttttcttgtttctttcaggtatttgatcggttcagattgtcacatcaactttgatccagtgcaaatccaatcaatgactttggcat 36621597  T
Q  385 catccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||||||||||||||| || || |||| |||||||| ||||||||||| || ||||||||||||    
T  36621598 catccacgttgcagatccggagacat-gttattccagagatttaaatataatcatatgtgtag 36621659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 168 - 377
Target Start/End: Original strand, 23320470 - 23320678
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    |||||||||||||  ||||||||||| |||||||||||| |||||||||||| || ||       |||||||||||||||||||||| || |||||||||    
T  23320470 tctaactcgtttttctatttcccttttattgaaataagtcattttcacatctgttacgtttttt-attttgtgatttcgtcgtcttcgtgtgacgttggt 23320568  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    |||||||||||||||||||||| || ||| |||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||| |||||||||||||    
T  23320569 ttgttcgtcgtctttgtgcgacgttatttgtctttcttgtttctctcatgtatttgatcggttcagattgtcagatcagcttcgatccagtgcagatcca 23320668  T
Q  368 atcaatgact 377  Q
    ||||||||||    
T  23320669 atcaatgact 23320678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 233 - 446
Target Start/End: Original strand, 28213142 - 28213354
Alignment:
Q  233 attttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttca 332  Q
    |||||||||||| ||||||||  |||| |||| ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| | ||||||    
T  28213142 attttgtgattttgtcgtctttgtgcggcgttagtttgttcgtcgtctttgtgcgacattgtttgtctttcttgtttctttcaggtatttgttcggttca 28213241  T
Q  333 gattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatg 432  Q
    |||||||||||||  |||||| ||||| ||||||||||||||||||||  ||||||||||||||| | || || || |||||||||||||||||| |||     
T  28213242 gattgtcagatcagattcgatccagtgtagatccaatcaatgactttggtgtcatccacgttgca-atccggagacttggttattccggagatttgaata 28213340  T
Q  433 tagtcatatgtgta 446  Q
    ||||| ||||||||    
T  28213341 tagtcgtatgtgta 28213354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 271 - 447
Target Start/End: Complemental strand, 6212896 - 6212720
Alignment:
Q  271 ttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatc 370  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||||||||| | ||||  ||||||||||| |||||||  |||||||||||||||    
T  6212896 ttcgtcgtctttgtgcgacattgtttgtttttcttgtttctctcaggtatttgatcgattcatgttgtcagatcagcttcgatcaagtgcagatccaatc 6212797  T
Q  371 aatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    |||||||||| |||||||||||||| ||| || || ||||||||||||||||||||||||| |||||||||| ||||    
T  6212796 aatgactttggcgtcatccacgttgtagatccggagacatggttattccggagatttaaatatagtcatatgggtag 6212720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 271 - 439
Target Start/End: Complemental strand, 14717252 - 14717084
Alignment:
Q  271 ttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatc 370  Q
    ||||||||||||||||||| |||||| | ||||||||||||||||| |||||||| |||||||||||||||||||  |||||| ||||||||||||||||    
T  14717252 ttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcagatatttgatcggttcagattgtcagatcagattcgatccagtgcagatccaatc 14717153  T
Q  371 aatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcat 439  Q
    |||||| ||| |||||||||||||||||| || || | ||||||||| ||||||||||||| |||||||    
T  14717152 aatgacattggcgtcatccacgttgcagatccggagaaatggttatttcggagatttaaatatagtcat 14717084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 271 - 447
Target Start/End: Original strand, 45659146 - 45659322
Alignment:
Q  271 ttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatc 370  Q
    ||||||||||||||||||| ||| || | |||||||||||||| ||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||    
T  45659146 ttcgtcgtctttgtgcgacgttggttgtttttcttgtttctcttaggtatttgatcggttcagattgtcagatcagcttcgatccagtgcagatccaatc 45659245  T
Q  371 aatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    |||||||||||||||||| |||||| ||| ||  | |||||||||||||  |||||||| | |||||||||||||||    
T  45659246 aatgactttgacgtcatctacgttgtagatccgaaaacatggttattccaaagatttaagtatagtcatatgtgtag 45659322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 167 - 447
Target Start/End: Original strand, 8893322 - 8893600
Alignment:
Q  167 ttctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttgg 266  Q
    ||||||||||||||  | ||||||||| |||||||||||||||||||||||||||||||        ||| |||||||| |||||||  | |||| |||     
T  8893322 ttctaactcgtttttctctttcccttttattgaaataagtgattttcacatctatttcgtcttttc-tttcgtgatttcatcgtcttagtacgacattgt 8893420  T
Q  267 tttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcc 366  Q
     ||| |||||||||||||| | | |||||| ||||||||||||   ||||||||||| | |||||||||| |||||||| ||| ||| ||||||| ||||    
T  8893421 gttgctcgtcgtctttgtgaggcgttgtttgtctttcttgttttgttcaggtatttgttcggttcagattttcagatcagcttagatccagtgcaaatcc 8893520  T
Q  367 aatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||||||||||||||||||| || |||||| ||| || || |||| | ||||||||||| || ||| |||||||||||||||    
T  8893521 aatcaatgactttgacgtcgtcaacgttgtagatccggagacataggtattccggaga-ttgaatatagtcatatgtgtag 8893600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 183 - 447
Target Start/End: Complemental strand, 33703578 - 33703316
Alignment:
Q  183 tatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtcttt 282  Q
    ||||||||||| |||||||||||||||||||||||||||||||        ||| ||||||||||||||||  | || ||||| |||||| |||||||||    
T  33703578 tatttcccttttattgaaataagtgattttcacatctatttcgtttttc--tttcgtgatttcgtcgtcttagtacggcgttgttttgtttgtcgtcttt 33703481  T
Q  283 gtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgac 382  Q
    ||||||| |||||| |||||||||||||  ||| ||||||| ||| |||||||||||||||||  || ||| ||||| ||||| ||||||||||||||      
T  33703480 gtgcgacgttgtttgtctttcttgtttcgttcacgtatttgtttgattcagattgtcagatcaggtttgatccagtgtagatcaaatcaatgactttgga 33703381  T
Q  383 gtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    | | || |||||| ||| ||  | |||||| |||||| |||| |||||| |||||||||||||||    
T  33703380 gccgtcaacgttggagatccgtagacatggatattccagagacttaaatatagtcatatgtgtag 33703316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 199 - 447
Target Start/End: Complemental strand, 27469761 - 27469514
Alignment:
Q  199 aaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgttttt 298  Q
    |||||||| ||||||||||||||||||        ||||||||||||||||||||  |||||||||| ||||||| ||||||||||||||| |||||| |    
T  27469761 aaataagttattttcacatctatttcgttttttc-ttttgtgatttcgtcgtcttagtgcgacgttgttttgttcatcgtctttgtgcgacgttgtttgt 27469663  T
Q  299 ctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcag 398  Q
    ||||||||||||  ||||||| ||| |   || |||||||||||||| ||||||| ||||||||||| |||||||| |||||  ||| || |||||||||    
T  27469662 ctttcttgtttcgttcaggtaattgttcaatttagattgtcagatcagcttcgatccagtgcagatcaaatcaatggctttggagtcgtcaacgttgcag 27469563  T
Q  399 acccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    | || || |||||| |||||  |||| |||||| |||||||| ||||||    
T  27469562 atccggagacatggatattctagagagttaaatatagtcataagtgtag 27469514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 168 - 447
Target Start/End: Complemental strand, 12148132 - 12147854
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    |||||||||||||  ||||||| ||| ||| ||||||||||||||||||||||||| |        ||| |||||| |||||||||  || ||| ||| |    
T  12148132 tctaactcgtttttctatttcctttttattcaaataagtgattttcacatctattttgttttttc-tttcgtgattccgtcgtcttagtgtgactttgtt 12148034  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    |||||||| || ||||||| ||||||||| |||||||||||||  ||||||||||| | | |||||||||||||||||||||||||  |||||||||  |    
T  12148033 ttgttcgttgtttttgtgcaacattgtttgtctttcttgtttcgttcaggtatttgttcgattcagattgtcagatcaacttcgatctagtgcagataaa 12147934  T
Q  368 atcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    |  ||||||||||  ||| || |||||||| | || || |||||| ||||||||||| |||| | |||||||||||||||    
T  12147933 aagaatgactttggagtcgtcaacgttgcaaatccggagacatgggtattccggagacttaagtatagtcatatgtgtag 12147854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 233 - 447
Target Start/End: Original strand, 49651938 - 49652143
Alignment:
Q  233 attttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttca 332  Q
    |||||||||||||||||||||| || |||||| ||||||||||||||||||| |||| |||||| |||||||||||||||||| ||| ||||| |         
T  49651938 attttgtgatttcgtcgtcttcgtgtgacgttcgtttgttcgtcgtctttgtacgacgttgtttgtctttcttgtttctctcaagtaattgatcg----- 49652032  T
Q  333 gattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatg 432  Q
         |||||||| ||||||| || |||| |||||||||||||||||| ||||||| || ||||||| || || |||||||||| | ||||||||||||     
T  49652033 ----ttcagatcagcttcgatccaatgcaaatccaatcaatgactttggcgtcatctacattgcagatcctgagacatggttatcctggagatttaaata 49652128  T
Q  433 tagtcatatgtgtag 447  Q
    |||||||||||||||    
T  49652129 tagtcatatgtgtag 49652143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 234 - 447
Target Start/End: Original strand, 11121071 - 11121284
Alignment:
Q  234 ttttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcag 333  Q
    ||||||||||||||||||||  ||||| ||||  ||||||||| ||||||||| || |||||| ||||||||||||   ||| ||||||| | |||||||    
T  11121071 ttttgtgatttcgtcgtcttagtgcgaggttgtgttgttcgtcatctttgtgcaacgttgtttgtctttcttgttttgttcatgtatttgttcggttcag 11121170  T
Q  334 attgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgt 433  Q
    |||||||||||| ||||||| ||||||||||| ||||||||||||||  ||| || || ||||||| || || ||||   ||||||||||||||||||      
T  11121171 attgtcagatcagcttcgatccagtgcagatcaaatcaatgactttggagtcttcaacattgcagatccggagacatatgtattccggagatttaaatac 11121270  T
Q  434 agtcatatgtgtag 447  Q
    ||||||||||||||    
T  11121271 agtcatatgtgtag 11121284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 186 - 447
Target Start/End: Original strand, 52839578 - 52839838
Alignment:
Q  186 ttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtg 285  Q
    |||||||| ||||||||||||||||||||||| |||||||        ||| ||||||| ||||||||  |||||||||| |||||||||| ||||||||    
T  52839578 ttcccttttattgaaataagtgattttcacatttatttcgttttttc-tttcgtgattttgtcgtcttagtgcgacgttgttttgttcgtcatctttgtg 52839676  T
Q  286 cgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtc 385  Q
     ||| |||||| |||||||||||||  ||||||||||| |  | |||||||||||||||| ||||||| ||||||||||| ||||||||||||||  |||    
T  52839677 agacgttgtttgtctttcttgtttcgttcaggtatttgttcagctcagattgtcagatcagcttcgatccagtgcagatcaaatcaatgactttggagtc 52839776  T
Q  386 atccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
     || |||||||| | |  || |||||| |||| |||| | |||| | ||||| |||||||||    
T  52839777 gtcaacgttgcaaatctggagacatgggtatttcggaaacttaactatagtcgtatgtgtag 52839838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 280 - 447
Target Start/End: Complemental strand, 44513975 - 44513808
Alignment:
Q  280 tttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgacttt 379  Q
    |||||||||| |||||| |||||||||||||  ||||||||||| | | ||||||||||||||||| ||||||| ||||||||||| |||||||||||||    
T  44513975 tttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcgattcagattgtcagatcagcttcgatccagtgcagatcaaatcaatgacttt 44513876  T
Q  380 gacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    |  ||| || |||||||||| || || |||||| ||||||||||| |||||| |||||||||||||||    
T  44513875 ggagtcgtcaacgttgcagatccggagacatgggtattccggagacttaaatatagtcatatgtgtag 44513808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 256 - 399
Target Start/End: Original strand, 10264826 - 10264969
Alignment:
Q  256 tgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattc 355  Q
    ||||||||||||||||||||||||||||||| || |||||| | |||||| ||||  ||||||||||| | | |||||||||||||||||||||||| ||    
T  10264826 tgcgacgttggtttgttcgtcgtctttgtgcaacgttgtttgtttttcttttttcgttcaggtatttgttcgattcagattgtcagatcaacttcgagtc 10264925  T
Q  356 agtgcagatccaatcaatgactttgacgtcatccacgttgcaga 399  Q
    | |||| ||||||||||| ||||||||||| |||||||||||||    
T  10264926 attgcaaatccaatcaataactttgacgtcgtccacgttgcaga 10264969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 233 - 447
Target Start/End: Original strand, 26199674 - 26199888
Alignment:
Q  233 attttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttca 332  Q
    ||||| ||||||| |||||||  |||||| ||| ||||||||||||||||||||||| |||||| |||||||||||||  ||||||||||| | | ||||    
T  26199674 attttttgatttcatcgtcttagtgcgacattgttttgttcgtcgtctttgtgcgacgttgtttatctttcttgtttcgttcaggtatttgttcgattca 26199773  T
Q  333 gattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatg 432  Q
    | ||||||||||| ||||||| |||| || ||| ||||||||||||||| ||| || ||| |||||| ||  | ||||   ||||  ||||| ||||||     
T  26199774 ggttgtcagatcagcttcgatccagtacaaatcaaatcaatgactttgaagtcgtcaacgatgcagatccgaagacatacgtattatggagacttaaata 26199873  T
Q  433 tagtcatatgtgtag 447  Q
    |||||||||||||||    
T  26199874 tagtcatatgtgtag 26199888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 257 - 399
Target Start/End: Complemental strand, 48655037 - 48654895
Alignment:
Q  257 gcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattca 356  Q
    |||||||||||||||||||||||||||| | || |||||| ||||| |||||||  ||| ||||||| || ||||||||||||| || | ||||||||||    
T  48655037 gcgacgttggtttgttcgtcgtctttgtacaacgttgtttgtctttattgtttcgttcatgtatttgtttagttcagattgtcatattagcttcgattca 48654938  T
Q  357 gtgcagatccaatcaatgactttgacgtcatccacgttgcaga 399  Q
    |||||||||||||||||||||||| |||||| || ||||||||    
T  48654937 gtgcagatccaatcaatgactttggcgtcattcatgttgcaga 48654895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 195 - 380
Target Start/End: Complemental strand, 32539247 - 32539062
Alignment:
Q  195 attgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgt 294  Q
    ||||||||||||||||||| ||||||||| |       |||||||||||| ||||||||  | |||||||||||||||||||||||||||||||| ||||    
T  32539247 attgaaataagtgattttcgcatctattttgtttttt-attttgtgattttgtcgtcttagtacgacgttggtttgttcgtcgtctttgtgcgacgttgt 32539149  T
Q  295 ttttctttcttgtttctctcaggtatttg-attggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttg 380  Q
    || | ||| ||||||    || |||||||  ||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||    
T  32539148 ttgtttttattgttttgtccatgtatttgttttggttcagattgtcagatctgcttcgattcagtgcaaatccaatcaatgactttg 32539062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 168 - 447
Target Start/End: Complemental strand, 33177680 - 33177404
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    |||||||| |||| || ||||| ||| |||||||||||||||||||||||| ||||||        ||| |||||||| | |||||  ||||||||||      
T  33177680 tctaactcctttt-ttctttcctttttattgaaataagtgattttcacatccatttcgttttttc-tttcgtgatttcattgtcttagtgcgacgttgtg 33177583  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    ||||||| ||||||||||| || |||||| | ||| ||||||   ||| ||||||| | ||||||||||||||||||||||| ||| |||||||||||||    
T  33177582 ttgttcgccgtctttgtgcaacgttgtttgtgttt-ttgttttgttcatgtatttgttcggttcagattgtcagatcaacttagatccagtgcagatcca 33177484  T
Q  368 atcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    |||||||||||||  ||| || || ||||| | || || |||||  ||||  ||||| || ||| |||||||||||||||    
T  33177483 atcaatgactttggtgtcgtcaacattgcaaatccggagacatgagtattatggagacttgaatatagtcatatgtgtag 33177404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 168 - 309
Target Start/End: Original strand, 1767996 - 1768135
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    ||||| |||||||  | ||||||||| |||||||||| ||||||||||||||||||||       |||||||||||||||||||||| || |||||||||    
T  1767996 tctaattcgtttttctctttcccttttattgaaataaatgattttcacatctatttcgtttttt-attttgtgatttcgtcgtcttcgtgtgacgttggt 1768094  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgttt 309  Q
    | ||||||||||||||||||||||||||| | ||||||||||    
T  1768095 t-gttcgtcgtctttgtgcgacattgtttgtttttcttgttt 1768135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 271 - 417
Target Start/End: Original strand, 900226 - 900371
Alignment:
Q  271 ttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatc 370  Q
    |||||||||||||||| || |||||| ||||| |||||||   ||| ||| || | |||||||||||||| |||||||| ||| |||||| |||||||||    
T  900226 ttcgtcgtctttgtgcaac-ttgtttgtcttttttgtttcgtccagatatctgttcggttcagattgtcatatcaactttgatccagtgcggatccaatc 900324  T
Q  371 aatgactttgacgtcatccacgttgcagacccagatacatggttatt 417  Q
    ||||||||||||||||||||||||| ||| ||||| |||||| ||||    
T  900325 aatgactttgacgtcatccacgttgtagatccagagacatgggtatt 900371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 234 - 447
Target Start/End: Original strand, 2350717 - 2350930
Alignment:
Q  234 ttttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcag 333  Q
    ||||||||||| ||||||||  |||||||||| |||||| ||||||| |||||||| |||||| |||||    |||   |||||| |||| | ||||| |    
T  2350717 ttttgtgatttagtcgtcttagtgcgacgttgttttgttggtcgtctctgtgcgacgttgtttgtcttttcccttttgttcaggtgtttgttcggttcgg 2350816  T
Q  334 attgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgt 433  Q
    |||||||||| | |||| || ||||||| |||||| ||||||||||| ||||||| |||||||||| ||  |  ||| | |||||||||||||| ||| |    
T  2350817 attgtcagattagcttcaatccagtgcaaatccaaccaatgactttggcgtcatcaacgttgcagatccgaaggcatagctattccggagattttaatat 2350916  T
Q  434 agtcatatgtgtag 447  Q
    |||||||| |||||    
T  2350917 agtcatatttgtag 2350930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 168 - 380
Target Start/End: Original strand, 10877376 - 10877587
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    |||||||||||||  | ||||||||| ||||||| |||||||||||| ||||||||||        ||| ||||||||||| ||||  |||||||||| |    
T  10877376 tctaactcgtttttctctttcccttttattgaaaaaagtgattttcatatctatttcgttttttc-tttcgtgatttcgtcatcttagtgcgacgttgtt 10877474  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    |||||||| ||||||||| | | |||||| |||||||||||||  | | ||||| | | |||||| ||||||| ||||  ||| || |||||||||| ||    
T  10877475 ttgttcgttgtctttgtgtggcgttgtttgtctttcttgtttcatttatgtattggttcggttcatattgtcatatcattttcaatccagtgcagattca 10877574  T
Q  368 atcaatgactttg 380  Q
    |||||||||||||    
T  10877575 atcaatgactttg 10877587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 239 - 399
Target Start/End: Complemental strand, 13969657 - 13969494
Alignment:
Q  239 tgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgttttt---ctttcttgtttctctcaggtatttgattggttcagat 335  Q
    ||||||| |||||||  ||||||||||   ||||||||||||||||||| |||| |||||   |||| ||||||   ||| ||||||| | |||||| ||    
T  13969657 tgatttcatcgtcttagtgcgacgttgtgatgttcgtcgtctttgtgcggcattattttttgtctttattgttttgttcaagtatttgttcggttcaaat 13969558  T
Q  336 tgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcaga 399  Q
    ||||| |||| ||| ||| ||||||||||||||||||||||||||||||| || ||||||||||    
T  13969557 tgtcaaatcagcttagatccagtgcagatccaatcaatgactttgacgtcgtcaacgttgcaga 13969494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 166 - 374
Target Start/End: Original strand, 29067078 - 29067284
Alignment:
Q  166 tttctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttg 265  Q
    |||||||||||||||  | ||||||||| |||||||||||||||| |||||||||||||          ||||||||||| || ||||  ||||||||||    
T  29067078 tttctaactcgtttttctctttcccttttattgaaataagtgattctcacatctatttcttcttttc--tttgtgatttcatcttcttagtgcgacgttg 29067175  T
Q  266 gtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatc 365  Q
     ||||||||||||||||||||  | |||||| ||||||||||||   ||| ||||||  | |||||| ||| |||||||| |||||||  |||||| ||     
T  29067176 ttttgttcgtcgtctttgtgcagcgttgtttgtctttcttgttttgttcaagtatttattcggttcaaattttcagatcagcttcgatcaagtgcaaatt 29067275  T
Q  366 caatcaatg 374  Q
    |||||||||    
T  29067276 caatcaatg 29067284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 234 - 447
Target Start/End: Complemental strand, 13691777 - 13691569
Alignment:
Q  234 ttttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcag 333  Q
    ||||||||||||||| ||||  ||||||| |  |||||| |||||||||||| |||||||||||| |  ||||||     ||||| |||| | | |||||    
T  13691777 ttttgtgatttcgtcatcttagtgcgacgctattttgtttgtcgtctttgtgtgacattgtttttttcccttgtt-----caggtgtttgttcgattcag 13691683  T
Q  334 attgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgt 433  Q
    ||||||| |||| |||||||  |||||| ||||||  |||||||||||||||||| |||||||||| |  ||  ||||  |||||| ||||||| ||| |    
T  13691682 attgtcaaatcatcttcgatctagtgcaaatccaactaatgactttgacgtcatcaacgttgcagatctggaggcatgactattccagagattttaatat 13691583  T
Q  434 agtcatatgtgtag 447  Q
    |||||||| |||||    
T  13691582 agtcatatttgtag 13691569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 234 - 399
Target Start/End: Complemental strand, 37685109 - 37684944
Alignment:
Q  234 ttttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcag 333  Q
    ||||||||||||||||||||   |||||| ||  ||  |||||||||||||  ||| |||||| |||||||||||||  |||  |||||| ||| |||||    
T  37685109 ttttgtgatttcgtcgtcttagcgcgacggtgtcttaatcgtcgtctttgtatgacgttgtttgtctttcttgtttcgttcaaatatttgtttgattcag 37685010  T
Q  334 attgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcaga 399  Q
    |||||||||||| ||||||| ||||||||||  ||| ||||||||||  ||| || ||||||||||    
T  37685009 attgtcagatcagcttcgatccagtgcagattaaattaatgactttggagtcgtcaacgttgcaga 37684944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 234 - 399
Target Start/End: Original strand, 37700408 - 37700573
Alignment:
Q  234 ttttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcag 333  Q
    ||||||||||||||||||||   |||||| ||  ||  |||||||||||||  ||| |||||| |||||||||||||  |||  |||||| ||| |||||    
T  37700408 ttttgtgatttcgtcgtcttagcgcgacggtgtcttaatcgtcgtctttgtatgacgttgtttgtctttcttgtttcgttcaaatatttgtttgattcag 37700507  T
Q  334 attgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcaga 399  Q
    |||||||||||| ||||||| ||||||||||  ||| ||||||||||  ||| || ||||||||||    
T  37700508 attgtcagatcagcttcgatccagtgcagattaaattaatgactttggagtcgtcaacgttgcaga 37700573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 271 - 447
Target Start/End: Original strand, 46589279 - 46589456
Alignment:
Q  271 ttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgc-agatccaat 369  Q
    ||||||||||||||||| |  ||||| ||||||||||||| |||| ||||||| | |||||||||||||||||||  ||| ||||||||| | ||| | |    
T  46589279 ttcgtcgtctttgtgcggcggtgtttgtctttcttgtttcgctcaagtatttgttcggttcagattgtcagatcagtttcaattcagtgcaaaatcaatt 46589378  T
Q  370 caatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    |||||||||||  ||| || |||||||||| || || |||||  |||| | |||| |||||| || ||||||||||||    
T  46589379 caatgactttggagtcctcaacgttgcagatccggacacatgagtatttcagagacttaaatatactcatatgtgtag 46589456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 259 - 395
Target Start/End: Original strand, 47392258 - 47392392
Alignment:
Q  259 gacgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagt 358  Q
    ||||||||||||||||||||||||||||| | |||||| ||||| |||||||  |||| |||||| | |||| || || |||||||| ||| ||| ||||    
T  47392258 gacgttggtttgttcgtcgtctttgtgcggcgttgtttgtcttt-ttgtttcgttcagatatttgttcggtttaggttttcagatcagctt-gatccagt 47392355  T
Q  359 gcagatccaatcaatgactttgacgtcatccacgttg 395  Q
    | ||||||||| |||||||||| |||| |||||||||    
T  47392356 gtagatccaataaatgactttggcgtcgtccacgttg 47392392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 185 - 309
Target Start/End: Complemental strand, 40488464 - 40488341
Alignment:
Q  185 tttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgt 284  Q
    ||||||||| ||||||||||  |||||||||||||||||||        ||||||||||||||||||||  |||||||||| |||||| |||||||||||    
T  40488464 tttcccttttattgaaataaacgattttcacatctatttcgttttttc-ttttgtgatttcgtcgtcttagtgcgacgttgttttgtttgtcgtctttgt 40488366  T
Q  285 gcgacattgtttttctttcttgttt 309  Q
    ||||| || | | ||||||||||||    
T  40488365 gcgacgttatctgtctttcttgttt 40488341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 189 - 380
Target Start/End: Complemental strand, 22032153 - 22031964
Alignment:
Q  189 cctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcga 288  Q
    ||||| ||||||||||||| ||||||||||| ||| |       ||||||| ||||| | |||||  ||||| ||||||||||||||||||||| || |     
T  22032153 ccttttattgaaataagtgtttttcacatctcttttgtttttt-attttgtaatttctt-gtcttagtgcgatgttggtttgttcgtcgtctttatgtgg 22032056  T
Q  289 cattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttg 380  Q
    | ||||||  ||||||||||||  || |||||||| |  ||||| ||||||||| ||  |||||| ||||| ||||||||||||||||||||    
T  22032055 cgttgtttgcctttcttgtttcgttccggtatttgttcagttcatattgtcagaccagtttcgatccagtgtagatccaatcaatgactttg 22031964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 271 - 447
Target Start/End: Original strand, 40992440 - 40992606
Alignment:
Q  271 ttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatc 370  Q
    |||||| |||| ||||||| |||||| | |||||||||||||||||||||||||| ||||          ||| |  |||||| |  || |||| |||||    
T  40992440 ttcgtcatcttcgtgcgacgttgtttgtgtttcttgtttctctcaggtatttgatcggtt----------gattagtttcgatccgatgtagatgcaatc 40992529  T
Q  371 aatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    |||||||||| |||||||||||||||||| || || |||||  ||||||||| |||||||| || ||||||||||||    
T  40992530 aatgactttggcgtcatccacgttgcagatccggagacatgaatattccggatatttaaatataatcatatgtgtag 40992606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 234 - 387
Target Start/End: Original strand, 34566783 - 34566934
Alignment:
Q  234 ttttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttcttt--cttgtttctctcaggtatttgattggttc 331  Q
    ||||||||||||||||||||  ||||||  || |||||| |||||||||||||||| |||||| |||||  | || |||    | || |||| | | |||    
T  34566783 ttttgtgatttcgtcgtcttagtgcgaccctgttttgtttgtcgtctttgtgcgacgttgtttgtcttttccctggttc----aagtgtttgttcgattc 34566878  T
Q  332 agattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcat 387  Q
    ||||||||||||||  |||||| |||||||||||||| ||||||||||| ||||||    
T  34566879 agattgtcagatcagtttcgatccagtgcagatccaaccaatgactttggcgtcat 34566934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 168 - 265
Target Start/End: Complemental strand, 14717327 - 14717230
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttg 265  Q
    |||||||||||||  | ||||||||| ||||||||||||||||||||||||||||| |        ||||||||||||||||||||  ||||||||||    
T  14717327 tctaactcgtttttctttttcccttttattgaaataagtgattttcacatctattttgttttttatttttgtgatttcgtcgtctttgtgcgacgttg 14717230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 356 - 452
Target Start/End: Original strand, 47551312 - 47551408
Alignment:
Q  356 agtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtagtcata 452  Q
    |||||||||||||||||||||||||||||| || |||||||||| || || |||||  ||||| ||||| || ||| ||||||||| ||||| ||||    
T  47551312 agtgcagatccaatcaatgactttgacgtcgtcaacgttgcagatccggaaacatgagtattctggagacttgaatatagtcatatttgtaggcata 47551408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 168 - 268
Target Start/End: Original strand, 45659072 - 45659171
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    |||||||||||||  | ||| ||||| ||||||||||||||||||||||||||||||        |||||||||||||||||||||  ||||||||||||    
T  45659072 tctaactcgtttttctctttaccttttattgaaataagtgattttcacatctatttc-attttttattttgtgatttcgtcgtctttgtgcgacgttggt 45659170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 233 - 296
Target Start/End: Original strand, 52752117 - 52752180
Alignment:
Q  233 attttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgttt 296  Q
    |||||||||||| ||||||||| | |||| ||||||||||||||||||||||||||| ||||||    
T  52752117 attttgtgattttgtcgtcttcgtacgacattggtttgttcgtcgtctttgtgcgacgttgttt 52752180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 367 - 447
Target Start/End: Original strand, 1768155 - 1768235
Alignment:
Q  367 aatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    |||||||||||||||||| |||||| ||||||| ||  | |||||||||||| |||||||||||  ||||||||| |||||    
T  1768155 aatcaatgactttgacgttatccacattgcagatccgtaaacatggttattcaggagatttaaacatagtcatatttgtag 1768235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 327 - 447
Target Start/End: Complemental strand, 34659567 - 34659447
Alignment:
Q  327 ggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatt 426  Q
    |||||||||||||| |||| ||| ||| || ||||||||||||||||||||||| |||| || || ||||||| || || | |||| ||||||  ||| |    
T  34659567 ggttcagattgtcatatcagcttagatccaatgcagatccaatcaatgactttggcgtcgtcaacattgcagatccggagatatgggtattccaaagact 34659468  T
Q  427 taaatgtagtcatatgtgtag 447  Q
    | ||| |||||||| ||||||    
T  34659467 tgaatatagtcataagtgtag 34659447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 355 - 447
Target Start/End: Original strand, 26771322 - 26771414
Alignment:
Q  355 cagtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||||||||||||||||||| ||||||| ||| || |||||||||| ||  | |||||  |||| |||||| || ||| |||||||||||||||    
T  26771322 cagtgcagatccaatcaataactttgatgtcgtcaacgttgcagatccgaagacatgaatatttcggagacttgaatatagtcatatgtgtag 26771414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 356 - 455
Target Start/End: Original strand, 12871838 - 12871937
Alignment:
Q  356 agtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtagtcatatgt 455  Q
    ||||||||| | ||||||||||||| | || || |||||||||| ||||| |||||  ||||||||||| || ||| ||||||||  ||||| |||||||    
T  12871838 agtgcagattcgatcaatgactttggcatcgtcaacgttgcagatccagagacatgagtattccggagacttgaatatagtcatacttgtaggcatatgt 12871937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 357 - 431
Target Start/End: Complemental strand, 11877354 - 11877280
Alignment:
Q  357 gtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaat 431  Q
    |||||||||||||||||||||||| || |||| | |||| ||| |||||||||||  |||||| |||| ||||||    
T  11877354 gtgcagatccaatcaatgactttggcgccatcaaagttgtagatccagatacatgaatattccagagacttaaat 11877280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 185 - 296
Target Start/End: Complemental strand, 30853849 - 30853746
Alignment:
Q  185 tttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgt 284  Q
    ||||||||| |||||||||| |||||||||||||||||| |        |||| | ||||||||| |||  |||||||||||||||||| |||| |||||    
T  30853849 tttccctttcattgaaataaatgattttcacatctattttg--------tttttttatttcgtcgccttagtgcgacgttggtttgttcatcgtgtttgt 30853758  T
Q  285 gcgacattgttt 296  Q
    ||| | ||||||    
T  30853757 gcggcgttgttt 30853746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 168 - 265
Target Start/End: Original strand, 40992364 - 40992462
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaa--taagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttg 265  Q
    |||||||||||||  | ||||||||| |||||||  |||||||||||||||| |||||||       |||||||||||||||| ||||| ||||||||||    
T  40992364 tctaactcgtttttctctttcccttttattgaaaaataagtgattttcacatttatttcg-ttttttattttgtgatttcgtcatcttcgtgcgacgttg 40992462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 168 - 221
Target Start/End: Complemental strand, 6212970 - 6212917
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctat 221  Q
    |||||||||||||    ||||||||| |||||||||||||||||||||||||||    
T  6212970 tctaactcgtttttccttttcccttttattgaaataagtgattttcacatctat 6212917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 168 - 225
Target Start/End: Complemental strand, 35077974 - 35077917
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcg 225  Q
    |||||||||||||  | ||||  ||| |||||||||||||||||||||||||||||||    
T  35077974 tctaactcgtttttctctttcatttttattgaaataagtgattttcacatctatttcg 35077917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 168 - 225
Target Start/End: Original strand, 49651865 - 49651922
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcg 225  Q
    |||||||||||||  ||||||| ||| |||||||||| ||| ||||||||||||||||    
T  49651865 tctaactcgtttttctatttcctttttattgaaataaatgaatttcacatctatttcg 49651922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 195 - 253
Target Start/End: Original strand, 900179 - 900236
Alignment:
Q  195 attgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtctt 253  Q
    |||||||||||||||||||||||||||||||       |||||||||||||||||||||    
T  900179 attgaaataagtgattttcacatctatttcg-ttttttattttgtgatttcgtcgtctt 900236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 183 - 223
Target Start/End: Original strand, 26199638 - 26199677
Alignment:
Q  183 tatttccctttaattgaaataagtgattttcacatctattt 223  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  26199638 tatttcccttta-ttgaaataagtgattttcacatctattt 26199677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 168 - 214
Target Start/End: Original strand, 17579798 - 17579844
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttca 214  Q
    |||||||| ||||  | ||||||||||||||||||||||||||||||    
T  17579798 tctaactcatttttctctttccctttaattgaaataagtgattttca 17579844  T

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Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 356 - 397
Target Start/End: Original strand, 29938454 - 29938495
Alignment:
Q  356 agtgcagatccaatcaatgactttgacgtcatccacgttgca 397  Q
    ||||||||||||||||||||||||| ||| ||| ||||||||    
T  29938454 agtgcagatccaatcaatgactttggcgttatcaacgttgca 29938495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 356 - 424
Target Start/End: Original strand, 13152657 - 13152725
Alignment:
Q  356 agtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggaga 424  Q
    ||||||||||| ||||||||||||| ||||||| ||||| |||| | ||| ||||   |||||||||||    
T  13152657 agtgcagatccgatcaatgactttggcgtcatcaacgttacagatcaagagacataagtattccggaga 13152725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 332 - 380
Target Start/End: Original strand, 37662403 - 37662451
Alignment:
Q  332 agattgtcagatcaacttcgattcagtgcagatccaatcaatgactttg 380  Q
    ||||||| |||||| |||||||  ||||||||||||| |||||||||||    
T  37662403 agattgttagatcagcttcgatctagtgcagatccaaccaatgactttg 37662451  T

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Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 183 - 223
Target Start/End: Complemental strand, 44514058 - 44514018
Alignment:
Q  183 tatttccctttaattgaaataagtgattttcacatctattt 223  Q
    ||||||||||| ||||||||||||||||| |||||| ||||    
T  44514058 tatttcccttttattgaaataagtgatttacacatccattt 44514018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 168 - 220
Target Start/End: Original strand, 46589205 - 46589256
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatcta 220  Q
    ||||||||||||| | ||||| |||| ||| ||||||||||||||||||||||    
T  46589205 tctaactcgttttat-atttctcttttattaaaataagtgattttcacatcta 46589256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 186; Significance: 1e-100; HSPs: 73)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 168 - 447
Target Start/End: Complemental strand, 7640440 - 7640162
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    |||||||||||||  ||||||||||| ||||||||||||||||||||||||| || ||       |||||||||||||||||||||| ||||||||||||    
T  7640440 tctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgtttttt-attttgtgatttcgtcgtcttcgtgcgacgttggt 7640342  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| |||||||||||||    
T  7640341 ttgttcgtcgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagattgtcagatcagcttcgatccagtgcagatcca 7640242  T
Q  368 atcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||||||||||||| |||||||||||||||||| || || |||||| |||||||||||||||||| |||||||||||||||    
T  7640241 atcaatgactttggcgtcatccacgttgcagatccggagacatggctattccggagatttaaatatagtcatatgtgtag 7640162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 185 - 445
Target Start/End: Complemental strand, 27024206 - 27023947
Alignment:
Q  185 tttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgt 284  Q
    ||||||||| ||||||||||||||||||||||||||||| |       |||||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  27024206 tttcccttttattgaaataagtgattttcacatctattttgtttttt-attttgtgatttcgtcgtcttcgtgcgacattggtttgttcgtcgtctttgt 27024108  T
Q  285 gcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgt 384  Q
    ||||| |||||| | ||||||||||||||||||||||||||   ||||||||||||||||| ||||||| ||||||||||||||||||||||||||  ||    
T  27024107 gcgacgttgtttgtttttcttgtttctctcaggtatttgatcaattcagattgtcagatcagcttcgatccagtgcagatccaatcaatgactttggagt 27024008  T
Q  385 catccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgt 445  Q
    ||||||||||||||| || |||||||||||||||||||||||||||| |||||||||||||    
T  27024007 catccacgttgcagatccggatacatggttattccggagatttaaatatagtcatatgtgt 27023947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 185 - 447
Target Start/End: Original strand, 25771492 - 25771753
Alignment:
Q  185 tttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgt 284  Q
    ||||||||| ||||||||||||||||||||||||||||| |       |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  25771492 tttcccttttattgaaataagtgattttcacatctattttgtttttt-attttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgt 25771590  T
Q  285 gcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgt 384  Q
    ||||| |||||| | ||||||||||||||||||||||||||  ||||||||||| |||||| ||||||| ||||| ||||||||||||||| |||| |||    
T  25771591 gcgacgttgtttgtttttcttgtttctctcaggtatttgatcagttcagattgttagatcagcttcgatccagtgtagatccaatcaatgattttggcgt 25771690  T
Q  385 catccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||||||||||||||| |  |||||||||||||||||||||||||||| |||||||||||||||    
T  25771691 catccacgttgcagatctggatacatggttattccggagatttaaatatagtcatatgtgtag 25771753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 168 - 447
Target Start/End: Original strand, 25516524 - 25516800
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    |||||||| ||||  ||||||||||| ||||||||||||||||| |||||||||||||       ||||||||||||| |||||||| ||||||||||||    
T  25516524 tctaactcatttttctatttcccttttattgaaataagtgattt-cacatctatttcgtttttt-attttgtgatttcttcgtcttcgtgcgacgttggt 25516621  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    | ||||||||||||||||||||||||||| | |||||||||||||||||||||||||| | ||||||||||||||||| |||| || |||||||||||||    
T  25516622 t-gttcgtcgtctttgtgcgacattgtttgtttttcttgtttctctcaggtatttgatcgcttcagattgtcagatcagcttcaatccagtgcagatcca 25516720  T
Q  368 atcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||||||||||||| |||||||||||||||||| || || |||||| |||||||||||||||||| |||||||||||||||    
T  25516721 atcaatgactttggcgtcatccacgttgcagatccggaaacatggctattccggagatttaaatatagtcatatgtgtag 25516800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 168 - 447
Target Start/End: Original strand, 43566905 - 43567181
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    |||||||||||||  ||||||| ||| ||||||||||||||||| |||||||||||||       |||||||||||||||||||||| ||||||||||||    
T  43566905 tctaactcgtttttctatttcctttttattgaaataagtgattt-cacatctatttcgtttttt-attttgtgatttcgtcgtcttcgtgcgacgttggt 43567002  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    | |||||||||||||||||||| |||||| | ||||||||||||||||||||||| || | ||||||||||||||||| ||||||| |||||||||||||    
T  43567003 t-gttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttaatcgcttcagattgtcagatcagcttcgatccagtgcagatcca 43567101  T
Q  368 atcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    |||||||||||||  ||||||||||||||||| || || ||||||||||||||||||||||||| |||||||||||||||    
T  43567102 atcaatgactttggtgtcatccacgttgcagatccggaaacatggttattccggagatttaaatatagtcatatgtgtag 43567181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 183 - 447
Target Start/End: Original strand, 38822120 - 38822380
Alignment:
Q  183 tatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtcttt 282  Q
    |||||||||||  ||||||||||||||||||||||||||||||       |||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  38822120 tatttcccttttgttgaaataagtgattttcacatctatttcgtttt---attttgtgatttcgtcgtcttcgtgcgacgttggtt-gttcgtcgtcttt 38822215  T
Q  283 gtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgac 382  Q
    ||||||| |||||| | |||||||||||||||||||||||||| | ||||||||| |||||   ||||||| ||||||||||||||||||||||||||||    
T  38822216 gtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcgcttcagattgccagatttgcttcgatccagtgcagatccaatcaatgactttgac 38822315  T
Q  383 gtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    |||||||| |||||||| || || ||||||||||||||||||||||||| |||||||||||||||    
T  38822316 gtcatccatgttgcagatccggaaacatggttattccggagatttaaatatagtcatatgtgtag 38822380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 168 - 447
Target Start/End: Complemental strand, 44167793 - 44167517
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    |||||||||||||  ||||| |||||||||||||||||| |||| |||||||||||||       |||||||||||||||||||||| ||||||||||||    
T  44167793 tctaactcgtttttctattttcctttaattgaaataagtaattt-cacatctatttcgtttttt-attttgtgatttcgtcgtcttcgtgcgacgttggt 44167696  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    | |||||||||||||||||||| |||||| | ||||||||||| ||||| |||||||| | |||| |||||||||||| |||| || |||||||||||||    
T  44167695 t-gttcgtcgtctttgtgcgacgttgtttgtttttcttgtttcgctcagctatttgatcgcttcaaattgtcagatcagcttcaatccagtgcagatcca 44167597  T
Q  368 atcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    |||||||||||||||||||||||||||||||| || || ||||||||||||| ||||||||||| |||||||||||||||    
T  44167596 atcaatgactttgacgtcatccacgttgcagatccggaaacatggttattccagagatttaaatatagtcatatgtgtag 44167517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 168 - 447
Target Start/End: Complemental strand, 27191419 - 27191139
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    |||||||||||||  ||||||||||| ||||||||||||||||| |||||||||||||       |||||||||||||||||||||| | ||||||||||    
T  27191419 tctaactcgtttttctatttcccttttattgaaataagtgattt-cacatctatttcgtttttt-attttgtgatttcgtcgtcttcgtacgacgttggt 27191322  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    | |||||||||||||||||||| |||||| | |||||||||||||||||||||||||| | ||||||||||||||||| ||||||| ||||| |||||||    
T  27191321 t-gttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcgcttcagattgtcagatcagcttcgatccagtgtagatcca 27191223  T
Q  368 atcaatgactttgacgtcatccacgttgcagacc----cagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||||||||||||| |||||||||||||||||| |     | || |||||||||||||||||||||||| |||||||||||||||    
T  27191222 atcaatgactttggcgtcatccacgttgcagatctggaaacatgcatggttattccggagatttaaatatagtcatatgtgtag 27191139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 168 - 447
Target Start/End: Complemental strand, 27841233 - 27840953
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    |||||||||||||  ||||||||||| ||||||||||||||||| |||||||||||||       |||||||||||||||||||||| | ||||||||||    
T  27841233 tctaactcgtttttctatttcccttttattgaaataagtgattt-cacatctatttcgtttttt-attttgtgatttcgtcgtcttcgtacgacgttggt 27841136  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    | |||||||||||||||||||| |||||| | |||||||||||||||||||||||||| | ||||||||||||||||| ||||||| ||||| |||||||    
T  27841135 t-gttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcgcttcagattgtcagatcagcttcgatccagtgtagatcca 27841037  T
Q  368 atcaatgactttgacgtcatccacgttgcagacc----cagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||||||||||||| |||||||||||||||||| |     | || |||||||||||||||||||||||| |||||||||||||||    
T  27841036 atcaatgactttggcgtcatccacgttgcagatctggaaacatgcatggttattccggagatttaaatatagtcatatgtgtag 27840953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 168 - 447
Target Start/End: Original strand, 5930453 - 5930731
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    |||||||||||||  | ||||||||| |||  ||||||||||||||||||||||||||       |||||||||||||||||||||| ||||| ||||||    
T  5930453 tctaactcgtttttctgtttcccttttatttcaataagtgattttcacatctatttcgtttttt-attttgtgatttcgtcgtcttcgtgcgatgttggt 5930551  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    ||||||||||| |||||||||| |||||| | |||||||||||| ||| ||||||||| |||||||||||| |||||| ||||||| |||||||||||||    
T  5930552 ttgttcgtcgtttttgtgcgacgttgtttgtttttcttgtttctatcatgtatttgatcggttcagattgtgagatcagcttcgatccagtgcagatcca 5930651  T
Q  368 atcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    |||||||| ||||  || |||||||||||||| || || ||||||||||||||||||||||||| | |||||||||||||    
T  5930652 atcaatgattttggtgttatccacgttgcagatccggagacatggttattccggagatttaaatatggtcatatgtgtag 5930731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 185 - 447
Target Start/End: Original strand, 3390479 - 3390731
Alignment:
Q  185 tttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgt 284  Q
    ||||||||| ||||||||||||||||||||||||||||| |       |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  3390479 tttcccttttattgaaataagtgattttcacatctattttgtttttt-attttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgt 3390577  T
Q  285 gcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgt 384  Q
    ||||| ||||||         ||||||||||||||||||||  |||||||||||||||| | ||||||| |||||||||||||||||||||||||| |||    
T  3390578 gcgacgttgttt---------gtttctctcaggtatttgatcagttcagattgtcagataagcttcgatccagtgcagatccaatcaatgactttggcgt 3390668  T
Q  385 catccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||||||||||||||| || |||||||||||||||||||||||||||| |||  ||||||||||    
T  3390669 catccacgttgcagatccggatacatggttattccggagatttaaatatagctatatgtgtag 3390731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 233 - 447
Target Start/End: Original strand, 36508024 - 36508237
Alignment:
Q  233 attttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttca 332  Q
    |||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||| |||||| | ||||||||||||||||||||||||||   ||||    
T  36508024 attttgtgatttcgtcgtcttcgtgcgacgttggtt-gttcgttgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcacttca 36508122  T
Q  333 gattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatg 432  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||| |||||||||||||||||| || || ||||||||||||| |||||||||||     
T  36508123 gattgtcagatcagcttcgatccagtgcagatccaatcaatgactttggcgtcatccacgttgcagatccggaaacatggttattccagagatttaaata 36508222  T
Q  433 tagtcatatgtgtag 447  Q
    |||||||||||||||    
T  36508223 tagtcatatgtgtag 36508237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 168 - 439
Target Start/End: Original strand, 6089923 - 6090190
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    ||||| |||||||  ||||||||||| |||||||||||||||||||||||||||||||       |||||||||||||||||||||| ||||| ||||||    
T  6089923 tctaattcgtttttctatttcccttttattgaaataagtgattttcacatctatttcgtttt---attttgtgatttcgtcgtcttcgtgcgatgttggt 6090019  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    | |||| || |||||||||||| |||||| | ||||||||||||||||| |||||||| | ||||||||||||||||| ||||||| ||||||| |||||    
T  6090020 t-gttcatcttctttgtgcgacgttgtttgtttttcttgtttctctcagatatttgatcgcttcagattgtcagatcagcttcgatccagtgcatatcca 6090118  T
Q  368 atcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcat 439  Q
    ||||||||||||   ||||||||||||||||| || || ||||||||||||| ||||||||||| |||||||    
T  6090119 atcaatgactttagtgtcatccacgttgcagatccggaaacatggttattccagagatttaaatatagtcat 6090190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 196 - 447
Target Start/End: Original strand, 3603043 - 3603293
Alignment:
Q  196 ttgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtt 295  Q
    ||||||||||||||||||| ||||||||||       ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||||    
T  3603043 ttgaaataagtgattttcatatctatttcgtttttt-attttgtgatttcatcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtt 3603141  T
Q  296 tttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttg 395  Q
    | | |   ||||||||||||| ||||||||  ||||| ||||  | |||||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  3603142 tgtttggtttgtttctctcagatatttgatccgttcaaattgctatatcaacttcgatccagtgcagatccaatcaatgactttgacgtcatccatgttg 3603241  T
Q  396 cagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    |||| ||  | ||||||||||||||||||||||||| |||||||||||||||    
T  3603242 cagatccgaagacatggttattccggagatttaaatatagtcatatgtgtag 3603293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 246 - 447
Target Start/End: Complemental strand, 43929307 - 43929106
Alignment:
Q  246 gtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatca 345  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||| |||||||||||| ||||||    
T  43929307 gtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtctttcttgtttctatcaggtatttgatcggttcagattgttagatca 43929208  T
Q  346 acttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgt 445  Q
      ||||||  ||||||||| ||||||||||||||| |||||||||||||||||| || || |||||  |||||||||||||||||| |||||||||||||    
T  43929207 gtttcgatcaagtgcagattcaatcaatgactttggcgtcatccacgttgcagatccggagacatgactattccggagatttaaatatagtcatatgtgt 43929108  T
Q  446 ag 447  Q
    ||    
T  43929107 ag 43929106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 168 - 447
Target Start/End: Original strand, 41176892 - 41177166
Alignment:
Q  168 tctaactcgttttgt-tatttccctttaattgaaataagtgat--tttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgtt 264  Q
    ||||||||||||| | |||||| |||| |||||||||||||||  ||||||||||||||||       ||||||||||||| ||||      ||||||||    
T  41176892 tctaactcgttttttctatttctcttttattgaaataagtgatgatttcacatctatttcgtttttt-attttgtgatttcttcgt------gcgacgtt 41176984  T
Q  265 ggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagat 364  Q
    |||| |||||||||||||||||||| |||||| | |||||||||||||||| ||||||||| | |||| |||||||||||| ||||||| ||||||||||    
T  41176985 ggtt-gttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaagtatttgatcgcttcaaattgtcagatcagcttcgatccagtgcagat 41177083  T
Q  365 ccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    |||||||||||||||| ||||||||||||||||||  |  | ||||||||||||||||||||||||| || ||||||||||||    
T  41177084 ccaatcaatgactttggcgtcatccacgttgcagattcgaaaacatggttattccggagatttaaatatattcatatgtgtag 41177166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 271 - 447
Target Start/End: Original strand, 3465061 - 3465237
Alignment:
Q  271 ttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatc 370  Q
    ||||||||||||||||||| |||||| | |||||||||||||||| ||||||||| | ||||||||||||||||| ||||||| ||||||||||||||||    
T  3465061 ttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaagtatttgatcgcttcagattgtcagatcagcttcgatccagtgcagatccaatc 3465160  T
Q  371 aatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||||| |||| |||||||||||||||||| ||||| ||||||||||| ||||||||||||| |||||||||||||||    
T  3465161 aatgattttggcgtcatccacgttgcagatccagaaacatggttatttcggagatttaaatatagtcatatgtgtag 3465237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 185 - 367
Target Start/End: Complemental strand, 16880032 - 16879851
Alignment:
Q  185 tttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgt 284  Q
    ||||||||| ||||||||||||||||||||||| ||||| |       || |||||||||| |||||||| |||||||||||||||||||||||||||||    
T  16880032 tttcccttttattgaaataagtgattttcacatttattttgtttttt-atcttgtgatttcatcgtcttcgtgcgacgttggtttgttcgtcgtctttgt 16879934  T
Q  285 gcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    ||||| |||||| | |||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  16879933 gcgacgttgtttgtttttcttgtttctctcaggtatttgatcggttcagattgtcagatcaacttcgatccagtgcagatcca 16879851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 185 - 367
Target Start/End: Complemental strand, 16992165 - 16991984
Alignment:
Q  185 tttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgt 284  Q
    ||||||||| ||||||||||||||||||||||| ||||| |       || |||||||||| |||||||| |||||||||||||||||||||||||||||    
T  16992165 tttcccttttattgaaataagtgattttcacatttattttgtttttt-atcttgtgatttcatcgtcttcgtgcgacgttggtttgttcgtcgtctttgt 16992067  T
Q  285 gcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    ||||| |||||| | |||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  16992066 gcgacgttgtttgtttttcttgtttctctcaggtatttgatcggttcagattgtcagatcaacttcgatccagtgcagatcca 16991984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 242 - 379
Target Start/End: Original strand, 44951522 - 44951659
Alignment:
Q  242 tttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcag 341  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||| |||||| | |||||||||||||||||||||||||| |||||||||||||||    
T  44951522 tttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtacgacgttgtttgtttttcttgtttctctcaggtatttgatcggttcagattgtcag 44951621  T
Q  342 atcaacttcgattcagtgcagatccaatcaatgacttt 379  Q
    |||| ||||||| |||||||||||||||||||||||||    
T  44951622 atcagcttcgatccagtgcagatccaatcaatgacttt 44951659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 170 - 447
Target Start/End: Complemental strand, 25623127 - 25622850
Alignment:
Q  170 taactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggttt 269  Q
    |||||||||||  | ||||||||| ||||||||||||||||||||||||||||| |        ||| ||||||||||||||||  |||||| ||| |||    
T  25623127 taactcgtttttctctttcccttttattgaaataagtgattttcacatctattttgttttttc-tttcgtgatttcgtcgtcttagtgcgacattgtttt 25623029  T
Q  270 gttcgtcgtctttgtgcgacattgtttttctttc-ttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaa 368  Q
    |||||||||||||||||| | |||||| |||||| ||||||  |||||||||||  | |||||||||||||| |||| ||| |||||||||||||| |||    
T  25623028 gttcgtcgtctttgtgcggcgttgtttgtctttccttgttttactcaggtattttttcggttcagattgtcatatcagcttagattcagtgcagattcaa 25622929  T
Q  369 tcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||||||||||||||||| || ||||| ||||  |  | |||||  ||||||||||| || ||| |||||||||||||||    
T  25622928 tcaatgactttgacgtcgtcaacgttacagattcgaagacatgagtattccggagactttaatatagtcatatgtgtag 25622850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 183 - 447
Target Start/End: Complemental strand, 7443635 - 7443372
Alignment:
Q  183 tatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtcttt 282  Q
    ||||| ||||| |||||||||||| ||||||||||||||||||        ||| ||||||||| ||||||  |||||||||| ||||||||||||||||    
T  7443635 tattttccttttattgaaataagtaattttcacatctatttcgtttttgc-tttcgtgatttcgccgtcttagtgcgacgttgttttgttcgtcgtcttt 7443537  T
Q  283 gtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgac 382  Q
    ||||||| |||||| ||||||||||||   || |||||||| | |||||||||||| |||||| |||| || ||||||||||| ||||||||||||||      
T  7443536 gtgcgacgttgtttgtctttcttgttttgttcgggtatttgttcggttcagattgtaagatcagcttcaatccagtgcagatcaaatcaatgactttgga 7443437  T
Q  383 gtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    |||||| |||||||||| || || | | || ||||||||| | |||||| || ||||||||||||    
T  7443436 gtcatcaacgttgcagatccggagataagggtattccggaaacttaaatataatcatatgtgtag 7443372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 243 - 447
Target Start/End: Complemental strand, 16720858 - 16720654
Alignment:
Q  243 ttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcaga 342  Q
    |||||||||||  ||||||||| |||||||||||||||||||| ||| |||||| | ||||||||| || ||||||||||| | |||||||||| ||| |    
T  16720858 ttcgtcgtctttgtgcgacgttagtttgttcgtcgtctttgtgtgacgttgtttgtttttcttgttactttcaggtatttgttcggttcagattatcaaa 16720759  T
Q  343 tcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatg 442  Q
    ||| ||| |||   |||||||||||||||| || |||| | |||||||||||||||| ||||||||||| |||||| ||||| |||||| ||||||||||    
T  16720758 tcagctttgatctcgtgcagatccaatcaacgattttggcttcatccacgttgcagatccagatacatgattattctggagacttaaatatagtcatatg 16720659  T
Q  443 tgtag 447  Q
    |||||    
T  16720658 tgtag 16720654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 168 - 447
Target Start/End: Complemental strand, 19581087 - 19580808
Alignment:
Q  168 tctaactcgttttgtt-atttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttgg 266  Q
    ||||||||||||| || |||||||||| |||||||||||||||||||| |||||||||         ||| ||||||| ||||||||  |||||| |||     
T  19581087 tctaactcgttttttttatttcccttttattgaaataagtgattttcatatctatttcattttttc-tttcgtgattttgtcgtcttagtgcgacattgt 19580989  T
Q  267 tttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcc 366  Q
    ||||||||||||||||||||||| |||||| | ||| ||||||   ||||||||||| | | ||||||||||||||||| ||||||| ||||||| |||     
T  19580988 tttgttcgtcgtctttgtgcgacgttgtttgttttttttgttttgttcaggtatttgttcgattcagattgtcagatcagcttcgatccagtgcatatca 19580889  T
Q  367 aatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||||||||||||||  ||  || |||||||||| || || |||||| ||||||||||| |||||| || |||||| |||||    
T  19580888 aatcaatgactttggagttgtcaacgttgcagatccggagacatggatattccggagacttaaatataatcatatctgtag 19580808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 189 - 447
Target Start/End: Complemental strand, 9715607 - 9715350
Alignment:
Q  189 cctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcga 288  Q
    ||||| |||||||||||||||||||||||||||||||       |||||||||||||||||||||  | | |||||| |||||| ||| ||||||||||     
T  9715607 ccttttattgaaataagtgattttcacatctatttcgtttttt-attttgtgatttcgtcgtcttagtacaacgttgatttgtttgtcatctttgtgcgg 9715509  T
Q  289 cattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatc 388  Q
    |||||||| |||||||||||||  ||||||||||| |||||||| ||||||| ||||  ||| || ||||||| |||||||||||||||||| |||  ||    
T  9715508 cattgtttgtctttcttgtttcgttcaggtatttgtttggttcaaattgtcatatcagattcaatccagtgcatatccaatcaatgactttggcgttctc 9715409  T
Q  389 cacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||||||| | | ||||| |||| | ||||||| ||| || ||| |||||| | ||||||    
T  9715408 cacgttgtaaatccagagacatagatattccgcagacttgaatatagtcaaacgtgtag 9715350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 243 - 443
Target Start/End: Original strand, 10589199 - 10589399
Alignment:
Q  243 ttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcaga 342  Q
    |||||||||||  |||||||||| ||||||||||||||||||||||| |||||| ||||||||||||   || |||||||| | |||||||| |||||||    
T  10589199 ttcgtcgtctttgtgcgacgttgttttgttcgtcgtctttgtgcgacgttgtttgtctttcttgttttgttcgggtatttgttcggttcagagtgtcaga 10589298  T
Q  343 tcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatg 442  Q
    ||| ||| ||| ||||||||||| ||||||||||||||  |||||| |||||||||| || || ||| || ||||||| ||| |||||| ||||||||||    
T  10589299 tcagctttgatccagtgcagatcaaatcaatgactttggagtcatcaacgttgcagatccggagacaagggtattccgaagacttaaatatagtcatatg 10589398  T
Q  443 t 443  Q
    |    
T  10589399 t 10589399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 170 - 447
Target Start/End: Original strand, 26491335 - 26491609
Alignment:
Q  170 taactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggttt 269  Q
    |||||| ||||  ||||||||||| ||||||||||||||||| ||||||||||||         ||| ||||||||||||||||  |||||||||| |||    
T  26491335 taactcatttttctatttcccttttattgaaataagtgattt-cacatctatttcattttttc-tttcgtgatttcgtcgtcttagtgcgacgttgtttt 26491432  T
Q  270 gttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaat 369  Q
    |||  ||||||||||| ||| |||||| | |||||||||||  |||| |||||| | | ||||||||||||||||| |||||||  |||||||||| |||    
T  26491433 gtttttcgtctttgtgtgacgttgtttgtgtttcttgtttcgttcag-tatttgttcgattcagattgtcagatcagcttcgatctagtgcagatcaaat 26491531  T
Q  370 caatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    |||||||||||  ||| || |||||||||| || || ||||||  |||||||||| |||||| |||||||||||||||    
T  26491532 caatgactttggagtcgtcaacgttgcagatccggagacatgggcattccggagacttaaatatagtcatatgtgtag 26491609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 168 - 431
Target Start/End: Original strand, 29734219 - 29734482
Alignment:
Q  168 tctaactcgttttgt-tatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttgg 266  Q
    ||||||||||||| | ||||||||||| |||||||||||||||||||||| ||||||||        ||| ||||||| ||||||||  || |||||||     
T  29734219 tctaactcgttttttctatttcccttttattgaaataagtgattttcacacctatttcgctttttc-tttcgtgattttgtcgtcttagtgtgacgttgt 29734317  T
Q  267 tttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcc 366  Q
    |||||| |||||| |||| |||| |||||| || |||| |||||  ||| | ||||| | | ||||||||||||||||||||||||| |||||||||||     
T  29734318 tttgtttgtcgtcgttgtacgacgttgtttgtccttctggtttcgttcaaggatttgttcgattcagattgtcagatcaacttcgatccagtgcagatca 29734417  T
Q  367 aatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaat 431  Q
    ||||||||||||||  ||| || |||||| ||| || || |||||  ||||||||||| ||||||    
T  29734418 aatcaatgactttggagtcgtcaacgttgaagatccggagacatgagtattccggagacttaaat 29734482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 234 - 447
Target Start/End: Complemental strand, 5071389 - 5071176
Alignment:
Q  234 ttttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcag 333  Q
    ||||||||||||||| ||||  ||| |||||| |||||| |||||||||||||||| |||||| |||||  | | |   |||||| |||| | |||||||    
T  5071389 ttttgtgatttcgtcatcttagtgcaacgttgttttgtttgtcgtctttgtgcgactttgtttgtcttttctctcttgttcaggtgtttgttcggttcag 5071290  T
Q  334 attgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgt 433  Q
    ||||||||||||||||||||  |||| |||||||| | ||||||||| ||||||| |||||||||| || ||  ||||| ||||||||| |||| ||| |    
T  5071289 attgtcagatcaacttcgatctagtgtagatccaaccgatgactttggcgtcatcaacgttgcagatccggaggcatggctattccggatattttaatat 5071190  T
Q  434 agtcatatgtgtag 447  Q
    |||||||| |||||    
T  5071189 agtcatatttgtag 5071176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 168 - 384
Target Start/End: Original strand, 19953600 - 19953814
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    |||||||||||||  | ||||||||| |||||||||||||||||||||||||||||||        ||| || |||||||||||||  | ||||||||      
T  19953600 tctaactcgtttttctctttcccttttattgaaataagtgattttcacatctatttcgttttttc-tttcgtaatttcgtcgtcttagtacgacgttgtg 19953698  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    ||||| |||||||||||||| | |||||| ||||||||||||   ||| ||||||| | ||||||||||||||||||| |||  || || ||||||| ||    
T  19953699 ttgtttgtcgtctttgtgcggcgttgtttgtctttcttgttttgttcaagtatttgttcggttcagattgtcagatcatcttaaatccaatgcagat-ca 19953797  T
Q  368 atcaatgactttgacgt 384  Q
    |||||||||||||||||    
T  19953798 atcaatgactttgacgt 19953814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 234 - 447
Target Start/End: Complemental strand, 2251364 - 2251153
Alignment:
Q  234 ttttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttcttt---cttgtttctctcaggtatttgattggtt 330  Q
    ||||||||||||||||||||  ||||||| || |||||| |||||||||||||||| |||||| |||||   ||||||      |||| |||| |   ||    
T  2251364 ttttgtgatttcgtcgtcttagtgcgacgctgttttgtttgtcgtctttgtgcgacgttgtttgtcttttcccttgttg-----aggtgtttgttcaatt 2251270  T
Q  331 cagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaa 430  Q
    ||||||||||||||| ||||||| ||||||| |||||| ||||||||||| ||||||| |||||||||| ||  |  |||||||||||||||||||| ||    
T  2251269 cagattgtcagatcagcttcgatccagtgcaaatccaaccaatgactttggcgtcatcaacgttgcagatccgaaggcatggttattccggagattttaa 2251170  T
Q  431 tgtagtcatatgtgtag 447  Q
    | ||||||||| |||||    
T  2251169 tatagtcatatttgtag 2251153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 168 - 447
Target Start/End: Original strand, 37883683 - 37883961
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    ||||| |||||||  ||||||| ||| ||| |||||||||||||| ||||||||||||        ||| ||| |||||| |||||  |||||||||| |    
T  37883683 tctaattcgtttttctatttcctttttattaaaataagtgattttaacatctatttcgttttttc-tttcgtggtttcgttgtcttagtgcgacgttgtt 37883781  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    |||||||||||||||||||||  |||||| |||||||||||||  | | ||||||| | | |||||||||||| |||| ||| ||| || |||||||| |    
T  37883782 ttgttcgtcgtctttgtgcgatgttgtttgtctttcttgtttcgttgacgtatttgttcgattcagattgtcatatcagctttgatccaatgcagatcaa 37883881  T
Q  368 atcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    |||||||||||||  ||| || ||||||||||  | || |||||  |||||  || | |||||| |||||||||||||||    
T  37883882 atcaatgactttggagtcgtcaacgttgcagatacggagacatgagtattctagatacttaaatatagtcatatgtgtag 37883961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 246 - 447
Target Start/End: Complemental strand, 4878743 - 4878542
Alignment:
Q  246 gtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatca 345  Q
    ||||||||  ||||| |||| ||||||||||||||||||||||| |||||| ||||||||| |||  | ||||||||| | |||||||||||||| ||||    
T  4878743 gtcgtctttgtgcgatgttgttttgttcgtcgtctttgtgcgacgttgtttgtctttcttgcttcgtttaggtatttgttcggttcagattgtcatatca 4878644  T
Q  346 acttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgt 445  Q
     ||||||| ||||||||||| ||||||||||||||   ||||| | ||||||||    || ||||   |||||||| || |||||| |||||||||||||    
T  4878643 gcttcgatccagtgcagatcaaatcaatgactttggactcatcaatgttgcagatatggagacatcagtattccggtgacttaaatatagtcatatgtgt 4878544  T
Q  446 ag 447  Q
    ||    
T  4878543 ag 4878542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 183 - 447
Target Start/End: Complemental strand, 15674030 - 15673774
Alignment:
Q  183 tatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtcttt 282  Q
    ||||||||||| ||||||||||||||||| | |||||||||||        |||||||||||| |||||||  |||||| |        |||||||||||    
T  15674030 tatttcccttttattgaaataagtgatttacccatctatttcgtttcttt-ttttgtgatttcatcgtcttagtgcgacctg-------tcgtcgtcttt 15673939  T
Q  283 gtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgac 382  Q
    ||||||| |||||| |||||||||||||  |||||| |||| | | |||||||||||| |||| ||||||| ||||  ||||| ||||||||||||||      
T  15673938 gtgcgacgttgtttgtctttcttgtttcgttcaggtttttgttcgattcagattgtcatatcagcttcgatccagtatagatcaaatcaatgactttgga 15673839  T
Q  383 gtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||| || | |||||||| |  || |||||| ||||||||||| |||||| |||||||||||||||    
T  15673838 gtcgtcaatgttgcagatctggagacatggatattccggagacttaaatatagtcatatgtgtag 15673774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 168 - 438
Target Start/End: Complemental strand, 29812699 - 29812430
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    |||||||| ||||  | ||| ||||| ||||||||||||||||| |||||||||||||        ||| ||||||||||||||||  |||||||| | |    
T  29812699 tctaactcatttttctctttaccttttattgaaataagtgatttccacatctatttcgtttttttctttcgtgatttcgtcgtcttagtgcgacgt-gtt 29812601  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    ||||||||||||||||||||   ||||||||||||||||||||  |||||||| || | ||||| |||||| | ||||  || ||| |||||||||||||    
T  29812600 ttgttcgtcgtctttgtgcggtgttgtttttctttcttgtttcattcaggtatgtgttcggttcggattgttatatcagtttagatccagtgcagatcca 29812501  T
Q  368 atcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtca 438  Q
    |||||||| ||||   || || |||||||||| ||  | |||||| |||||| ||||  ||||| ||||||    
T  29812500 atcaatgattttggaatcgtcaacgttgcagatccgaagacatgggtattccagagacataaatatagtca 29812430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 196 - 446
Target Start/End: Original strand, 13268631 - 13268879
Alignment:
Q  196 ttgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtt 295  Q
    ||||||||||||||||||||||||||||||        ||| ||| ||| ||||||||  |||||||||| ||||||||||||||||||||||| |||||    
T  13268631 ttgaaataagtgattttcacatctatttcgtttttc--tttcgtggttttgtcgtcttagtgcgacgttgttttgttcgtcgtctttgtgcgacgttgtt 13268728  T
Q  296 tttctttcttgtttc-tctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgtt 394  Q
    | ||||| | ||||| ||| ||||||||  | | ||||||||||||||||||||| ||| || |||| |||||||||| ||||||| |||| || |||||    
T  13268729 tgtctttttcgtttcgtct-aggtatttattcgattcagattgtcagatcaactttgatccaatgcatatccaatcaacgactttggcgtcttcaacgtt 13268827  T
Q  395 gcagacccagatacatggttattccggagatttaaatgtagtcatatgtgta 446  Q
    | ||| || |  |||||  |||||| |||| || ||| |||||| |||||||    
T  13268828 gaagatccggggacatgagtattccagagacttgaatatagtcacatgtgta 13268879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 170 - 309
Target Start/End: Original strand, 41841982 - 41842118
Alignment:
Q  170 taactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggttt 269  Q
    |||||||||||  | ||||||||| ||||||||||| |||||||||||||||||||        ||||||||||||||||||||  ||||||||||||||    
T  41841982 taactcgtttttctctttcccttttattgaaataagcgattttcacatctatttcgtttct---ttttgtgatttcgtcgtcttagtgcgacgttggttt 41842078  T
Q  270 gttcgtcgtctttgtgcgacattgtttttctttcttgttt 309  Q
    |||||||||||||||||  | |||||| ||||||||||||    
T  41842079 gttcgtcgtctttgtgctgcgttgtttgtctttcttgttt 41842118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 238 - 379
Target Start/End: Original strand, 24500586 - 24500727
Alignment:
Q  238 gtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattg 337  Q
    ||||||| ||||||||  |||||| ||  ||||||||||||||||||||||| |||||| ||||||||||||   ||| ||||||| | ||||||||||     
T  24500586 gtgatttggtcgtcttagtgcgaccttattttgttcgtcgtctttgtgcgacgttgtttgtctttcttgttttgttcatgtatttgttcggttcagatta 24500685  T
Q  338 tcagatcaacttcgattcagtgcagatccaatcaatgacttt 379  Q
    |||||||| ||||||| ||||||||||| ||| |||||||||    
T  24500686 tcagatcagcttcgatccagtgcagatcaaatgaatgacttt 24500727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 233 - 395
Target Start/End: Original strand, 28228316 - 28228478
Alignment:
Q  233 attttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttca 332  Q
    ||||| ||||||||| ||| |  ||||| ||||||||||||||  ||||||||||   |||||| |||||||||||||  ||| ||||||| | ||||||    
T  28228316 attttatgatttcgttgtcatagtgcgatgttggtttgttcgttatctttgtgcggttttgtttgtctttcttgtttcgttcaagtatttgttcggttca 28228415  T
Q  333 gattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttg 395  Q
    |||||||| |||| ||| ||| || ||||||||||||||||||||||| ||||  ||||||||    
T  28228416 gattgtcatatcagctttgatccaatgcagatccaatcaatgactttggcgtcgcccacgttg 28228478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 238 - 441
Target Start/End: Original strand, 35353742 - 35353942
Alignment:
Q  238 gtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacatt-gt-ttttctttcttgtttctctcaggtatttgattggttcagat 335  Q
    ||||||||||||||||  |||||||||| |||||| |||||||||||||||| || || |||||  |||||||     ||||| |||| |  | | ||||    
T  35353742 gtgatttcgtcgtcttagtgcgacgttgttttgtttgtcgtctttgtgcgacgtttgtcttttccctcttgtt-----caggtgtttgttcagattagat 35353836  T
Q  336 tgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtag 435  Q
    |||||||||| ||||||| |||||||||||||| ||||||||||| ||||||| |||||||||| || ||  ||||  |||| ||||||||| ||| |||    
T  35353837 tgtcagatcatcttcgatccagtgcagatccaaccaatgactttggcgtcatcaacgttgcagatccggaggcatgactatttcggagattttaatatag 35353936  T
Q  436 tcatat 441  Q
    ||||||    
T  35353937 tcatat 35353942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 238 - 446
Target Start/End: Complemental strand, 3397994 - 3397786
Alignment:
Q  238 gtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattg 337  Q
    ||||||||||||||||  |||||| ||| |||||  ||| |||||||||||| |||||| |||||    | |   |||||| |||| |   |||||||||    
T  3397994 gtgatttcgtcgtctttgtgcgacattgttttgtctgtcatctttgtgcgactttgtttatcttttccctcttgttcaggtgtttgttcaattcagattg 3397895  T
Q  338 tcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtc 437  Q
    |||||||| ||||||| |||||||||| ||| ||||||||||| ||||||| || ||||||| || || |||||| |||| ||||||||| ||| |||||    
T  3397894 tcagatcatcttcgatccagtgcagattcaaccaatgactttggcgtcatcaacattgcagatccggagacatggctatttcggagattttaatatagtc 3397795  T
Q  438 atatgtgta 446  Q
    |||| ||||    
T  3397794 atatttgta 3397786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 260 - 399
Target Start/End: Complemental strand, 11550589 - 11550449
Alignment:
Q  260 acgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtg 359  Q
    |||||| |||||| |||||||||||||| | || ||| |||||||||||||  ||| ||||||| | |||||||||||||||| |||||| ||| |||||    
T  11550589 acgttgttttgtttgtcgtctttgtgcggcgttttttgtctttcttgtttcgttcaagtatttgttcggttcagattgtcagaacaacttagatccagtg 11550490  T
Q  360 cagatcc-aatcaatgactttgacgtcatccacgttgcaga 399  Q
     |||||| |||||||||||||| |||| || ||||||||||    
T  11550489 tagatccaaatcaatgactttggcgtcgtcaacgttgcaga 11550449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 185 - 379
Target Start/End: Complemental strand, 25237393 - 25237205
Alignment:
Q  185 tttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgt 284  Q
    |||||||||  ||||||||||| ||||||||||||||||||        |||  |||||||||||||||  |||||||||| ||||||||||||||||||    
T  25237393 tttcccttttgttgaaataagttattttcacatctatttcgttttttc-tttcatgatttcgtcgtcttagtgcgacgttgttttgttcgtcgtctttgt 25237295  T
Q  285 gcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgacttt 379  Q
    |||||||||||| |     || ||||  || |||||||| | | ||||| ||| ||||||| |||| || |||||||||| ||||||||||||||    
T  25237294 gcgacattgtttgt-----ttttttcgttcgggtatttgttcgattcaggttgccagatcagcttcaatccagtgcagattcaatcaatgacttt 25237205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 367 - 447
Target Start/End: Complemental strand, 18141367 - 18141287
Alignment:
Q  367 aatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    |||||||||||||| |||| ||||||||||||| || || ||||||||||||||||||||||||| |||||||||||||||    
T  18141367 aatcaatgactttggcgtcctccacgttgcagatccggagacatggttattccggagatttaaatatagtcatatgtgtag 18141287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 168 - 345
Target Start/End: Original strand, 40125419 - 40125595
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    ||||||| |||||  |||||| |||| ||||||||| ||||||||||||||||||| |       |||||||||||| ||| ||||  ||| |||||| |    
T  40125419 tctaacttgtttttctatttctcttttattgaaatacgtgattttcacatctattttgtttttt-attttgtgattttgtcatcttagtgcaacgttgtt 40125517  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatca 345  Q
    |||||  ||||||||||||||| || ||| |||||||||||||  ||||||||||  | | |||||||||||||||||    
T  40125518 ttgtttttcgtctttgtgcgacgttctttgtctttcttgtttcgttcaggtatttattcgattcagattgtcagatca 40125595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 168 - 289
Target Start/End: Complemental strand, 43929440 - 43929320
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    |||||||||||||  ||||||||||| |||||||||||| |||||||||| | || ||       |||||||||||||||||||||| |||||| |||||    
T  43929440 tctaactcgtttttgtatttcccttttattgaaataagtcattttcacatatgttacgtttttt-attttgtgatttcgtcgtcttcgtgcgacattggt 43929342  T
Q  268 ttgttcgtcgtctttgtgcgac 289  Q
    |||||||||||||| |||||||    
T  43929341 ttgttcgtcgtcttcgtgcgac 43929320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 291 - 420
Target Start/End: Original strand, 20036534 - 20036663
Alignment:
Q  291 ttgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatcca 390  Q
    |||||| |||||||||||||  ||||||||||| |  ||||||||||||||||   ||||||| |||||||||||||||||||||||||| || | || |    
T  20036534 ttgtttgtctttcttgtttcgttcaggtatttgttcagttcagattgtcagattggcttcgatccagtgcagatccaatcaatgactttggcgccgtcaa 20036633  T
Q  391 cgttgcagacccagatacatggttattccg 420  Q
    ||||||||| ||  | |||||| |||||||    
T  20036634 cgttgcagatccgaagacatgggtattccg 20036663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 168 - 443
Target Start/End: Complemental strand, 42105836 - 42105576
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    |||||||||||||  ||||||||||| |||||||||||||| |||||||||||||| |        ||||||||||||||||||||  | | |||||| |    
T  42105836 tctaactcgtttttctatttcccttttattgaaataagtgactttcacatctattttgttttttc-ttttgtgatttcgtcgtcttagtacaacgttgtt 42105738  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    ||||||||            |  |||||| | ||| |||||||  ||||||||||| | | |||| ||||||| |||| ||||||||||||||||||| |    
T  42105737 ttgttcgt------------atgttgtttgt-tttgttgtttcgttcaggtatttgttcgattcaaattgtcaaatcagcttcgattcagtgcagatcaa 42105651  T
Q  368 atcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgt 443  Q
    |||||||||||||  ||  || |||||||||| | | | |||||||||||||||||| |||||| || ||||||||    
T  42105650 atcaatgactttggagttgtcaacgttgcagatcga-agacatggttattccggagacttaaatataatcatatgt 42105576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 329 - 447
Target Start/End: Complemental strand, 31125303 - 31125185
Alignment:
Q  329 ttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagattta 428  Q
    |||||||||||| ||||||||||||| |||| |||||||||||||||||||| ||||||| | ||||||||  | ||  ||||  ||||||||||||||     
T  31125303 ttcagattgtcatatcaacttcgatttagtgtagatccaatcaatgactttggcgtcatcaatgttgcagattcggaggcatgactattccggagatttt 31125204  T
Q  429 aatgtagtcatatgtgtag 447  Q
    ||| |||| |||| |||||    
T  31125203 aatatagttatatttgtag 31125185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 241 - 397
Target Start/End: Complemental strand, 17068927 - 17068772
Alignment:
Q  241 atttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtca 340  Q
    |||| ||||||||  |||||||||| |||||||||||||||||||||   |||||| ||||| |||||||  |  ||||||| |||  || | ||||| |    
T  17068927 attttgtcgtcttagtgcgacgttgttttgttcgtcgtctttgtgcggtgttgtttgtcttttttgtttcgtttgggtattt-attcctttaaattgtta 17068829  T
Q  341 gatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgca 397  Q
    ||||| |||| || ||||||||||| || |||||| ||||||||| || ||||||||    
T  17068828 gatcagcttcaatccagtgcagatcaaaacaatgattttgacgtcgtcgacgttgca 17068772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 256 - 397
Target Start/End: Complemental strand, 17118810 - 17118670
Alignment:
Q  256 tgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattc 355  Q
    |||||||||| |||||||||||||||||||||   |||||| ||||| |||||||  |  ||||||| |||  || |||||||||||||| |||| ||      
T  17118810 tgcgacgttgttttgttcgtcgtctttgtgcggtgttgtttgtcttttttgtttcgtttgggtattt-attcctttagattgtcagatcagcttcaatct 17118712  T
Q  356 agtgcagatccaatcaatgactttgacgtcatccacgttgca 397  Q
    |||||||||| || |||||| ||||||||  || ||||||||    
T  17118711 agtgcagatcaaaacaatgattttgacgttgtcaacgttgca 17118670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 241 - 397
Target Start/End: Complemental strand, 17074924 - 17074769
Alignment:
Q  241 atttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtca 340  Q
    |||| ||||||||  |||||||||| ||||| |||||||||||||||   |||||| ||||| |||||||  |  ||||||| |||  || | ||||| |    
T  17074924 attttgtcgtcttagtgcgacgttgttttgtccgtcgtctttgtgcggtgttgtttgtcttttttgtttcgtttgggtattt-attcctttaaattgtta 17074826  T
Q  341 gatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgca 397  Q
    ||||| |||| || ||||||||||| || |||||| ||||||||| || ||||||||    
T  17074825 gatcagcttcaatccagtgcagatcaaaacaatgattttgacgtcgtcgacgttgca 17074769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 183 - 225
Target Start/End: Original strand, 10589084 - 10589126
Alignment:
Q  183 tatttccctttaattgaaataagtgattttcacatctatttcg 225  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  10589084 tatttcccttttattgaaataagtgattttcacatctatttcg 10589126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 331 - 447
Target Start/End: Original strand, 12366060 - 12366176
Alignment:
Q  331 cagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaa 430  Q
    |||||||||| |||| ||||||| ||||||| ||| | ||||||||||||  |||| | | |||||||| || || |||||  |||||||| || |||||    
T  12366060 cagattgtcaaatcagcttcgatgcagtgcaaatcaattcaatgactttggagtcaccaatgttgcagatccggagacatgagtattccggtgacttaaa 12366159  T
Q  431 tgtagtcatatgtgtag 447  Q
    | | |||||||||||||    
T  12366160 tattgtcatatgtgtag 12366176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 185 - 225
Target Start/End: Original strand, 34480003 - 34480043
Alignment:
Q  185 tttccctttaattgaaataagtgattttcacatctatttcg 225  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  34480003 tttcccttttattgaaataagtgattttcacatctatttcg 34480043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 371 - 447
Target Start/End: Original strand, 34480197 - 34480273
Alignment:
Q  371 aatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    |||||||||| |||||||||||||||||| || || |||||  |||||||| || || ||| |||||||||||||||    
T  34480197 aatgactttggcgtcatccacgttgcagatccggagacatgagtattccggcgacttgaatatagtcatatgtgtag 34480273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 169 - 265
Target Start/End: Original strand, 3464990 - 3465083
Alignment:
Q  169 ctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttg 265  Q
    ||||||||||||  ||||| ||||| ||||||||||||||  |||||||||||||||       |||||||||||||||||||||  ||||||||||    
T  3464990 ctaactcgtttttctattttccttttattgaaataagtga--ttcacatctatttcg-ttttttattttgtgatttcgtcgtctttgtgcgacgttg 3465083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 356 - 455
Target Start/End: Original strand, 15920091 - 15920190
Alignment:
Q  356 agtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtagtcatatgt 455  Q
    ||||||||||| ||||||||||||| |||| || |||||||||| || || |||||  |||| || ||| || ||| ||||||||| ||||| |||||||    
T  15920091 agtgcagatccgatcaatgactttggcgtcgtcaacgttgcagatccggaaacatgagtatttcgaagacttgaatatagtcatatttgtaggcatatgt 15920190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 327 - 441
Target Start/End: Complemental strand, 803014 - 802900
Alignment:
Q  327 ggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatt 426  Q
    |||||||||||| ||| || |||||||  |||||||||| ||||||||||||||  ||| || | |||| ||| |||||||||||  | |||| ||||||    
T  803014 ggttcagattgttagaccatcttcgatcaagtgcagatctaatcaatgactttggtgtcgtcaaagttgtagatccagatacatgactgttccagagatt 802915  T
Q  427 taaatgtagtcatat 441  Q
    | ||| | |||||||    
T  802914 tgaatatggtcatat 802900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 409 - 447
Target Start/End: Complemental strand, 9207200 - 9207162
Alignment:
Q  409 atggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  9207200 atggttattccggagatttaaatatagtcatatgtgtag 9207162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 271 - 441
Target Start/End: Original strand, 38105355 - 38105525
Alignment:
Q  271 ttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatc 370  Q
    ||||||||||| ||||||| ||| || |||||| ||| |   |||||  |||| | ||||||| |||||| | || ||||||| ||||| ||||| || |    
T  38105355 ttcgtcgtcttagtgcgacgttgcttgtctttcctgtcttgttcaggcgtttgttcggttcaggttgtcataccatcttcgatacagtgaagatctaaac 38105454  T
Q  371 aatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatat 441  Q
    ||||||||||| ||| || | |||| ||| || ||||||||  |||||| ||||||| ||| | |||||||    
T  38105455 aatgactttgatgtcgtcaaagttgtagatccggatacatgactattccagagattttaatttggtcatat 38105525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 243 - 289
Target Start/End: Complemental strand, 43929338 - 43929292
Alignment:
Q  243 ttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgac 289  Q
    |||||||||||| ||||||||||||||||| |||||||| |||||||    
T  43929338 ttcgtcgtcttcgtgcgacgttggtttgtttgtcgtcttcgtgcgac 43929292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 356 - 441
Target Start/End: Original strand, 34471183 - 34471268
Alignment:
Q  356 agtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatat 441  Q
    ||||||||||||||||||||||||| |||  || |||||||||| | ||| |||||  |||||||||||  | ||| |||||||||    
T  34471183 agtgcagatccaatcaatgactttggcgttgtcaacgttgcagatctagagacatgagtattccggagacatgaatatagtcatat 34471268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 241 - 385
Target Start/End: Complemental strand, 17095497 - 17095354
Alignment:
Q  241 atttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtca 340  Q
    |||| ||||||||  |||||||||| ||||||||||||||||||||    |||||| ||||| |||||||  |  ||||||| |||  || ||||||| |    
T  17095497 attttgtcgtctttgtgcgacgttgttttgttcgtcgtctttgtgcagtgttgtttgtcttttttgtttcgtttgggtattt-attcctttagattgtta 17095399  T
Q  341 gatcaacttcgattcagtgcagatccaatcaatgactttgacgtc 385  Q
    ||||| |||| ||  |||||||||| || |||| | |||||||||    
T  17095398 gatcagcttcaatctagtgcagatcaaaacaattattttgacgtc 17095354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 239 - 286
Target Start/End: Complemental strand, 16720918 - 16720871
Alignment:
Q  239 tgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgc 286  Q
    |||||||||||||||  ||||||||||||||||||| |||| ||||||    
T  16720918 tgatttcgtcgtctttgtgcgacgttggtttgttcgccgtccttgtgc 16720871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 441
Target Start/End: Original strand, 35333742 - 35333813
Alignment:
Q  370 caatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatat 441  Q
    ||||||||||||||||||| |||||||||| || || |||||  ||||||| |||  ||||| |||||||||    
T  35333742 caatgactttgacgtcatcaacgttgcagatccggagacatgagtattccgaagacataaatatagtcatat 35333813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 168 - 223
Target Start/End: Original strand, 44441416 - 44441471
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctattt 223  Q
    |||||||||||||  | |||| |||| || ||||||||||||||||||||||||||    
T  44441416 tctaactcgtttttatctttctcttttatcgaaataagtgattttcacatctattt 44441471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 259 - 297
Target Start/End: Original strand, 10589187 - 10589225
Alignment:
Q  259 gacgttggtttgttcgtcgtctttgtgcgacattgtttt 297  Q
    ||||||| ||||||||||||||||||||||| |||||||    
T  10589187 gacgttgttttgttcgtcgtctttgtgcgacgttgtttt 10589225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 238 - 288
Target Start/End: Complemental strand, 31269110 - 31269060
Alignment:
Q  238 gtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcga 288  Q
    ||||||||||||||||  |||||| ||| |||||||||| |||||||||||    
T  31269110 gtgatttcgtcgtcttagtgcgacattgttttgttcgtcttctttgtgcga 31269060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 233 - 310
Target Start/End: Complemental strand, 44562649 - 44562574
Alignment:
Q  233 attttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttc 310  Q
    ||||||||||||||| ||||   || || ||||||||||||||||||||||||||   |||||| |||||||| ||||    
T  44562649 attttgtgatttcgtagtctg--tgtgatgttggtttgttcgtcgtctttgtgcggtgttgtttatctttcttatttc 44562574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 385
Target Start/End: Complemental strand, 12183257 - 12183200
Alignment:
Q  328 gttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtc 385  Q
    ||||| ||||| ||||||||||||||  |||||| || |||| |||||||||||||||    
T  12183257 gttcatattgttagatcaacttcgatcaagtgcaaattcaataaatgactttgacgtc 12183200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 233 - 281
Target Start/End: Original strand, 11931008 - 11931056
Alignment:
Q  233 attttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctt 281  Q
    ||||||||||||| |||||||  || ||||||||||||||||| |||||    
T  11931008 attttgtgatttcatcgtcttagtgtgacgttggtttgttcgttgtctt 11931056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 325 - 373
Target Start/End: Original strand, 45033149 - 45033197
Alignment:
Q  325 ttggttcagattgtcagatcaacttcgattcagtgcagatccaatcaat 373  Q
    ||||||||||||||| ||| | ||| |||||||||||||| ||||||||    
T  45033149 ttggttcagattgtcggattagctttgattcagtgcagattcaatcaat 45033197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 181; Significance: 1e-97; HSPs: 67)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 185 - 447
Target Start/End: Original strand, 40775314 - 40775575
Alignment:
Q  185 tttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgt 284  Q
    ||||||||| ||||||||||||||||||||||||||||| |       |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  40775314 tttcccttttattgaaataagtgattttcacatctattttgtttttt-attttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgt 40775412  T
Q  285 gcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgt 384  Q
    ||||| |||||| | |||||||||||||||||||||||||| ||||||||||||||||||| |||||||  ||||||||||||||||||||||||| |||    
T  40775413 gcgacgttgtttgtttttcttgtttctctcaggtatttgatcggttcagattgtcagatcagcttcgatctagtgcagatccaatcaatgactttggcgt 40775512  T
Q  385 catccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||| |||||||||||||||    
T  40775513 catccacgttgcagatccagagacatggttattccggagatttaaatatagtcatatgtgtag 40775575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 168 - 447
Target Start/End: Complemental strand, 26017742 - 26017464
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    ||||| ||||||| |||||||||||| ||||||||||||||||||||||||| || ||       |||||||||||||||||||||| ||||| ||||||    
T  26017742 tctaattcgtttttttatttcccttttattgaaataagtgattttcacatctgttacgtttttt-attttgtgatttcgtcgtcttcgtgcgatgttggt 26017644  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||    
T  26017643 ttgttcgtcgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagattgtcatatcagcttcgatccagtgcagatcca 26017544  T
Q  368 atcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||||||||||||| |||||| ||||||||| |  | || |||||| |||||||||||||||||| |||||||||||||||    
T  26017543 atcaatgactttggcgtcattcacgttgcaaattcggagacatggctattccggagatttaaatatagtcatatgtgtag 26017464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 168 - 446
Target Start/End: Complemental strand, 30992907 - 30992630
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    ||||||| |||||  ||||||||||| ||||||||||||||||||||||||| || ||       |||||||||||| ||||||||| |||||||||| |    
T  30992907 tctaacttgtttttctatttcccttttattgaaataagtgattttcacatctgttacgtttttt-attttgtgattttgtcgtcttcgtgcgacgttgat 30992809  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    |||||||||||||||||||||| |||||| ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||  ||||||||||||    
T  30992808 ttgttcgtcgtctttgtgcgacgttgtttgtctttcttggttctctcaggtatttgatcggttcagattgtcagatcaacttcgatctagtgcagatcca 30992709  T
Q  368 atcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgta 446  Q
    ||||||||||||||| |||||||||||||||| || ||  ||||| |||||||||||||||||| ||||||||||||||    
T  30992708 atcaatgactttgacatcatccacgttgcagatccggaggcatggctattccggagatttaaatatagtcatatgtgta 30992630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 168 - 447
Target Start/End: Original strand, 7985922 - 7986200
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    |||||||||||||  | ||||||||  |||||||||| |||||||||||||||||||        |||||||||||||||| ||||| || |||||||||    
T  7985922 tctaactcgtttttctctttcccttctattgaaataaatgattttcacatctatttc-attttgtattttgtgatttcgtcatcttcgtgtgacgttggt 7986020  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    |||||||||||||||||| ||| |||||| | ||||||||||||||||||||||||||  ||||||||||||| |||| ||||||| |||||||||||||    
T  7986021 ttgttcgtcgtctttgtgtgacgttgtttgtttttcttgtttctctcaggtatttgatccgttcagattgtcaaatcagcttcgatccagtgcagatcca 7986120  T
Q  368 atcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    |||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||| ||||| || ||||||    
T  7986121 atcaatgactttgacgtcatccacgttgcagatccgaatacatggttattccggagatttaaatatagtcctaagtgtag 7986200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 168 - 447
Target Start/End: Original strand, 47749764 - 47750042
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    |||| ||||||||  | ||||||||| |||||||||||||||||||||||||||||||       ||||||||||||||| |||||| ||||||||||||    
T  47749764 tctatctcgtttttctctttcccttttattgaaataagtgattttcacatctatttcgtttttt-attttgtgatttcgttgtcttcgtgcgacgttggt 47749862  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    |||||||||||||||||||||| |||||| | |||||||||||||||||||||||||| |||||||||||||||||||  |||||| |||||||||||||    
T  47749863 ttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcggttcagattgtcagatcagtttcgatccagtgcagatcca 47749962  T
Q  368 atcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||| ||||||| | || |||||| |||||||| |  || |||||||||||||| |||||||||| |||||||||||||||    
T  47749963 atcgatgacttcggcggcatccatgttgcagatctggagacatggttattccgaagatttaaatatagtcatatgtgtag 47750042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 168 - 447
Target Start/End: Complemental strand, 8611706 - 8611430
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    |||||||||||||  ||||||||||| ||||||||||||||||| ||||||||||| |       |||||||||||||||||||||| ||||||||||||    
T  8611706 tctaactcgtttttctatttcccttttattgaaataagtgattt-cacatctattttgtttttt-attttgtgatttcgtcgtcttcgtgcgacgttggt 8611609  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    | ||| |||||||||||||||| |||||| | ||||||||||||||||||| |||||| | |||||||||||| |||| ||||||| |||||||||||||    
T  8611608 t-gttagtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtgtttgatcgcttcagattgtcatatcagcttcgatccagtgcagatcca 8611510  T
Q  368 atcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    |||||| |||||| |||||||||||||||||| || || ||||||||||||| ||||||||||| |||||||||||||||    
T  8611509 atcaataactttggcgtcatccacgttgcagatccggaaacatggttattccagagatttaaatatagtcatatgtgtag 8611430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 168 - 447
Target Start/End: Original strand, 49166957 - 49167233
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    ||||||| |||||  ||||||||||| ||||||||||||||||| |||||||||||||       |||| ||||||||||||||||| ||||||||||||    
T  49166957 tctaacttgtttttctatttcccttttattgaaataagtgattt-cacatctatttcgtttttt-atttcgtgatttcgtcgtcttcgtgcgacgttggt 49167054  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    | |||||||||||||||||||| |||||| | ||||||||||||| |||||||||||| | |||||||||| |||||| ||||||| ||||||||||| |    
T  49167055 t-gttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcccaggtatttgatcgcttcagattgttagatcagcttcgatccagtgcagatcta 49167153  T
Q  368 atcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||||||||||||  |||||||||||||||||| || || ||||||||||||||||||||||||| |||||||||||||||    
T  49167154 atcaatgactttagcgtcatccacgttgcagatccggaaacatggttattccggagatttaaatatagtcatatgtgtag 49167233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 168 - 447
Target Start/End: Complemental strand, 135229 - 134951
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    |||||||| ||||  | ||||||||| ||||||||| ||||||||||||||||||||        |||||||||||||||||||||| ||||||||||||    
T  135229 tctaactcatttttctctttcccttttattgaaataggtgattttcacatctatttc-attttgtattttgtgatttcgtcgtcttcgtgcgacgttggt 135131  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    ||||||||||| |||||||||| ||||||   |||||||||||||| ||||||||||| |||||||||||||| |||| ||||||| |||||||||||||    
T  135130 ttgttcgtcgtttttgtgcgacgttgtttgattttcttgtttctcttaggtatttgatcggttcagattgtcaaatcagcttcgatccagtgcagatcca 135031  T
Q  368 atcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||||||||||||| |||||||||||||||||| |  || ||||||||||| || | |||||||| |||||||||||||||    
T  135030 atcaatgactttggcgtcatccacgttgcagatctggagacatggttatttcgaatatttaaatatagtcatatgtgtag 134951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 172 - 447
Target Start/End: Original strand, 11001880 - 11002151
Alignment:
Q  172 actcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgt 271  Q
    |||||||||  |||||| |||| | |||||||||| |||||||||||||||| |       |||||||||||||||||||||| || |||||||||| ||    
T  11001880 actcgtttttctatttcgcttttaatgaaataagtaattttcacatctattttgtttt---attttgtgatttcgtcgtcttcgtgagacgttggtt-gt 11001975  T
Q  272 tcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatca 371  Q
    ||||||||||||||| || |||||| | |||||||||||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||| |||||    
T  11001976 tcgtcgtctttgtgcaacgttgtttgtttttcttgtttctctcaggtatttgatcgcttcagattgtcagatcagcttcgattcagtgcagatctaatca 11002075  T
Q  372 atgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||||||||| |||||| ||||||| ||| ||  | ||||||||||||||||||||||||| |||||||||||||||    
T  11002076 atgactttggcgtcattcacgttgtagatccgaaaacatggttattccggagatttaaatatagtcatatgtgtag 11002151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 168 - 447
Target Start/End: Original strand, 42490732 - 42491011
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgatttt-cacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttgg 266  Q
    |||||||||||||  | ||||||||| || ||||||||||||||| |||||||||||||       ||||||||||||| |||||||| || ||||||||    
T  42490732 tctaactcgtttttctttttcccttttatcgaaataagtgatttttcacatctatttcgttcttt-attttgtgatttcatcgtcttcgtgtgacgttgg 42490830  T
Q  267 tttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcc 366  Q
    ||||||||| | |||||||||||||||||| | |||||||||||||||||||||||||| |||||||| |||||||||| |||||||  |||||||||||    
T  42490831 tttgttcgttgcctttgtgcgacattgtttgtttttcttgtttctctcaggtatttgatcggttcagactgtcagatcagcttcgatctagtgcagatcc 42490930  T
Q  367 aatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    | ||||||||| || |||||||||||||||||| || || ||| |||||||||||| |||||||| |||| ||||||||||    
T  42490931 agtcaatgactgtggcgtcatccacgttgcagatccggagacacggttattccggatatttaaatatagtaatatgtgtag 42491011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 168 - 446
Target Start/End: Complemental strand, 43807234 - 43806957
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    |||||||||||||  |||||| |||| ||| |||||||  |||||||||||| || ||       |||||||||||||||||||||| ||||| ||||||    
T  43807234 tctaactcgtttttctatttctcttttattaaaataagcaattttcacatctgttacgtatttt-attttgtgatttcgtcgtcttcgtgcgatgttggt 43807136  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    ||||||||| |||||||||||| |||||| ||||||||||||||||||||| |||||| |||||||||||| |||||| |||||||  ||||||||||||    
T  43807135 ttgttcgtcatctttgtgcgacgttgtttgtctttcttgtttctctcaggtgtttgatcggttcagattgtaagatcagcttcgatctagtgcagatcca 43807036  T
Q  368 atcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgta 446  Q
    ||||||||||||| || ||||||||||||||| || || | |||| ||||||||| |||||||| ||||||||||||||    
T  43807035 atcaatgactttggcggcatccacgttgcagatccggagatatggctattccggatatttaaatatagtcatatgtgta 43806957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 170 - 447
Target Start/End: Original strand, 40476741 - 40477015
Alignment:
Q  170 taactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggttt 269  Q
    |||||||||||  ||||| ||||| |||||||||||| |||| |||||||||||||       |||||||||||||||||||||| | | |||||||||     
T  40476741 taactcgtttttctattttccttttattgaaataagttattt-cacatctatttcgtttttt-attttgtgatttcgtcgtcttcgtacaacgttggtt- 40476837  T
Q  270 gttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaat 369  Q
    |||||||||||||||||||| |||||| | ||||||||||||||||||||||||||   ||||||||||||||||| |||||||  ||||||||||||||    
T  40476838 gttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcacttcagattgtcagatcagcttcgatcaagtgcagatccaat 40476937  T
Q  370 caatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    |||||||||||||||||||||||||| ||| || || | ||| ||||||||||||||||||| |||| ||||||||||    
T  40476938 caatgactttgacgtcatccacgttgtagatccggaaatatgattattccggagatttaaatatagtaatatgtgtag 40477015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 185 - 444
Target Start/End: Original strand, 8319362 - 8319620
Alignment:
Q  185 tttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgt 284  Q
    ||||| ||| ||| ||||||||||||||||||| ||||| |       |||||||||||| ||||||||| | |||||||||||||||||||||||||||    
T  8319362 tttccattttattaaaataagtgattttcacatatatttagtttttt-attttgtgattttgtcgtcttcgtacgacgttggtttgttcgtcgtctttgt 8319460  T
Q  285 gcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgt 384  Q
    || || |||||| |||||||||||||||||||| ||||||| |||||||||||| |||||| ||| ||| ||||||||| |||||||||||||||| |||    
T  8319461 gcaaccttgtttgtctttcttgtttctctcaggcatttgatcggttcagattgttagatcagctttgatccagtgcagacccaatcaatgactttggcgt 8319560  T
Q  385 catccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtg 444  Q
    ||||||||||||||| || || |||||||| |||||||||||| ||| ||| ||||||||    
T  8319561 catccacgttgcagatccggagacatggttgttccggagatttgaatatagccatatgtg 8319620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 168 - 444
Target Start/End: Original strand, 24475373 - 24475657
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    |||||||||||||  ||||||||||| ||||||||||||||||| |||||||||||||       |||||||||||||||||||  | ||||||||||||    
T  24475373 tctaactcgtttttctatttcccttttattgaaataagtgattt-cacatctatttcgtttttt-attttgtgatttcgtcgtccacgtgcgacgttggt 24475470  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    | |||||||||||||||||||| |||||| | |||||||||||||||||||||||||| | ||||||||||||||||| ||||||| |||||||||| ||    
T  24475471 t-gttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcgcttcagattgtcagatcagcttcgatccagtgcagattca 24475569  T
Q  368 atcaatgactttgacgtcatccacgttgca-----------gacccagatacatggttattccggagatttaaatgtagtcatatgtg 444  Q
    ||||||||||||| ||||||||||||||||           || ||  | ||||||||||||||||||||||||| ||||||||||||    
T  24475570 atcaatgactttggcgtcatccacgttgcatccacattgcagatccgaaaacatggttattccggagatttaaatatagtcatatgtg 24475657  T

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Target: chr7; HSP #15
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 168 - 444
Target Start/End: Original strand, 24470425 - 24470709
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    |||||||||||||  ||||||||||| ||||||||||||||||| |||||||||||||       ||||||||||||| |||||  | ||||||||||||    
T  24470425 tctaactcgtttttctatttcccttttattgaaataagtgattt-cacatctatttcgtttttt-attttgtgatttcatcgtcaacgtgcgacgttggt 24470522  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    | |||||||||||||||||||| |||||| | |||||||||||||||||||||||||| | ||||||||||||||||| ||||||| |||||||||| ||    
T  24470523 t-gttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcgcttcagattgtcagatcagcttcgatccagtgcagattca 24470621  T
Q  368 atcaatgactttgacgtcatccacgttgca-----------gacccagatacatggttattccggagatttaaatgtagtcatatgtg 444  Q
    ||||||||||||| ||||||||||||||||           || ||  | ||||||||||||||||||||||||| ||||||||||||    
T  24470622 atcaatgactttggcgtcatccacgttgcatccacattgcagatccgaaaacatggttattccggagatttaaatatagtcatatgtg 24470709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 183 - 447
Target Start/End: Original strand, 47156439 - 47156693
Alignment:
Q  183 tatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtcttt 282  Q
    ||||| ||||| |||||||||||||||||||||||||||||||       |||||||||||||||||||||| || |||||||||| |||||||||||||    
T  47156439 tattttccttttattgaaataagtgattttcacatctatttcgtttt---attttgtgatttcgtcgtcttcgtgtgacgttggtt-gttcgtcgtcttt 47156534  T
Q  283 gtgcgacattgtttttctttcttgtttctctcaggtatttgat---tggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgacttt 379  Q
    |||| || ||||||         ||||||||||||||||||||   || |||||||||||| |||||||||||| ||||||||||| |||||||||||||    
T  47156535 gtgcaacgttgttt---------gtttctctcaggtatttgatgaatgcttcagattgtcatatcaacttcgatacagtgcagatctaatcaatgacttt 47156625  T
Q  380 gacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    |   |||||||||||||||| || || ||||||||||||||||||||||||| |||||||||||||||    
T  47156626 ggtatcatccacgttgcagatccggaaacatggttattccggagatttaaatatagtcatatgtgtag 47156693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 168 - 399
Target Start/End: Complemental strand, 23732477 - 23732247
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    |||||||||||||  | ||||  ||| ||||||||| ||||||||||||||||||| |       |||||||||||||||||||||| ||||||||||||    
T  23732477 tctaactcgtttttctctttctattttattgaaatatgtgattttcacatctattttgtttttt-attttgtgatttcgtcgtcttcgtgcgacgttggt 23732379  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    ||||||||| |||||||||| |  ||||| |||||||||||||  ||||||||||| | |||||||||||||| || | ||||||| |||||||||||||    
T  23732378 ttgttcgtcatctttgtgcgtcgctgtttgtctttcttgtttcgttcaggtatttggtcggttcagattgtcaaattagcttcgatccagtgcagatcca 23732279  T
Q  368 atcaatgactttgacgtcatccacgttgcaga 399  Q
    ||||||||||||| |||| |||||||||||||    
T  23732278 atcaatgactttggcgtcgtccacgttgcaga 23732247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 183 - 447
Target Start/End: Original strand, 28015402 - 28015665
Alignment:
Q  183 tatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtcttt 282  Q
    ||||||||||| ||||||||||||||||| |||||||||||||        ||||||||||||||||||||  |||||| ||| ||||||||||||||||    
T  28015402 tatttcccttttattgaaataagtgatttacacatctatttcgttccttt-ttttgtgatttcgtcgtcttaatgcgaccttgttttgttcgtcgtcttt 28015500  T
Q  283 gtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgac 382  Q
    ||||||| ||||||  ||||||||||||  ||||||||||| | |||||||||||| |||||| ||||||| ||||||||||| ||||||||||||||      
T  28015501 gtgcgacgttgtttgcctttcttgtttcgttcaggtatttgttcggttcagattgttagatcagcttcgatccagtgcagatcaaatcaatgactttgga 28015600  T
Q  383 gtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||| || || ||||||| || || |||| | ||||| ||||  |||||| || ||||||||||||    
T  28015601 gtcgtcaacattgcagatccggagacataggtattctggaggcttaaatatattcatatgtgtag 28015665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 168 - 380
Target Start/End: Complemental strand, 25855304 - 25855093
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    |||||||||||||  | ||||||||| |||||||||||||||||||| ||||||||||       |||||||||||| ||||||||| ||||||||||||    
T  25855304 tctaactcgtttttctctttcccttttattgaaataagtgattttcatatctatttcgtttttt-attttgtgattttgtcgtcttcgtgcgacgttggt 25855206  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    |||||||||||||||||||||| || | | | |||||  ||||||||||||||||||| ||||||| ||||||||| | ||||||| ||||||| |||||    
T  25855205 ttgttcgtcgtctttgtgcgacgttatatgtttttctattttctctcaggtatttgatcggttcaggttgtcagattagcttcgatccagtgcaaatcca 25855106  T
Q  368 atcaatgactttg 380  Q
    |||||||||||||    
T  25855105 atcaatgactttg 25855093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 271 - 447
Target Start/End: Original strand, 37399730 - 37399906
Alignment:
Q  271 ttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatc 370  Q
    ||||||||||||||||||| |||||| |||||||||||||| ||| ||||||||||| |||| |||||| ||| | ||||||| ||||||||||||||||    
T  37399730 ttcgtcgtctttgtgcgacgttgtttgtctttcttgtttctttcaagtatttgattgattcaaattgtccgattagcttcgatccagtgcagatccaatc 37399829  T
Q  371 aatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    |||||||||||||||||||||||| || |  | || ||||||||||||  ||||||||||| |||||||||||||||    
T  37399830 aatgactttgacgtcatccacgttacaaattcggagacatggttattcatgagatttaaatatagtcatatgtgtag 37399906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 238 - 447
Target Start/End: Original strand, 772542 - 772751
Alignment:
Q  238 gtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattg 337  Q
    ||||||||||||||||  |||||||||| |||||  ||||||||||||||| ||||||| |||||||||||||  ||||||||||| | |||||||||||    
T  772542 gtgatttcgtcgtcttagtgcgacgttgttttgtctgtcgtctttgtgcgatattgtttgtctttcttgtttcgttcaggtatttgttcggttcagattg 772641  T
Q  338 tcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtc 437  Q
    |||||||| |||| ||  ||||||||||||||||||||||||| |||| || || ||| ||| ||||| |||||  |||| |||||| | |||  |||||    
T  772642 tcagatcagcttcaatctagtgcagatccaatcaatgactttggcgtcgtcaacattgaagatccagagacatgagtatttcggagaatgaaaaatagtc 772741  T
Q  438 atatgtgtag 447  Q
    ||||||||||    
T  772742 atatgtgtag 772751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 168 - 447
Target Start/End: Original strand, 44681491 - 44681768
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    |||||||||||||  | ||||||||| |||||||||||||||||||||||||||||||       |||||||| |||||||||||   || |||||||||    
T  44681491 tctaactcgtttttctttttcccttttattgaaataagtgattttcacatctatttcgttttg--attttgtggtttcgtcgtctcagtgtgacgttggt 44681588  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    ||||||||||| |||||| ||| |||||| |||||||||||||  | || |||||  |  ||||||||||||| | || ||||||| | ||| |||||||    
T  44681589 ttgttcgtcgtttttgtgggacgttgtttgtctttcttgtttcgtttagatatttattatgttcagattgtcaaaccagcttcgatccggtgtagatcca 44681688  T
Q  368 atcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||||||||||||||| | ||||| ||||||||  | || |||||| |||||| |||| |||||  ||||||||| |||||    
T  44681689 atcaatgactttgacataatccaggttgcagattcggagacatgggtattccagagacttaaaaatagtcatatatgtag 44681768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 183 - 447
Target Start/End: Complemental strand, 5025124 - 5024862
Alignment:
Q  183 tatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtcttt 282  Q
    ||||||||||| ||||||||| ||||||| ||| |||||||||        ||||||||||||||||||||  |||||| ||| ||||||||||||||||    
T  5025124 tatttcccttttattgaaata-gtgatttacacgtctatttcgtttcttt-ttttgtgatttcgtcgtcttagtgcgaccttgttttgttcgtcgtcttt 5025027  T
Q  283 gtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgac 382  Q
    ||||||| ||||||| ||||||| ||||  | ||||||||| | |||||||||||||||||||  |||||| |||| |||||| ||||||||||||||      
T  5025026 gtgcgacgttgttttcctttcttatttcatttaggtatttgttcggttcagattgtcagatcagattcgatccagtccagatcaaatcaatgactttgga 5024927  T
Q  383 gtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||| || | |||||||| || || |||| | ||||| ||||| |||||| |||||| ||||||||    
T  5024926 gtcgtcaatgttgcagatccggagacataggtattctggagacttaaatatagtcaaatgtgtag 5024862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 183 - 399
Target Start/End: Original strand, 9933892 - 9934103
Alignment:
Q  183 tatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtcttt 282  Q
    ||||||||||| ||| |||||||||||||| ||||||||||||        ||||||||||||| ||||||  |||||||||| ||||||||||||||||    
T  9933892 tatttcccttttattaaaataagtgatttttacatctatttcgttttttc-ttttgtgatttcgccgtcttagtgcgacgttgttttgttcgtcgtcttt 9933990  T
Q  283 gtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgac 382  Q
    |||||||   |||| |||||||||||||  ||||||||||| ||| ||||||||||||||||| ||| ||| ||||||||||| ||||||||||||||      
T  9933991 gtgcgac---gtttgtctttcttgtttcgttcaggtatttg-ttgattcagattgtcagatcagctttgatccagtgcagatcaaatcaatgactttgga 9934086  T
Q  383 gtcatccacgttgcaga 399  Q
    ||| || ||||||||||    
T  9934087 gtcgtcaacgttgcaga 9934103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 291 - 447
Target Start/End: Complemental strand, 19895646 - 19895490
Alignment:
Q  291 ttgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatcca 390  Q
    |||||| | |||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||| ||||||||||||||| |||||||||    
T  19895646 ttgtttgtttttcttgtttctctcaggtatttgatcggttcagattgtcatatcagcttcgatccagtgcagattcaatcaatgactttggcgtcatcca 19895547  T
Q  391 cgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||||| |||  | || ||||| |||||| |||||||||||| |||||||||| ||||    
T  19895546 cgttgtagattcggagacatgattattctggagatttaaatatagtcatatgggtag 19895490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 183 - 447
Target Start/End: Original strand, 43483645 - 43483896
Alignment:
Q  183 tatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtcttt 282  Q
    ||||||||||| |||||||||||||||||||||||||||||||        ||||||||||||| ||||||  |||||||||| ||||||||||||||||    
T  43483645 tatttcccttttattgaaataagtgattttcacatctatttcgtttttgc-ttttgtgatttcgccgtcttagtgcgacgttgttttgttcgtcgtcttt 43483743  T
Q  283 gtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgac 382  Q
    ||||||| |||||| ||||||||||            |||| | |||||||||||||| |||| | ||||| ||||||| ||| |||||||||||||       
T  43483744 gtgcgacgttgtttgtctttcttgt------------tttgttcggttcagattgtcaaatcagcatcgatccagtgcatatcaaatcaatgacttttga 43483831  T
Q  383 gtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    |||||| |||||||||| || || |||  | |||||||||||  ||||| |||||||||||||||    
T  43483832 gtcatcaacgttgcagatccggagacaaaggtattccggagacataaatatagtcatatgtgtag 43483896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 168 - 345
Target Start/End: Complemental strand, 13008757 - 13008581
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    ||||||| |||||  | |||| |||| ||||||||||||||||||||||||||||| |       |||||||||||| ||||||||  ||||||||||||    
T  13008757 tctaactagtttttctctttctcttttattgaaataagtgattttcacatctattttgtttttt-attttgtgattttgtcgtcttagtgcgacgttggt 13008659  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatca 345  Q
    |||||||||||||||||||| | |||||| |||||||| ||||  ||||||||||| | |||||||||||||| ||||    
T  13008658 ttgttcgtcgtctttgtgcggcgttgtttgtctttcttatttcgttcaggtatttgttcggttcagattgtcatatca 13008581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 195 - 399
Target Start/End: Complemental strand, 23177639 - 23177437
Alignment:
Q  195 attgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgt 294  Q
    |||||||||||||||||||||||||||||||       |||||||||||||  ||||||  |||||| ||||||| ||||||||||||||||| | ||||    
T  23177639 attgaaataagtgattttcacatctatttcgttttc--attttgtgatttctccgtcttagtgcgaccttggttttttcgtcgtctttgtgcggcgttgt 23177542  T
Q  295 ttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgtt 394  Q
     | ||||||||||||   ||||||||||| |||||||| |||| || |||| |||||||   ||  | ||| ||||||| |||||| |||||||||||||    
T  23177541 ctgtctttcttgttttgttcaggtatttgtttggttcaaattgccaaatcagcttcgatatggtataaatcaaatcaatcactttggcgtcatccacgtt 23177442  T
Q  395 gcaga 399  Q
    |||||    
T  23177441 gcaga 23177437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 234 - 447
Target Start/End: Complemental strand, 29804694 - 29804485
Alignment:
Q  234 ttttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttcttt-cttgtttctctcaggtatttgattggttca 332  Q
    |||||||||||||||||| |  ||||||| || |||||| |||||||||||||||| |||||||| ||| ||||||     ||||| |||| | | ||||    
T  29804694 ttttgtgatttcgtcgtcatagtgcgacgctgttttgtttgtcgtctttgtgcgacgttgttttttttttcttgtt-----caggtgtttgttcgattca 29804600  T
Q  333 gattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatg 432  Q
    |||| |||||||| ||||||| |  ||||||||||| ||||||||||| | ||||| |||||||||| || ||  ||||| ||||||||| ||||||||     
T  29804599 gattatcagatcagcttcgatccgatgcagatccaaccaatgactttggcatcatcaacgttgcagatccggaggcatggctattccggatatttaaata 29804500  T
Q  433 tagtcatatgtgtag 447  Q
    ||||||||| |||||    
T  29804499 tagtcatatttgtag 29804485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 271 - 447
Target Start/End: Original strand, 39090220 - 39090396
Alignment:
Q  271 ttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatc 370  Q
    |||||| |||||||||||| |||||| |||||||||||||  ||||||||||| | |||||||||||||| |||| ||||||| ||||||| ||| | ||    
T  39090220 ttcgtcatctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcggttcagattgtcatatcagcttcgatccagtgcaaatcaattc 39090319  T
Q  371 aatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||||||||||  |||||| | ||||||||  |||| |||||  |||| | | || |||||| |||||||||||||||    
T  39090320 aatgactttggagtcatcaatgttgcagattcagagacatgagtattacagtgacttaaatatagtcatatgtgtag 39090396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 183 - 446
Target Start/End: Complemental strand, 38649426 - 38649165
Alignment:
Q  183 tatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtcttt 282  Q
    ||||| ||||| ||||||||||||||||| |||||||||||||        ||||||||| ||||||||||  || ||| ||| |||||| |||||||||    
T  38649426 tattttccttttattgaaataagtgatttacacatctatttcgtttcttt-ttttgtgatctcgtcgtcttagtgagaccttgttttgtttgtcgtcttt 38649328  T
Q  283 gtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgac 382  Q
    ||||||| ||||||  ||||||| ||||  ||| ||||||| || | ||||||||| |||||| ||||||| || |||| ||| ||||||||||||||      
T  38649327 gtgcgacgttgtttgcctttcttttttcgttcaagtatttg-ttcgatcagattgttagatcagcttcgatcca-tgcatatcaaatcaatgactttgga 38649230  T
Q  383 gtcatccacgttgcagacccag-atacatggttattccggagatttaaatgtagtcatatgtgta 446  Q
    ||| || || ||| ||| |  | | |||||| ||||||||||| |||||| ||||||||||||||    
T  38649229 gtcgtcaacattgtagatctggaagacatgggtattccggagacttaaatatagtcatatgtgta 38649165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 185 - 379
Target Start/End: Original strand, 46918448 - 46918639
Alignment:
Q  185 tttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgt 284  Q
    |||||||||| ||||||||| |||||||||||||||||| |       |||||||||||||||| ||||  ||| || |||||||||| |||||||||||    
T  46918448 tttcccttta-ttgaaataaatgattttcacatctattttgtttttt-attttgtgatttcgtcatctttgtgcaacattggtttgtttgtcgtctttgt 46918545  T
Q  285 gcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgacttt 379  Q
    |||   |||||| || ||||||||||  ||||| ||||| | ||||||||||||||||||| ||| ||| || |||| || ||||||||||||||    
T  46918546 gcggtgttgtttgtcattcttgtttcgttcagg-atttgttcggttcagattgtcagatcagcttagatccaatgcaaattcaatcaatgacttt 46918639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 233 - 379
Target Start/End: Original strand, 14707677 - 14707823
Alignment:
Q  233 attttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttca 332  Q
    |||||||||||||||| ||||  || | |||||||||||| ||||| |||||||| | |||||| |||||||||||||  | ||||||||| | | ||||    
T  14707677 attttgtgatttcgtcatcttagtgtggcgttggtttgttagtcgtttttgtgcggcgttgtttgtctttcttgtttcatttaggtatttgttcgattca 14707776  T
Q  333 gattgtcagatcaacttcgattcagtgcagatccaatcaatgacttt 379  Q
     |||||| ||||| ||||||| || |||||||||||| |||||||||    
T  14707777 aattgtctgatcatcttcgatccaatgcagatccaattaatgacttt 14707823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 256 - 373
Target Start/End: Complemental strand, 24045278 - 24045160
Alignment:
Q  256 tgcgacgttg-gtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgatt 354  Q
    |||||||||| |||||||||||||||||||| | |||||||| | ||||||||||  |||| ||||||||| | ||||||||||||||||||||| |||     
T  24045278 tgcgacgttgtgtttgttcgtcgtctttgtgtggcattgtttgtatttcttgttttgctcatgtatttgatcgattcagattgtcagatcaacttagatc 24045179  T
Q  355 cagtgcagatccaatcaat 373  Q
     ||||||||| ||||||||    
T  24045178 tagtgcagattcaatcaat 24045160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 330 - 447
Target Start/End: Original strand, 2532132 - 2532249
Alignment:
Q  330 tcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaa 429  Q
    |||||||||||||||| ||||||| |||||||||||||| ||||||||||| ||||||| |||||||||| || ||  ||||| ||||||||||| || |    
T  2532132 tcagattgtcagatcatcttcgatccagtgcagatccaaccaatgactttggcgtcatcaacgttgcagatccggaggcatggctattccggagaattta 2532231  T
Q  430 atgtagtcatatgtgtag 447  Q
    || |||| |||| |||||    
T  2532232 atatagttatatttgtag 2532249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 168 - 380
Target Start/End: Complemental strand, 10250565 - 10250356
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    ||||| |||||||  || |||| ||| |||||||||||||||||||||||||||||||        ||| ||||||||| ||||    || ||||||| |    
T  10250565 tctaattcgtttttctaattcctttttattgaaataagtgattttcacatctatttcgttttttc-tttcgtgatttcgccgtcgg--tgtgacgttgtt 10250469  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    |||||||||||||||||| | | |||||| ||||| || ||||  ||||| ||||| |  ||||||||||||||| || |||||||  |||||||||| |    
T  10250468 ttgttcgtcgtctttgtgtggcgttgtttgtcttttttatttcgttcaggaatttgttccgttcagattgtcagaacagcttcgatcgagtgcagatcaa 10250369  T
Q  368 atcaatgactttg 380  Q
    |||||||||||||    
T  10250368 atcaatgactttg 10250356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 195 - 447
Target Start/End: Complemental strand, 33530525 - 33530281
Alignment:
Q  195 attgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgt 294  Q
    |||||||||||||||||| ||||||||||||        ||| ||||||| ||||||||  | ||||||||  |||||||||||||||||||||  ||      
T  33530525 attgaaataagtgatttttacatctatttcgttttctc-tttcgtgattttgtcgtcttagtacgacgttgtgttgttcgtcgtctttgtgcgaagtttg 33530427  T
Q  295 ttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgtt 394  Q
    |||| |||  ||||     || ||||||| | |||||||||||||| |||| ||| ||| ||||||| ||||||||||||| |||| ||||||| |||||    
T  33530426 ttttgttt--tgtt-----catgtatttgttcggttcagattgtcaaatcagcttagatccagtgcaaatccaatcaatgaatttggcgtcatcaacgtt 33530334  T
Q  395 gcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||||| || || |||||  |||| |||||| || ||| |||||||| ||||||    
T  33530333 gcagatcctgagacatgagtatttcggagacttgaatatagtcataagtgtag 33530281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 271 - 447
Target Start/End: Complemental strand, 41748509 - 41748333
Alignment:
Q  271 ttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatc 370  Q
    |||| |||||| ||||||| |||||| ||||||||||||   |  |||||||| | ||||||||| |||||||||||||||||  | |||||||| ||||    
T  41748509 ttcgccgtcttagtgcgacgttgtttgtctttcttgttttgtttgggtatttgttcggttcagatcgtcagatcaacttcgatcaaatgcagatcaaatc 41748410  T
Q  371 aatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||||||||||  |||||| || | ||||| |  || ||| || ||||||||||| |||||| |||| ||||||||||    
T  41748409 aatgactttggagtcatcaacatcgcagatctggagacaagggtattccggagacttaaatatagttatatgtgtag 41748333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 238 - 447
Target Start/End: Complemental strand, 21552470 - 21552261
Alignment:
Q  238 gtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttcttt-----cttgtttctctcaggtatttgattggttca 332  Q
    ||||||||||||||||  |||||||||| || ||| ||||||||| || ||| |||||| |||||     |||||||     | || |||||| ||||||    
T  21552470 gtgatttcgtcgtcttagtgcgacgttgtttcgtttgtcgtctttatgtgacgttgtttgtcttttccctcttgttt-----aagtgtttgatcggttca 21552376  T
Q  333 gattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatg 432  Q
    ||||||||||||  ||||||| || ||||||||||| ||||||||||| ||||||| |||||||||| ||  |  ||||  |||| ||||||||| |||     
T  21552375 gattgtcagatccgcttcgatccactgcagatccaaccaatgactttggcgtcatcaacgttgcagatccgaaggcatgactatttcggagattttaata 21552276  T
Q  433 tagtcatatgtgtag 447  Q
    ||||||||| |||||    
T  21552275 tagtcatatttgtag 21552261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 167 - 367
Target Start/End: Original strand, 22751468 - 22751666
Alignment:
Q  167 ttctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttgg 266  Q
    ||||||||||||||  ||||||||||| ||| |||||||||||||||| ||   |||||       ||||||| |||| |||||| |  ||| |||||||    
T  22751468 ttctaactcgttttactatttcccttttattaaaataagtgattttcatattagtttcgtttttt-attttgtaattttgtcgtcgtagtgc-acgttgg 22751565  T
Q  267 tttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcc 366  Q
    |||||||||||||||| |||| | ||||||  ||||||||||||  |||  |||||| |  |||||||||||||||||| ||||||| || |||||||||    
T  22751566 tttgttcgtcgtctttatgcggcgttgtttgcctttcttgtttcgttcaactatttgttcagttcagattgtcagatcagcttcgatccaatgcagatcc 22751665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 334 - 447
Target Start/End: Complemental strand, 45949598 - 45949485
Alignment:
Q  334 attgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgt 433  Q
    ||||||| |||| |||||||  ||||||||||||||||||||||||| |||| || |||||||||| || ||  ||||  |||||||||||||| ||| |    
T  45949598 attgtcatatcagcttcgatcaagtgcagatccaatcaatgactttggcgtcgtcaacgttgcagatccggaggcatgactattccggagattttaatat 45949499  T
Q  434 agtcatatgtgtag 447  Q
    |||||||| |||||    
T  45949498 agtcatatttgtag 45949485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 329 - 399
Target Start/End: Complemental strand, 21329222 - 21329152
Alignment:
Q  329 ttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcaga 399  Q
    |||||||||||||||||||||||||  ||||||||||||| ||||||||||| ||| ||| ||||||||||    
T  21329222 ttcagattgtcagatcaacttcgatctagtgcagatccaaccaatgactttggcgttatcaacgttgcaga 21329152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 234 - 396
Target Start/End: Original strand, 32312662 - 32312824
Alignment:
Q  234 ttttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcag 333  Q
    |||||||||||| |||||||  ||| |||||| |||||||||||||||||||| |  |||||  |||||||  | |   ||| || |||| ||| ||||     
T  32312662 ttttgtgatttcttcgtcttagtgcaacgttgttttgttcgtcgtctttgtgcaatgttgttagtctttctcatcttgttcatgtgtttgtttgattcat 32312761  T
Q  334 attgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgc 396  Q
    ||||||| |||| |||||||  |||||| ||||||||||||| ||| |||||||| |||||||    
T  32312762 attgtcatatcagcttcgatcaagtgcatatccaatcaatgattttaacgtcatcaacgttgc 32312824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 234 - 302
Target Start/End: Complemental strand, 14734068 - 14734000
Alignment:
Q  234 ttttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttcttt 302  Q
    ||||||||||||||||||||  |||||||||| |||||| |||||||||||||||| |||||| |||||    
T  14734068 ttttgtgatttcgtcgtcttagtgcgacgttgttttgtttgtcgtctttgtgcgacgttgtttgtcttt 14734000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 185 - 310
Target Start/End: Complemental strand, 15124047 - 15123923
Alignment:
Q  185 tttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgt 284  Q
    ||||||||| ||||||||||||||||||||||||||||| |       ||||||||||||| ||||| |  |   |||||||||||||| |||| |||||    
T  15124047 tttcccttttattgaaataagtgattttcacatctattttg-ttttttattttgtgatttcatcgtcatagtataacgttggtttgttcttcgtatttgt 15123949  T
Q  285 gcgacattgtttttctttcttgtttc 310  Q
    || || |||||| |||||||||||||    
T  15123948 gcaacgttgtttgtctttcttgtttc 15123923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 256 - 397
Target Start/End: Original strand, 34893228 - 34893367
Alignment:
Q  256 tgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattc 355  Q
    |||| ||||| |||||||||||||||||| | |  |||||| |||||||||||||    ||||||||| ||  ||||| ||||||||||| ||| ||| |    
T  34893228 tgcgtcgttgttttgttcgtcgtctttgtacaatcttgtttgtctttcttgtttcgt--aggtatttgtttcattcagtttgtcagatcagctttgatcc 34893325  T
Q  356 agtgcagatccaatcaatgactttgacgtcatccacgttgca 397  Q
    |||||||||| ||| ||||||||||  ||| || ||||||||    
T  34893326 agtgcagatcaaattaatgactttggagtcctcaacgttgca 34893367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 168 - 224
Target Start/End: Original strand, 39090145 - 39090202
Alignment:
Q  168 tctaactcgttttgt-tatttccctttaattgaaataagtgattttcacatctatttc 224  Q
    ||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||    
T  39090145 tctaactcgttttttctatttcccttttattgaaataagtgattttcacatctatttc 39090202  T

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Target: chr7; HSP #48
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 238 - 402
Target Start/End: Complemental strand, 34594537 - 34594373
Alignment:
Q  238 gtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattg 337  Q
    |||| |||||||||||  ||||| |||| |||||| ||||||||||||||||||||||| |||||  | | |   ||| || |||| |  ||||| |||     
T  34594537 gtgacttcgtcgtcttagtgcgaagttgttttgtttgtcgtctttgtgcgacattgtttgtcttttctctcttgttcaagtgtttgttcagttcaaatta 34594438  T
Q  338 tcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcagaccc 402  Q
    ||| |||| |||| ||  ||||||||||||| |||||||||||  |||||| |||||| ||||||    
T  34594437 tcatatcagcttcaatctagtgcagatccaaccaatgactttggtgtcatcaacgttgtagaccc 34594373  T

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Target: chr7; HSP #49
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 168 - 269
Target Start/End: Original strand, 35661554 - 35661654
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    |||||||||||||    ||||||||| ||||||||||||||| |||||||||||||         |||||||||||||||||||||| ||||||||||||    
T  35661554 tctaactcgtttttccttttcccttttattgaaataagtgatcttcacatctatttt-attttttattttgtgatttcgtcgtcttcgtgcgacgttggt 35661652  T
Q  268 tt 269  Q
    ||    
T  35661653 tt 35661654  T

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Target: chr7; HSP #50
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 271 - 399
Target Start/End: Original strand, 36350300 - 36350428
Alignment:
Q  271 ttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatc 370  Q
    ||||||||||| ||| ||| |||||| ||||| ||||||   |||| |||||| | |  | ||||||||| |||| ||| |||||||||| |||||||||    
T  36350300 ttcgtcgtcttagtgtgacgttgtttgtcttttttgtttggttcagatatttgttcgacttagattgtcatatcagctttgattcagtgcggatccaatc 36350399  T
Q  371 aatgactttgacgtcatccacgttgcaga 399  Q
    |||| ||||| |||| || ||||||||||    
T  36350400 aatggctttggcgtcgtcaacgttgcaga 36350428  T

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Target: chr7; HSP #51
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 238 - 381
Target Start/End: Original strand, 43098676 - 43098819
Alignment:
Q  238 gtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattg 337  Q
    ||||||||||||||||  |||| ||||| ||||||| || ||||| ||||||||||||| |||||| ||| |   ||| |  |||| |||||| ||||||    
T  43098676 gtgatttcgtcgtcttagtgcggcgttgttttgttcttcatctttatgcgacattgtttgtctttcatgtcttgttcatgcgtttgtttggtttagattg 43098775  T
Q  338 tcagatcaacttcgattcagtgcagatccaatcaatgactttga 381  Q
    | |||||||||| |||  || | | || ||||||||||||||||    
T  43098776 tgagatcaactttgatctagggaaaattcaatcaatgactttga 43098819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 167 - 399
Target Start/End: Complemental strand, 35135268 - 35135038
Alignment:
Q  167 ttctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttgg 266  Q
    ||||| ||||||||  | ||||| ||| ||||||||| |||||||||||||||||||||       || |||||||||  |||  ||  || ||||||||    
T  35135268 ttctagctcgtttttatctttcctttttattgaaatacgtgattttcacatctatttcgtttttt-atattgtgattttatcggattagtgtgacgttgg 35135170  T
Q  267 tttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcc 366  Q
    ||||||| ||||||||||| | | |||| | |||||| | ||||  ||||| | ||  |  ||||| ||| |||||||  |||||||  |||||||||||    
T  35135169 tttgttc-tcgtctttgtgtggcgttgtctgtctttcctatttcattcaggaaattattcagttcaaattatcagatcggcttcgatcaagtgcagatcc 35135071  T
Q  367 aatcaatgactttgacgtcatccacgttgcaga 399  Q
    |||||||||||||   ||||||||| |||||||    
T  35135070 aatcaatgactttcgtgtcatccacattgcaga 35135038  T

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Target: chr7; HSP #53
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 356 - 447
Target Start/End: Original strand, 16273599 - 16273690
Alignment:
Q  356 agtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    |||||||||| ||||||||||| ||   || || |||||||||| || || |||||| ||||||||||| |||||| || ||||||||||||    
T  16273599 agtgcagatcaaatcaatgactctggactcgtcaacgttgcagatccggagacatggatattccggagacttaaatataatcatatgtgtag 16273690  T

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Target: chr7; HSP #54
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 168 - 223
Target Start/End: Original strand, 37399656 - 37399711
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctattt 223  Q
    |||||||||||||  | ||||||||| |||||||||| ||||||||||||||||||    
T  37399656 tctaactcgtttttctctttcccttttattgaaataaatgattttcacatctattt 37399711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 291 - 397
Target Start/End: Complemental strand, 37890451 - 37890345
Alignment:
Q  291 ttgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatcca 390  Q
    |||||| | |||||||||||  ||| ||||||| | | ||||||||||||||||| ||| ||| |  |||||||||| |||||||| ||  |||| ||||    
T  37890451 ttgtttgtttttcttgtttcgttcacgtatttgttcgtttcagattgtcagatcagctttgatccgctgcagatccagtcaatgacattagcgtcgtcca 37890352  T
Q  391 cgttgca 397  Q
    |||||||    
T  37890351 cgttgca 37890345  T

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Target: chr7; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 369 - 431
Target Start/End: Original strand, 40657840 - 40657902
Alignment:
Q  369 tcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaat 431  Q
    |||||||||||| ||| |||||||||||||| || || |||| ||||||||||||| ||||||    
T  40657840 tcaatgactttggcgttatccacgttgcagatccggagacatagttattccggagacttaaat 40657902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 189 - 319
Target Start/End: Complemental strand, 35141814 - 35141685
Alignment:
Q  189 cctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcga 288  Q
    ||||| ||||||||||||||||||||||||||||||        ||||||||||| |||||||||  ||||||||| |||| || ||  ||||| || |     
T  35141814 ccttttattgaaataagtgattttcacatctatttc-attttttattttgtgattccgtcgtcttagtgcgacgttagtttttttgtaatctttatgtgg 35141716  T
Q  289 cattgtttttctttcttgtttctctcaggta 319  Q
    | |||||| |||||| ||||||  |||||||    
T  35141715 cgttgtttgtctttcctgtttcgttcaggta 35141685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 239 - 295
Target Start/End: Complemental strand, 35363080 - 35363024
Alignment:
Q  239 tgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtt 295  Q
    ||||||||||||||| |||||||||||| |||||||| |||||| ||| || |||||    
T  35363080 tgatttcgtcgtcttattgcgacgttggattgttcgtagtctttatgcaacgttgtt 35363024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 356 - 424
Target Start/End: Original strand, 39707501 - 39707569
Alignment:
Q  356 agtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggaga 424  Q
    ||||||||||||||||||||||||||| ||||  |||||||| | || || |||||  |||||||||||    
T  39707501 agtgcagatccaatcaatgactttgacatcattaacgttgcatatccggagacatgagtattccggaga 39707569  T

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Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 356 - 447
Target Start/End: Complemental strand, 14733962 - 14733871
Alignment:
Q  356 agtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    |||||||||||||  |||||||||| ||||||| || ||||||| || ||  |||| |||||||| | |||| ||| ||||||||| |||||    
T  14733962 agtgcagatccaacaaatgactttggcgtcatcaacattgcagatccggaggcatgattattccgaaaattttaatatagtcatatttgtag 14733871  T

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Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 238 - 296
Target Start/End: Complemental strand, 1749282 - 1749225
Alignment:
Q  238 gtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgttt 296  Q
    ||||||||||||||||  ||||||||||  |||||||||||| ||||||| ||||||||    
T  1749282 gtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtc-ttgtgcggcattgttt 1749225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 356 - 455
Target Start/End: Complemental strand, 4621271 - 4621170
Alignment:
Q  356 agtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaa--atgtagtcatatgtgtagtcatat 453  Q
    ||||||||||| |||||||||||||  |||||| || ||||||| || || |||||  |||| |||||| ||||  || ||||||||| ||||| |||||    
T  4621271 agtgcagatccgatcaatgactttggtgtcatcaacattgcagatccggagacatgagtatttcggagacttaaatatatagtcatatttgtaggcatat 4621172  T
Q  454 gt 455  Q
    ||    
T  4621171 gt 4621170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 185 - 223
Target Start/End: Complemental strand, 19895718 - 19895680
Alignment:
Q  185 tttccctttaattgaaataagtgattttcacatctattt 223  Q
    ||||||||| ||||||||||||||||||| |||||||||    
T  19895718 tttcccttttattgaaataagtgattttcgcatctattt 19895680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 236 - 289
Target Start/End: Original strand, 16263484 - 16263537
Alignment:
Q  236 ttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgac 289  Q
    ||||||||||||||| ||  |||||| ||| ||||||||||||| |||||||||    
T  16263484 ttgtgatttcgtcgtgttagtgcgaccttgttttgttcgtcgtccttgtgcgac 16263537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 342 - 447
Target Start/End: Complemental strand, 35363018 - 35362913
Alignment:
Q  342 atcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatat 441  Q
    |||| ||| ||| ||||||| || |||||||||||||||| ||| || ||||||||||  |  | |||||| |||| |||||| || ||| || ||||||    
T  35363018 atcagctttgatccagtgcaaatacaatcaatgactttgatgtcgtcaacgttgcagattcgaagacatggatatttcggagacttgaatataatcatat 35362919  T
Q  442 gtgtag 447  Q
    ||||||    
T  35362918 gtgtag 35362913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 360 - 444
Target Start/End: Complemental strand, 22379602 - 22379518
Alignment:
Q  360 cagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtg 444  Q
    |||||||| |||||||||||||| || || |||||||||| ||  | |||||  |||||| |||| || ||| ||||||||||||    
T  22379602 cagatccagtcaatgactttgacatcttcaacgttgcagatccgaagacatgagtattccagagacttgaatatagtcatatgtg 22379518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 363 - 455
Target Start/End: Original strand, 38277068 - 38277160
Alignment:
Q  363 atccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtagtcatatgt 455  Q
    |||| ||||||||||||| |||| || ||||||||||  ||||  ||||| | ||||||||| || ||| ||||||||| ||| | |||||||    
T  38277068 atccgatcaatgactttggcgtcgtcaacgttgcagatacagagtcatgggtgttccggagacttgaatatagtcatatttgttgacatatgt 38277160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 177; Significance: 3e-95; HSPs: 62)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 185 - 447
Target Start/End: Original strand, 44295363 - 44295624
Alignment:
Q  185 tttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgt 284  Q
    ||||| ||| ||||||||||||||||||||||||||||| |       |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  44295363 tttcctttttattgaaataagtgattttcacatctattttgtttttt-attttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgt 44295461  T
Q  285 gcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgt 384  Q
    ||||| |||||| | ||||||||||||||||||||||||||  |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  44295462 gcgacgttgtttgtttttcttgtttctctcaggtatttgatcagttcagattgtcagatcagcttcgatccagtgcagatccaatcaatgactttgacgt 44295561  T
Q  385 catccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||||||||||||||| || |||||||||||||||||||||||||||| ||||||||| |||||    
T  44295562 catccacgttgcagatccggatacatggttattccggagatttaaatatagtcatatatgtag 44295624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 175; E-Value: 5e-94
Query Start/End: Original strand, 168 - 447
Target Start/End: Complemental strand, 8054892 - 8054614
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    |||||||||||||  ||||||||||  ||||||||||||||||||||||||| || ||       |||||||||||||||||||||| ||||||||||||    
T  8054892 tctaactcgtttttctatttcccttatattgaaataagtgattttcacatctgttacgtttttttattttgtgatttcgtcgtcttcgtgcgacgttggt 8054793  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| |||||||||||||    
T  8054792 ttgttcgtcgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagattgtcagatcagcttcgatccagtgcagatcca 8054693  T
Q  368 atcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||||||||||||| |||||||||| ||||||| || || |||||| ||||||| |||||||||| |||||||||||||||    
T  8054692 atcaatgactttggcgtcatccac-ttgcagatccggagacatggctattccgaagatttaaatatagtcatatgtgtag 8054614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 168 - 447
Target Start/End: Original strand, 41996575 - 41996851
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    |||||||||||||  ||||||||||| ||||||||||||||||||||||||| || ||       ||||||||||||| |||||||| ||||||||||||    
T  41996575 tctaactcgtttttgtatttcccttttattgaaataagtgattttcacatctgttacgtttttt-attttgtgatttcatcgtcttcgtgcgacgttggt 41996673  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    |||||||||||||||||||||| ||  || ||||||||| |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  41996674 ttgttcgtcgtctttgtgcgacgtt--ttgtctttcttgattctctcaggtatttgatcggttcagattgtcagatcagcttcgattcagtgcagatcca 41996771  T
Q  368 atcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||||||||||||| |||||||||||||||||| || || |||| | |||||||||||||||||| |||||||||||||||    
T  41996772 atcaatgactttggcgtcatccacgttgcagatccggagacatagctattccggagatttaaatatagtcatatgtgtag 41996851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 190 - 447
Target Start/End: Complemental strand, 37129733 - 37129481
Alignment:
Q  190 ctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgac 289  Q
    |||| |||||||||||||||||||||||||||||||       ||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||    
T  37129733 cttttattgaaataagtgattttcacatctatttcgtttt---attttgtgatttcgtcgtcttgt-gcgacgttggtt-gttcgtcgtctttgtgcgac 37129639  T
Q  290 attgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatcc 389  Q
    ||||||| | |||||||||||||||||||||||||  | ||||||||||||||||| |||||||  ||||||||||||||||||||||||| ||||||||    
T  37129638 attgtttgtttttcttgtttctctcaggtatttgaacgcttcagattgtcagatcagcttcgatcaagtgcagatccaatcaatgactttggcgtcatcc 37129539  T
Q  390 acgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    |||||||||| || || |||||||||||||| |||||||||| |||||||||||||||    
T  37129538 acgttgcagatccggaaacatggttattccgaagatttaaatatagtcatatgtgtag 37129481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 233 - 447
Target Start/End: Original strand, 5457165 - 5457379
Alignment:
Q  233 attttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttca 332  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||| ||||||| |||||| |||||||||||||||||| ||||||||| ||||||    
T  5457165 attttgtgatttcgtcgtcttcgtgcgacgttggttagttcgtcgtcttcgtgcgacgttgtttgtctttcttgtttctctcaagtatttgatcggttca 5457264  T
Q  333 gattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatg 432  Q
    ||||||||||||| |||||||  |||||||||||||||||| |||||| |||||||||||||||||| || || |||||| ||||||||||||||||||     
T  5457265 gattgtcagatcagcttcgatctagtgcagatccaatcaataactttgccgtcatccacgttgcagatccggagacatggctattccggagatttaaata 5457364  T
Q  433 tagtcatatgtgtag 447  Q
    |||||||||||||||    
T  5457365 tagtcatatgtgtag 5457379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 168 - 447
Target Start/End: Original strand, 9992695 - 9992974
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnatt-ttgtgatttcgtcgtcttcttgcgacgttgg 266  Q
    |||||||||||||  | ||||||||| ||||||||||||||||||||||||||||||          | ||||||||||||||||||| |||||||||||    
T  9992695 tctaactcgtttttctctttcccttttattgaaataagtgattttcacatctatttcattttgtatctcttgtgatttcgtcgtcttcgtgcgacgttgg 9992794  T
Q  267 tttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcc 366  Q
    ||||||||||||||||||| |||||||||| | |||||||||||||| || |||||||| |||||| |||||||||| | |||| || || |||||||||    
T  9992795 tttgttcgtcgtctttgtgtgacattgtttgtttttcttgtttctcttagatatttgatcggttcaaattgtcagataagcttcaatccaatgcagatcc 9992894  T
Q  367 aatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    |||||| ||||||| |||||||||||||||||| || || ||||||||||||||||||||||||| |||||||||||||||    
T  9992895 aatcaacgactttggcgtcatccacgttgcagatcc-gagacatggttattccggagatttaaatatagtcatatgtgtag 9992974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 168 - 447
Target Start/End: Original strand, 9270051 - 9270329
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    |||||||||||||  | ||||||||| |||||||||||||||||||||||||||||||       ||||||||||||||| |||||| ||||||||||||    
T  9270051 tctaactcgtttttctctttcccttttattgaaataagtgattttcacatctatttcgtttttt-attttgtgatttcgttgtcttcgtgcgacgttggt 9270149  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    |||||||||||||||||||||| |||||| | |||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||    
T  9270150 ttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcggttcagattgtcatatcagcttcgatccagtgcagatcca 9270249  T
Q  368 atcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||| ||| ||| | || |||| | | |||||| |  || |||||||||||| | |||||||||| |||||||||||||||    
T  9270250 atcgatggcttcggcggcatctatggtgcagatctggagacatggttattctgaagatttaaatatagtcatatgtgtag 9270329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 168 - 446
Target Start/End: Complemental strand, 32104922 - 32104644
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    ||||| |||||||  ||||||  ||| ||||||||||||||||||||||||| || ||       |||||||||||||||||||||| | ||||||||||    
T  32104922 tctaattcgtttttctatttcttttttattgaaataagtgattttcacatctgttacgtttttt-attttgtgatttcgtcgtcttcgtacgacgttggt 32104824  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    ||||| ||| ||||||||| || |||||| |||||||||||||||||||||||||||| |||||||||||||||||||  |||||| |||||||||| ||    
T  32104823 ttgtttgtcatctttgtgcaacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagattgtcagatcagtttcgatccagtgcagattca 32104724  T
Q  368 atcaatgactttga-cgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgta 446  Q
    |||||| ||||||| |||||||||||||||||| || || |||||| |||||||||||||||||| ||||||||||||||    
T  32104723 atcaataactttgaccgtcatccacgttgcagatccggagacatggctattccggagatttaaatatagtcatatgtgta 32104644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 185 - 447
Target Start/End: Original strand, 32412837 - 32413098
Alignment:
Q  185 tttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgt 284  Q
    ||||||||| ||||||||||||||||||||||| ||||| |       || ||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  32412837 tttcccttttattgaaataagtgattttcacatttattttgtttttt-atcttgtgatttcgtcgtcttcgtgcgacgttggtttgttcatcgtctttgt 32412935  T
Q  285 gcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgt 384  Q
    ||||  |||||| | |||||||||||| ||||||||||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||||| |||    
T  32412936 gcgatgttgtttgtttttcttgtttctttcaggtatttgattggttcagattgtcagatcagcttcgatcctgtgcagatccaatcaatgactttggcgt 32413035  T
Q  385 catccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    |||| |||||  ||| || |||||||| |||||||| ||||||| || |||||||| ||||||    
T  32413036 catctacgttatagatccggatacatgattattccgaagatttagatatagtcatacgtgtag 32413098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 168 - 447
Target Start/End: Complemental strand, 16996970 - 16996695
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    ||||||||||||| | |||| ||||| ||||||||||||||||| |||||||||||||       |||||||||||||||||||||| ||||||||||||    
T  16996970 tctaactcgttttct-attttccttttattgaaataagtgattt-cacatctatttcgtttttt-attttgtgatttcgtcgtcttcgtgcgacgttggt 16996874  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    | |||||||||||||||||||| |||||| | |||| ||||||||||||||||||||| | ||||||||||||| ||  ||||||| |||||||||||||    
T  16996873 t-gttcgtcgtctttgtgcgacgttgtttgtttttcctgtttctctcaggtatttgatcgcttcagattgtcagttcggcttcgatccagtgcagatcca 16996775  T
Q  368 atcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||||||||||||| |||||||||||||||| | |   | |||||||||||||||| |||||||| ||||||||| |||||    
T  16996774 atcaatgactttggcgtcatccacgttgcaaatctgaaaacatggttattccggatatttaaatatagtcatatatgtag 16996695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 233 - 447
Target Start/End: Complemental strand, 14115848 - 14115634
Alignment:
Q  233 attttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttca 332  Q
    |||||||||||||||| ||||| || ||||||||||||||||| |||||| ||||| ||||||| | |||||||||||||||||||||||||| ||||||    
T  14115848 attttgtgatttcgtcatcttcgtgtgacgttggtttgttcgttgtctttttgcgaaattgtttgtttttcttgtttctctcaggtatttgatcggttca 14115749  T
Q  333 gattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatg 432  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||| |||||||||||||||||| |   | |||| ||||||| || |||||||||     
T  14115748 gattgtcagatcagcttcgatccagtgcagatccaatcaatgactttggcgtcatccacgttgcagatctgaagacattgttattcaggcgatttaaata 14115649  T
Q  433 tagtcatatgtgtag 447  Q
    |||| ||||||||||    
T  14115648 tagttatatgtgtag 14115634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 168 - 446
Target Start/End: Complemental strand, 36545865 - 36545588
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    |||||||||||||  | ||||||||| |||||||||||||||||||||||||||||||       |||||||||||| ||||||||  ||||||||||||    
T  36545865 tctaactcgtttttctctttcccttttattgaaataagtgattttcacatctatttcgtttttt-attttgtgattttgtcgtctttgtgcgacgttggt 36545767  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    ||||| |||||||||||||||| || | | | |||||  ||||||||||||||||||| | ||||| ||||||||| | ||| ||| ||||||| | |||    
T  36545766 ttgttagtcgtctttgtgcgacgttctatgtttttctattttctctcaggtatttgatcgattcaggttgtcagattagctttgatccagtgcaaaccca 36545667  T
Q  368 atcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgta 446  Q
    ||||||||||||| |  ||||||||||||||| ||||| |||||||| |||||| ||||||||| ||||||||||||||    
T  36545666 atcaatgactttggctccatccacgttgcagatccagagacatggttgttccggtgatttaaatatagtcatatgtgta 36545588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 168 - 447
Target Start/End: Original strand, 31874114 - 31874388
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    |||||||||||||    ||||||||| ||||||||||||||||||||||||||||| |       |||||||||||| ||||||||  ||| ||||||||    
T  31874114 tctaactcgtttttccttttcccttttattgaaataagtgattttcacatctattttgtttttt-attttgtgattttgtcgtctttgtgcaacgttggt 31874212  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| |||||||||||||||| || ||||||| ||||||||||       
T  31874213 ttgttcgtcgtctttgtgcgacattgtttgtttttcttgtttctctcaggtatttgatcggttcagattgtcagaacatcttcgatccagtgcagat--t 31874310  T
Q  368 atcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
     || | |  |||| |||||||||||||||||| || || |||||||| |||||||||||||||| |||||||||||||||    
T  31874311 gtc-aggtatttgccgtcatccacgttgcagatcc-gagacatggtttttccggagatttaaatatagtcatatgtgtag 31874388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 168 - 447
Target Start/End: Complemental strand, 16937423 - 16937145
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    ||||||| |||||  ||||||||||| | | ||||||||||||| |||||||||||||        ||||||||||||||||||||  |||||| ||| |    
T  16937423 tctaacttgtttttctatttcccttttacttaaataagtgatttacacatctatttcgtttcttt-ttttgtgatttcgtcgtcttagtgcgaccttgtt 16937325  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    |||||| ||||||||||||||||||||||  ||||| ||||||  ||||||||||| || |||||||||||||||||| ||||||| ||||||| ||| |    
T  16937324 ttgttcatcgtctttgtgcgacattgtttgcctttcgtgtttcgttcaggtatttgtttagttcagattgtcagatcagcttcgatccagtgcatatcaa 16937225  T
Q  368 atcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    |||||||||||||  ||| || |||||||||| | ||| |||||| ||||||||||| |||||| |||||||||||||||    
T  16937224 atcaatgactttggagtcgtcaacgttgcagatctagagacatgggtattccggagacttaaatatagtcatatgtgtag 16937145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 168 - 445
Target Start/End: Complemental strand, 32256805 - 32256529
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    ||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||||        ||| ||||||||| ||||||  ||||| |||| |    
T  32256805 tctaacttgtttttttatttcccttttattgaaataagtgattttcacatctatttcgtttttgc-tttcgtgatttcgccgtcttagtgcgatgttgtt 32256707  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    ||||| |||||||||||||||| |||||| ||||||||||||   || |||||||| | |||| ||||||| | |||| |||||||   ||||||||| |    
T  32256706 ttgtttgtcgtctttgtgcgacgttgtttgtctttcttgttttgttcgggtatttgttcggtttagattgttaaatcagcttcgatcatgtgcagatcaa 32256607  T
Q  368 atcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgt 445  Q
    |||||||||||||  |||||| |||||||||| || || ||| || ||||||||||| |||||| |||||||||||||    
T  32256606 atcaatgactttggagtcatcaacgttgcagatccggagacaagggtattccggagacttaaatatagtcatatgtgt 32256529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 168 - 379
Target Start/End: Original strand, 5989660 - 5989870
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    |||||||||||||  | |||||||||   |||||||||||||||||||||||||||||       |||||||||||| ||||| ||  ||||||||||||    
T  5989660 tctaactcgtttttctctttccctttttatgaaataagtgattttcacatctatttcgtttttt-attttgtgattttgtcgttttagtgcgacgttggt 5989758  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
     ||||||||||||||||||| | |||||| |||||||| |||| |||| ||||||  | ||||||||||||||| |||||||||||||||||||||| ||    
T  5989759 atgttcgtcgtctttgtgcggcgttgtttgtctttcttatttcgctcaagtatttcttcggttcagattgtcaggtcaacttcgattcagtgcagattca 5989858  T
Q  368 atcaatgacttt 379  Q
    ||||||||||||    
T  5989859 atcaatgacttt 5989870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 183 - 399
Target Start/End: Original strand, 37659011 - 37659226
Alignment:
Q  183 tatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtcttt 282  Q
    ||||||||||| ||||||||||||||||| ||| |||||||||        |||||||||||||| |||||  |||||| ||| ||||||||||||||||    
T  37659011 tatttcccttttattgaaataagtgatttacacgtctatttcgtttcttt-ttttgtgatttcgttgtcttagtgcgaccttgttttgttcgtcgtcttt 37659109  T
Q  283 gtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgac 382  Q
    || |||| ||||||  ||||||||||||  ||| ||||||| | ||||||||||||||||||| ||||||| ||||||||||| |||||||||||||||     
T  37659110 gtacgacgttgtttgcctttcttgtttcgttcaagtatttgttcggttcagattgtcagatcagcttcgatccagtgcagatcaaatcaatgactttgaa 37659209  T
Q  383 gtcatccacgttgcaga 399  Q
    ||| || ||||||||||    
T  37659210 gtcgtcaacgttgcaga 37659226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 234 - 447
Target Start/End: Complemental strand, 12248733 - 12248517
Alignment:
Q  234 ttttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcag 333  Q
    ||||||||||||||||||||  |||||| ||| ||||||||||||||||||||||| |||||| |||||||||||||  ||||||||||| | | |||||    
T  12248733 ttttgtgatttcgtcgtcttagtgcgaccttgttttgttcgtcgtctttgtgcgacgttgtttgtctttcttgtttcattcaggtatttgttcgattcag 12248634  T
Q  334 attgtca---gatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaa 430  Q
    ||| |||   ||||||||||||  ||||||||||| ||||||||||||||  ||| || || |||||||  |||| |||||| |||||| |||| |||||    
T  12248633 attatcagatgatcaacttcgaaccagtgcagatcaaatcaatgactttggagtcgtcaactttgcagattcagagacatgggtattccagagacttaaa 12248534  T
Q  431 tgtagtcatatgtgtag 447  Q
    | |||||||||||||||    
T  12248533 tatagtcatatgtgtag 12248517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 168 - 441
Target Start/End: Complemental strand, 7281211 - 7280941
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    ||||||||| ||| |||||| | ||||||||||||||||||||||||||||||||| |       |||||||||||||| |||| |  |||||| |||||    
T  7281211 tctaactcgcttttttattttcttttaattgaaataagtgattttcacatctattttgtttttt-attttgtgatttcgccgtcatagtgcgacattggt 7281113  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    ||||||||||||||||||| ||||||||| ||||  |||||||   |||||||||| | |||| ||||||||| |||  ||||||  |||||||||| ||    
T  7281112 ttgttcgtcgtctttgtgcaacattgtttgtcttatttgtttcatgcaggtatttgttcggtttagattgtcatatccgcttcga-ccagtgcagattca 7281014  T
Q  368 atcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatat 441  Q
    ||| ||||||||| |||| ||||||||||||| | ||| |||||| ||||||||| | || ||| |||||||||    
T  7281013 atctatgactttg-cgtcgtccacgttgcagatctagagacatgggtattccggatacttgaatatagtcatat 7280941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 168 - 447
Target Start/End: Original strand, 2628944 - 2629218
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    ||||||||||||| | |||||||||| |||||||||||||||||||||||||| || |        ||| ||||||||||||| ||  |||||||||  |    
T  2628944 tctaactcgttttct-atttcccttttattgaaataagtgattttcacatctactttgtttttc--tttcgtgatttcgtcgttttagtgcgacgttatt 2629040  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    |||| |||| ||||||||||||||||||| |||||||||||||  ||||| ||||| |||| |||||||||||||||| ||||||| ||||||||||| |    
T  2629041 ttgtccgtcatctttgtgcgacattgtttgtctttcttgtttcgttcaggcatttgtttgg-tcagattgtcagatcagcttcgatccagtgcagatcaa 2629139  T
Q  368 atcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    |||||||||||||  ||| || |  ||| |||  | || |||||  ||||||||||| |||||| |||||||||||||||    
T  2629140 atcaatgactttggagtcctcaatattgtaga-tcggagacatgtgtattccggagacttaaatatagtcatatgtgtag 2629218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 186 - 447
Target Start/End: Original strand, 10042820 - 10043080
Alignment:
Q  186 ttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtg 285  Q
    |||||||| ||||||||||||||||||||| |||||||||        |||  |||||||||||||||  ||| |||||| ||||||||| ||||| |||    
T  10042820 ttcccttttattgaaataagtgattttcacttctatttcgttttttc-tttcatgatttcgtcgtcttagtgcaacgttgttttgttcgttgtcttagtg 10042918  T
Q  286 cgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtc 385  Q
    |||| || ||| |||||||||||||  ||||||||||| |  ||||| |||||||||||| |||||||  |||||||||| ||||||| ||||||  |||    
T  10042919 cgacgttatttgtctttcttgtttcgttcaggtatttgttcagttcaaattgtcagatcagcttcgatctagtgcagatcaaatcaataactttggagtc 10043018  T
Q  386 atccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
     || |||||||||| || || |||||  ||||||||||| |||||| |||| ||||||||||    
T  10043019 gtcaacgttgcagatccggagacatgtgtattccggagacttaaatatagttatatgtgtag 10043080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 280 - 446
Target Start/End: Original strand, 5328095 - 5328256
Alignment:
Q  280 tttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgacttt 379  Q
    |||||||||| |||||| | ||||||||  |||||| ||||||||| ||||||||||||||||||| ||| |||  ||||||||||||||||||||||||    
T  5328095 tttgtgcgacgttgtttgtttttcttgt--ctctcaagtatttgatcggttcagattgtcagatcagctttgatctagtgcagatccaatcaatgacttt 5328192  T
Q  380 gacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgta 446  Q
    | ||   ||||||||||||| || |||||||||||||||||||||||||||| |||| |||||||||    
T  5328193 ggcg---tccacgttgcagatccggatacatggttattccggagatttaaatatagttatatgtgta 5328256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 182 - 447
Target Start/End: Complemental strand, 3925759 - 3925496
Alignment:
Q  182 ttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctt 281  Q
    |||||||||||| | | |||||||| |||| |||||||||||||        ||||||||||||||||||||  ||| || ||| ||| |||||||||||    
T  3925759 ttatttcccttttactaaaataagttatttacacatctatttcgtttctt--ttttgtgatttcgtcgtcttagtgcaaccttgtttttttcgtcgtctt 3925662  T
Q  282 tgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttga 381  Q
    |||||||| ||||||  ||||||||||||  ||||||||||| | | ||||||| ||||||||| |||||||  |||||||||| ||||||||||||||     
T  3925661 tgtgcgaccttgtttgcctttcttgtttcattcaggtatttgttcgattcagatagtcagatcagcttcgatcaagtgcagatcaaatcaatgactttgg 3925562  T
Q  382 cgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
     ||| || ||||||||||    || |||||  ||||||||||| |||||| || ||||||||||||    
T  3925561 agtcgtcaacgttgcagatttggagacatgagtattccggagacttaaatataatcatatgtgtag 3925496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 167 - 422
Target Start/End: Complemental strand, 7269549 - 7269297
Alignment:
Q  167 ttctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttgg 266  Q
    |||||||||| ||| || ||||| |||||||| |||||||||||||||||||||||| |       |||||||||||| |||||| |  |||||||||||    
T  7269549 ttctaactcgcttttttctttccttttaattgtaataagtgattttcacatctattttgtttttt-attttgtgattttgtcgtcatagtgcgacgttgg 7269451  T
Q  267 tttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcc 366  Q
    |||||| ||||||||||||| ||||||||| |||||||||||||   || ||||||| | |||| ||||||||| |||  |||||| | ||||||||| |    
T  7269450 tttgttagtcgtctttgtgcaacattgtttgtctttcttgtttcatgcaagtatttgttcggtttagattgtcatatctgcttcgact-agtgcagattc 7269352  T
Q  367 aatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccgga 422  Q
    | || ||||||||| |||| |||| |||||||| || || |||||| |||||||||    
T  7269351 attctatgactttg-cgtcgtccatgttgcagatccggagacatgggtattccgga 7269297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 234 - 446
Target Start/End: Original strand, 32061889 - 32062101
Alignment:
Q  234 ttttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcag 333  Q
    ||||||||||||||||||||  ||||||| || |||||| ||||||||||||||||||||||| |||||    | |   |||||| |||| | |||||||    
T  32061889 ttttgtgatttcgtcgtcttagtgcgacgctgttttgtttgtcgtctttgtgcgacattgtttgtcttttccctcttgttcaggtgtttgttcggttcag 32061988  T
Q  334 attgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgt 433  Q
    |||||||||||| |||||||  ||||||||||||| ||||||||||| ||||||| |||||||||| || ||  ||||| ||||||  |||||| ||| |    
T  32061989 attgtcagatcagcttcgatcaagtgcagatccaaccaatgactttggcgtcatcaacgttgcagatccggaggcatggctattccaaagattttaatat 32062088  T
Q  434 agtcatatgtgta 446  Q
    |||||||| ||||    
T  32062089 agtcatatttgta 32062101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 246 - 447
Target Start/End: Complemental strand, 31713083 - 31712882
Alignment:
Q  246 gtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatca 345  Q
    ||||||||  ||||| |||| ||||||||||||||||||||||| |||||| ||||||||| |||  | ||||||||| | |||||||||||||| ||||    
T  31713083 gtcgtctttgtgcgatgttgttttgttcgtcgtctttgtgcgacgttgtttgtctttcttgcttcgtttaggtatttgttcggttcagattgtcatatca 31712984  T
Q  346 acttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgt 445  Q
     ||||||| ||||||||||| ||||||||||||||   ||||| | ||||||||    || ||||   |||||||| || |||||| |||||||||||||    
T  31712983 gcttcgatccagtgcagatcaaatcaatgactttggactcatcaatgttgcagatatggagacatcagtattccggtgacttaaatatagtcatatgtgt 31712884  T
Q  446 ag 447  Q
    ||    
T  31712883 ag 31712882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 185 - 447
Target Start/End: Complemental strand, 5917808 - 5917555
Alignment:
Q  185 tttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgt 284  Q
    ||||||||||||| |||||  ||||||||||||||||||||        ||| ||||||||||||||||  ||||||||||  |||||||||||||||||    
T  5917808 tttccctttaattaaaatat-tgattttcacatctatttcgttttttc-tttcgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtctttgt 5917711  T
Q  285 gcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgt 384  Q
    ||||| |||||| |||||| | |||   ||||||||||| | |||||||||||||||||       ||| |||||||||||||||||||||||||| |||    
T  5917710 gcgacgttgtttgtctttcctattttgttcaggtatttgttcggttcagattgtcagat-------gatccagtgcagatccaatcaatgactttggcgt 5917618  T
Q  385 catccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    | ||  | ||||||||||  | |||||| ||||  ||||| || ||| || ||||||||||||    
T  5917617 cgtcagcattgcagacccgaagacatgggtattttggagacttgaatatattcatatgtgtag 5917555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 168 - 379
Target Start/End: Original strand, 26937555 - 26937765
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    |||||||||||||  | ||||||||| |||||||||||| ||| |||||||||||| |         ||  |||||| ||||||||  |||| |||||||    
T  26937555 tctaactcgttttcctttttcccttttattgaaataagtaattctcacatctatttagtttctttgatta-tgattttgtcgtcttagtgcgtcgttggt 26937653  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    |||||||||| ||||||||| | |||||| |||||||||||||  ||||||||||  | ||||||||||||||||||| ||| |||  |||||| |||||    
T  26937654 ttgttcgtcgactttgtgcggcgttgtttgtctttcttgtttcgttcaggtatttattcggttcagattgtcagatcagctttgatctagtgcaaatcca 26937753  T
Q  368 atcaatgacttt 379  Q
    ||||||||||||    
T  26937754 atcaatgacttt 26937765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 168 - 437
Target Start/End: Original strand, 15665569 - 15665837
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    ||||||| |||||  | |||| |||| |||||||||||| ||||||||||||||||||        |||  |||||||||||||||  || || ||||      
T  15665569 tctaacttgtttttctctttcacttttattgaaataagtaattttcacatctatttcgttttttc-tttcatgatttcgtcgtcttagtgagatgttgtg 15665667  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    ||||| |||||||||||||  | |||||| ||| || |||||   ||||||||||| | ||||||||||||||| ||| ||| ||| |||||||||||||    
T  15665668 ttgtttgtcgtctttgtgcagcgttgtttgtctatcctgttttgttcaggtatttgttcggttcagattgtcaggtcagcttagatccagtgcagatcca 15665767  T
Q  368 atcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtc 437  Q
    |||||||||||||  ||||||  ||||||||| || || |||||| |||| |||||| || ||| |||||    
T  15665768 atcaatgactttggtgtcatcagcgttgcagatccggagacatgggtatttcggagacttgaatatagtc 15665837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 238 - 447
Target Start/End: Complemental strand, 12244231 - 12244022
Alignment:
Q  238 gtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattg 337  Q
    ||||||||||| ||||  |||||||||| ||||||||||  ||||||||| | |||||| || || |||||||  ||||||||||| | | |||||||||    
T  12244231 gtgatttcgtcatcttagtgcgacgttgttttgttcgtcaactttgtgcggcgttgtttgtcgtttttgtttcgttcaggtatttgttcgattcagattg 12244132  T
Q  338 tcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtc 437  Q
    ||| |||| ||| ||| || |||||||||||||||||||||||| ||| || | |||||||  || || | |||| |||||| |||| || ||| ||||     
T  12244131 tcatatcagctttgatccaatgcagatccaatcaatgactttgatgtcgtcaatgttgcagttccggagatatgggtattccagagacttgaatatagtt 12244032  T
Q  438 atatgtgtag 447  Q
    ||||||||||    
T  12244031 atatgtgtag 12244022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 170 - 380
Target Start/End: Original strand, 13864391 - 13864600
Alignment:
Q  170 taactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggttt 269  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||||||||||||         || ||||||  |||| |||  |||||||||| |||    
T  13864391 taactcgtttttttatttcccttttattgaaataagtgattttcacatctatttcgttttttc-gttcgtgattctgtcgccttagtgcgacgttgtttt 13864489  T
Q  270 gttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaat 369  Q
    |||| |  ||||| |||| | |||||| ||||||||||||    |||||||||  |  |||||||||||||||||| ||||||| ||||||| || ||||    
T  13864490 gttctttatctttctgcggcgttgtttgtctttcttgttttatgcaggtatttcttcagttcagattgtcagatcagcttcgatacagtgcatattcaat 13864589  T
Q  370 caatgactttg 380  Q
    | |||||||||    
T  13864590 ccatgactttg 13864600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 291 - 444
Target Start/End: Original strand, 13977560 - 13977713
Alignment:
Q  291 ttgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatcca 390  Q
    |||||| |||||||||||||  ||||||||||||  |||||||||| |||||||||||||||||||||||| || ||||||| ||||||||| || || |    
T  13977560 ttgtttgtctttcttgtttcgttcaggtatttgaccggttcagattatcagatcaacttcgattcagtgcaaattcaatcaacgactttgacatcgtcaa 13977659  T
Q  391 cgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtg 444  Q
    ||||||||| || || | |||  ||||| ||||| || ||| || |||||||||    
T  13977660 cgttgcagatccggagatatgagtattctggagacttgaatataatcatatgtg 13977713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 233 - 397
Target Start/End: Original strand, 17019212 - 17019376
Alignment:
Q  233 attttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttc-tctcaggtatttgattggttc 331  Q
    |||||||||||| ||||||||  |||||||||||||||||||||||||||||||    |||||| ||||||||||||| ||| | ||||||| | || ||    
T  17019212 attttgtgatttggtcgtcttagtgcgacgttggtttgttcgtcgtctttgtgcattgttgtttgtctttcttgtttcatct-aagtatttgttcggatc 17019310  T
Q  332 agattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgca 397  Q
    ||||| |||||| ||||| ||| || |||||||||||||||||| |||| | || |||| ||||||    
T  17019311 agattttcagattaactttgatccaatgcagatccaatcaatgattttggcatcgtccatgttgca 17019376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 233 - 397
Target Start/End: Original strand, 17549649 - 17549813
Alignment:
Q  233 attttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttc-tctcaggtatttgattggttc 331  Q
    |||||||||||| ||||||||  |||||||||||||||||||||||||||||||    |||||| ||||||||||||| ||| | ||||||| | || ||    
T  17549649 attttgtgatttggtcgtcttagtgcgacgttggtttgttcgtcgtctttgtgcattgttgtttgtctttcttgtttcatct-aagtatttgttcggatc 17549747  T
Q  332 agattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgca 397  Q
    ||||| |||||| ||||| ||| || |||||||||||||||||| |||| | || |||| ||||||    
T  17549748 agattttcagattaactttgatccaatgcagatccaatcaatgattttggcatcgtccatgttgca 17549813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 170 - 447
Target Start/End: Original strand, 23766772 - 23767047
Alignment:
Q  170 taactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggttt 269  Q
    |||||||||||  ||||| | ||| ||| ||||||||||||||||||| |||||||        ||| ||||||||||| ||||  |||||  ||  |||    
T  23766772 taactcgtttttctattttcattttattaaaataagtgattttcacatttatttcgtttttc--tttcgtgatttcgtcatcttaatgcgaaattatttt 23766869  T
Q  270 gttcgtcgtctttgtgcgacattgtttttctttctt-gtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaa 368  Q
    |||||||||||||||||||| |||||| | ||| || | |||  ||| ||||||| | | ||||||||||||||||| ||||||| ||||| ||||  ||    
T  23766870 gttcgtcgtctttgtgcgacgttgtttgtatttttttggttcattcatgtatttgttcgattcagattgtcagatcagcttcgatccagtgtagattaaa 23766969  T
Q  369 tcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||||||||||||  ||| || |||||||||| || || |||||| || |||||||   ||||| |||||||||||||||    
T  23766970 tcaatgactttggagtcgtcaacgttgcagatccggaaacatgggta-tccggaggcataaatatagtcatatgtgtag 23767047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 292 - 447
Target Start/End: Original strand, 37719993 - 37720148
Alignment:
Q  292 tgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccac 391  Q
    ||||| |||||||||||||  || |||||||| | |||| ||| | ||||| |||||||||| ||||||||||| |||||| ||||||| | ||||| ||    
T  37719993 tgtttgtctttcttgtttcgttcgggtatttgttcggtttagaatatcagaccaacttcgatccagtgcagatctaatcaaagactttggcttcatcaac 37720092  T
Q  392 gttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    |||||||| ||||| |||| | ||||||| ||| || ||| |||||||||||||||    
T  37720093 gttgcagatccagagacataggtattccgtagacttgaatatagtcatatgtgtag 37720148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 168 - 395
Target Start/End: Original strand, 3680953 - 3681168
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    ||||||| |||||  | ||| ||||| |||||||||| ||||||||||||||||||||       |||||||||||| ||||| ||  |||||| ||| |    
T  3680953 tctaacttgtttttctcttttccttttattgaaataaatgattttcacatctatttcgtttttt-attttgtgattttgtcgttttagtgcgacattgat 3681051  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    || |||||||||||  |||||| |||||| |||||||||||||| || |||||||| | |||| ||||||||| ||||           |||||||| ||    
T  3681052 ttattcgtcgtcttcatgcgacgttgtttgtctttcttgtttctttctggtatttgttcggtttagattgtcatatca-----------gtgcagattca 3681140  T
Q  368 atcaatgactttgacgtcatccacgttg 395  Q
    |||||||||||||||||| | |||||||    
T  3681141 atcaatgactttgacgtcgttcacgttg 3681168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 189 - 447
Target Start/End: Original strand, 16808928 - 16809171
Alignment:
Q  189 cctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcga 288  Q
    ||||| |||||||||||||||| ||||||||||||||       |||||||||||| |||||||   || |||||||| |||||||| |||||||||||     
T  16808928 ccttttattgaaataagtgattatcacatctatttcgtttttt-attttgtgattt-gtcgtctaagtgggacgttgggttgttcgtggtctttgtgcgg 16809025  T
Q  289 cattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatc 388  Q
    | |||||| ||||||||||||            || | |||||| |||||||| ||  ||| || || |||||||  |||||||||||||||||||  ||    
T  16809026 cgttgtttgtctttcttgttt------------tgttcggttcaaattgtcag-tcggctttgaatcggtgcagactcaatcaatgactttgacgttgtc 16809112  T
Q  389 cacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||||||||||| ||||| |||||  ||||||||||| || ||| |||||||||||||||    
T  16809113 cacgttgcagatccagaaacatgagtattccggagacttgaatatagtcatatgtgtag 16809171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 234 - 365
Target Start/End: Original strand, 14327574 - 14327705
Alignment:
Q  234 ttttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcag 333  Q
    ||||||||||| ||||||||  |||||||||| |||||| |||||||||||||||| |||||| |||||    |||   ||| || |||| | |||||||    
T  14327574 ttttgtgatttagtcgtcttagtgcgacgttgttttgtttgtcgtctttgtgcgacgttgtttgtcttttcccttttgttcaagtgtttgttcggttcag 14327673  T
Q  334 attgtcagatcaacttcgattcagtgcagatc 365  Q
    |||||||||||| ||||||| |||||||||||    
T  14327674 attgtcagatcagcttcgatacagtgcagatc 14327705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 234 - 436
Target Start/End: Complemental strand, 1215358 - 1215158
Alignment:
Q  234 ttttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcag 333  Q
    ||||||||||||||||||||  || ||||||| |||||| ||| |||||||||||| |||||| ||||| ||  || | ||||||  ||| | | |||||    
T  1215358 ttttgtgatttcgtcgtcttagtgtgacgttgttttgtttgtcatctttgtgcgacgttgtttatcttt-ttccttgt-tcaggtggttgttcgattcag 1215261  T
Q  334 attgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgt 433  Q
    ||||||| |||| ||| |||  ||||||||||||| ||||||||||| | ||||| |||||||||| || ||  || |  |||||| ||||||| |||||    
T  1215260 attgtcaaatcagctttgatctagtgcagatccaaccaatgactttggcctcatcaacgttgcagatcccgaggcaggactattccagagattttaatgt 1215161  T
Q  434 agt 436  Q
    |||    
T  1215160 agt 1215158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 256 - 448
Target Start/End: Complemental strand, 11298757 - 11298567
Alignment:
Q  256 tgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattc 355  Q
    |||||||||| |||||| |||||||||||||| | |||||| |||||    | |   |||||| |||| | || |||||||||||||| | ||| ||| |    
T  11298757 tgcgacgttgttttgtttgtcgtctttgtgcggcgttgtttgtcttttccctcttgttcaggtgtttgttcggatcagattgtcagattagctttgatcc 11298658  T
Q  356 agtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtagt 448  Q
    ||||||||||||| ||||||||||| ||||||  |||||||| | || || |||||||||||| | |||||| ||  ||||||||| ||||||    
T  11298657 agtgcagatccaaccaatgactttggcgtcataaacgttgcatatccggagacatggttattctgaagattttaa--tagtcatatttgtagt 11298567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 234 - 388
Target Start/End: Complemental strand, 18190863 - 18190711
Alignment:
Q  234 ttttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttcttt---cttgtttctctcaggtatttgattggtt 330  Q
    ||||||||||||||||||||  ||||||  || |||||| || ||||||||||||| |||||| |||||   ||||||     ||  | |||| ||| ||    
T  18190863 ttttgtgatttcgtcgtcttagtgcgaccctgttttgtttgttgtctttgtgcgacgttgtttgtcttttcccttgtt-----caaatgtttgtttgatt 18190769  T
Q  331 cagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatc 388  Q
    |||||||||| |||| ||||||| |||||||||||||| ||||||||||| |||||||    
T  18190768 cagattgtcaaatcagcttcgatccagtgcagatccaaccaatgactttggcgtcatc 18190711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 297 - 399
Target Start/End: Complemental strand, 31147787 - 31147682
Alignment:
Q  297 ttctttcttgtttctctcaggtatttgattggttcagattgtca---gatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgt 393  Q
    |||||| |||||||  ||||||||||| | ||||||| ||||||   |||||||||  || || |||||||||||||||||||||||||||| |||||||    
T  31147787 ttcttttttgtttcattcaggtatttgttcggttcagtttgtcatgtgatcaactttaatccaatgcagatccaatcaatgactttgacgtcgtccacgt 31147688  T
Q  394 tgcaga 399  Q
    ||||||    
T  31147687 tgcaga 31147682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 330 - 447
Target Start/End: Complemental strand, 27534335 - 27534218
Alignment:
Q  330 tcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaa 429  Q
    |||||||||||||| | ||||||| |||||||||||||| ||||||||| | ||||||| |||||||| | || || || ||  ||||||| |||||| |    
T  27534335 tcagattgtcagattagcttcgatccagtgcagatccaaccaatgacttaggcgtcatcaacgttgcatatccggaaacgtgactattccgtagatttta 27534236  T
Q  430 atgtagtcatatgtgtag 447  Q
    || ||||||||| |||||    
T  27534235 atatagtcatatttgtag 27534218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 233 - 307
Target Start/End: Original strand, 6833574 - 6833648
Alignment:
Q  233 attttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgt 307  Q
    |||||||||||| || |||||  ||||| ||||||||  ||||||||||||||||||||||||| ||||||||||    
T  6833574 attttgtgattttgttgtcttagtgcgatgttggtttactcgtcgtctttgtgcgacattgtttgtctttcttgt 6833648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 185 - 438
Target Start/End: Complemental strand, 16938338 - 16938092
Alignment:
Q  185 tttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgt 284  Q
    |||||||||  |||||||||||||||||||||||||||| |        |||  |||||||||||||||  |||||| ||| | |||||||||| |||||    
T  16938338 tttcccttttgttgaaataagtgattttcacatctattttgttttttc-tttcatgatttcgtcgtcttagtgcgactttgttgtgttcgtcgtatttgt 16938240  T
Q  285 gcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgt 384  Q
    ||  | |||||| ||||| || |||   || |||||||| | ||||||| ||| ||||||| |||      ||||||||| ||||||||||||||   ||    
T  16938239 gctgcgttgtttgtcttttttatttagttcgggtatttgttcggttcaggttgccagatcagctt------agtgcagattcaatcaatgacttttgtgt 16938146  T
Q  385 catccacgttgcagacccagatacatggttattccggagatttaaatgtagtca 438  Q
    | || |||||||||| || || | |||| ||||||| ||| |||||| ||||||    
T  16938145 cgtcaacgttgcagatccggagatatgggtattccgaagacttaaatatagtca 16938092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 356 - 449
Target Start/End: Complemental strand, 18197043 - 18196950
Alignment:
Q  356 agtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtagtc 449  Q
    ||||||||||||| |||||||||||||||| || |||||||||| || || |||| | ||||||  ||| || ||| ||||||||| |||||||    
T  18197043 agtgcagatccaaccaatgactttgacgtcgtcaacgttgcagatccggagacatcgctattccaaagactttaatatagtcatatttgtagtc 18196950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 338 - 399
Target Start/End: Original strand, 32920843 - 32920904
Alignment:
Q  338 tcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcaga 399  Q
    |||||| ||||||||| |||||  ||||||||||||||||||| ||||||| ||||||||||    
T  32920843 tcagattaacttcgatccagtgtggatccaatcaatgactttggcgtcatcaacgttgcaga 32920904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 233 - 411
Target Start/End: Complemental strand, 26582908 - 26582734
Alignment:
Q  233 attttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttca 332  Q
    ||||||||||||||| |||||  ||||| |||||||| ||||||| ||||||||    |||||| | |||||||||||  || | |||||| | | ||||    
T  26582908 attttgtgatttcgttgtcttagtgcgatgttggtttattcgtcgactttgtgcattgttgtttgt-tttcttgtttcgttcggatatttgttcgattca 26582810  T
Q  333 gattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatg 411  Q
    ||||||||||||| |||| ||    |||| ||| ||||||| |||||  | | |||||||||||||| || ||||||||    
T  26582809 gattgtcagatcagcttcaat---ctgcatatctaatcaattactttagcatgatccacgttgcagatccggatacatg 26582734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 186 - 268
Target Start/End: Complemental strand, 31147867 - 31147786
Alignment:
Q  186 ttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtt 268  Q
    |||||||| ||||| |||||||||||||||||||||||||       |||||||||||||||||||||  ||||| |||||||    
T  31147867 ttcccttttattgacataagtgattttcacatctatttcg-ctttttattttgtgatttcgtcgtcttagtgcgaggttggtt 31147786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 320 - 380
Target Start/End: Original strand, 36261137 - 36261197
Alignment:
Q  320 tttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttg 380  Q
    |||| |||||||| ||||||| ||||||||||||||| |||||||| ||||||||| ||||    
T  36261137 tttgtttggttcaaattgtcaaatcaacttcgattcaatgcagatctaatcaatgaatttg 36261197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 346 - 399
Target Start/End: Complemental strand, 283895 - 283842
Alignment:
Q  346 acttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcaga 399  Q
    ||||||||| |||||||||| |||||||||||||  |||| |||||||||||||    
T  283895 acttcgatttagtgcagatcaaatcaatgactttagcgtcgtccacgttgcaga 283842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 346 - 399
Target Start/End: Original strand, 631982 - 632035
Alignment:
Q  346 acttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcaga 399  Q
    ||||||||| |||||||||| |||||||||||||  |||| |||||||||||||    
T  631982 acttcgatttagtgcagatcaaatcaatgactttagcgtcgtccacgttgcaga 632035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 346 - 399
Target Start/End: Original strand, 817794 - 817847
Alignment:
Q  346 acttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcaga 399  Q
    ||||||||| |||||||||| |||||||||||||  |||| |||||||||||||    
T  817794 acttcgatttagtgcagatcaaatcaatgactttagcgtcgtccacgttgcaga 817847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 329 - 446
Target Start/End: Complemental strand, 14919313 - 14919197
Alignment:
Q  329 ttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagattta 428  Q
    ||||||||||||||||||||| ||| ||||||| || |||| |||||||||| | || || |||||| | |||| || |||| | ||||| |  |||||     
T  14919313 ttcagattgtcagatcaactttgatccagtgcaaattcaattaatgactttggcatcgtcaacgttgaaaacccggagacatag-tattctgatgatttg 14919215  T
Q  429 aatgtagtcatatgtgta 446  Q
    ||| ||||||||||||||    
T  14919214 aatatagtcatatgtgta 14919197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 361 - 441
Target Start/End: Complemental strand, 14530808 - 14530728
Alignment:
Q  361 agatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatat 441  Q
    |||||||| ||||||||||| || |||| |||||||||| || ||  ||||  |||||||||||||| ||| |||||||||    
T  14530808 agatccaaccaatgactttggcggcatcaacgttgcagatccggaggcatgactattccggagattttaatatagtcatat 14530728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 441
Target Start/End: Complemental strand, 14600590 - 14600519
Alignment:
Q  370 caatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatat 441  Q
    |||||||||||||||| || |||||||||| ||||| ||||   ||||||||||| || ||| |||||||||    
T  14600590 caatgactttgacgtcgtcaacgttgcagatccagagacataagtattccggagacttgaatatagtcatat 14600519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 238 - 296
Target Start/End: Complemental strand, 18890832 - 18890775
Alignment:
Q  238 gtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgttt 296  Q
    ||||||||||||||||  ||||||||||  |||||||||||| ||||||||| ||||||    
T  18890832 gtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtc-ttgtgcgacgttgttt 18890775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 234 - 296
Target Start/End: Original strand, 32920747 - 32920809
Alignment:
Q  234 ttttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgttt 296  Q
    ||||||||||||||||||||  ||| ||  || |||||| |||||||||||||||| ||||||    
T  32920747 ttttgtgatttcgtcgtcttagtgcaacaatgttttgtttgtcgtctttgtgcgaccttgttt 32920809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 168 - 217
Target Start/End: Complemental strand, 15237721 - 15237672
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacat 217  Q
    |||||||||||||  | ||||||||| |||||| ||||||||||||||||    
T  15237721 tctaactcgtttttctctttcccttttattgaagtaagtgattttcacat 15237672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 262 - 338
Target Start/End: Original strand, 3028176 - 3028252
Alignment:
Q  262 gttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgt 338  Q
    ||||||||||||||||||||| |||  |||||||| ||||| || |||   ||| ||||||| | ||||||||||||    
T  3028176 gttggtttgttcgtcgtctttatgctgcattgtttgtcttttttattttgttcatgtatttgttcggttcagattgt 3028252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 186 - 222
Target Start/End: Original strand, 7954525 - 7954561
Alignment:
Q  186 ttccctttaattgaaataagtgattttcacatctatt 222  Q
    |||||||| ||| ||||||||||||||||||||||||    
T  7954525 ttcccttttatttaaataagtgattttcacatctatt 7954561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 177; Significance: 3e-95; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 185 - 447
Target Start/End: Original strand, 43029730 - 43029991
Alignment:
Q  185 tttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgt 284  Q
    ||||||||| ||||||||||||||||||||||||||||| |       |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  43029730 tttcccttttattgaaataagtgattttcacatctattttgtttttt-attttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgt 43029828  T
Q  285 gcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgt 384  Q
    ||||| |||||| | ||||||||||||||||||||||||||  |||||||||||||||||| ||||||| ||||||||||||||||||||||||||  ||    
T  43029829 gcgacgttgtttgtttttcttgtttctctcaggtatttgatcagttcagattgtcagatcagcttcgatccagtgcagatccaatcaatgactttggagt 43029928  T
Q  385 catccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||||||||||||||| || |||||||||||||||||||||||||||| |||||||||||||||    
T  43029929 catccacgttgcagatccggatacatggttattccggagatttaaatatagtcatatgtgtag 43029991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 168 - 447
Target Start/End: Complemental strand, 1165480 - 1165202
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    ||||||| |||||  | ||||||||| ||||||||||||||||||||||||||||| |       |||||||||||||||||||||| ||||||||||||    
T  1165480 tctaacttgtttttctttttcccttttattgaaataagtgattttcacatctattttgtttttt-attttgtgatttcgtcgtcttcgtgcgacgttggt 1165382  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    ||||||||||||||||||| || |||||| | ||||||||||||||||||||||||||  ||||||||||| |||||| ||||||| |||||||||||||    
T  1165381 ttgttcgtcgtctttgtgcaacgttgtttgtttttcttgtttctctcaggtatttgatcagttcagattgttagatcagcttcgatccagtgcagatcca 1165282  T
Q  368 atcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||||||||||||| |||||||||||||||||| || ||||||||||||||| |||||||||||| |||||||||||||||    
T  1165281 atcaatgactttggcgtcatccacgttgcagatccggatacatggttattctggagatttaaatatagtcatatgtgtag 1165202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 172 - 447
Target Start/End: Complemental strand, 28995386 - 28995115
Alignment:
Q  172 actcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgt 271  Q
    |||||||||  ||||||||||| |||||||||||||||||||||||||||||||       |||||||||||| ||||||||| ||||||||||||| ||    
T  28995386 actcgtttttctatttcccttttattgaaataagtgattttcacatctatttcgtttt---attttgtgattttgtcgtcttcgtgcgacgttggtt-gt 28995291  T
Q  272 tcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatca 371  Q
    |||||||||||||||||| |||||| | |||||||||||||| ||||||||||| | |||||||||||| |||| ||||||| |||||||||||||||||    
T  28995290 tcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcgcttcagattgtcatatcagcttcgatccagtgcagatccaatca 28995191  T
Q  372 atgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||||||||| |||||||||||||||||| || || ||||||||||||||||||||||||| |||||||||||||||    
T  28995190 atgactttggcgtcatccacgttgcagatccggaaacatggttattccggagatttaaatatagtcatatgtgtag 28995115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 168 - 447
Target Start/End: Complemental strand, 3088746 - 3088470
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    ||||| |||||||  ||||| ||||| ||||||||||||||||| |||||||||||||       |||||||||||||||||||||| ||||||||||||    
T  3088746 tctaattcgtttttctattttccttttattgaaataagtgattt-cacatctatttcgtttttt-attttgtgatttcgtcgtcttcgtgcgacgttggt 3088649  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    | |||||||||||||||||||| |||||| | ||||||||||||||||||||||| || | ||||||||||||||||| ||||||| |||||||||||||    
T  3088648 t-gttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttaatcgcttcagattgtcagatcatcttcgatccagtgcagatcca 3088550  T
Q  368 atcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||||||||||||| |||||||||||||||||| || || ||||||||||||||||||||||||| |||||||||||||||    
T  3088549 atcaatgactttggcgtcatccacgttgcagatccggaaacatggttattccggagatttaaatatagtcatatgtgtag 3088470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 168 - 447
Target Start/End: Complemental strand, 22286833 - 22286557
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    |||||||||||||  ||||| ||||| |||||||||||| |||| |||||||||||||       ||||||||||||||||||||||  |||||||||||    
T  22286833 tctaactcgtttttctattttccttttattgaaataagtaattt-cacatctatttcgtttttt-attttgtgatttcgtcgtcttcgcgcgacgttggt 22286736  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    | |||||||||||||||||||| |||||| | |||||||||||||||||| ||||||| | |||| |||||||||||| ||||||| |||||||||||||    
T  22286735 t-gttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggcatttgatcgcttcatattgtcagatcagcttcgatccagtgcagatcca 22286637  T
Q  368 atcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    |||||||||||||||||||||||||||||||| |  || ||||||||||||| ||||||||||| |||||||||||||||    
T  22286636 atcaatgactttgacgtcatccacgttgcagatctggaaacatggttattccagagatttaaatatagtcatatgtgtag 22286557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 168 - 447
Target Start/End: Complemental strand, 43839602 - 43839323
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    ||||||||| |||  | ||||||||| |||||||||||||||||||||||||||||||       |||||||||||||||| ||||| ||||| ||||||    
T  43839602 tctaactcgcttttctctttcccttttattgaaataagtgattttcacatctatttcgtttttt-attttgtgatttcgtcatcttcgtgcgatgttggt 43839504  T
Q  268 ttgttcgtcgtcttt-gtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcc 366  Q
    ||||||||||| ||| |||||||||||||| | ||||||||||||||||||||||| ||  ||| |||||||||||||||||||||||||||||||||||    
T  43839503 ttgttcgtcgtattttgtgcgacattgtttgtttttcttgtttctctcaggtatttaatcagtttagattgtcagatcaacttcgattcagtgcagatcc 43839404  T
Q  367 aatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||||||| ||| || |||||||||||||||||| ||  | || ||||||||||| |||||||||| || ||||||||||||    
T  43839403 aatcaataactctggcgtcatccacgttgcagatccgaagacgtggttattccgaagatttaaatataatcatatgtgtag 43839323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 168 - 447
Target Start/End: Complemental strand, 41882492 - 41882216
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    |||||||||||||  ||||||||||  ||||||||||||||||| ||||||||||| |       |||||||||||||||||||||| ||||||||||||    
T  41882492 tctaactcgtttttctatttcccttgtattgaaataagtgattt-cacatctattttgtttttt-attttgtgatttcgtcgtcttcgtgcgacgttggt 41882395  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    | |||||||||||||||||||| |||||| | |||||||||||||||||||||||||| | ||||||||||||||||| |||| || ||||||||||  |    
T  41882394 t-gttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcgcttcagattgtcagatcagcttcaatccagtgcagattta 41882296  T
Q  368 atcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||||||||||||| |||||||||||||||||| ||| | | || |||||| ||||||||||||| |||||||||||||||    
T  41882295 atcaatgactttggcgtcatccacgttgcagatccaaaaaaatagttatttcggagatttaaatatagtcatatgtgtag 41882216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 168 - 447
Target Start/End: Original strand, 21803560 - 21803839
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    |||||||||||||  | |||| |||| ||||||| |||||||||||||||||||||||       ||||||||||||||| |||||| |||||| |||||    
T  21803560 tctaactcgtttttctctttctcttttattgaaacaagtgattttcacatctatttcgtttttt-attttgtgatttcgtagtcttcgtgcgacattggt 21803658  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctt--tcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatc 365  Q
    |||||||||||||||||||||| || ||||| ||  | |||||||||| |||||||||||||||||| ||||| |||||| ||||||| | ||||| |||    
T  21803659 ttgttcgtcgtctttgtgcgacgtttttttttttgtttttgtttctcttaggtatttgattggttca-attgttagatcagcttcgatcccgtgcaaatc 21803757  T
Q  366 caatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    |||||||||||||||||||||||||||||||||| || || |||||||||||||||||||||||||  ||||||||||||||    
T  21803758 caatcaatgactttgacgtcatccacgttgcagatccggagacatggttattccggagatttaaatacagtcatatgtgtag 21803839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 202 - 446
Target Start/End: Original strand, 45664285 - 45664528
Alignment:
Q  202 taagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctt 301  Q
    ||||||||||||||||||||||||       ||||||||||||||| |||||| ||| ||||| |||| |||||| | |||||||||| |||||| ||||    
T  45664285 taagtgattttcacatctatttcgtttttt-attttgtgatttcgttgtcttcgtgctacgttcgttttttcgtcatatttgtgcgacgttgtttgtctt 45664383  T
Q  302 tcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcagacc 401  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||||||||||||||| |    
T  45664384 tcttgtttctctcaggtatttgatcggttcagattgtcagatcagcttcgatccagtgcagatccaatcaatgactttggcgtcatccacgttgcagatc 45664483  T
Q  402 cagatacatggttattccggagatttaaatgtagtcatatgtgta 446  Q
    | || | |||||||| |||||||||||||| ||||| ||||||||    
T  45664484 cggagatatggttatcccggagatttaaatatagtcgtatgtgta 45664528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 202 - 447
Target Start/End: Original strand, 54240150 - 54240394
Alignment:
Q  202 taagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctt 301  Q
    ||||||||||||||||||||||||       |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||  |||||| | ||    
T  54240150 taagtgattttcacatctatttcgtttttt-attttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgacgtctttgtgcgatgttgtttgtttt 54240248  T
Q  302 tcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcagacc 401  Q
    |||||||||| ||||||||||||| |||||||||||| |||||| ||||||||||||||| |||||||||||||||||| || |||||| |||||||| |    
T  54240249 tcttgtttctatcaggtatttgatcggttcagattgtgagatcagcttcgattcagtgcaaatccaatcaatgactttggcgacatccatgttgcagatc 54240348  T
Q  402 cagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    | || ||||| ||||| || |||||||||| |||||||||||||||    
T  54240349 cggagacatgattattacgaagatttaaatatagtcatatgtgtag 54240394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 168 - 447
Target Start/End: Complemental strand, 47914676 - 47914399
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    ||||||||||||| || ||||| ||| ||||||| |||||||||||||||||||||||       |||||||||||||||||||||| ||||||||||||    
T  47914676 tctaactcgtttt-ttctttccattttattgaaaaaagtgattttcacatctatttcgtttttt-attttgtgatttcgtcgtcttcgtgcgacgttggt 47914579  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgttt-ctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcc 366  Q
    | ||| ||||||||||| |||| |||||| | |||||||||| ||||||||||||||||| ||||||||||| | |||| ||||||||||||||||||||    
T  47914578 t-gtttgtcgtctttgtccgacgttgtttgtttttcttgttttctctcaggtatttgattagttcagattgttatatcagcttcgattcagtgcagatcc 47914480  T
Q  367 aatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    |||||||||||||| |||||||||||||||||| ||  | |||||||| || ||||||||||||  ||||||| |||||||    
T  47914479 aatcaatgactttggcgtcatccacgttgcagatccttaaacatggttgtttcggagatttaaacatagtcatgtgtgtag 47914399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 168 - 447
Target Start/End: Original strand, 50519820 - 50520091
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    |||||||||||||  ||||||||||| ||||||||||||||||| |||||||||||||       ||||| |||||||||||||       |||||||||    
T  50519820 tctaactcgtttttctatttcccttttattgaaataagtgattt-cacatctatttcgtttttt-attttttgatttcgtcgtcaa-----gacgttggt 50519912  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    | |||||||||||||||||||| |||||| | |||||||||||||||||||||||||| | ||||||||||||||||| ||||||| |||||||||| ||    
T  50519913 t-gttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcgcttcagattgtcagatcagcttcgatccagtgcagattca 50520011  T
Q  368 atcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    |||||||| |||| |||||||||||||||||| |  || ||||||||||||||||||||||||| |||||||||||||||    
T  50520012 atcaatgattttggcgtcatccacgttgcagatctggaaacatggttattccggagatttaaatatagtcatatgtgtag 50520091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 170 - 447
Target Start/End: Complemental strand, 33978005 - 33977731
Alignment:
Q  170 taactcgttttgt-tatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtt 268  Q
    ||||||||||| | ||||||||||| |||||||||||||||||| |||||||||| |       ||||||||||||| |||||||| |||||||||||||    
T  33978005 taactcgttttttctatttcccttttattgaaataagtgatttttacatctattttgtttt---attttgtgatttcatcgtcttcgtgcgacgttggtt 33977909  T
Q  269 tgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaa 368  Q
     |||||||||||||||||||| |||||| | | |||||||||||||||||||||||| | ||||| |||| ||||||  |||||||||||||||||||||    
T  33977908 -gttcgtcgtctttgtgcgacgttgtttgtttgtcttgtttctctcaggtatttgatcgcttcagtttgttagatcagtttcgattcagtgcagatccaa 33977810  T
Q  369 tcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||||||||||||  ||||||||||||||||| || || | |||||||||| ||| |||||||| |||| ||||||||||    
T  33977809 tcaatgactttggtgtcatccacgttgcagatccggaaatatggttattctggaaatttaaatatagttatatgtgtag 33977731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 168 - 447
Target Start/End: Complemental strand, 29182692 - 29182416
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    |||||||||||||  | ||||||||| |||||||||||||||||||| |||||||| |       |||||||||||||||||||||| || |||||||||    
T  29182692 tctaactcgtttttctctttcccttttattgaaataagtgattttcatatctattttgtttttt-attttgtgatttcgtcgtcttcgtgtgacgttggt 29182594  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    |||||||||||||||||||||| |||||| | |||||||||||||||| ||||||||| |||||||||||||  |||| ||| ||| |||||||||||||    
T  29182593 ttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaagtatttgatcggttcagattgtc--atcagctttgatccagtgcagatcca 29182496  T
Q  368 atcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||||||| ||||  ||||||||||| || ||| |  || ||||| |||||  |||||||||||| |||||||||||||||    
T  29182495 atcaatggctttagcgtcatccacgctgtagatctggagacatgattattttggagatttaaatatagtcatatgtgtag 29182416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 168 - 447
Target Start/End: Complemental strand, 20201142 - 20200864
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    |||||||||||||  | |||| |||| ||||||||||||||||||||||||||||| |       ||||| |||||||||||| ||| |||||| |||||    
T  20201142 tctaactcgtttttctctttcacttttattgaaataagtgattttcacatctattttgtttttt-attttatgatttcgtcgttttcgtgcgacattggt 20201044  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    ||||| ||| |||||||| ||  |||||| | ||||||||||||||||| |||||||| ||||||||||||||||||| |||| ||  ||||||||||||    
T  20201043 ttgtttgtcatctttgtgtgaggttgtttgtttttcttgtttctctcagttatttgatcggttcagattgtcagatcagcttcaatcaagtgcagatcca 20200944  T
Q  368 atcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||||||||||| | |||| ||||||||||| | || || ||||| ||||| ||||||||||||| |||||||||||||||    
T  20200943 atcaatgacttcggcgtcttccacgttgcaaatccggagacatgattatttcggagatttaaatatagtcatatgtgtag 20200864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 168 - 447
Target Start/End: Complemental strand, 20203324 - 20203046
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    |||||||||||||  | |||| |||| ||||||||||||||||||||||||||||| |       ||||| |||||||||||| ||| |||||| |||||    
T  20203324 tctaactcgtttttctctttcacttttattgaaataagtgattttcacatctattttgtttttt-attttatgatttcgtcgttttcgtgcgacattggt 20203226  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    ||||| ||| |||||||| ||  |||||| | ||||||||||||||||| |||||||| ||||||||||||||||||| |||| ||  ||||||||||||    
T  20203225 ttgtttgtcatctttgtgtgaggttgtttgtttttcttgtttctctcagttatttgatcggttcagattgtcagatcagcttcaatcaagtgcagatcca 20203126  T
Q  368 atcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||||||||||| | |||| ||||||||||| |  | || ||||| ||||| ||||||||||||| |||||||||||||||    
T  20203125 atcaatgacttcggcgtcttccacgttgcaaattcggagacatgattatttcggagatttaaatatagtcatatgtgtag 20203046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 168 - 446
Target Start/End: Complemental strand, 35501843 - 35501566
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    |||||||||||||  | ||||||||| | |||||||| ||||||||||||||||||||       |||||||||||| ||||||||| || |||||| ||    
T  35501843 tctaactcgtttttctctttcccttttactgaaataaatgattttcacatctatttcgtttttt-attttgtgattttgtcgtcttcatgtgacgttagt 35501745  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    |||||| ||||||||||||||| || | | | |||||  ||||||||||||||||||| ||||||| ||||||||| | ||||||| || |||| || ||    
T  35501744 ttgttcatcgtctttgtgcgacgttatatgtttttctattttctctcaggtatttgatcggttcaggttgtcagattagcttcgatccaatgcaaattca 35501645  T
Q  368 atcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgta 446  Q
    |||||||||||||||  ||||||||||||||| || || |||||||| ||| || ||||||||| ||||||||||||||    
T  35501644 atcaatgactttgactccatccacgttgcagatccggagacatggttgttctggtgatttaaatatagtcatatgtgta 35501566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 241 - 443
Target Start/End: Complemental strand, 7656527 - 7656330
Alignment:
Q  241 atttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtca 340  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| |||| ||||||| |    
T  7656527 atttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgatattgtttgtctttcttgtttctctcaggtatttgatcggtttagattgtta 7656428  T
Q  341 gatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcata 440  Q
    ||||| ||| ||     | ||||||||||||||||||||  |||||||||||||||| |  | || ||||||||||||||||||||||||| ||||||||    
T  7656427 gatcagctttga-----tacagatccaatcaatgactttagcgtcatccacgttgcaaattcggaaacatggttattccggagatttaaatatagtcata 7656333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 185 - 447
Target Start/End: Complemental strand, 32238062 - 32237802
Alignment:
Q  185 tttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgt 284  Q
    |||||||||| ||||||||||||||||||| |||||||||        |||||||||||| ||| ||||  ||||| |||||||||||||||||||||||    
T  32238062 tttcccttta-ttgaaataagtgattttcatatctatttc-attttttattttgtgattttgtcatctttgtgcgatgttggtttgttcgtcgtctttgt 32237965  T
Q  285 gcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgt 384  Q
    ||| | |||||| ||||||| |||||  ||||||||||| | ||||||||||||||||||| ||| ||| ||||||| || |||||||||||||||| ||    
T  32237964 gcggcgttgtttgtctttctagtttcgttcaggtatttgttcggttcagattgtcagatcagcttagatccagtgcacattcaatcaatgactttgatgt 32237865  T
Q  385 catccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
      ||||||||||||| ||  | |||||| |||| ||||||||| ||| |||||||||||||||    
T  32237864 tgtccacgttgcagatccgaagacatggatatttcggagatttgaatttagtcatatgtgtag 32237802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 274 - 447
Target Start/End: Original strand, 11846684 - 11846856
Alignment:
Q  274 gtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaat 373  Q
    |||||||||||||||| || |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||| |  |||| |||||||||||    
T  11846684 gtcgtctttgtgcgacgtt-tttttctttcttgtttctctcaggtatttgatcggttcagattgtcagatcagctttgatccgatgcatatccaatcaat 11846782  T
Q  374 gactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    || |||| |||||||||||||||||| || || |||||||||||| ||| |||||||| |||||||||||||||    
T  11846783 gattttggcgtcatccacgttgcagatccggagacatggttattctggatatttaaatatagtcatatgtgtag 11846856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 167 - 446
Target Start/End: Original strand, 20251681 - 20251964
Alignment:
Q  167 ttctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattt----tgtgatttcgtcgtcttcttgcgacg 262  Q
    ||||||||||||||  | ||||||||| |||||||||||||||||||| ||||||||          |||    |||||||| ||||||||| |||||||    
T  20251681 ttctaactcgtttttctctttccctttgattgaaataagtgattttcatatctattttcttttttattttgttttgtgattttgtcgtcttcgtgcgacg 20251780  T
Q  263 ttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcag 362  Q
    ||||||||||||||||||||||| ||| || | | | |||||  ||||||||||||||| ||| ||||||| ||||||||| | ||||||| |||||||     
T  20251781 ttggtttgttcgtcgtctttgtgtgacgttatatgtttttctattttctctcaggtattcgatcggttcaggttgtcagattagcttcgatccagtgcaa 20251880  T
Q  363 atccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgta 446  Q
    ||||||||||||||||||||  ||||||||||||||| || || |||||||| ||  || ||||||||| |||| |||||||||    
T  20251881 atccaatcaatgactttgactccatccacgttgcagatccggagacatggttgttttggtgatttaaatatagttatatgtgta 20251964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 183 - 447
Target Start/End: Complemental strand, 913385 - 913122
Alignment:
Q  183 tatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtcttt 282  Q
    |||||||||||  ||||||||||||||||||||||||||||||        ||| |||||||||  |||||  |||| | ||| ||||||||||||||||    
T  913385 tatttccctttttttgaaataagtgattttcacatctatttcgtttttgc-tttcgtgatttcgctgtcttagtgcggcattgttttgttcgtcgtcttt 913287  T
Q  283 gtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgac 382  Q
    ||||||| |||||| ||||||||||||   |  |||||||| | ||||||||||||||||||| ||||||| ||||||||||| ||||||||||||||      
T  913286 gtgcgacgttgtttgtctttcttgttttgtttgggtatttgttcggttcagattgtcagatcagcttcgatccagtgcagatcaaatcaatgactttgga 913187  T
Q  383 gtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    |||||| |||||||||| || || |||  | |||| |||||| |||||| |||||||||||||||    
T  913186 gtcatcaacgttgcagatccggagacaaaggtatttcggagacttaaatatagtcatatgtgtag 913122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 168 - 344
Target Start/End: Complemental strand, 14741409 - 14741234
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    |||||||||||||  | ||||||||| ||||||||||||||||||||||||||||||        |||||||||||||||||||||| ||||||||||||    
T  14741409 tctaactcgtttttctctttcccttttattgaaataagtgattttcacatctatttc-attttttattttgtgatttcgtcgtcttcgtgcgacgttggt 14741311  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgttt-ctctcaggtatttgattggttcagattgtcagatc 344  Q
    | |||||||||||||||||||| |||||| | |||||||||| ||||||||||||||||| |||||||||||||||||    
T  14741310 t-gttcgtcgtctttgtgcgacgttgtttgtttttcttgttttctctcaggtatttgattagttcagattgtcagatc 14741234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 189 - 447
Target Start/End: Original strand, 21585950 - 21586207
Alignment:
Q  189 cctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcga 288  Q
    ||||| ||||||||||||||||||||||||||||| |       |||||||||||||||| ||||  || ||||||| ||| |||||||||||| |  ||    
T  21585950 ccttttattgaaataagtgattttcacatctattttgtttttt-attttgtgatttcgtcatcttagtgtgacgttgatttattcgtcgtctttttttga 21586048  T
Q  289 cattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatc 388  Q
    | |||||| ||||| ||||||   ||||||| ||| | |||||||||||||||| || ||||||||||||||| ||||||||||||||||||||||| ||    
T  21586049 ctttgtttgtcttttttgttttgttcaggtacttgttcggttcagattgtcagaccagcttcgattcagtgcaaatccaatcaatgactttgacgtcgtc 21586148  T
Q  389 cacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||||||| ||| || || |||||  ||||||||||| || ||| |||| ||||||||||    
T  21586149 cacgttggagatccggagacatgtgtattccggagagttgaatatagtgatatgtgtag 21586207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 195 - 447
Target Start/End: Complemental strand, 32089987 - 32089737
Alignment:
Q  195 attgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgt 294  Q
    ||||||||||||||||||||||||||||||        |||||||||||||||||||||  |||||| ||  ||||| ||||||||||||| | ||||||    
T  32089987 attgaaataagtgattttcacatctatttc-attttttattttgtgatttcgtcgtcttagtgcgacattactttgtccgtcgtctttgtggggcattgt 32089889  T
Q  295 ttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgtt 394  Q
    || |||||||||||||  ||| ||||||| |||||| ||||||||| |||| ||||||| ||||||||||||||||||||| ||||||||| || |||||    
T  32089888 ttgtctttcttgtttcgttcatgtatttgtttggtttagattgtcatatcagcttcgatccagtgcagatccaatcaatgattttgacgtcgtcaacgtt 32089789  T
Q  395 gcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    | | | || || |||| | ||||||||||| || ||| |||||| ||||||||    
T  32089788 gaatatcc-gagacataggtattccggagacttgaatatagtcacatgtgtag 32089737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 183 - 447
Target Start/End: Original strand, 40797078 - 40797341
Alignment:
Q  183 tatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtcttt 282  Q
    ||||||||||| |||||||||| ||||||||||||||||||||        |||  |||||||| ||||||  || ||| ||| ||||||||||||||||    
T  40797078 tatttcccttttattgaaataaatgattttcacatctatttcgtttttgc-tttcatgatttcgccgtcttagtgagacattgttttgttcgtcgtcttt 40797176  T
Q  283 gtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgac 382  Q
    ||||||| |||||| ||||||||||||   || |||||||| | | ||||||||||||||||| |||||||  |||||||||| ||||||||||||||      
T  40797177 gtgcgacgttgtttgtctttcttgttttgttcgggtatttgttcgattcagattgtcagatcagcttcgatctagtgcagatcaaatcaatgactttgga 40797276  T
Q  383 gtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    |||||| || ||| ||| || || ||| || ||||||||||| |||||| |||||||||||||||    
T  40797277 gtcatcaacattgtagatccggagacaagggtattccggagacttaaatatagtcatatgtgtag 40797341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 238 - 447
Target Start/End: Original strand, 22844151 - 22844360
Alignment:
Q  238 gtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattg 337  Q
    |||||||| |||||||  |||||| ||| ||||||||||||||||||||||| |||||| ||||||||||||   ||||||||||| | |||||||||||    
T  22844151 gtgatttcatcgtcttagtgcgacattgttttgttcgtcgtctttgtgcgacgttgtttgtctttcttgttttgttcaggtatttgttcggttcagattg 22844250  T
Q  338 tcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtc 437  Q
    ||||||||||||||||  |||||||||| ||||||||||||||  ||  || || ||||||| ||  | |||||| |||||||||||  ||||| |||||    
T  22844251 tcagatcaacttcgatcaagtgcagatcaaatcaatgactttggagttgtcaacattgcagatccgaagacatgggtattccggagacctaaatatagtc 22844350  T
Q  438 atatgtgtag 447  Q
    ||||| ||||    
T  22844351 atatgcgtag 22844360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 305 - 445
Target Start/End: Original strand, 33076451 - 33076591
Alignment:
Q  305 tgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcagacccag 404  Q
    ||||||| ||||||||||||| |||||||||||| |||| | ||| ||| ||||||||||||||||||||||||||||||||||||||||||||| || |    
T  33076451 tgtttctttcaggtatttgatcggttcagattgttagattagctttgatccagtgcagatccaatcaatgactttgacgtcatccacgttgcagatccgg 33076550  T
Q  405 atacatggttattccggagatttaaatgtagtcatatgtgt 445  Q
    |  |||||||||||||||||||| ||| |||||||||||||    
T  33076551 aggcatggttattccggagatttgaatatagtcatatgtgt 33076591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 168 - 380
Target Start/End: Complemental strand, 29776772 - 29776563
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    |||||||||||||  | |||||||||| | |||||||||| |||||||||||||||||       |||||||||||| ||| ||||  ||||||||| ||    
T  29776772 tctaactcgtttttctctttccctttact-gaaataagtggttttcacatctatttcgttttt--attttgtgattttgtcatctttgtgcgacgtttgt 29776676  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    ||||||||||||||||| || | |||||| |||||||||||||  ||||||||||| | ||||  ||||||||||||| ||| ||||||||||| |||||    
T  29776675 ttgttcgtcgtctttgtacggcgttgtttgtctttcttgtttcgttcaggtatttgttcggttttgattgtcagatcagcttagattcagtgcaaatcca 29776576  T
Q  368 atcaatgactttg 380  Q
    |||||| ||||||    
T  29776575 atcaataactttg 29776563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 185 - 447
Target Start/End: Original strand, 53426845 - 53427106
Alignment:
Q  185 tttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgt 284  Q
    |||| |||| ||||||||||||||||||||||||||||||         ||||||||||||||||||||  |||||||||   ||||||||| |||||||    
T  53426845 tttctctttcattgaaataagtgattttcacatctatttcattttttc-ttttgtgatttcgtcgtcttagtgcgacgttttgttgttcgtcatctttgt 53426943  T
Q  285 gcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgt 384  Q
    | | | |||||| ||||||||||||   ||||||||||| | |||| |||||||||||| | ||| |||  ||||||||||||||||||||||||| |||    
T  53426944 gtgcctttgtttgtctttcttgttttgttcaggtatttgttcggtttagattgtcagataagcttagatatagtgcagatccaatcaatgactttggcgt 53427043  T
Q  385 catccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    | || |||||||||| ||  | || ||  ||||||| ||| || ||| |||||||||||||||    
T  53427044 cgtcaacgttgcagatccgaagacttgagtattccgaagacttgaatatagtcatatgtgtag 53427106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 185 - 441
Target Start/End: Complemental strand, 22893783 - 22893526
Alignment:
Q  185 tttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgt 284  Q
    ||||||||| |||  ||||||||||||||||| ||||||||       |||||||||||||||| ||||  ||||||||||||||||||||| |||||||    
T  22893783 tttcccttttattagaataagtgattttcacacctatttcgtttttttattttgtgatttcgtcttcttagtgcgacgttggtttgttcgtcatctttgt 22893684  T
Q  285 gcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgt 384  Q
     || | |||||| |||||||||||||  |||| ||||||  ||||||| ||||||| || |  || ||| ||||||||||| |||||||||||||| |||    
T  22893683 acggcgttgtttgtctttcttgtttcgttcagatatttgtatggttcatattgtcatatgagttttgatccagtgcagatctaatcaatgactttggcgt 22893584  T
Q  385 catccacgttgcagacccagatacatggttattccg-gagatttaaatgtagtcatat 441  Q
      | |||||||||   ||  |||||||| ||||||| |||| |||||| |||||||||    
T  22893583 tgttcacgttgcaagtccgaatacatgggtattccgagagacttaaatatagtcatat 22893526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 167 - 399
Target Start/End: Complemental strand, 36540756 - 36540528
Alignment:
Q  167 ttctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttgg 266  Q
    |||||||||||||| | |||||||||| ||||||||||||||||||||||| ||||| |        ||| ||||||||||||||||  ||||||||||     
T  36540756 ttctaactcgttttct-atttcccttttattgaaataagtgattttcacatttattttgtttttc--tttcgtgatttcgtcgtcttagtgcgacgttgt 36540660  T
Q  267 tttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcc 366  Q
    |||| |||||||||| ||| ||  |||||| |||||||||||||  ||| |||||||   |||||||||||||||||||||||||||||||| |||||      
T  36540659 tttgatcgtcgtctt-gtgggatgttgtttgtctttcttgtttcattcaagtatttgtccggttcagattgtcagatcaacttcgattcagtacagatta 36540561  T
Q  367 aatcaatgactttgacgtcatccacgttgcaga 399  Q
    ||||||||||| ||  ||| || ||||||||||    
T  36540560 aatcaatgactctggagtcctcaacgttgcaga 36540528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 238 - 399
Target Start/End: Original strand, 4019694 - 4019858
Alignment:
Q  238 gtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgttttt---ctttcttgtttctctcaggtatttgattggttcaga 334  Q
    ||||||||||||||||  ||||||||||  |||||||||||||||||||| | ||||||||   |||| ||||||   ||||||||||| | ||||||||    
T  4019694 gtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtctttgtgcggcgttgttttttgtctttattgttttgttcaggtatttgttcggttcaga 4019793  T
Q  335 ttgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcaga 399  Q
    ||||||||||| ||| ||| |||||||||||||||||||||||||| |||| || ||||||||||    
T  4019794 ttgtcagatcagcttagatccagtgcagatccaatcaatgactttggcgtcgtcaacgttgcaga 4019858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 195 - 447
Target Start/End: Original strand, 39340256 - 39340507
Alignment:
Q  195 attgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgt 294  Q
    |||||||||||||||||||||||||||| ||        ||| |||||||   ||||||  |||||| ||| |||| |||||||||||||||| | ||||    
T  39340256 attgaaataagtgattttcacatctattccgttttttc-tttcgtgattttaccgtcttagtgcgactttgttttgctcgtcgtctttgtgcggcgttgt 39340354  T
Q  295 ttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgtt 394  Q
    || |||||||||||||  | | ||||||| | |||| ||||||||| |||||||| |||  ||||| ||| ||||||||||||||| |||| || |||||    
T  39340355 ttgtctttcttgtttcgttaatgtatttgttcggtttagattgtcatatcaacttagatctagtgctgattcaatcaatgactttgtcgtcgtcaacgtt 39340454  T
Q  395 gcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||||| || || |||||  ||||||||||| || ||| |||||||||||||||    
T  39340455 gcagatccggagacatgtgtattccggagacttgaatatagtcatatgtgtag 39340507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 168 - 447
Target Start/End: Original strand, 34767009 - 34767294
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnatttt-----gtgatttcgtcgtcttcttgcgacg 262  Q
    |||||||||||||  | ||||||||| ||||||||||||||||||||||| |||||||       |||||     ||||| ||||||||||  ||||| |    
T  34767009 tctaactcgtttttctctttcccttttattgaaataagtgattttcacatttatttcgttattttattttattttgtgatctcgtcgtctttgtgcgatg 34767108  T
Q  263 ttggtttgttcg-tcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgca 361  Q
    |||||||  ||  ||||||||||| ||  |||||| |||||||||||||  ||| ||||||| |  ||||| ||||||||| ||||||||||  ||||||    
T  34767109 ttggttttgtctatcgtctttgtgtgatgttgtttgtctttcttgtttcgttcaagtatttgttcagttcaaattgtcagaacaacttcgatcaagtgca 34767208  T
Q  362 gatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    |||| ||| ||||| ||||  ||| ||||| ||||| | || || |||||| ||||||||||| || ||| ||||| |||||||||    
T  34767209 gatctaattaatgattttggtgtcgtccacattgcatatccggagacatgggtattccggagacttgaatatagtcttatgtgtag 34767294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 238 - 380
Target Start/End: Complemental strand, 25939494 - 25939352
Alignment:
Q  238 gtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattg 337  Q
    |||||||||| ||||   |||||||||| |||||| |||||||||||||| | |||||| ||||| |||||||  |||| |||||| |  ||||||||||    
T  25939494 gtgatttcgttgtctcagtgcgacgttgttttgttagtcgtctttgtgcggcgttgtttgtctttgttgtttcgttcagatatttgttatgttcagattg 25939395  T
Q  338 tcagatcaacttcgattcagtgcagatccaatcaatgactttg 380  Q
    | |||||| ||| ||||||||||||||||||||||||||||||    
T  25939394 ttagatcagcttagattcagtgcagatccaatcaatgactttg 25939352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 168 - 399
Target Start/End: Complemental strand, 25374154 - 25373936
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    |||||||||||||  | ||| |||||  |||||||||||||||||||||||||||||        |||||||||||||  ||||||  |||||| |||||    
T  25374154 tctaactcgtttttctcttttccttttcttgaaataagtgattttcacatctatttc-attttttattttgtgatttctccgtcttagtgcgactttggt 25374056  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    |||||  |||||| |||||||| ||||||||||||||||||||  |||             ||||||| ||||||||||||||||| ||||||| ||| |    
T  25374055 ttgtttatcgtctatgtgcgacgttgtttttctttcttgtttcgttcac------------ttcagatcgtcagatcaacttcgatccagtgcatatcta 25373968  T
Q  368 atcaatgactttgacgtcatccacgttgcaga 399  Q
    |||||||||||||||||| | |||||||||||    
T  25373967 atcaatgactttgacgtcgttcacgttgcaga 25373936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 168 - 343
Target Start/End: Complemental strand, 40462079 - 40461905
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    ||||||| |||||  | ||||||||| ||||||||| | | |||| ||||||||||||       |||||||||||| ||||||||  ||||| |||| |    
T  40462079 tctaacttgtttttctctttcccttttattgaaatacgcggtttttacatctatttcggttttt-attttgtgattttgtcgtcttagtgcgatgttgat 40461981  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagat 343  Q
    |||||||||||||||||||| | |||||| |||||||||||||   ||  ||||||||||||||||||||||||||    
T  40461980 ttgttcgtcgtctttgtgcggcgttgtttgtctttcttgtttcatacatatatttgattggttcagattgtcagat 40461905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 244 - 447
Target Start/End: Original strand, 42106245 - 42106446
Alignment:
Q  244 tcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagat 343  Q
    ||||||||||  |||||||||| |||||||||| ||||||  |||| || ||| ||||||||||||   |  |||||||| | |||||||||||||||||    
T  42106245 tcgtcgtctttgtgcgacgttgttttgttcgtcatctttg--cgacgttatttgtctttcttgttttgtttgggtatttgttcggttcagattgtcagat 42106342  T
Q  344 caacttcgattcagtgcagatccaatcaatgactttgacgtcatc-cacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatg 442  Q
    || ||||||| ||||||||||| ||||||||||||||  ||||||  | |||||| | || || ||| || ||||||||||| ||||||  |||||||||    
T  42106343 cagcttcgatccagtgcagatcaaatcaatgactttg-ggtcatcaaaagttgcaaatccggagacaagggtattccggagacttaaatacagtcatatg 42106441  T
Q  443 tgtag 447  Q
    |||||    
T  42106442 tgtag 42106446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 369 - 447
Target Start/End: Original strand, 10977473 - 10977551
Alignment:
Q  369 tcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    |||||||||||| |||||||||||||||||| || |||||||||||||| ||||||||||||| |||||||||||||||    
T  10977473 tcaatgactttggcgtcatccacgttgcagatccggatacatggttatttcggagatttaaatatagtcatatgtgtag 10977551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 329 - 447
Target Start/End: Original strand, 37051784 - 37051902
Alignment:
Q  329 ttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagattta 428  Q
    |||||||||||||||||  |||||| |||||||||||||| |||| |||||| ||||||| |||||||||| || ||  ||| | ||||||| ||||||     
T  37051784 ttcagattgtcagatcagtttcgatccagtgcagatccaaccaataactttggcgtcatcaacgttgcagatccggaggcatagctattccgaagatttt 37051883  T
Q  429 aatgtagtcatatgtgtag 447  Q
    ||| ||||||||| |||||    
T  37051884 aatatagtcatatttgtag 37051902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 270 - 380
Target Start/End: Original strand, 2598210 - 2598319
Alignment:
Q  270 gttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaat 369  Q
    |||| |||||||||||| || |||||| |||||||||||||  ||| ||||||| | |||| ||| | | |||||||||| |||| ||||||||||||||    
T  2598210 gttcatcgtctttgtgcaacgttgtttctctttcttgtttcgttcatgtatttgttcggtttagagttt-agatcaactttgatttagtgcagatccaat 2598308  T
Q  370 caatgactttg 380  Q
    |||||||||||    
T  2598309 caatgactttg 2598319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 185 - 447
Target Start/End: Original strand, 50460239 - 50460498
Alignment:
Q  185 tttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgt 284  Q
    |||| |||| |||||||||||||||||||||||||||||          ||| ||||||| |||| |||  ||||| |||| ||||||||| ||||||||    
T  50460239 tttctcttttattgaaataagtgattttcacatctattt--tatttttctttcgtgattttgtcgccttagtgcgatgttgttttgttcgttgtctttgt 50460336  T
Q  285 gcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgt 384  Q
    |     |||||| |||||||| ||||  |||| |||||| | |||| ||||||||||||||  |||||| || |||| ||||||||||| ||||||||||    
T  50460337 gtttg-ttgtttgtctttcttatttcgttcagttatttgttcggtttagattgtcagatcagtttcgatccaatgcaaatccaatcaataactttgacgt 50460435  T
Q  385 catccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
      || |||||||| | ||  | |||||  ||||||  ||| || ||| |||||||||||||||    
T  50460436 tgtcaacgttgcaaatccgaagacatgagtattccaaagacttgaatatagtcatatgtgtag 50460498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 293 - 449
Target Start/End: Original strand, 27831253 - 27831409
Alignment:
Q  293 gtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacg 392  Q
    |||| ||||||||||||   |||  |||||| ||| ||||||||||||||||| ||| |||  |||||||||| |||| ||||||||| |||| ||||||    
T  27831253 gtttgtctttcttgttttgttcatatatttgtttgattcagattgtcagatcagctttgatctagtgcagatctaatccatgactttggcgtcgtccacg 27831352  T
Q  393 ttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtagtc 449  Q
     || ||| || || ||| || ||||||||||| || |||||  ||| ||||||||||    
T  27831353 ctgtagatccggagacacgggtattccggagacttgaatgtgatcacatgtgtagtc 27831409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 234 - 385
Target Start/End: Original strand, 43242902 - 43243054
Alignment:
Q  234 ttttgtgatttcgtcgtcttcttgcgacgttggttt-gttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttca 332  Q
    |||||||||||| | |||||  |||||||||| ||| ||| | |||||||||| | | |||||| | ||| |||||||  ||||||||||  | || |||    
T  43242902 ttttgtgatttcattgtcttaatgcgacgttgcttttgtttgccgtctttgtggggctttgtttgtttttattgtttcattcaggtatttattcggctca 43243001  T
Q  333 gattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtc 385  Q
    |||||||| |||||||| |||  |||||||||| |||||||||| ||||||||    
T  43243002 gattgtcatatcaactttgatatagtgcagatcaaatcaatgaccttgacgtc 43243054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 293 - 447
Target Start/End: Original strand, 26412442 - 26412598
Alignment:
Q  293 gtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtg--cagatccaatcaatgactttgacgtcatcca 390  Q
    |||| ||| |||||||||  ||| ||||||| | ||||||||||||||||| || |||||| |||||  || ||||||||||||| |||| |||| || |    
T  26412442 gtttgtctctcttgtttcgttcaagtatttgttcggttcagattgtcagattaaattcgatccagtgcacatatccaatcaatgagtttggcgtcgtcaa 26412541  T
Q  391 cgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||||||| | || || |||||  |||| |  ||| |||||| |||||||||||||||    
T  26412542 cgttgcaaatccggagacatgaatatttcaaagacttaaatatagtcatatgtgtag 26412598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 183 - 297
Target Start/End: Original strand, 42106157 - 42106270
Alignment:
Q  183 tatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtcttt 282  Q
    ||||||||||| ||||||||||||||||||||||| |||||||        |||  |||||||| ||||||  |||||||||| |||  |||||||||||    
T  42106157 tatttcccttttattgaaataagtgattttcacatatatttcgtttttgc-tttcctgatttcgccgtcttagtgcgacgttgtttttatcgtcgtcttt 42106255  T
Q  283 gtgcgacattgtttt 297  Q
    ||||||| |||||||    
T  42106256 gtgcgacgttgtttt 42106270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 238 - 310
Target Start/End: Complemental strand, 1220262 - 1220190
Alignment:
Q  238 gtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttc 310  Q
    ||||||| ||||||||  ||||| |||| ||||||||||||||||||||| | |||||| ||||| |||||||    
T  1220262 gtgattttgtcgtcttagtgcgatgttgttttgttcgtcgtctttgtgcggctttgtttgtcttttttgtttc 1220190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 313 - 399
Target Start/End: Original strand, 33793940 - 33794026
Alignment:
Q  313 tcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcaga 399  Q
    ||||||||||| | | |||||||| ||| ||||||||| || ||||| | ||||||||| ||| |||  ||||||||||||||||||    
T  33793940 tcaggtatttggtcgattcagattatcatatcaacttcaatccagtgtatatccaatcattgattttagcgtcatccacgttgcaga 33794026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 313 - 379
Target Start/End: Complemental strand, 48061029 - 48060963
Alignment:
Q  313 tcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgacttt 379  Q
    ||||||||||| | ||||||||||||||||| |  ||||||  |||||| |||||||||||||||||    
T  48061029 tcaggtatttgttcggttcagattgtcagattagtttcgatctagtgcaaatccaatcaatgacttt 48060963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 202 - 388
Target Start/End: Original strand, 40365290 - 40365474
Alignment:
Q  202 taagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctt 301  Q
    |||||||||||||||||||||| |       |||||||||||| ||| ||||  ||||||||||||||||| ||||||||||| || | |||||| | ||    
T  40365290 taagtgattttcacatctattttgtttttt-attttgtgattttgtcatcttaatgcgacgttggtttgtttgtcgtctttgtacggcgttgtttgt-tt 40365387  T
Q  302 tcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaat-gactttgacgtcatc 388  Q
    | | | |||  | ||||||||| |  ||| |||||||||||||| |||| || || | |||||| ||||||| ||||||| |||||||    
T  40365388 tttagattcgtttaggtatttgttcagtttagattgtcagatcagcttcaatcca-tacagatcaaatcaatggactttggcgtcatc 40365474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 407 - 447
Target Start/End: Complemental strand, 14741228 - 14741188
Alignment:
Q  407 acatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||||||||||||||||||||||||  |||||||||||||||    
T  14741228 acatggttattccggagatttaaaaatagtcatatgtgtag 14741188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 238 - 385
Target Start/End: Original strand, 33069755 - 33069900
Alignment:
Q  238 gtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattg 337  Q
    |||| ||| |||||||  ||| || ||| |||||| |||| |||||| ||||||||||| ||||| |||| |   |||  | |||| || ||||| ||||    
T  33069755 gtgaattcttcgtcttagtgcaacattgttttgtttgtcgcctttgtacgacattgtttgtcttttttgtcttgttcatatgtttgtttagttcatattg 33069854  T
Q  338 tcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtc 385  Q
    |||  | | ||||||| ||||||||||||||||||| |||||||||||    
T  33069855 tca--ttagcttcgatgcagtgcagatccaatcaataactttgacgtc 33069900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 329 - 381
Target Start/End: Original strand, 35670603 - 35670655
Alignment:
Q  329 ttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttga 381  Q
    |||||||||| |||| ||||||||| || |||| |||||||||||||||||||    
T  35670603 ttcagattgttagataaacttcgatccaatgcatatccaatcaatgactttga 35670655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 441
Target Start/End: Original strand, 4081945 - 4082016
Alignment:
Q  370 caatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatat 441  Q
    ||||||||||| |||| || |||||||||| ||  ||||||| |||||||||||| || ||| |||||||||    
T  4081945 caatgactttggcgtcgtcaacgttgcagatccgaatacatgattattccggagacttgaatatagtcatat 4082016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 441
Target Start/End: Original strand, 53402858 - 53402929
Alignment:
Q  370 caatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatat 441  Q
    ||||||||||| |||| || |||||||||| ||||| |||||  |||||||||||  ||||| |||||||||    
T  53402858 caatgactttggcgtcgtcaacgttgcagatccagagacatgagtattccggagacataaatatagtcatat 53402929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 187 - 225
Target Start/End: Original strand, 26412381 - 26412419
Alignment:
Q  187 tccctttaattgaaataagtgattttcacatctatttcg 225  Q
    ||||||| ||||||||||| |||||||||||||||||||    
T  26412381 tcccttttattgaaataagcgattttcacatctatttcg 26412419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 234 - 295
Target Start/End: Complemental strand, 21085961 - 21085900
Alignment:
Q  234 ttttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtt 295  Q
    |||||||||||||| | | |  ||| |||||| ||||||||||||||||||| |||||||||    
T  21085961 ttttgtgatttcgtagccattgtgcaacgttgttttgttcgtcgtctttgtgggacattgtt 21085900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 455
Target Start/End: Complemental strand, 31462638 - 31462553
Alignment:
Q  370 caatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtagtcatatgt 455  Q
    ||||||||||| |||| || ||| |||||| ||||| ||||| ||||||| ||||| | ||| || |||||| ||||| |||||||    
T  31462638 caatgactttggcgtcgtcaacggtgcagatccagagacatgattattccagagatatgaatataatcatatttgtaggcatatgt 31462553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 168 - 225
Target Start/End: Original strand, 33076342 - 33076399
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcg 225  Q
    |||||||| ||||  | ||| ||||| |||||||||||||||||| ||||||||||||    
T  33076342 tctaactcattttcctcttttccttttattgaaataagtgatttttacatctatttcg 33076399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 173; Significance: 8e-93; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 173; E-Value: 8e-93
Query Start/End: Original strand, 185 - 447
Target Start/End: Complemental strand, 12270 - 12009
Alignment:
Q  185 tttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgt 284  Q
    ||||||||| |||||||||||||||||||||| ||||||||       |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  12270 tttcccttttattgaaataagtgattttcacacctatttcgtttttt-attttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgt 12172  T
Q  285 gcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgt 384  Q
    ||||| |||||| | |||||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||| |||    
T  12171 gcgacgttgtttgtttttcttgtttctctcaggtatttgatcggttcagattgtcagatcagcttcgatttagtgcagatccaatcaatgactttggcgt 12072  T
Q  385 catccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||||||||||||||| || || ||||||||||||||||||||||||| |||||| ||| ||||    
T  12071 catccacgttgcagatccggagacatggttattccggagatttaaatatagtcacatgcgtag 12009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 173; Significance: 8e-93; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 173; E-Value: 8e-93
Query Start/End: Original strand, 185 - 447
Target Start/End: Original strand, 31645876 - 31646137
Alignment:
Q  185 tttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgt 284  Q
    ||||||||| ||||||||||||||||||||||||||||| |       ||||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  31645876 tttcccttttattgaaataagtgattttcacatctattttgtttttt-attttgtgatttcttcgtcttcgtgcgacgttggtttgttcgtcgtctttgt 31645974  T
Q  285 gcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgt 384  Q
    ||||| |||||| | || |||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||    
T  31645975 gcgacgttgtttgttttccttgtttctctcaggtatttgatcagttcagattgtcagatcaacttcgatccagtgcagatccaatcaatgactttggtgt 31646074  T
Q  385 catccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||||||||||||||| || |||||||||||||||||||||||||||| |||||||||||||||    
T  31646075 catccacgttgcagatccggatacatggttattccggagatttaaatatagtcatatgtgtag 31646137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 168; E-Value: 8e-90
Query Start/End: Original strand, 168 - 447
Target Start/End: Complemental strand, 29310433 - 29310160
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    ||||||| ||||| |  ||||||||| ||||||||||||||||||||||||| |||         |||||||||||||||||||||| ||||||||||||    
T  29310433 tctaacttgttttttcttttcccttttattgaaataagtgattttcacatctgttt------tttattttgtgatttcgtcgtcttcgtgcgacgttggt 29310340  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    |||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||  ||||| ||| |||||||| ||||||| |||||||||||||    
T  29310339 ttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcagttcaaattatcagatcagcttcgatccagtgcagatcca 29310240  T
Q  368 atcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||||||||||||| |||||||||||||||||| || |||||||||||||||||||||||||||| |||||||||||||||    
T  29310239 atcaatgactttggcgtcatccacgttgcagatccggatacatggttattccggagatttaaatatagtcatatgtgtag 29310160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 172 - 447
Target Start/End: Original strand, 4070588 - 4070859
Alignment:
Q  172 actcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgt 271  Q
    |||||||||  ||||||| ||| ||||||||||||||||||||||| |||||||       |||||||||||||||||| ||| ||||||||||||| ||    
T  4070588 actcgtttttctatttcctttttattgaaataagtgattttcacatttatttcgtttt---attttgtgatttcgtcgtattcgtgcgacgttggtt-gt 4070683  T
Q  272 tcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatca 371  Q
    |||||||||||||||||| |||||| | |||||||||||||||||||||||||| | ||||||||||||||||| |||||||  ||||||||||||||||    
T  4070684 tcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcgtttcagattgtcagatcagcttcgatctagtgcagatccaatca 4070783  T
Q  372 atgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||||||||| |||||||||||||||||| || || ||||||||||||||||||||||||| |||||||||||||||    
T  4070784 atgactttggcgtcatccacgttgcagatccggaaacatggttattccggagatttaaatatagtcatatgtgtag 4070859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 185 - 447
Target Start/End: Complemental strand, 6887245 - 6886984
Alignment:
Q  185 tttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgt 284  Q
    ||||||||| ||||||||||||||||||||||||||||| |        ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  6887245 tttcccttttattgaaataagtgattttcacatctattttgttttttc-ttttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgt 6887147  T
Q  285 gcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgt 384  Q
    ||||| |||||| | ||||||| ||||||||||||||||||  ||||||||||| |||| | ||||||| |||||||||||||||||||||||||| |||    
T  6887146 gcgacgttgtttgtttttcttgcttctctcaggtatttgatcagttcagattgttagattagcttcgatccagtgcagatccaatcaatgactttggcgt 6887047  T
Q  385 catccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||||||||||||||| || |||||||||| ||||||||||||||||| |||||||||||||||    
T  6887046 catccacgttgcagatccggatacatggtaattccggagatttaaatatagtcatatgtgtag 6886984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 170 - 443
Target Start/End: Complemental strand, 4727010 - 4726738
Alignment:
Q  170 taactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggttt 269  Q
    |||||||||||  ||||||||||| ||||||||||||||||||||||||| || |        |||||||||||||||||||||| ||||| |||||||     
T  4727010 taactcgtttttctatttcccttttattgaaataagtgattttcacatctgttac-atttcttattttgtgatttcgtcgtcttcgtgcgatgttggtta 4726912  T
Q  270 gttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaat 369  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||||||||| ||||||||||||||||||| |||| || |||||||||||||||    
T  4726911 gttcgtcgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagattgtcagatcagcttcaatccagtgcagatccaat 4726812  T
Q  370 caatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgt 443  Q
    |||||||||||  |||||| |||||||||| || || |||||  |||||||||||||||||| |||||||||||    
T  4726811 caatgactttggtgtcatctacgttgcagatccggagacatgactattccggagatttaaatatagtcatatgt 4726738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 168 - 447
Target Start/End: Original strand, 28618634 - 28618910
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    |||||||||||||  ||||||||||| ||||||||||||||||| ||||||||||| |       |||||||||||||||||||||| ||||||||||||    
T  28618634 tctaactcgtttttctatttcccttttattgaaataagtgattt-cacatctattttgtttttt-attttgtgatttcgtcgtcttcgtgcgacgttggt 28618731  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    | |||| ||||||||||||||| || ||| | |||||||||||||||||||||||||| | || |||||||||||||| ||||||| |||||||||||||    
T  28618732 t-gttcatcgtctttgtgcgacgttatttgtttttcttgtttctctcaggtatttgatcgctttagattgtcagatcagcttcgatccagtgcagatcca 28618830  T
Q  368 atcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||||||||||||| |||||||||||||||||| || || ||||||||||| |||| |||||||| |||||||||||||||    
T  28618831 atcaatgactttggcgtcatccacgttgcagatccggaaacatggttatttcggaaatttaaatatagtcatatgtgtag 28618910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 168 - 447
Target Start/End: Original strand, 5378332 - 5378610
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    |||||||||||||  ||||||||||| |||||||||||||||||||| || | || |        |||||||||||||||||||||| |||||  |||||    
T  5378332 tctaactcgtttttctatttcccttttattgaaataagtgattttcatatttgttgc-attttttattttgtgatttcgtcgtcttcgtgcgaaattggt 5378430  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||| | |||||| ||||||||||||| |||||  |||||| || |||||||| |    
T  5378431 ttgttcgtcgtctttgtgcgacattgcttgtctttcttgtttctctcagatgtttgatcggttcagattgtcggatcagtttcgatccaatgcagatcaa 5378530  T
Q  368 atcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||||||||||||| |||||||||||||||||| || || |||||  ||||||||||||||||||||||||||||||||||    
T  5378531 atcaatgactttggcgtcatccacgttgcagatccggagacatgactattccggagatttaaatgtagtcatatgtgtag 5378610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 197 - 443
Target Start/End: Complemental strand, 10924188 - 10923944
Alignment:
Q  197 tgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgttt 296  Q
    |||||||||||||||| ||||||||||||       |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||     
T  10924188 tgaaataagtgatttttacatctatttcgtttttt-attttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgttg 10924090  T
Q  297 ttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgc 396  Q
    || ||||||||||||||||| |||||||| |||||| |||||| |||||||||| || |||||||||||||||||| ||||||| ||| |||||||||||    
T  10924089 tt-tttcttgtttctctcagatatttgatcggttcaaattgtcggatcaacttcaatgcagtgcagatccaatcaacgactttggcgttatccacgttgc 10923991  T
Q  397 agacccagatacatggttattccggagatttaaatgtagtcatatgt 443  Q
    ||| || |||  |||||||||| |||||||||||| |||||||||||    
T  10923990 agatccggatgaatggttattcaggagatttaaatatagtcatatgt 10923944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 233 - 447
Target Start/End: Complemental strand, 9034962 - 9034748
Alignment:
Q  233 attttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttca 332  Q
    ||||||||||||| |||||||| |||||||||||||||||| |||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||    
T  9034962 attttgtgatttcatcgtcttcgtgcgacgttggtttgttcctcgtctttgtgcgacattgtctgtctttcttgtttctctcaggtatttgatcggttca 9034863  T
Q  333 gattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatg 432  Q
    |||||||||||||  ||||||  |||||||||||||||||||||||||  ||||| || |||||||| ||| | ||||||||||| |||||||||||||     
T  9034862 gattgtcagatcagtttcgatctagtgcagatccaatcaatgactttggggtcattcatgttgcagatccaaagacatggttatttcggagatttaaata 9034763  T
Q  433 tagtcatatgtgtag 447  Q
    |||| ||||||||||    
T  9034762 tagttatatgtgtag 9034748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 167 - 441
Target Start/End: Original strand, 2415429 - 2415702
Alignment:
Q  167 ttctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttgg 266  Q
    |||||||| |||||  | ||||||||| |||||||||||||||||||| || ||||||        |||||||||||| ||||||||| |||||||||||    
T  2415429 ttctaacttgtttttctttttcccttttattgaaataagtgattttcatatatatttc-attttttattttgtgattttgtcgtcttcatgcgacgttgg 2415527  T
Q  267 tttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcc 366  Q
    ||||||||| |||||||||||||||||||| ||||| ||||| || ||||||||||| | ||||||||||||||||||| ||||||| |||||||||| |    
T  2415528 tttgttcgttgtctttgtgcgacattgtttgtcttttttgttactttcaggtatttgttcggttcagattgtcagatcagcttcgatccagtgcagattc 2415627  T
Q  367 aatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatat 441  Q
    |||||| |||||| || |||||||||||||||| ||  | ||||| |||||||| |||  ||||| |||||||||    
T  2415628 aatcaacgactttaacttcatccacgttgcagatccgaagacatgattattccgaagacataaatatagtcatat 2415702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 168 - 443
Target Start/End: Complemental strand, 41063480 - 41063206
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    |||||||||||||  | ||||| ||| |||||||||| ||||||||||||||||||||       |||||||||||||||||||||| |  |||||||||    
T  41063480 tctaactcgtttttctctttccattttattgaaataaatgattttcacatctatttcgtttttt-attttgtgatttcgtcgtcttcgtatgacgttggt 41063382  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    ||||| |||| ||||| ||||| |||||| | |||||| |||||||| | |||||||| |||||||||| | | |||| ||||||| |||||||||||||    
T  41063381 ttgtttgtcggctttgagcgacgttgtttgtttttcttatttctctcggctatttgatcggttcagattcttatatcagcttcgatccagtgcagatcca 41063282  T
Q  368 atcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgt 443  Q
    || |||||||||||| |||||||||||||||| ||  | ||||||||||||||||||||||||| || ||||||||    
T  41063281 attaatgactttgacatcatccacgttgcagatccgcagacatggttattccggagatttaaatataatcatatgt 41063206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 183 - 447
Target Start/End: Original strand, 41554532 - 41554795
Alignment:
Q  183 tatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtcttt 282  Q
    ||||||||||| ||||||||||||||||| |||||||||||||        | | ||||||||||||||||  |||||| ||| ||| ||||||||| ||    
T  41554532 tatttcccttttattgaaataagtgatttacacatctatttcgtttcttt-tgtagtgatttcgtcgtcttagtgcgaccttgttttattcgtcgtcctt 41554630  T
Q  283 gtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgac 382  Q
    ||||||| |||||| ||||||||||||| |||||||||||| | ||||||||||||||||||| ||||||| ||||||||||| ||||||||||||||      
T  41554631 gtgcgacgttgtttgtctttcttgtttcgctcaggtatttgttcggttcagattgtcagatcagcttcgatccagtgcagatcaaatcaatgactttgga 41554730  T
Q  383 gtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
     || || |||||||||| || || |||||| ||||||||||| |||||| |||||||||||||||    
T  41554731 atcgtcaacgttgcagatccggagacatgggtattccggagacttaaatatagtcatatgtgtag 41554795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 271 - 447
Target Start/End: Original strand, 35906401 - 35906577
Alignment:
Q  271 ttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatc 370  Q
    ||||||||||||||||||| |||||| | ||||||||||||||||||||||||||  ||||||||| || ||||| ||||||| ||||||||||||||||    
T  35906401 ttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcagttcagattatcggatcagcttcgatccagtgcagatccaatc 35906500  T
Q  371 aatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    |||||||||| |||||||||| ||||||| || |||||||||||||| ||||||||||||| |||||||||||||||    
T  35906501 aatgactttggcgtcatccacattgcagatccggatacatggttatttcggagatttaaatatagtcatatgtgtag 35906577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 236 - 447
Target Start/End: Original strand, 20270811 - 20271022
Alignment:
Q  236 ttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagat 335  Q
    ||||||||||||||||||  |||||||||| ||||||||||||||||||||||| ||||||  ||||||||||||  ||||||||||| | |||||||||    
T  20270811 ttgtgatttcgtcgtcttagtgcgacgttgttttgttcgtcgtctttgtgcgacgttgtttgcctttcttgtttcgttcaggtatttgttcggttcagat 20270910  T
Q  336 tgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtag 435  Q
    |||||||||| |||| || ||||||||||| ||||||||||||||  ||| || |||||||||| || || |||||| |||| |||||| |||||| |||    
T  20270911 tgtcagatcagcttcaatccagtgcagatcaaatcaatgactttggagtcttcaacgttgcagatccggagacatggatatttcggagacttaaatatag 20271010  T
Q  436 tcatatgtgtag 447  Q
    ||||||||||||    
T  20271011 tcatatgtgtag 20271022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 183 - 447
Target Start/End: Complemental strand, 33486638 - 33486375
Alignment:
Q  183 tatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtcttt 282  Q
    ||||||||||| ||||||||||||||||| |||||||||||||        ||||||||||||||||||||  |||||| ||| ||||||||||||||||    
T  33486638 tatttcccttttattgaaataagtgatttacacatctatttcgtttcttt-ttttgtgatttcgtcgtcttagtgcgaccttgttttgttcgtcgtcttt 33486540  T
Q  283 gtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgac 382  Q
    ||||||| |||||| |||||||||||||  ||| ||||||| | |||||||||||||| |||| ||||||| ||||||||||| || |||||||||||      
T  33486539 gtgcgacgttgtttgtctttcttgtttcgttcaagtatttgttcggttcagattgtcaaatcagcttcgatccagtgcagatcaaaccaatgactttgga 33486440  T
Q  383 gtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||| || |||||||||| || ||  ||||| ||||| ||||| |||||| | |||||||||||||    
T  33486439 gtcgtcaacgttgcagatccggaggcatgggtattctggagacttaaatatggtcatatgtgtag 33486375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 168 - 443
Target Start/End: Complemental strand, 19646125 - 19645852
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    |||||||| ||||  | ||||||||| | |||||||||||||||||||||||||||||       ||||||||||||  |||||||  |||| |||  ||    
T  19646125 tctaactcatttttctctttcccttttaatgaaataagtgattttcacatctatttcgtttttt-attttgtgattttatcgtctttgtgcggcgtcagt 19646027  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    ||||| |||||||||||| ||| |||||| |||||||||||||| | | ||||||| | | |||||||||||||||||  ||||||  ||||||||||||    
T  19646026 ttgtttgtcgtctttgtgtgacgttgtttgtctttcttgtttctttgaagtatttgttagattcagattgtcagatcagattcgatcaagtgcagatcca 19645927  T
Q  368 atcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgt 443  Q
    |||||||||||||  ||||||||||||||| | ||  | ||||||||||||||||||||| ||| |||||||||||    
T  19645926 atcaatgactttggtgtcatccacgttgca-atccgaagacatggttattccggagatttgaatatagtcatatgt 19645852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 168 - 446
Target Start/End: Complemental strand, 22397632 - 22397359
Alignment:
Q  168 tctaactcgttttgt-tatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttgg 266  Q
    ||||||||||||| | ||||| |||||| || |||||||| ||||||||||||||||||        ||||||||||||||||||||  ||||||||||     
T  22397632 tctaactcgttttttctattttccttta-ttaaaataagtaattttcacatctatttcggtttttc-ttttgtgatttcgtcgtcttagtgcgacgttgt 22397535  T
Q  267 tttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcc 366  Q
    |||||||||||||||||||||||||||||| |||||||| ||||  ||||||||||| | | ||||||||||||||||| |||||||  ||||||||||     
T  22397534 tttgttcgtcgtctttgtgcgacattgtttgtctttcttatttcgttcaggtatttgttcgattcagattgtcagatcagcttcgatctagtgcagatca 22397435  T
Q  367 aatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgta 446  Q
    ||||||||||||||  ||| ||    ||||||| |  || |||| | ||||||||||| |||||| ||||||||||||||    
T  22397434 aatcaatgactttggagtcgtc----ttgcagatctggagacattgatattccggagacttaaatatagtcatatgtgta 22397359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 183 - 447
Target Start/End: Complemental strand, 18472793 - 18472532
Alignment:
Q  183 tatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtcttt 282  Q
    ||||| ||||| |||| |||||||||||| ||||||||||| |        ||||||||||||||||||||  || ||| ||| ||||||| ||||||||    
T  18472793 tattttccttttattgcaataagtgatttacacatctattttgtttctt--ttttgtgatttcgtcgtcttagtgtgactttg-tttgttcctcgtcttt 18472697  T
Q  283 gtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgac 382  Q
    ||||||| |||||| |||||||||||||  ||||||||||| | | ||||||||||||||||||||||||| ||||||||||| ||||||||||||||      
T  18472696 gtgcgacgttgtttgtctttcttgtttcattcaggtatttgttcgattcagattgtcagatcaacttcgatccagtgcagatcaaatcaatgactttgta 18472597  T
Q  383 gtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||| || |||||| ||| |  || |||||  ||||||||||| ||| || |||||||||||||||    
T  18472596 gtcgtcaacgttgtagatctggagacatgagtattccggagacttacatatagtcatatgtgtag 18472532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 238 - 447
Target Start/End: Original strand, 40774859 - 40775069
Alignment:
Q  238 gtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttt-tctttcttgtttctctcaggtatttgattggttcagatt 336  Q
    ||||||| ||||||||  |||||||||| ||||| |||||||||||||| || |||| || |||||||||||||  ||||||||||| | ||||||||||    
T  40774859 gtgattttgtcgtcttagtgcgacgttgttttgtccgtcgtctttgtgcaaccttgtattgtctttcttgtttcgttcaggtatttgttcggttcagatt 40774958  T
Q  337 gtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagt 436  Q
    ||||||||| ||||||| ||||| ||||| ||||||||||||||  ||| || |||||||||| || || |||||| ||||||||| | |||||| ||||    
T  40774959 gtcagatcagcttcgatccagtgtagatcaaatcaatgactttggagtcttcaacgttgcagatccggagacatgggtattccggaaacttaaatatagt 40775058  T
Q  437 catatgtgtag 447  Q
    |||||||||||    
T  40775059 catatgtgtag 40775069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 183 - 447
Target Start/End: Complemental strand, 8812220 - 8811958
Alignment:
Q  183 tatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtcttt 282  Q
    ||||||| ||| |||||| ||||||||||||| ||||||||||        ||| ||||||||| ||||||  |||||||||| ||||||||||||||||    
T  8812220 tatttcctttttattgaagtaagtgattttcatatctatttcgtttttgc-tttcgtgatttcgccgtcttagtgcgacgttgttttgttcgtcgtcttt 8812122  T
Q  283 gtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgac 382  Q
    ||| ||  |||||| ||||||||||||   || |||||||| | ||||||||||||||||||| ||||| | ||||||||||| |||||||||||||       
T  8812121 gtgggag-ttgtttgtctttcttgttttgttcgggtatttgttcggttcagattgtcagatcagcttcggtccagtgcagatcaaatcaatgactttaga 8812023  T
Q  383 gtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    |||||| |||||||||| |  || |||  | ||||||||||| |||||| |||||||||||||||    
T  8812022 gtcatcaacgttgcagatctggagacaatggtattccggagacttaaatatagtcatatgtgtag 8811958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 238 - 447
Target Start/End: Complemental strand, 6647928 - 6647719
Alignment:
Q  238 gtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattg 337  Q
    ||||||||||||||||  ||||||| ||   | ||||||||||||||||| | |||||| ||||||||||||   |||| |||||| | |||||||||||    
T  6647928 gtgatttcgtcgtcttagtgcgacgatgtgctattcgtcgtctttgtgcggcgttgtttgtctttcttgttttattcagctatttgttcggttcagattg 6647829  T
Q  338 tcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtc 437  Q
    |||| ||| ||| |||  ||||||||||||||||||||||| | ||||||| |||||||||| || || |||||| ||||||||||| || ||| |||||    
T  6647828 tcaggtcagcttagatcaagtgcagatccaatcaatgacttcggcgtcatcaacgttgcagatccggagacatggatattccggagactttaatatagtc 6647729  T
Q  438 atatgtgtag 447  Q
    ||||||||||    
T  6647728 atatgtgtag 6647719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 183 - 447
Target Start/End: Original strand, 34843961 - 34844224
Alignment:
Q  183 tatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtcttt 282  Q
    ||||||||||| ||||||||||| ||||||||||||||||| |        ||||||||||| |||||| |  |||||| ||| | |||| ||| |||||    
T  34843961 tatttcccttttattgaaataagcgattttcacatctattttgttttttc-ttttgtgattttgtcgtcctagtgcgactttgttatgtttgtcatcttt 34844059  T
Q  283 gtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgac 382  Q
     | |||| |||||| ||||| |||||||  ||||||||||| | | ||||||||||||||||| ||||||| ||||||||||| ||||||||||||||      
T  34844060 atacgacgttgtttgtcttttttgtttcgttcaggtatttgctcgattcagattgtcagatcagcttcgatccagtgcagatcaaatcaatgactttgga 34844159  T
Q  383 gtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||| || | ||||||||||| || | |||| ||||| || || |||||| |||||||||||||||    
T  34844160 gtcgtcaatgttgcagacccggagatatgggtattctggcgacttaaatatagtcatatgtgtag 34844224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 168 - 431
Target Start/End: Original strand, 15710572 - 15710833
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    |||||||||||||  | ||||||||| |||||||||||||||||||||||||||||||        |||  |||||| ||| ||||  |||||||||| |    
T  15710572 tctaactcgtttttctctttcccttttattgaaataagtgattttcacatctatttcgttttttc-tttcatgattttgtcatcttagtgcgacgttgtt 15710670  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    | |||||| ||||||||| | | |||||| |||||||||||||  ||||||||||| | |||||  |||||||||||| ||| |||  ||||||||||||    
T  15710671 tcgttcgttgtctttgtgtggcgttgtttgtctttcttgtttcgttcaggtatttgttcggttcgaattgtcagatcagcttagatctagtgcagatcca 15710770  T
Q  368 atcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaat 431  Q
    ||||||| | ||| ||||||| |||||||||| | ||| ||||   ||||||||| ||||||||    
T  15710771 atcaatggc-ttggcgtcatcaacgttgcagatctagagacatatgtattccggatatttaaat 15710833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 234 - 447
Target Start/End: Complemental strand, 40565174 - 40564963
Alignment:
Q  234 ttttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcag 333  Q
    ||||||||||||||||||||  ||||||  || |||||| |||||||||||||||| |||||| |||||  |   |   |||||| |||| ||| ||||     
T  40565174 ttttgtgatttcgtcgtcttagtgcgaccatgttttgtttgtcgtctttgtgcgacgttgtttgtcttt--tccctagttcaggtgtttgtttgattcat 40565077  T
Q  334 attgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgt 433  Q
    ||||||||||||  |||||| ||||||| |||||| ||||||||||| ||||||| |||||||||| || || |||||| |||||||||||||| ||| |    
T  40565076 attgtcagatcagtttcgatccagtgcaaatccaaccaatgactttggcgtcatcaacgttgcagatccggagacatggctattccggagattttaatat 40564977  T
Q  434 agtcatatgtgtag 447  Q
    |||||||| |||||    
T  40564976 agtcatatttgtag 40564963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 183 - 447
Target Start/End: Complemental strand, 14910733 - 14910482
Alignment:
Q  183 tatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtcttt 282  Q
    ||||||||||| |||||||||||||||||||||||||||||             ||||||||| |||||||  | |||| ||| |||||||| ||| |||    
T  14910733 tatttcccttttattgaaataagtgattttcacatctattt-------------tgtgatttcatcgtcttagtacgacattgttttgttcgccgtattt 14910647  T
Q  283 gtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgac 382  Q
    |||  ||||||||| |||||||||||||  ||| ||||||| | | || |||||||||||||||||||||| ||  ||| ||| |||||||||||||||     
T  14910646 gtgtaacattgtttgtctttcttgtttcgttcatgtatttgttcgttttagattgtcagatcaacttcgatccatcgcatatcaaatcaatgactttgaa 14910547  T
Q  383 gtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||  || ||| |||||| || || |||||  ||||||||||| |||||| |||| ||||||||||    
T  14910546 gttgtcaacgatgcagatccggagacatgagtattccggagacttaaatatagttatatgtgtag 14910482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 275 - 447
Target Start/End: Original strand, 28500825 - 28500997
Alignment:
Q  275 tcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatg 374  Q
    ||||||| ||||| |||||||| |||||||| ||||  || |||||||| | |||||||||||||| |||||||||||| |||| | |||||||||||||    
T  28500825 tcgtcttagtgcggcattgtttgtctttcttatttcgttcgggtatttgttcggttcagattgtcatatcaacttcgatccagtacggatccaatcaatg 28500924  T
Q  375 actttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    |||||| |||| ||||||||||||| || || |||||| ||||| |||||  | ||| ||||||||| |||||    
T  28500925 actttgtcgtcctccacgttgcagatccggagacatgggtattctggagacatgaatatagtcatatctgtag 28500997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 237 - 439
Target Start/End: Complemental strand, 6074752 - 6074550
Alignment:
Q  237 tgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagatt 336  Q
    |||||||||||||||||  ||| ||  || |||||| |||||||||||||||| |||||| |||||    | |   ||| || |||| | ||||||||||    
T  6074752 tgtgatttcgtcgtcttagtgcaacactgttttgtttgtcgtctttgtgcgaccttgtttgtcttttccctcttgttcaagtgtttgttcggttcagatt 6074653  T
Q  337 gtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagt 436  Q
    ||||||||||||||||| ||||| |||||||||||||||||||| ||||||| |||||||||| || ||  |||||||||||| || |||| ||| ||||    
T  6074652 gtcagatcaacttcgatccagtgtagatccaatcaatgactttggcgtcatcaacgttgcagatccggaggcatggttattccagatattttaatatagt 6074553  T
Q  437 cat 439  Q
    |||    
T  6074552 cat 6074550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 168 - 398
Target Start/End: Complemental strand, 32390731 - 32390502
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    |||||||||||||  | ||||| ||| |||||||||||||||||||||||||||||||       |||||||||||||||| | ||  ||||||||||||    
T  32390731 tctaactcgtttttctctttcctttttattgaaataagtgattttcacatctatttcgtttttt-attttgtgatttcgtcatattagtgcgacgttggt 32390633  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    | ||| || ||||||||||| | |||||| |||||||||||||  || |||||||| | |||||| ||| |||||| | |||| ||  |||| ||||| |    
T  32390632 tcgtttgttgtctttgtgcggcgttgtttgtctttcttgtttcattcgggtatttgttcggttcaaattatcagattagcttcaatctagtgtagatcta 32390533  T
Q  368 atcaatgactttgacgtcatccacgttgcag 398  Q
    || ||||| |||| |||| ||||| ||||||    
T  32390532 attaatgattttgtcgtcgtccacattgcag 32390502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 167 - 397
Target Start/End: Original strand, 34873890 - 34874119
Alignment:
Q  167 ttctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttgg 266  Q
    ||||||||||||||    ||||||||| |||||||||||||| ||  |||||||||||         ||| ||||||||||||||||  ||||| ||||     
T  34873890 ttctaactcgtttttcagtttcccttttattgaaataagtgagttatacatctatttcatcttttc-tttcgtgatttcgtcgtcttaatgcgatgttgt 34873988  T
Q  267 tttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcc 366  Q
    ||| |||||| |||||||| | | |||||| |||||||||||||| |||| |||||    | |||| ||||||| ||||||||||||  |||||||||||    
T  34873989 tttattcgtcatctttgtgtggcgttgtttgtctttcttgtttctttcagatatttatccgattcaaattgtcatatcaacttcgatctagtgcagatcc 34874088  T
Q  367 aatcaatgactttgacgtcatccacgttgca 397  Q
    ||| |||||||||| |||| || ||||||||    
T  34874089 aatgaatgactttggcgtcgtcaacgttgca 34874119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 246 - 439
Target Start/End: Original strand, 37425131 - 37425319
Alignment:
Q  246 gtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatca 345  Q
    ||||||||  |||||||||| |||||| |||||||||||||||| |||||| || ||||||||||   |||||||||| |  ||| ||||||||||        
T  37425131 gtcgtctttgtgcgacgttgttttgtttgtcgtctttgtgcgacgttgtttgtcattcttgtttcgtacaggtatttgttcagtttagattgtcag---- 37425226  T
Q  346 acttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcat 439  Q
     ||| ||| ||||| ||||| ||||||||||||||  ||| || ||||||||||  | ||| ||||||||||||||||| |||||| |||||||    
T  37425227 -ctttgatccagtgtagatcaaatcaatgactttggagtcctcaacgttgcagattcggatgcatggttattccggagacttaaatatagtcat 37425319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 238 - 446
Target Start/End: Original strand, 13007791 - 13007998
Alignment:
Q  238 gtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattg 337  Q
    ||||||||||||||||  ||| |||||| ||| ||||||||||||||||||| |||||| ||||||||| ||| |||||||||||| | || ||| |||     
T  13007791 gtgatttcgtcgtcttagtgcaacgttgttttattcgtcgtctttgtgcgacgttgtttgtctttcttg-ttcgctcaggtatttgttcggatcaaatta 13007889  T
Q  338 tcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtc 437  Q
    ||| |||| |||  || ||| ||| ||||||||| |||||||  ||||||| |||||| ||| || ||  ||||| ||||||||||| || ||| | |||    
T  13007890 tcatatcagcttaaatccagggcatatccaatcattgacttttgcgtcatcaacgttgtagatccggagtcatgggtattccggagacttgaatattgtc 13007989  T
Q  438 atatgtgta 446  Q
    |||| ||||    
T  13007990 atatatgta 13007998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 238 - 447
Target Start/End: Complemental strand, 20146231 - 20146025
Alignment:
Q  238 gtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattg 337  Q
    ||||||| ||||||||  |||||||||| |||||| ||||||||||| || | |||||| ||||||   | |   |||||| |||| | ||||   ||||    
T  20146231 gtgattttgtcgtcttagtgcgacgttgttttgtttgtcgtctttgtacggcgttgtttgtctttcccctcttgttcaggtgtttgttcggtt---attg 20146135  T
Q  338 tcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtc 437  Q
    | |||||| |||||||  ||||||||||||||||||||||||| ||||||  |||||||||| |||||| ||||  ||||||| |||||| ||| |||||    
T  20146134 ttagatcagcttcgatctagtgcagatccaatcaatgactttggcgtcatgaacgttgcagatccagatgcatgtctattccgaagattttaatatagtc 20146035  T
Q  438 atatgtgtag 447  Q
    |||| |||||    
T  20146034 atatttgtag 20146025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 168 - 443
Target Start/End: Original strand, 41358069 - 41358333
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    |||||||||||||  | ||| ||||| |||||||||||| |||||||||||||||||         ||  ||||||| ||||||||  |||||| ||| |    
T  41358069 tctaactcgtttttctcttttccttttattgaaataagttattttcacatctatttcattttttccttc-gtgattttgtcgtcttagtgcgacattgtt 41358167  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    ||||||||||| |||||||| | |||||| ||||||||||||   | ||||||||| | ||||||||||||||||||          || ||||||| ||    
T  41358168 ttgttcgtcgtgtttgtgcggcgttgtttgtctttcttgttttaattaggtatttgttcggttcagattgtcagatc----------caatgcagattca 41358257  T
Q  368 atcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgt 443  Q
    |||||||||||||||||| || ||||| |||| ||  | |||| |||||||| || | || ||| |||||||||||    
T  41358258 atcaatgactttgacgtcgtcaacgttacagatccgaagacatagttattccagatactttaatatagtcatatgt 41358333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 260 - 441
Target Start/End: Original strand, 8957327 - 8957508
Alignment:
Q  260 acgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtg 359  Q
    |||||| |||||| || ||||||||||||| |||||| |||||  | | |   |||||| |||| |  |||||||||||||||||| ||||||| || ||    
T  8957327 acgttgttttgtttgttgtctttgtgcgacgttgtttgtcttttctctcttgttcaggtgtttgttcagttcagattgtcagatcagcttcgatccaatg 8957426  T
Q  360 cagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatat 441  Q
    ||||| ||| ||||||||||  ||||||| |||||||||| || || | |||| |||| ||||||||| ||| |||||||||    
T  8957427 cagattcaaccaatgacttttgcgtcatcaacgttgcagatccggagatatggctatttcggagattttaatatagtcatat 8957508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 238 - 395
Target Start/End: Original strand, 13079244 - 13079400
Alignment:
Q  238 gtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattg 337  Q
    ||||||||||||||||  ||| |||||| ||| |||||||||||||||||||||||||| ||||||||| |||  ||||||||||| | || ||| |||     
T  13079244 gtgatttcgtcgtcttagtgcaacgttgttttattcgtcgtctttgtgcgacattgtttgtctttcttg-ttcgttcaggtatttgttcggatcaaatta 13079342  T
Q  338 tcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttg 395  Q
    ||| |||| |||  || ||| ||| ||||||||| |||||||  ||||||| ||||||    
T  13079343 tcatatcagcttaaatccagggcatatccaatcattgacttttgcgtcatcaacgttg 13079400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 259 - 447
Target Start/End: Complemental strand, 28389103 - 28388914
Alignment:
Q  259 gacgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggt-atttgattggttcagattgtcagatcaacttcgattcag 357  Q
    ||||||||||| || |||||||||  ||| | |||||| || || |||||||| ||| || ||||| |  ||||||||||||| |||| ||| ||| |||    
T  28389103 gacgttggtttatttgtcgtctttacgcggcgttgtttgtcatttttgtttctttcaagtcatttgttcagttcagattgtcatatcagcttagatccag 28389004  T
Q  358 tgcagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    || ||||| ||||||||||||||  ||| |||| |||||||| ||||| | |||| ||||||||||| || ||| || ||||||||||||    
T  28389003 tgaagatcaaatcaatgactttggtgtcgtccatgttgcagatccagagatatgggtattccggagacttgaatataatcatatgtgtag 28388914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 274 - 375
Target Start/End: Complemental strand, 34893923 - 34893822
Alignment:
Q  274 gtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaat 373  Q
    |||||||||||||||| |||||| | ||||||||||| ||||| |||||||| |||||| |||||||||| ||||||| | ||||||| || ||||||||    
T  34893923 gtcgtctttgtgcgacgttgtttgtttttcttgtttccctcagctatttgatcggttcatattgtcagattaacttcgttccagtgcaaattcaatcaat 34893824  T
Q  374 ga 375  Q
    ||    
T  34893823 ga 34893822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 238 - 375
Target Start/End: Original strand, 41988251 - 41988388
Alignment:
Q  238 gtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattg 337  Q
    ||||||| ||||||||  |||||||||| |||||| |||||||||||||| | |||||| ||||| |||||||  | | ||||||| ||| ||||| |||    
T  41988251 gtgattttgtcgtcttagtgcgacgttgttttgtttgtcgtctttgtgcggctttgtttgtcttttttgtttcgtttaagtatttgtttgtttcaggttg 41988350  T
Q  338 tcagatcaacttcgattcagtgcagatccaatcaatga 375  Q
    ||| |||| |||| || |||||||||| ||||||||||    
T  41988351 tcatatcagcttcaatgcagtgcagattcaatcaatga 41988388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 275 - 447
Target Start/End: Original strand, 29154356 - 29154528
Alignment:
Q  275 tcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatg 374  Q
    ||||||||||||||  ||| || |||||||| ||||  | ||| ||||| | |||| ||||||||| ||   ||||||||||||||||||||||| ||||    
T  29154356 tcgtctttgtgcgatgttggttgtctttcttttttcgtttaggcatttgttcggtttagattgtcaaataggcttcgattcagtgcagatccaattaatg 29154455  T
Q  375 actttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    | ||||  |||||||| |||||||| || || |||||  ||||||||||| |||||| || || |||||||||    
T  29154456 attttggtgtcatccatgttgcagatccggagacatgagtattccggagagttaaatataatcgtatgtgtag 29154528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 262 - 447
Target Start/End: Original strand, 32387588 - 32387772
Alignment:
Q  262 gttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgca 361  Q
    |||| ||||||  ||||||||||||| | ||||||  |||||||||||   ||||||||||| | | |||| ||||||||| || |||||||  ||||||    
T  32387588 gttgatttgtttatcgtctttgtgcggcgttgtttgcctttcttgttttattcaggtatttgttcgattca-attgtcagaccagcttcgatctagtgca 32387686  T
Q  362 gatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    |||||||||||||| |||||| || | ||||||||||| || || |||| | | |||| || | || ||| |||||||||||||||    
T  32387687 gatccaatcaatgattttgacatcgttcacgttgcagatccggagacataggtgttccagatacttgaatatagtcatatgtgtag 32387772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 168 - 447
Target Start/End: Original strand, 34866457 - 34866739
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    |||||||||||||  | |||| |||| ||||||||||| || ||||| ||||||||||        ||| ||||||||||||||||  |||||||||  |    
T  34866457 tctaactcgtttttctctttctcttttattgaaataagcgagtttcatatctatttcgttttttc-tttcgtgatttcgtcgtcttagtgcgacgttatt 34866555  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcag----a 363  Q
    ||||||||||||||||| || | | |||| |||||||| ||||  |||| |||||| | | |||| ||||||| || | |||||||  |||||||    |    
T  34866556 ttgttcgtcgtctttgtacggcgtagtttatctttcttttttcattcagatatttgttcgattcaaattgtcatataagcttcgatctagtgcagatcca 34866655  T
Q  364 tccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    |||||||||| | ||||||||| || | |||||||| || || |||||  |||| |||||| || ||| | | |||||||||||    
T  34866656 tccaatcaataattttgacgtcgtcaatgttgcagatccggagacatgaatatttcggagacttgaatatggccatatgtgtag 34866739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 183 - 297
Target Start/End: Original strand, 37425041 - 37425154
Alignment:
Q  183 tatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtcttt 282  Q
    ||||||||||| ||||||||||||||||||||||||||| | |        ||| ||||||| ||||||||  |||||||||| |||||| |||||||||    
T  37425041 tatttcccttttattgaaataagtgattttcacatctatgttgttttttc-tttcgtgattttgtcgtctttgtgcgacgttgttttgtttgtcgtcttt 37425139  T
Q  283 gtgcgacattgtttt 297  Q
    ||||||| |||||||    
T  37425140 gtgcgacgttgtttt 37425154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 185 - 282
Target Start/End: Complemental strand, 28423870 - 28423774
Alignment:
Q  185 tttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtcttt 282  Q
    ||||||||| |||||||||| ||||||| | ||||||||||       ||||||||||||||||||| ||||| ||| ||||||||||||||||||||    
T  28423870 tttcccttttattgaaataaatgatttttatatctatttcgtttttt-attttgtgatttcgtcgtcatcttgtgacattggtttgttcgtcgtcttt 28423774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 329 - 447
Target Start/End: Complemental strand, 17325586 - 17325468
Alignment:
Q  329 ttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagattta 428  Q
    |||||||||||||||||||||| || | |||||||||||| ||||||||||| |||||||   ||| |||| || ||  ||||  |||||| |||||||     
T  17325586 ttcagattgtcagatcaacttcaatccggtgcagatccaaccaatgactttgtcgtcatcatagttacagatccggaggcatgactattccagagatttt 17325487  T
Q  429 aatgtagtcatatgtgtag 447  Q
    ||| ||||||||| |||||    
T  17325486 aatatagtcatatatgtag 17325468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 332 - 395
Target Start/End: Complemental strand, 12524585 - 12524522
Alignment:
Q  332 agattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttg 395  Q
    |||||||||||||||||| ||| ||||| ||||||||||||||||||||  |||||| ||||||    
T  12524585 agattgtcagatcaactttgatccagtgtagatccaatcaatgactttggtgtcatcaacgttg 12524522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 238 - 446
Target Start/End: Original strand, 13080252 - 13080461
Alignment:
Q  238 gtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctt--tgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagat 335  Q
    ||||||||||||||||  ||| |||||| ||| |||||||||||  |||||||| |||||| ||||||||| |||  ||||||||||| | || ||| ||    
T  13080252 gtgatttcgtcgtcttagtgcaacgttgttttattcgtcgtctttgtgtgcgacgttgtttgtctttcttg-ttcgttcaggtatttgttcggatcaaat 13080350  T
Q  336 tgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtag 435  Q
    | ||| |||| |||  || ||| ||| ||| ||||| |||||||  | ||||| |||||| ||| || ||  ||||| ||||||||||| || ||| | |    
T  13080351 tatcatatcagcttaaatccagggcatatcgaatcattgacttttgcatcatcaacgttgtagatccggagtcatgggtattccggagacttgaatattg 13080450  T
Q  436 tcatatgtgta 446  Q
    |||||| ||||    
T  13080451 tcatatatgta 13080461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 185 - 225
Target Start/End: Original strand, 28500764 - 28500804
Alignment:
Q  185 tttccctttaattgaaataagtgattttcacatctatttcg 225  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  28500764 tttcccttttattgaaataagtgattttcacatctatttcg 28500804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 370 - 441
Target Start/End: Complemental strand, 2555234 - 2555163
Alignment:
Q  370 caatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatat 441  Q
    ||||||||||||||||||| |||||||||| || || |||||  ||||||||||| || ||| |||||||||    
T  2555234 caatgactttgacgtcatcaacgttgcagatccggagacatgagtattccggagacttgaatatagtcatat 2555163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 168 - 223
Target Start/End: Original strand, 29154285 - 29154339
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctattt 223  Q
    ||||||| ||||| || |||| |||| |||||||||||||||||||||||||||||    
T  29154285 tctaacttgtttt-ttctttctcttttattgaaataagtgattttcacatctattt 29154339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 399
Target Start/End: Complemental strand, 42512881 - 42512844
Alignment:
Q  362 gatccaatcaatgactttgacgtcatccacgttgcaga 399  Q
    ||||||| ||||||||||||||||||| ||||||||||    
T  42512881 gatccaaacaatgactttgacgtcatcaacgttgcaga 42512844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 357 - 397
Target Start/End: Complemental strand, 24288842 - 24288802
Alignment:
Q  357 gtgcagatccaatcaatgactttgacgtcatccacgttgca 397  Q
    |||||| |||| ||||||||||||||||| |||||||||||    
T  24288842 gtgcagttccattcaatgactttgacgtcgtccacgttgca 24288802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 357 - 397
Target Start/End: Original strand, 24373380 - 24373420
Alignment:
Q  357 gtgcagatccaatcaatgactttgacgtcatccacgttgca 397  Q
    |||||| |||| ||||||||||||||||| |||||||||||    
T  24373380 gtgcagttccattcaatgactttgacgtcgtccacgttgca 24373420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 356 - 452
Target Start/End: Original strand, 25962136 - 25962232
Alignment:
Q  356 agtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtagtcata 452  Q
    ||||||||||  ||||||||||||  |||| || |||||| ||| || || |||||| ||||||||| | || ||| ||||||||| ||||| ||||    
T  25962136 agtgcagatctgatcaatgacttttgcgtcgtcaacgttgtagatccggagacatggatattccggaaacttgaatatagtcatatttgtaggcata 25962232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 170; Significance: 5e-91; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 168 - 447
Target Start/End: Complemental strand, 23843508 - 23843230
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    |||||||||||||  ||||||||||| ||| ||||||||||||||||||||| || ||       |||||||||||||||||||||| ||||||||||||    
T  23843508 tctaactcgtttttctatttcccttttattaaaataagtgattttcacatcttttacgtttttt-attttgtgatttcgtcgtcttcgtgcgacgttggt 23843410  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    |||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||| |||||||||| ||    
T  23843409 ttgttcgtcgtctttgtgcgacgttgtttgtctttcttgtttctcttaggtatttgatcggttcagattgtcagatcagcttcgatccagtgcagattca 23843310  T
Q  368 atcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||||||||||||| |||||||||||||||||| || || |||||| |||||||||||||||||| ||||||||| |||||    
T  23843309 atcaatgactttggcgtcatccacgttgcagatccggagacatggctattccggagatttaaatatagtcatatatgtag 23843230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 167 - 447
Target Start/End: Complemental strand, 13234193 - 13233914
Alignment:
Q  167 ttctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttgg 266  Q
    |||||| |||||||  | ||||||||| ||||||||||||||||||||||||||||| |       |||||||||||||||||||||| |||||||||||    
T  13234193 ttctaattcgtttttctttttcccttttattgaaataagtgattttcacatctattttgtttttt-attttgtgatttcgtcgtcttcgtgcgacgttgg 13234095  T
Q  267 tttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcc 366  Q
    ||||||||||||||||||||||| |||||| | |||||||||||||||||||||||||| |||||| ||||||||||||  ||||||  |||||||||||    
T  13234094 tttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcggttcaaattgtcagatcagtttcgatctagtgcagatcc 13233995  T
Q  367 aatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||||||||| |||| |||||||||||||||||| || || ||||||||||||||||||||||||| |||||||||||||||    
T  13233994 aatcaatgattttggcgtcatccacgttgcagatccggagacatggttattccggagatttaaatatagtcatatgtgtag 13233914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 168 - 447
Target Start/End: Complemental strand, 12576562 - 12576287
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    ||||||| |||||  |||||||||||||||||||||||||||||||||||||||||||       ||||||||||| |||||||||  || |||||||||    
T  12576562 tctaacttgtttttctatttccctttaattgaaataagtgattttcacatctatttcgtttt---attttgtgattccgtcgtctttgtgtgacgttggt 12576466  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    | |||||||||||||||||||| |||||| | || ||||||||||||||||||||||| | ||||||||||||||||| ||||||| |||||||||||||    
T  12576465 t-gttcgtcgtctttgtgcgacgttgtttgttttccttgtttctctcaggtatttgatcgcttcagattgtcagatcagcttcgatccagtgcagatcca 12576367  T
Q  368 atcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||||||||||||| |||||||||||||||||| || || ||||||||||||||||||||||||| |||||||||||||||    
T  12576366 atcaatgactttggcgtcatccacgttgcagatccggaaacatggttattccggagatttaaatatagtcatatgtgtag 12576287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 168 - 447
Target Start/End: Original strand, 20845038 - 20845316
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    |||||||||||||  | ||||||||| |||||||||||||||||||||||||||||||       |||||||||||| ||| ||||| |||||| |||||    
T  20845038 tctaactcgtttttctctttcccttttattgaaataagtgattttcacatctatttcgtttttt-attttgtgattttgtcatcttcgtgcgacattggt 20845136  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    ||||||||||||||||||||||  ||||| | ||||||||||||||||| |||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  20845137 ttgttcgtcgtctttgtgcgacgctgtttgtttttcttgtttctctcagatatttgatcggttcagattgtcagatcaacttcgatccagtgcagatcca 20845236  T
Q  368 atcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||||||||||| | |||||||||||||||| | ||||| |||||||||||||||| |||||||| ||||||||| |||||    
T  20845237 atcaatgacttcggcgtcatccacgttgcaaatccagaaacatggttattccggatatttaaatatagtcatatttgtag 20845316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 168 - 444
Target Start/End: Original strand, 19759818 - 19760093
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    |||||||||||||  ||||||||||| ||||||||||||||||||||||| | || ||       |||||||||||||||| |||||  |||||||||||    
T  19759818 tctaactcgtttttctatttcccttttattgaaataagtgattttcacatttgttacgtttttt-attttgtgatttcgtcatcttcgagcgacgttggt 19759916  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    |||||| ||||||||||||||| |||||| | |||||||||||||||| ||||||||| |||||||||||||||||||  |||||| |||||||||||||    
T  19759917 ttgttcatcgtctttgtgcgacgttgtttgtatttcttgtttctctcatgtatttgatcggttcagattgtcagatcagtttcgatccagtgcagatcca 19760016  T
Q  368 atcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtg 444  Q
    ||||||||||||| |||||||||||||||||| || || |||||| |||||||||||||||||| ||||||||||||    
T  19760017 atcaatgactttggcgtcatccacgttgcagatccggagacatggctattccggagatttaaatatagtcatatgtg 19760093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 172 - 438
Target Start/End: Original strand, 11425978 - 11426240
Alignment:
Q  172 actcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgt 271  Q
    |||||||||  |||||| |||| ||| |||||||||||||||||||||||||||       |||||||||||||||| ||||| ||||| ||||||| ||    
T  11425978 actcgtttttctatttctcttttatttaaataagtgattttcacatctatttcgtttt---attttgtgatttcgtcatcttcgtgcgatgttggtt-gt 11426073  T
Q  272 tcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatca 371  Q
    |||||||||||||||||| |||||| | ||||||||||||||||||||||||||   ||||||||||||||||| ||||||| |||||||||| ||||||    
T  11426074 tcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatctcttcagattgtcagatcagcttcgatccagtgcagattcaatca 11426173  T
Q  372 atgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtca 438  Q
    ||||||||| |||||||||||||| ||| ||  | ||||||||||||||||||||||||| ||||||    
T  11426174 atgactttggcgtcatccacgttgtagatccgaaaacatggttattccggagatttaaatatagtca 11426240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 168 - 447
Target Start/End: Complemental strand, 8633273 - 8633002
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    |||||||||||||  ||||| ||||| ||||||||||||||||||||||||||||| |       |||||||||||||||||| ||| ||||||||||||    
T  8633273 tctaactcgtttttgtattttccttttattgaaataagtgattttcacatctattttgtttt---attttgtgatttcgtcgttttcgtgcgacgttggt 8633177  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    | ||||||||||||||||||||   |||| | |||||||||||||||||||||| ||| | ||||||||||||||||| ||||||| ||  |||||||||    
T  8633176 t-gttcgtcgtctttgtgcgac---gtttgtttttcttgtttctctcaggtatt-gatcgcttcagattgtcagatcagcttcgatccaacgcagatcca 8633082  T
Q  368 atcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    |||||| |||||| |||||||||| ||||||| || || ||||||||||||||||||||||||| |||||||||||||||    
T  8633081 atcaattactttggcgtcatccacattgcagatccggaaacatggttattccggagatttaaatatagtcatatgtgtag 8633002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 168 - 428
Target Start/End: Original strand, 32457676 - 32457934
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    |||||||||||||  | ||||  ||| |||||||||||||| |||||||| ||||||        |||||||||||||||||||||| |||||||||| |    
T  32457676 tctaactcgtttttctctttcatttttattgaaataagtgactttcacatgtatttc-attttttattttgtgatttcgtcgtcttcgtgcgacgttgat 32457774  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  32457775 ttgttcgtcgtctttgtgcgacattgtttat-tttcttgtttctctcaggtatttgatcggttcagattgtcagaccaacttcgattcagtgcagatcca 32457873  T
Q  368 atcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagattta 428  Q
    ||| || || ||| ||||||||||||||||||  | |||||||| |||||| |||||||||    
T  32457874 atcgattacgttggcgtcatccacgttgcagattcggatacatgattattctggagattta 32457934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 185 - 447
Target Start/End: Original strand, 7049293 - 7049553
Alignment:
Q  185 tttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgt 284  Q
    ||||||||| |||||||||||||||||||| ||||||||          ||||||||||| ||| ||||| ||||||||||||||  || ||||||||||    
T  7049293 tttcccttttattgaaataagtgattttcatatctattt--gttttttgttttgtgattttgtcatcttcgtgcgacgttggtttcgtcatcgtctttgt 7049390  T
Q  285 gcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgt 384  Q
    | ||| |||||| | |||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| |    
T  7049391 gagacgttgtttgtttttcttgtttctctcaggtatttgatcggttcagattgtcagatcaacttcgatccagtgcagatgcaatcaatgactttgacat 7049490  T
Q  385 catccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||||||||||||||| || || | ||| |||||||| |||||||||| |||||||||||||||    
T  7049491 catccacgttgcagatccggagatatgattattccgaagatttaaatatagtcatatgtgtag 7049553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 168 - 447
Target Start/End: Original strand, 16913358 - 16913633
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    |||||||||||||    |||| |||| |||||||||||||||||||||||||||||||       |||||||||||||||||||||| ||||||||||||    
T  16913358 tctaactcgtttttcactttcactttcattgaaataagtgattttcacatctatttcgtttttt-attttgtgatttcgtcgtcttcgtgcgacgttggt 16913456  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    | |||| ||||| ||||||||| |||||| | ||||| |||||||||| |||||||||  ||||||||||||||||||  ||| || |||||||||||||    
T  16913457 t-gttcatcgtccttgtgcgacgttgtttgtttttct-gtttctctcatgtatttgatctgttcagattgtcagatcagtttcaatacagtgcagatcca 16913554  T
Q  368 atcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||||||||| ||| |||||||||||||||||| || || | ||| |||||||||| |||||||| |||||||||||||||    
T  16913555 atcaatgac-ttggcgtcatccacgttgcagatccggaaagatgattattccggatatttaaatatagtcatatgtgtag 16913633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 168 - 437
Target Start/End: Complemental strand, 548949 - 548682
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    |||||||||||||  | ||||||||| ||||||||||| ||||||||||||||||| |       ||||||||||||| |||||||| ||| | ||||||    
T  548949 tctaactcgtttttctttttcccttttattgaaataagcgattttcacatctattttgttttt--attttgtgatttcatcgtcttcgtgcaatgttggt 548852  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    ||||||||||||||  || ||| |||||| | |||||||||||| ||||||||||||| |||||||||||||| |||| |||||||  ||||||||||||    
T  548851 ttgttcgtcgtcttcatgtgacgttgtttctttttcttgtttctatcaggtatttgatcggttcagattgtcatatcagcttcgatctagtgcagatcca 548752  T
Q  368 atcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtc 437  Q
    |||||| |||||| ||||||||||| |||||| |  || ||||| ||||||||||||||||||| |||||    
T  548751 atcaattactttggcgtcatccacgctgcagatctggagacatgattattccggagatttaaatatagtc 548682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 168 - 447
Target Start/End: Original strand, 31747988 - 31748265
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    |||||||||||||  | ||||| |||||||||||||||| | ||||||||||||||||       |||||||||||||| ||||||| |||||| |||||    
T  31747988 tctaactcgtttttctctttccttttaattgaaataagt-actttcacatctatttcgtttttt-attttgtgatttcgacgtcttcgtgcgacattggt 31748085  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    || || |||||||||||||||| |||||| | |||||||||||||||| |||||||||  || ||||||||||||||| |||||||  ||||||||| ||    
T  31748086 ttctttgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcatgtatttgatcagtacagattgtcagatcagcttcgatcaagtgcagattca 31748185  T
Q  368 atcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    |||| ||||||   |||||||| ||||||| |  | || | |||||||||| |||||||||||| |||||||||||||||    
T  31748186 atcattgacttcagcgtcatcctcgttgcaaatacggagatatggttattctggagatttaaatatagtcatatgtgtag 31748265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 234 - 447
Target Start/End: Original strand, 10744678 - 10744890
Alignment:
Q  234 ttttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcag 333  Q
    ||||||||||||||||||||  |||||| ||| ||||||||||||||||||||||| ||||||  |||||||| |||  | ||||||||| | |||||||    
T  10744678 ttttgtgatttcgtcgtcttagtgcgaccttgttttgttcgtcgtctttgtgcgacgttgtttgcctttcttggttcgtttaggtatttgttcggttcag 10744777  T
Q  334 attgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgt 433  Q
    |||||||||||| ||||||| | ||||| ||| ||| ||||||||||  ||| || |||||||| | || || ||| || ||||||||||| |||||| |    
T  10744778 attgtcagatcagcttcgatccggtgca-atcaaattaatgactttggagtcgtcaacgttgcaaatccggagacaagggtattccggagacttaaatat 10744876  T
Q  434 agtcatatgtgtag 447  Q
    ||||||||||||||    
T  10744877 agtcatatgtgtag 10744890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 188 - 447
Target Start/End: Original strand, 32804345 - 32804603
Alignment:
Q  188 ccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcg 287  Q
    |||||| ||||||||||||||||||||||||| ||| |       ||||||||||||| |||||||  || || |||||||||||| ||||||||||  |    
T  32804345 cccttttattgaaataagtgattttcacatcttttttgtttttt-attttgtgatttcatcgtcttagtgagatgttggtttgttcctcgtctttgtatg 32804443  T
Q  288 acattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcat 387  Q
     | |||||| |||||||||||||  ||| ||||||| ||| |||||||||| ||||||||||||||  |||||||||||||||||||||||||  ||| |    
T  32804444 gcgttgtttgtctttcttgtttcgttcatgtatttgtttgattcagattgtgagatcaacttcgatcaagtgcagatccaatcaatgactttggtgtcgt 32804543  T
Q  388 ccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||| |||| |||  | || |||||  |||||| |||| || ||| |||| ||||||||||    
T  32804544 ccatgttgtagattcggagacatgaatattccagagacttgaatatagttatatgtgtag 32804603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 185 - 394
Target Start/End: Original strand, 8644292 - 8644500
Alignment:
Q  185 tttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgt 284  Q
    ||||||||| ||||||||||||| |||||||||||||||||        ||||||||||| ||| ||||  |||||| |||   |||| |||||||||||    
T  8644292 tttcccttttattgaaataagtgtttttcacatctatttcgttttttc-ttttgtgattttgtcatcttagtgcgacattgtgctgttggtcgtctttgt 8644390  T
Q  285 gcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgt 384  Q
    ||| | ||| || ||||||||||||   ||||||||||| ||||||||||||||| ||||||||| ||| || ||||||| ||||||||||||||| |||    
T  8644391 gcggcgttgcttgtctttcttgttttgttcaggtatttgtttggttcagattgtctgatcaacttagatccattgcagattcaatcaatgactttggcgt 8644490  T
Q  385 catccacgtt 394  Q
    | || |||||    
T  8644491 cgtcaacgtt 8644500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 168 - 380
Target Start/End: Complemental strand, 4663904 - 4663693
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    |||||| ||||||  | |||| |||| ||| |||||||||||||||||| ||||||||        ||| ||||||||||||||||  |||||||||  |    
T  4663904 tctaacacgtttttatgtttctcttttattaaaataagtgattttcacaactatttcgttgttttcttt-gtgatttcgtcgtcttagtgcgacgttatt 4663806  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    ||||||||| |||||||||||| |||||||| ||| |||||||  ||||||||||| ||||||| |||||||| ||||  | |||| ||||||| ||| |    
T  4663805 ttgttcgtcatctttgtgcgactttgtttttttttattgtttcgttcaggtatttgtttggttctgattgtcatatcagttacgatccagtgcatatcaa 4663706  T
Q  368 atcaatgactttg 380  Q
    |||||||||||||    
T  4663705 atcaatgactttg 4663693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 168 - 397
Target Start/End: Original strand, 1944126 - 1944354
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    |||||||||||||  | ||||||| | ||||||||||||||||||  ||| ||||| |       |||||||||||| |||||||   | | ||||||||    
T  1944126 tctaactcgtttttctctttccctcttattgaaataagtgatttttgcatttattttgtttttt-attttgtgattttgtcgtctaagtacaacgttggt 1944224  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    ||||  |||||||||||||| | |||||| |||||||||| ||  ||||||| ||| |||||||| ||||||| |||| ||||||| || ||| ||||||    
T  1944225 ttgtctgtcgtctttgtgcggcgttgtttgtctttcttgtgtcgttcaggtaattgtttggttcaaattgtcatatcagcttcgatccaatgcggatcca 1944324  T
Q  368 atcaatgactttgacgtcatccacgttgca 397  Q
    |||||| | |||| |||| |||||||||||    
T  1944325 atcaataattttggcgtcgtccacgttgca 1944354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 195 - 447
Target Start/End: Complemental strand, 12652257 - 12652007
Alignment:
Q  195 attgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt---ttgttcgtcgtctttgtgcgacat 291  Q
    |||||||||||||||||||||||||||||||        ||| || ||||| ||||||| ||||||||||| |   ||||||||||| ||| |||||  |    
T  12652257 attgaaataagtgattttcacatctatttcgccttttc-tttcgttatttcatcgtcttattgcgacgttgttgttttgttcgtcgtatttctgcgatgt 12652159  T
Q  292 tgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccac 391  Q
    |||||||||||||||||||  ||| ||||||| | ||||  ||||||||||||||||| |||| |||||||    ||| |||||||||| |||| || ||    
T  12652158 tgtttttctttcttgtttcgttcatgtatttgttcggttaggattgtcagatcaacttagatttagtgcag----aataaatgactttggcgtcgtcaac 12652063  T
Q  392 gttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    |||||||| ||    || | | ||||||||||| || ||| |||||||||||||||    
T  12652062 gttgcagatccgacgacttaggtattccggagacttgaatatagtcatatgtgtag 12652007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 278 - 447
Target Start/End: Original strand, 20496332 - 20496501
Alignment:
Q  278 tctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgact 377  Q
    ||||||| |||| |||||| ||||| ||||||   ||||||||||| | ||||||||||||||||||| ||| ||| ||||||| |||||||||||||||    
T  20496332 tctttgtacgactttgtttgtcttttttgttttgttcaggtatttgttcggttcagattgtcagatcagcttagatccagtgcaaatccaatcaatgact 20496431  T
Q  378 ttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    |||  ||| || |||||||| | |  || | |||| ||||||||||| || ||| |||||||||||||||    
T  20496432 ttggtgtcgtcaacgttgcatatcttgagagatgggtattccggagacttgaatatagtcatatgtgtag 20496501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 189 - 447
Target Start/End: Original strand, 5544759 - 5545015
Alignment:
Q  189 cctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcga 288  Q
    ||||| ||||||||||||||| || |||| |||||||       ||||||| ||||| ||||| |  ||||| |||| ||||||||||||||||||| ||    
T  5544759 ccttttattgaaataagtgatatttacatatatttcgttttt--attttgttatttcatcgtcctagtgcgatgttgatttgttcgtcgtctttgtgtga 5544856  T
Q  289 cattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatc 388  Q
    | |||||| |||||||| ||||  |||||| |||| |||||||||| ||||| ||||  |||||| | ||||| |||||||||| |||||||  ||  |     
T  5544857 cgttgtttgtctttcttatttcgttcaggtgtttgtttggttcagaatgtcatatcagattcgatcctgtgcatatccaatcaacgactttggtgttttt 5544956  T
Q  389 cacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||||||||||| | ||| |||||| |||| || | | || ||| ||||||| |||||||    
T  5544957 cacgttgcagatctagagacatgggtatttcgaaaacttgaatctagtcatttgtgtag 5545015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 233 - 310
Target Start/End: Complemental strand, 5417218 - 5417141
Alignment:
Q  233 attttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttc 310  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||||| | |||||| |||||||||||||    
T  5417218 attttgtgatttcgtcgtctttgtgcgacgttggtttgttcgtcgtctttgtgcggcgttgtttctctttcttgtttc 5417141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 266 - 399
Target Start/End: Complemental strand, 15128116 - 15127983
Alignment:
Q  266 gtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatc 365  Q
    |||| ||||||||||||||||||  |||||| |||||||| ||||  ||| ||||||| |  |||||||||||||  ||||||||||| || ||||||||    
T  15128116 gtttattcgtcgtctttgtgcgatgttgtttgtctttcttctttcattcaagtatttgttctgttcagattgtcaattcaacttcgatccactgcagatc 15128017  T
Q  366 caatcaatgactttgacgtcatccacgttgcaga 399  Q
     |||||||||||||| |||  |||||||||||||    
T  15128016 aaatcaatgactttggcgttgtccacgttgcaga 15127983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 347 - 446
Target Start/End: Complemental strand, 5417130 - 5417031
Alignment:
Q  347 cttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgta 446  Q
    ||||||| |||||||||||||||||| |||||||  ||| ||||||||||||| |||||||||||| |||| |||||| || ||| ||||||||||||||    
T  5417130 cttcgatgcagtgcagatccaatcaaagactttggtgtcgtccacgttgcagatccagatacatgggtatttcggagacttgaatatagtcatatgtgta 5417031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 271 - 380
Target Start/End: Original strand, 31804352 - 31804461
Alignment:
Q  271 ttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaatc 370  Q
    ||||||||||| |||||||||||||| ||||||||||||| |||| ||||||| |   |||||||||||||||||  ||||||  |||||||||| |||     
T  31804352 ttcgtcgtcttagtgcgacattgtttgtctttcttgtttcgctcaagtatttgctcaattcagattgtcagatcagattcgatctagtgcagatcaaatg 31804451  T
Q  371 aatgactttg 380  Q
    ||||||||||    
T  31804452 aatgactttg 31804461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 233 - 287
Target Start/End: Complemental strand, 15128173 - 15128119
Alignment:
Q  233 attttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcg 287  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  15128173 attttgtgatttcgtcgtcttagtgcgacgttggtttgttcgtcgtctttgtgcg 15128119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 234 - 439
Target Start/End: Complemental strand, 33541548 - 33541345
Alignment:
Q  234 ttttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttcttt---cttgtttctctcaggtatttgattggtt 330  Q
    ||||||||||| ||||||||  || |||| || |||||| |||||||||||||||  |||||| |||||   ||||||     ||||| |||| | | ||    
T  33541548 ttttgtgattttgtcgtcttagtgtgacgctgttttgtttgtcgtctttgtgcgatgttgtttgtcttttcccttgtt-----caggtgtttgttagatt 33541454  T
Q  331 cagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaa 430  Q
    |||||||| |||||| ||||| | |||||||||||||| |||||||||||  |||||| ||||| ||||    ||| ||||||| ||||| |||||| ||    
T  33541453 cagattgttagatcagcttcgttccagtgcagatccaaccaatgactttggtgtcatcaacgtttcagatttggatgcatggttgttccgaagattttaa 33541354  T
Q  431 tgtagtcat 439  Q
    | |||||||    
T  33541353 tatagtcat 33541345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 233 - 345
Target Start/End: Original strand, 33194699 - 33194811
Alignment:
Q  233 attttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttca 332  Q
    |||||||||||||||||| ||  || || |||||||||||||||||  ||| |||   |||||| |||||||| ||||  || |||||||| | ||||||    
T  33194699 attttgtgatttcgtcgtgttagtgtgatgttggtttgttcgtcgtacttgagcgttgttgtttgtctttcttatttccttcgggtatttgttcggttca 33194798  T
Q  333 gattgtcagatca 345  Q
    |||||||||||||    
T  33194799 gattgtcagatca 33194811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 334 - 441
Target Start/End: Complemental strand, 8694196 - 8694089
Alignment:
Q  334 attgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgt 433  Q
    ||||||||| |||||| |||  || |||||||||||||||||||||| |||| || | |||| ||| | |||| |||||||||||||||||  | ||| |    
T  8694196 attgtcagaccaactttgatctagagcagatccaatcaatgactttggcgtcctcaatgttgtagatctagatgcatggttattccggagacatgaatat 8694097  T
Q  434 agtcatat 441  Q
    ||||||||    
T  8694096 agtcatat 8694089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 238 - 380
Target Start/End: Original strand, 22530379 - 22530520
Alignment:
Q  238 gtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattg 337  Q
    ||||||||| ||||||  || ||||||  ||||||| || |||||||||||  |||||| |||||||| ||| | | || |||||| | | ||  ||| |    
T  22530379 gtgatttcgacgtcttagtgagacgttattttgttcatcatctttgtgcgatgttgtttgtctttcttttttgtttaag-tatttgttcgattttgatgg 22530477  T
Q  338 tcagatcaacttcgattcagtgcagatccaatcaatgactttg 380  Q
    |||||||||||||||| ||||||||||||||| ||| ||||||    
T  22530478 tcagatcaacttcgatccagtgcagatccaatgaatcactttg 22530520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 337 - 446
Target Start/End: Original strand, 892482 - 892591
Alignment:
Q  337 gtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagt 436  Q
    ||||||||  ||||||  |||||||||||||||||||||||||| |||  ||||||||||| |  | || |||||  ||| ||||||| || ||| ||||    
T  892482 gtcagatctgcttcgacccagtgcagatccaatcaatgactttggcgttgtccacgttgcaaattcggagacatgagtatcccggagacttgaatatagt 892581  T
Q  437 catatgtgta 446  Q
    ||||||||||    
T  892582 catatgtgta 892591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 257 - 370
Target Start/End: Original strand, 904386 - 904499
Alignment:
Q  257 gcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattca 356  Q
    ||||| || ||||||||| |||||||||| ||| |||||| ||||||||||||   |||  ||| || | |||||||| |||||||||| ||||||| ||    
T  904386 gcgacattagtttgttcgccgtctttgtgtgacgttgtttgtctttcttgttttgttcaactatatgttcggttcagactgtcagatcagcttcgatcca 904485  T
Q  357 gtgcagatccaatc 370  Q
     |||| ||||||||    
T  904486 atgcatatccaatc 904499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 242 - 397
Target Start/End: Original strand, 34020708 - 34020861
Alignment:
Q  242 tttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcag 341  Q
    ||||||||||||  ||||||| || |||||| ||||||||||| |||| |||||| | |||| | ||  ||  |||| |||| |  | ||||||||||||    
T  34020708 tttcgtcgtcttagtgcgacgctgttttgtttgtcgtctttgtacgacgttgtttgtttttcctcttgttc--aggtgtttgttcagatcagattgtcag 34020805  T
Q  342 atcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgca 397  Q
    |||| | |||||  |||| |||||||| ||||||||||| ||| ||| ||||||||    
T  34020806 atcagcctcgatctagtgtagatccaaccaatgactttggcgtaatcaacgttgca 34020861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 368 - 455
Target Start/End: Complemental strand, 12654195 - 12654108
Alignment:
Q  368 atcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtagtcatatgt 455  Q
    ||||||||||||| ||||||| ||||||||||  | || |||||  ||||||||||| || ||| ||||||||| ||||| |||||||    
T  12654195 atcaatgactttggcgtcatcaacgttgcagattcggagacatgagtattccggagacttgaatatagtcatatttgtaggcatatgt 12654108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 296
Target Start/End: Original strand, 1523363 - 1523420
Alignment:
Q  238 gtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgttt 296  Q
    ||||||||||||||||  ||||||||||  |||||||||||| ||||||||||||||||    
T  1523363 gtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtc-ttgtgcgacattgttt 1523420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 185 - 223
Target Start/End: Complemental strand, 20745111 - 20745073
Alignment:
Q  185 tttccctttaattgaaataagtgattttcacatctattt 223  Q
    ||||||||| |||||||||| ||||||||||||||||||    
T  20745111 tttcccttttattgaaataaatgattttcacatctattt 20745073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 195 - 225
Target Start/End: Original strand, 31804305 - 31804335
Alignment:
Q  195 attgaaataagtgattttcacatctatttcg 225  Q
    |||||||||||||||||||||||||||||||    
T  31804305 attgaaataagtgattttcacatctatttcg 31804335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 239 - 287
Target Start/End: Original strand, 32574536 - 32574584
Alignment:
Q  239 tgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcg 287  Q
    |||||||||||||||  ||||| |||||||||||| |||| ||||||||    
T  32574536 tgatttcgtcgtcttaatgcgatgttggtttgttcatcgtatttgtgcg 32574584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0722 (Bit Score: 168; Significance: 8e-90; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 168; E-Value: 8e-90
Query Start/End: Original strand, 170 - 447
Target Start/End: Complemental strand, 5608 - 5332
Alignment:
Q  170 taactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggttt 269  Q
    |||||||||||  |||||| |||| ||||||||||||||||||||||||| ||  |       |||||||||||||||||||||| ||||||||||||||    
T  5608 taactcgtttttctatttctcttttattgaaataagtgattttcacatctgttatgtttttt-attttgtgatttcgtcgtcttcgtgcgacgttggttt 5510  T
Q  270 gttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatccaat 369  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||||||||| |||||| ||||||| |||| ||||||| |||||||||||||||    
T  5509 gttcgtcgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcatattgtcatatcagcttcgatccagtgcagatccaat 5410  T
Q  370 caatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||||||||||| |||||||||||||||||| || || |||||| |||||||||||||||||| |||||||||||||||    
T  5409 caatgactttggcgtcatccacgttgcagatccggagacatggctattccggagatttaaatatagtcatatgtgtag 5332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 156; Significance: 1e-82; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 167 - 447
Target Start/End: Original strand, 36558 - 36832
Alignment:
Q  167 ttctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttgg 266  Q
    ||||||||||||||    ||||||||| |||||||||||||||||||||||||||||         |||||||||||||||||||||| |||||||||||    
T  36558 ttctaactcgtttttccttttcccttttattgaaataagtgattttcacatctatttt-attttttattttgtgatttcgtcgtcttcgtgcgacgttgg 36656  T
Q  267 tttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcc 366  Q
    ||||||||||||||||||||||| || |||||     ||||||||||||||||||||||  |||||||||||||||||| ||||||| ||||||||||||    
T  36657 tttgttcgtcgtctttgtgcgacgtttttttt-----ttgtttctctcaggtatttgatcagttcagattgtcagatcagcttcgatccagtgcagatcc 36751  T
Q  367 aatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    |||||||||||||| |||||||||||||||||| || |||||| |||||||| |||||||||||| |||||||||||||||    
T  36752 aatcaatgactttggcgtcatccacgttgcagatccggatacagggttattctggagatttaaatatagtcatatgtgtag 36832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 136; Significance: 9e-71; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 168 - 429
Target Start/End: Original strand, 244666 - 244926
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    |||||||||||||  | ||| | ||| |||||||||||||||||||||||||||||||       | |||||||||| ||||||||| |||||| |||||    
T  244666 tctaactcgtttttctcttttctttttattgaaataagtgattttcacatctatttcgtttttt-agtttgtgattttgtcgtcttcgtgcgaccttggt 244764  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    |||||||||||||||||||||| |||||| | |||||||||||||||||||||||||  ||||||||||||||||||| ||||||| |||||||||||||    
T  244765 ttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgaccggttcagattgtcagatcagcttcgatccagtgcagatcca 244864  T
Q  368 atcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaa 429  Q
    ||||||||||||| |||||||||||||| |||  | || | ||| |||||||||||||||||    
T  244865 atcaatgactttggcgtcatccacgttgtagattcggagatatgattattccggagatttaa 244926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 121; Significance: 8e-62; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 168 - 447
Target Start/End: Complemental strand, 9732 - 9464
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    |||||||||||||  ||||||||||| |||||| ||||||||||||||||||||||||          ||||||||||||||||||| | ||||||||||    
T  9732 tctaactcgtttttctatttcccttttattgaattaagtgattttcacatctatttcg----------ttgtgatttcgtcgtcttcgtacgacgttggt 9643  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    | ||||||| |||||||||||| || ||| | || ||||||||||| |||||||| ||   || ||||| ||| |||| ||||||| |||||||||| ||    
T  9642 t-gttcgtcttctttgtgcgacgttttttgttttccttgtttctcttaggtatttaatcactttagattatcatatcagcttcgatccagtgcagattca 9544  T
Q  368 atcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    ||||||||||||| |||||||||||||||||| || || |||||||||||||| |||||||||| |||||||||||||||    
T  9543 atcaatgactttggcgtcatccacgttgcagatccggaaacatggttattccgaagatttaaatatagtcatatgtgtag 9464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665 (Bit Score: 119; Significance: 1e-60; HSPs: 1)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 233 - 399
Target Start/End: Complemental strand, 1147 - 981
Alignment:
Q  233 attttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttca 332  Q
    |||||||||||||||| ||||| || ||||||||||||||||| |||||| ||||| ||||||| | |||||||||||||||||||||||||| ||||||    
T  1147 attttgtgatttcgtcatcttcgtgtgacgttggtttgttcgttgtctttttgcgaaattgtttgtttttcttgtttctctcaggtatttgatcggttca 1048  T
Q  333 gattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcaga 399  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  1047 gattgtcagatcagcttcgatccagtgcagatccaatcaatgactttggcgtcatccacgttgcaga 981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 110; Significance: 3e-55; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 168 - 399
Target Start/End: Complemental strand, 1225 - 995
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    |||||||||||||  | ||||||||| ||||||||||||||||||||||||||||| |       |||||||||||||||||||||  ||||||||||||    
T  1225 tctaactcgtttttctctttcccttttattgaaataagtgattttcacatctattttgtttttt-attttgtgatttcgtcgtcttagtgcgacgttggt 1127  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    ||||||||||| |||||||||  ||| || |||||||||| ||  ||||||||||| |||||||| ||||||||||||||||||||  ||||||||||||    
T  1126 ttgttcgtcgtatttgtgcgaagttgattgtctttcttgtatcgttcaggtatttgtttggttcaaattgtcagatcaacttcgatctagtgcagatcca 1027  T
Q  368 atcaatgactttgacgtcatccacgttgcaga 399  Q
    ||||||||| ||  |||| |||| ||||||||    
T  1026 atcaatgacattagcgtcgtccatgttgcaga 995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 105; Significance: 3e-52; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 168 - 427
Target Start/End: Original strand, 11049 - 11302
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    |||||||| ||||  | ||||||| | |||||||||||||||||||||| |||||  |       |||||||||||||||    ||| ||||||||||||    
T  11049 tctaactcatttttctttttccctcttattgaaataagtgattttcacagctattctgttttt--attttgtgatttcgt----ttcgtgcgacgttggt 11142  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatcca 367  Q
    ||||||| ||||||| |||||| |||||| | |||||||||||||||||||||||||| | || ||||||||| |||| ||| |||  |||||| |||||    
T  11143 ttgttcgccgtctttatgcgacgttgtttgtttttcttgtttctctcaggtatttgatcgatttagattgtcaaatcagcttggatctagtgcatatcca 11242  T
Q  368 atcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagattt 427  Q
    |||||||||||||||||||||||||||||||| || || ||||||||||||| |||||||    
T  11243 atcaatgactttgacgtcatccacgttgcagatccggagacatggttattccagagattt 11302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 86; Significance: 6e-41; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 168 - 447
Target Start/End: Complemental strand, 11861 - 11582
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttggt 267  Q
    |||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||        ||| |||||||| |||||||  ||||| |||| |    
T  11861 tctaactcgtttttctatttcccttttattgaaataagtgattttcacatctatttcgtttttc--tttcgtgatttcatcgtcttagtgcgaagttgtt 11764  T
Q  268 ttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctc--tcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatc 365  Q
    |||   |||| ||||||||||| || ||| ||||| || ||| ||  ||| ||||||| |   |||||||||||| |||| ||||||| |||||||||||    
T  11763 ttgcctgtcgactttgtgcgacgttatttgtcttttttttttttcgttcatgtatttgttcaattcagattgtcaaatcagcttcgatccagtgcagatc 11664  T
Q  366 caatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
     ||||||||| ||||  ||| || |||||||||| ||||| |||||| ||||| ||||| |||||| |||||||||||||||    
T  11663 aaatcaatgattttggagtcgtcaacgttgcagatccagaaacatgggtattctggagacttaaatatagtcatatgtgtag 11582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 79; Significance: 1e-36; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 167 - 442
Target Start/End: Complemental strand, 137144 - 136885
Alignment:
Q  167 ttctaactcgttttgt-tatttccctttaattgaaataagtgattttcacatctatttcgnnnnnnnattttgtgatttcgtcgtcttcttgcgacgttg 265  Q
    ||||||||| |||| | ||||||||||| | |||||||||||||||| ||||||||||||        ||||||||||||||||||||  | ||||||||    
T  137144 ttctaactcattttttctatttcccttttaatgaaataagtgattttaacatctatttcgttttttc-ttttgtgatttcgtcgtcttagtacgacgttg 137046  T
Q  266 gtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttcagattgtcagatcaacttcgattcagtgcagatc 365  Q
     ||||||| ||||||||||||||| |||||| | ||||||||||                ||| ||||||||||||||||||||||||  ||||||||||    
T  137045 ttttgttcatcgtctttgtgcgacgttgtttgtttttcttgttt----------------tggctcagattgtcagatcaacttcgatcaagtgcagatc 136962  T
Q  366 caatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatg 442  Q
     |||||| |||||||  ||| || |||||||||| ||||| |||||| ||||||||||| |||||| ||||||||||    
T  136961 aaatcaacgactttggagtcgtcaacgttgcagatccagagacatgggtattccggagacttaaatatagtcatatg 136885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1294 (Bit Score: 61; Significance: 5e-26; HSPs: 2)
Name: scaffold1294
Description:

Target: scaffold1294; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 324 - 447
Target Start/End: Original strand, 959 - 1083
Alignment:
Q  324 attggttcagattgtcagatcaacttcgatt-cagtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccgga 422  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| || | |||||| | ||  |||||||| |||||||      
T  959 attggttcagattgtcagatcaacttcgatttcagtgcacatccaatcaatgactttgacgtcgtcaatgttgcatatccgcatacatgggtattccgat 1058  T
Q  423 gatttaaatgtagtcatatgtgtag 447  Q
    || || ||| |||||||||||||||    
T  1059 gacttgaatatagtcatatgtgtag 1083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1294; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 168 - 225
Target Start/End: Original strand, 810 - 867
Alignment:
Q  168 tctaactcgttttgttatttccctttaattgaaataagtgattttcacatctatttcg 225  Q
    |||||||||||||  | ||||||||| |||||||||||||  ||||||||||||||||    
T  810 tctaactcgttttcctctttcccttttattgaaataagtggctttcacatctatttcg 867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0627 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0627
Description:

Target: scaffold0627; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 233 - 399
Target Start/End: Complemental strand, 6805 - 6641
Alignment:
Q  233 attttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttctctcaggtatttgattggttca 332  Q
    |||||||||||| || |||||  ||| |||||||||||||||||||||  ||||| | || ||| |||||||||||||  ||||| ||||||| |||| |    
T  6805 attttgtgattttgttgtcttagtgcaacgttggtttgttcgtcgtct--gtgcggcgttatttgtctttcttgtttcgttcaggcatttgatcggttta 6708  T
Q  333 gattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcaga 399  Q
    |||||||||||||||||||||  | || | ||||||||||  |||| | |||||||||| |||||||    
T  6707 gattgtcagatcaacttcgatcaactgaaaatccaatcaacaacttcggcgtcatccacattgcaga 6641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 233 - 380
Target Start/End: Complemental strand, 10331 - 10184
Alignment:
Q  233 attttgtgatttcgtcgtcttcttgcgacgttggtttgttcgtcgtctttgtgcgacattgtttttctttcttgtttc-tctcaggtatttgattggttc 331  Q
    |||||||||||| || |||||  |||||||||||||||||||||||||||||||    |||||| ||||||||||||| ||| ||||||||| |||| ||    
T  10331 attttgtgatttggttgtcttagtgcgacgttggtttgttcgtcgtctttgtgcattgttgtttgtctttcttgtttcgtct-aggtatttgtttggatc 10233  T
Q  332 agattgtcagatcaacttcgattcagtgcagatccaatcaatgactttg 380  Q
    | |||||||||| | ||| ||| || || ||||||||||||||| ||||    
T  10232 aaattgtcagattagctttgatccaatggagatccaatcaatgattttg 10184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 329 - 447
Target Start/End: Complemental strand, 25436 - 25318
Alignment:
Q  329 ttcagattgtcagatcaacttcgattcagtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagattta 428  Q
    ||||||||||||||| | ||| ||| || ||||||||||| |||||| |||| ||||||| |||||||||| ||  |  ||||| ||||||||||||||     
T  25436 ttcagattgtcagattagctttgatccaatgcagatccaaccaatgattttggcgtcatcaacgttgcagatccgaaggcatggctattccggagatttt 25337  T
Q  429 aatgtagtcatatgtgtag 447  Q
    ||| ||||||||| |||||    
T  25336 aatatagtcatatttgtag 25318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 363 - 447
Target Start/End: Original strand, 105264 - 105348
Alignment:
Q  363 atccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtag 447  Q
    |||||| ||||||||||| ||||||| |||||||||| || ||  ||||| |||| ||||||||| ||| ||||||||| |||||    
T  105264 atccaaccaatgactttggcgtcatcaacgttgcagatccggaggcatggctatttcggagattttaatatagtcatatttgtag 105348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0999 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0999
Description:

Target: scaffold0999; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 356 - 424
Target Start/End: Original strand, 1921 - 1989
Alignment:
Q  356 agtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggaga 424  Q
    ||||||||||| ||||||||||||| ||||||| |||||||||| | ||| ||||   |||||||||||    
T  1921 agtgcagatccgatcaatgactttggcgtcatcaacgttgcagatcgagagacataagtattccggaga 1989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 356 - 441
Target Start/End: Complemental strand, 2340 - 2255
Alignment:
Q  356 agtgcagatccaatcaatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatat 441  Q
    ||||||||||| ||||||||||||| |||| || | |||||||| || || |||||  ||||| ||||| || ||| |||||||||    
T  2340 agtgcagatccgatcaatgactttggcgtcgtcaatgttgcagatccggagacatgagtattctggagacttgaatatagtcatat 2255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 455
Target Start/End: Original strand, 35321 - 35406
Alignment:
Q  370 caatgactttgacgtcatccacgttgcagacccagatacatggttattccggagatttaaatgtagtcatatgtgtagtcatatgt 455  Q
    ||||||||||| |||| || |||||||||| || ||||||||  ||||||||||| || ||| | ||||||| | ||| |||||||    
T  35321 caatgactttggcgtcgtcaacgttgcagatccggatacatgagtattccggagacttgaatattgtcatatttataggcatatgt 35406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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