View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5228-Insertion-15 (Length: 310)

Name: NF5228-Insertion-15
Description: NF5228
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5228-Insertion-15
NF5228-Insertion-15
[»] chr7 (5 HSPs)
chr7 (8-292)||(5827761-5828052)
chr7 (28-260)||(47679664-47679897)
chr7 (29-235)||(19277739-19277946)
chr7 (71-211)||(4175775-4175913)
chr7 (144-227)||(32585726-32585809)
[»] chr5 (5 HSPs)
chr5 (39-227)||(27337272-27337460)
chr5 (39-291)||(433800-434060)
chr5 (28-292)||(15291352-15291623)
chr5 (28-177)||(6821533-6821682)
chr5 (159-211)||(6534023-6534075)
[»] chr6 (7 HSPs)
chr6 (28-227)||(34305076-34305275)
chr6 (28-227)||(10402308-10402506)
chr6 (39-227)||(32120507-32120694)
chr6 (40-227)||(32116214-32116400)
chr6 (99-235)||(45090-45227)
chr6 (97-260)||(29337483-29337650)
chr6 (115-210)||(7199990-7200084)
[»] chr2 (11 HSPs)
chr2 (29-292)||(9684744-9685015)
chr2 (39-294)||(28225505-28225762)
chr2 (45-292)||(18744364-18744618)
chr2 (29-260)||(20142075-20142304)
chr2 (29-292)||(41867238-41867508)
chr2 (39-288)||(19161168-19161422)
chr2 (81-227)||(17345217-17345363)
chr2 (42-203)||(8588688-8588849)
chr2 (79-200)||(34185439-34185560)
chr2 (71-141)||(33611937-33612006)
chr2 (179-240)||(44686982-44687044)
[»] chr8 (11 HSPs)
chr8 (28-260)||(24125570-24125805)
chr8 (29-245)||(37517649-37517866)
chr8 (28-246)||(25021131-25021350)
chr8 (113-224)||(500809-500920)
chr8 (52-174)||(10950552-10950674)
chr8 (52-174)||(10958557-10958679)
chr8 (156-200)||(10190150-10190194)
chr8 (80-210)||(139898-140027)
chr8 (39-102)||(4700344-4700407)
chr8 (105-177)||(40840182-40840254)
chr8 (168-217)||(36006088-36006137)
[»] chr1 (9 HSPs)
chr1 (39-292)||(28040468-28040727)
chr1 (29-240)||(19035992-19036203)
chr1 (39-211)||(7794258-7794427)
chr1 (28-220)||(37200841-37201031)
chr1 (107-227)||(38732162-38732282)
chr1 (81-207)||(972251-972375)
chr1 (29-143)||(7435009-7435123)
chr1 (57-207)||(36154622-36154771)
chr1 (118-196)||(15585470-15585548)
[»] chr4 (5 HSPs)
chr4 (39-260)||(53171041-53171265)
chr4 (39-227)||(56461455-56461642)
chr4 (27-200)||(23809027-23809200)
chr4 (110-292)||(16958042-16958230)
chr4 (151-240)||(25707068-25707158)
[»] chr3 (7 HSPs)
chr3 (28-260)||(49018495-49018729)
chr3 (28-227)||(52411234-52411430)
chr3 (39-227)||(29862377-29862568)
chr3 (120-292)||(53786215-53786389)
chr3 (158-211)||(35236723-35236776)
chr3 (114-201)||(43123756-43123843)
chr3 (156-204)||(7501643-7501691)
[»] scaffold0186 (1 HSPs)
scaffold0186 (28-221)||(20310-20503)


Alignment Details
Target: chr7 (Bit Score: 188; Significance: 1e-102; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 8 - 292
Target Start/End: Complemental strand, 5828052 - 5827761
Alignment:
Q  8 atagcgagatatgtggtatatatggactcaaattttgataatgctttggatggtcttcgcggaacgatttcagattttgacgttagtagttttacctgca 107  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| | |||||| ||||||||||| ||||||||||||| ||||    
T  5828052 atagtgagatatgtggtatatatggactcgaattttgataatgctttggatggtcttcgctgtacgattccagattttgacattagtagttttacttgca 5827953  T
Q  108 aggacaccgtccctcctaaagcacaacatgytttggcgagtgctcttcttagtaaaattgttcaagatatagaagttaagtttgacatgaccactagaca 207  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| ||||||||||    
T  5827952 aggacaccgtccctcctaaagcacaacatgttttggcgagtgctcttcttaataaaattggtcaagatatagaagttaagtttgacatggccactagaca 5827853  T
Q  208 gaaggcaattttaggatg-ttgcaagcagtacattctcaaa--tttcttctagctagcc--attgat-ggttagg-cagcatatgtcaccag 292  Q
    ||||||| |||||||||| |||||||||| |||| ||||||  ||||||||||||| ||  |||||| ||||||| ||||||||||||||||    
T  5827852 gaaggcagttttaggatgtttgcaagcagcacatgctcaaaattttcttctagctatcccaattgatgggttaggtcagcatatgtcaccag 5827761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 28 - 260
Target Start/End: Complemental strand, 47679897 - 47679664
Alignment:
Q  28 tatggactcaaattttgataatgctttggatggtcttcgcggaacgatttcagattttgacgttagtagttttacctgcaaggacaccgtccctcctaaa 127  Q
    |||||||||| |||||||||||| |||||||| |||||| |  |||||| || |||||||||||||||||||||| ||||||||    ||||||||||||    
T  47679897 tatggactcagattttgataatgttttggatgatcttcgtgttacgattccaaattttgacgttagtagttttacttgcaaggatt--gtccctcctaaa 47679800  T
Q  128 gcacaacatgytttggcgagtgctcttcttagtaaaattgttcaagatatagaagttaagtttgacatgaccactagacagaaggcaattttaggatg-t 226  Q
    |||| ||||| ||||| |||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || |||||||||| |    
T  47679799 gcaccacatgttttggagagtactctttttagtaaaattgttcaagatatggaagttaagtttgacatgaccactagacagaagacagttttaggatgtt 47679700  T
Q  227 tgcaagcagtacattctca--aatttcttctagcta 260  Q
    |||||| || |||| ||||  | |||||||||||||    
T  47679699 tgcaagtagcacatgctcaggattttcttctagcta 47679664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 29 - 235
Target Start/End: Complemental strand, 19277946 - 19277739
Alignment:
Q  29 atggactcaaattttgataatgctttggatggtcttcgcggaacgatttcagattttgacgttagtagttttacctgcaaggacaccgtccctcctaaag 128  Q
    ||||||||  ||||||||| ||||||||||||||||||  | |||||||||||| |||| ||||| | ||||||  |||| |||| ||||||||||||||    
T  19277946 atggactcggattttgatagtgctttggatggtcttcgtagtacgatttcagatattgatgttagcatttttactagcaaagacatcgtccctcctaaag 19277847  T
Q  129 cacaacatgytttggcgagtgctcttcttagtaaaattgttcaagatatagaagttaagtttgacatgaccactagacagaaggcaattttaggatg-tt 227  Q
    ||||||||| ||||| |||||||||| ||||||||| ||| || ||||| ||||| ||||||||||||||||| || |||||||| ||||| ||||| ||    
T  19277846 cacaacatgttttggtgagtgctctttttagtaaaagtgtccaggatatggaagtcaagtttgacatgaccacgaggcagaaggcgatttttggatgttt 19277747  T
Q  228 gcaagcag 235  Q
    ||||||||    
T  19277746 gcaagcag 19277739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 71 - 211
Target Start/End: Complemental strand, 4175913 - 4175775
Alignment:
Q  71 acgatttcagattttgacgttagtagttttacctgcaaggacaccgtccctcctaaagcacaacatgytttggcgagtgctcttcttagtaaaattgttc 170  Q
    |||||||  |||||||||||||  | |||||| ||||||||||||||||||  |||||||||||||| ||||||||||| |||| || |||||| |||||    
T  4175913 acgatttttgattttgacgttaacaattttacttgcaaggacaccgtccctgttaaagcacaacatgctttggcgagtg-tcttttttgtaaaagtgttc 4175815  T
Q  171 aagatatagaagttaagtttgacatgaccactagacagaag 211  Q
    ||||||| |||| ||| |||||||||||||||||| |||||    
T  4175814 aagatatggaagctaa-tttgacatgaccactagatagaag 4175775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 144 - 227
Target Start/End: Complemental strand, 32585809 - 32585726
Alignment:
Q  144 cgagtgctcttcttagtaaaattgttcaagatatagaagttaagtttgacatgaccactagacagaaggcaattttaggatgtt 227  Q
    ||||||||||| |||||||||||||| || ||||  |||||||||||||||||||||||||||||||| ||  |||||||||||    
T  32585809 cgagtgctctttttagtaaaattgtttaatatatgaaagttaagtttgacatgaccactagacagaagacacctttaggatgtt 32585726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 151; Significance: 4e-80; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 151; E-Value: 4e-80
Query Start/End: Original strand, 39 - 227
Target Start/End: Complemental strand, 27337460 - 27337272
Alignment:
Q  39 attttgataatgctttggatggtcttcgcggaacgatttcagattttgacgttagtagttttacctgcaaggacaccgtccctcctaaagcacaacatgy 138  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||     
T  27337460 attttgataatgctttggatgatcttcgcggaacgattccagattttgacgttagcagttttacttgcaaggacaccgtccctcctaaagcacaacatgt 27337361  T
Q  139 tttggcgagtgctcttcttagtaaaattgttcaagatatagaagttaagtttgacatgaccactagacagaaggcaattttaggatgtt 227  Q
    |||||||||||||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| |||| |||||||    
T  27337360 tttggcgagtgctctttttagtaaagttgttcaagatatggaagttaagtttgacatgaccactagacagaaggcagttttgggatgtt 27337272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 39 - 291
Target Start/End: Complemental strand, 434060 - 433800
Alignment:
Q  39 attttgataatgctttggatggtcttcgcggaacgatttcagattttgacgttagtagttttacctgcaaggacaccgtccctcctaaagcacaacatg- 137  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||     
T  434060 attttgataatgctttggatggtcttcacggaacgattccagattttgacgttagcagttttacttgcaaggacaccgtccctcctaaagcacaacatgt 433961  T
Q  138 ytttggcgagtgctcttcttagtaaaattgttcaagatatagaagttaagtttgacatgaccactagacagaaggcaattttaggatg-ttgcaagcagt 236  Q
     ||||| |||| ||||| |||||||| ||||||||||||| ||| |||||||||| ||||||||||| ||||||| | |||||||||| |||||||||      
T  433960 ttttggtgagtcctctttttagtaaagttgttcaagatatggaacttaagtttgaaatgaccactaggcagaaggtagttttaggatgtttgcaagcacc 433861  T
Q  237 acattctca--aatttcttctagctagcc--attgat-ggttagg-cagcatatgtcacca 291  Q
    |||| ||||  | ||||||||||||| ||  |||||| ||||||| |||||||||||||||    
T  433860 acatgctcaagattttcttctagctatcccaattgatgggttaggccagcatatgtcacca 433800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 28 - 292
Target Start/End: Original strand, 15291352 - 15291623
Alignment:
Q  28 tatggactcaaattttgataatgctttggatggtcttcgcggaacgatttcagattttgacgttagtagttttacctgcaaggacaccgtccctcctaaa 127  Q
    |||||||||  |||| ||||||| ||||||||||||||| || || |||| ||||||||||||||| ||||||||  |||| ||||||||||||||||||    
T  15291352 tatggactcggatttcgataatgttttggatggtcttcgtggtacaattttagattttgacgttagcagttttactagcaaagacaccgtccctcctaaa 15291451  T
Q  128 gcacaacatgytttggcgagtgctcttcttagtaaaattgttcaagatatagaagttaagtttgacatgaccactagacagaaggcaattttaggatg-t 226  Q
    ||  |||||| |||| ||||||||||| ||||||||| |||||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||| |    
T  15291452 gcggaacatgttttgacgagtgctctttttagtaaaagtgttcaagatatggaagttaagtttgacatgaccacgagacagaaggcaattttgggatgtt 15291551  T
Q  227 tgcaagcagtacattctc--aaatttcttctagctagcc--attgat-ggttagg-cagcatatgtcaccag 292  Q
    ||||||||| |||| |||   | ||||||||||||| ||  |||||| ||||||| ||||||||||||||||    
T  15291552 tgcaagcagcacatgctcgggattttcttctagctatcccaattgatgggttaggtcagcatatgtcaccag 15291623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 28 - 177
Target Start/End: Original strand, 6821533 - 6821682
Alignment:
Q  28 tatggactcaaattttgataatgctttggatggtcttcgcggaacgatttcagattttgacgttagtagttttacctgcaaggacaccgtccctcctaaa 127  Q
    |||| |||| |||||||| |||  ||||||||||||||| || |||||| |||||||||||||||  ||||||||  |||| |||| |||||||||||||    
T  6821533 tatgtactcgaattttgacaatattttggatggtcttcgtggtacgattccagattttgacgttaacagttttactagcaaagacatcgtccctcctaaa 6821632  T
Q  128 gcacaacatgytttggcgagtgctcttcttagtaaaattgttcaagatat 177  Q
      | || ||| |||||||||||||||| ||||||||| ||||||||||||    
T  6821633 atataaaatgttttggcgagtgctctttttagtaaaagtgttcaagatat 6821682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 211
Target Start/End: Original strand, 6534023 - 6534075
Alignment:
Q  159 gtaaaattgttcaagatatagaagttaagtttgacatgaccactagacagaag 211  Q
    |||||| |||| ||||||| ||||||||||||||||||| || |||| |||||    
T  6534023 gtaaaagtgtttaagatatggaagttaagtttgacatgatcattagatagaag 6534075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 138; Significance: 3e-72; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 28 - 227
Target Start/End: Complemental strand, 34305275 - 34305076
Alignment:
Q  28 tatggactcaaattttgataatgctttggatggtcttcgcggaacgatttcagattttgacgttagtagttttacctgcaaggacaccgtccctcctaaa 127  Q
    |||||||||| ||||||||||||||||||||||||||| |||  ||||| |||||||||||||||  |||||||| ||||||||||||||||||||||||    
T  34305275 tatggactcagattttgataatgctttggatggtcttcacggtgcgattccagattttgacgttaacagttttacttgcaaggacaccgtccctcctaaa 34305176  T
Q  128 gcacaacatgytttggcgagtgctcttcttagtaaaattgttcaagatatagaagttaagtttgacatgaccactagacagaaggcaattttaggatgtt 227  Q
    |||||||||| |||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| | |||||||||| | |||| |||||||    
T  34305175 gcacaacatgttttggcgagtgctctttttagtaaaattgttcaagatatggaagttaagtttgacatgaccgcaagacagaaggaagtttttggatgtt 34305076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 28 - 227
Target Start/End: Complemental strand, 10402506 - 10402308
Alignment:
Q  28 tatggactcaaattttgataatgctttggatggtcttcgcggaacgatttcagattttgacgttagtagttttacctgcaaggacaccgtccctcctaaa 127  Q
    |||||||||  |||||||||||||||||||||||||| |||  |||||| | |||||||||||||| |||||||| || ||||||| |||||||||||||    
T  10402506 tatggactcggattttgataatgctttggatggtctttgcgatacgattcctgattttgacgttagcagttttacttgtaaggacatcgtccctcctaaa 10402407  T
Q  128 gcacaacatgytttggcgagtgctcttcttagtaaaattgttcaagatatagaagttaagtttgacatgaccactagacagaaggcaattttaggatgtt 227  Q
    |||||||||| |||| ||||||||||| ||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||||| | || |||||||    
T  10402406 gcacaacatgttttgacgagtgctctttttagt-aaatcgttcaagatatggaagttaagtttgacatgaccactagacagaaggcagtgtttggatgtt 10402308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 39 - 227
Target Start/End: Complemental strand, 32120694 - 32120507
Alignment:
Q  39 attttgataatgctttggatggtcttcgcggaacgatttcagattttgacgttagtagttttacctgcaaggacaccgtccctcctaaagcacaacatgy 138  Q
    |||||||||||||||||||||||||||  || |||||| ||||||| |||||||| | |||||| ||| | |||| |||||||||||||||||||||||     
T  32120694 attttgataatgctttggatggtcttcatggtacgattccagattt-gacgttagcaattttacttgcgaagacaacgtccctcctaaagcacaacatgt 32120596  T
Q  139 tttggcgagtgctcttcttagtaaaattgttcaagatatagaagttaagtttgacatgaccactagacagaaggcaattttaggatgtt 227  Q
    |||||||||||||||| ||||  ||| |||||||||||| ||||||||||||||||||||||| ||||||||| ||||| |||||||||    
T  32120595 tttggcgagtgctctttttaggtaaagtgttcaagatatggaagttaagtttgacatgaccacaagacagaagacaattataggatgtt 32120507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 40 - 227
Target Start/End: Complemental strand, 32116400 - 32116214
Alignment:
Q  40 ttttgataatgctttggatggtcttcgcggaacgatttcagattttgacgttagtagttttacctgcaaggacaccgtccctcctaaagcacaacatgyt 139  Q
    |||||||||||||||||||| |||||| || |||||| ||||||| |||||||| ||||||||  |||| |||| ||||| ||||||||||||||||| |    
T  32116400 ttttgataatgctttggatgatcttcgtggtacgattccagattt-gacgttagcagttttactagcaaagacaacgtccttcctaaagcacaacatgtt 32116302  T
Q  140 ttggcgagtgctcttcttagtaaaattgttcaagatatagaagttaagtttgacatgaccactagacagaaggcaattttaggatgtt 227  Q
    ||| |||||| |||| ||||||||| |||||||||||| ||||||||||||||||  ||||| |||||||||  ||||||||| ||||    
T  32116301 ttgacgagtgatctttttagtaaaagtgttcaagatatggaagttaagtttgacacaaccacgagacagaagataattttaggctgtt 32116214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 99 - 235
Target Start/End: Original strand, 45090 - 45227
Alignment:
Q  99 ttacctgcaaggacaccgtccctcctaaagcacaacatgytttggcgagtgctcttcttagtaaaattgttcaagatatagaagttaagtttgacatgac 198  Q
    ||||| |||| |||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||  |||| ||||||||||||||||||||    
T  45090 ttaccagcaaagacaccgtccctcctaaagcacaacatgttttggcgagtgctctttttagtaaaagtgttcagaatatggaagttaagtttgacatgac 45189  T
Q  199 cactagacagaaggcaattttaggatg-ttgcaagcag 235  Q
    |||  |||| |||| |||||| ||||| ||||||||||    
T  45190 cacgggacaaaaggtaatttttggatgtttgcaagcag 45227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 97 - 260
Target Start/End: Original strand, 29337483 - 29337650
Alignment:
Q  97 ttttacctgcaaggacaccgtccctcctaaagcacaacatgytttggcgagtgctcttcttagtaaaattgt-tcaagatatagaagttaagtttgacat 195  Q
    |||||| |||||||||| ||||| ||||||||||||||||  ||||| |||||| ||| ||||||||||    ||||||||| |||||||||||||||||    
T  29337483 ttttacttgcaaggacatcgtccatcctaaagcacaacatattttggtgagtgccctttttagtaaaataaaatcaagatatggaagttaagtttgacat 29337582  T
Q  196 gaccactagacagaaggcaattttaggatg-ttgcaagcagtacattctca--aatttcttctagcta 260  Q
    |||| |||||||||||||  |||| || || |||||||||| |||| ||||  | |||||||||||||    
T  29337583 gacctctagacagaaggccgttttggggtgtttgcaagcagcacatgctcaggattttcttctagcta 29337650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 115 - 210
Target Start/End: Original strand, 7199990 - 7200084
Alignment:
Q  115 cgtccctcctaaagcacaacatgytttggcgagtgctcttcttagtaaaattgttcaagatatagaagttaagtttgacatgaccactagacagaa 210  Q
    ||||||||||||||||||||||| ||||| || |||| || |||||||||||| ||||||||| ||||| |||||||| |||||||| ||||||||    
T  7199990 cgtccctcctaaagcacaacatgttttggtgaatgctttt-ttagtaaaattgatcaagatatggaagtgaagtttgatatgaccacaagacagaa 7200084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 120; Significance: 1e-61; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 29 - 292
Target Start/End: Original strand, 9684744 - 9685015
Alignment:
Q  29 atggactcaaattttgataatgctttggatggtcttcgcggaacgatttcagattttgacgttagtagttttacct-gcaaggacaccgtccctcctaaa 127  Q
    |||||||| ||||||||||||||||||||||||||||| ||  ||||| |||||||||| ||||| | |||||| | |||| |||| |||||||| ||||    
T  9684744 atggactcgaattttgataatgctttggatggtcttcgtggtgcgattccagattttgatgttagcatttttacttagcaaagacatcgtccctcttaaa 9684843  T
Q  128 gcacaacatgytttggcgagtgctcttcttagtaaaattgttcaagatatagaagttaagtttgacatgaccactagacagaaggcaattttaggatg-t 226  Q
    |||||||||| ||||| |||||||||| ||| ||||| |||||| ||||| ||||||||||||||||||||||| ||||||||||||||||| ||||| |    
T  9684844 gcacaacatgttttggtgagtgctctttttaataaaagtgttcaggatatggaagttaagtttgacatgaccacgagacagaaggcaatttttggatgtt 9684943  T
Q  227 tgcaagcagtacattctca--aatttcttctagctagcc--attgat-ggttagg-cagcatatgtcaccag 292  Q
    ||||||||| |||| ||||  | ||||||||||||| ||  |||||| ||||||| ||||||||||||||||    
T  9684944 tgcaagcagcacatactcaagattttcttctagctatccctattgatgggttaggtcagcatatgtcaccag 9685015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 39 - 294
Target Start/End: Complemental strand, 28225762 - 28225505
Alignment:
Q  39 attttgataatgctttggatggtcttcgcggaacgatttcagattttgacgttagtagttttacctgcaaggacaccgtccctcctaaagcacaacatgy 138  Q
    ||||||||||||||||||    ||||||||  |||||| |||||||||||||||  |||||||| |||||||||||||||||||||||||||||||||      
T  28225762 attttgataatgctttgg----tcttcgcgatacgattccagattttgacgttaacagttttacttgcaaggacaccgtccctcctaaagcacaacatat 28225667  T
Q  139 tttggcgagtgctcttcttagtaaaattgttcaagatatagaagttaagtttgacatgaccactagacagaaggcaattttaggatg-ttgcaagcagta 237  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||   ||| ||||| ||||||| || |    
T  28225666 tttggcgagtgctctttttagtaaaattgttcaagatatggaagttatgtttgacatgaccactagacagaaggcgggttttggatgtttgcaagaagca 28225567  T
Q  238 cattctca--aatttcttctagctagcc-attgat-ggttag-gcagcatatgtcaccagcg 294  Q
    ||| ||||  | ||||||||||||| || |||||| ||||||  ||||||||||||||||||    
T  28225566 catgctcaagattttcttctagctatccaattgatgggttagatcagcatatgtcaccagcg 28225505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 45 - 292
Target Start/End: Original strand, 18744364 - 18744618
Alignment:
Q  45 ataatgctttggatggtcttcgcggaacgatttcagattttgacgttagtagttttacctgcaaggacaccgtccctcctaaagcacaacatgytttggc 144  Q
    |||||||||||||||||||||| || || ||| |||||||||| ||||| ||||||||  |||| ||||||||| |||||||||||||||||| ||||||    
T  18744364 ataatgctttggatggtcttcgtggtacaattccagattttgatgttagcagttttactagcaaagacaccgtctctcctaaagcacaacatgttttggc 18744463  T
Q  145 gagtgctcttcttagtaaaattgttcaagatatagaagttaagtttgacatgaccactagacagaaggcaattttaggatg-ttgcaagcagtacattct 243  Q
    |||||||||| ||||||||| |||||| ||||| |||||||||||||| |||||||| ||||||||||||||||| ||||| |||||||||  | || ||    
T  18744464 gagtgctctttttagtaaaagtgttcaggatatggaagttaagtttgagatgaccacgagacagaaggcaatttttggatgtttgcaagcaccaaatgct 18744563  T
Q  244 ca--aatttcttctagctagcc--attgat-ggttagg-cagcatatgtcaccag 292  Q
    ||  ||||||||||||||| ||  |||||| |||||||  |||||||||||||||    
T  18744564 caagaatttcttctagctatcccgattgatgggttaggttagcatatgtcaccag 18744618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 29 - 260
Target Start/End: Original strand, 20142075 - 20142304
Alignment:
Q  29 atggactcaaattttgataatgctttggatggtcttcgcggaacgatttcagattttgacgttagtagttttacctgcaaggacaccgtccctcctaaag 128  Q
    ||||| || ||||||||||||||||| ||||||||| | || |||||| |||||||||| ||||| ||||||||  |||| ||||||||| |||||||||    
T  20142075 atggattcgaattttgataatgctttagatggtctttgtggtacgattccagattttgatgttagcagttttactagcaaagacaccgtctctcctaaag 20142174  T
Q  129 cacaacatgytttggcgagtgctcttcttagtaaaattgttcaagatatagaagttaagtttgacatgaccactagacagaaggcaattttaggatg-tt 227  Q
    |||||||||  ||||||||||||||| |||||||||  ||||| ||||| |||||||||||||||||||||     ||| ||||||||||| ||||| ||    
T  20142175 cacaacatgtcttggcgagtgctctttttagtaaaagcgttcaggatatggaagttaagtttgacatgacc-----acaaaaggcaatttttggatgttt 20142269  T
Q  228 gcaagcagtacattctca--aatttcttctagcta 260  Q
    |||||||| |||| ||||  | |||||||||||||    
T  20142270 gcaagcagcacatgctcaggattttcttctagcta 20142304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 29 - 292
Target Start/End: Original strand, 41867238 - 41867508
Alignment:
Q  29 atggactcaaattttgataatgctttggatggtcttcgcggaacgatttcagattttgacgttagtagttttacctgcaaggacaccgtccctcctaaag 128  Q
    ||||||||  |||||||||||||||| ||||||||||   | |||||| || ||||||| ||||| | ||||||   ||| ||||| ||||||||||||     
T  41867238 atggactcggattttgataatgcttttgatggtcttcatagtacgattccatattttgatgttagcatttttactaacaaagacactgtccctcctaaaa 41867337  T
Q  129 cacaacatgytttggcgagtgctcttcttagtaaaattgttcaagatatagaagttaagtttgacatgaccactagacagaaggcaattttaggatg-tt 227  Q
    ||||||||  |||||||||||||||| ||||||||| ||| || ||||| ||||| |||||||||||||||||  | |||||||| ||||| | ||| ||    
T  41867338 cacaacatattttggcgagtgctctttttagtaaaagtgtccaggatatggaagtcaagtttgacatgaccacggggcagaaggcgatttttgaatgttt 41867437  T
Q  228 gcaagcagtacattctc--aaatttcttctagctagcc--attgat-ggttagg-cagcatatgtcaccag 292  Q
    |||||||| |||| |||  || ||||||||||||| ||  |||||| ||||||| ||||||||||||||||    
T  41867438 gcaagcagcacatgctcagaattttcttctagctatcccgattgatgggttaggtcagcatatgtcaccag 41867508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 39 - 288
Target Start/End: Original strand, 19161168 - 19161422
Alignment:
Q  39 attttgataatgctttggatggtcttcgcggaacgatttcagattttgacgttagtagttttacctgcaaggacaccgtccctcctaaagcacaacatgy 138  Q
    |||||||||||||||| ||| ||| ||| || | |||| |||||||||| ||||| ||||| ||  ||||  |||||||||||||||| ||||||||||     
T  19161168 attttgataatgcttttgattgtcctcgtggtatgattccagattttgatgttagcagttt-actagcaaaaacaccgtccctcctaatgcacaacatg- 19161265  T
Q  139 tttggcgagtgctcttcttagtaaaattgttcaagatatagaagttaagtttgacatgaccactagacagaaggcaattttaggatg-ttgcaagcagta 237  Q
    |||||| ||||||||| ||  ||||| |||||||||||| ||||||||||||||||||| ||| ||||||||| ||| ||||||||| ||||||||| ||    
T  19161266 tttggcaagtgctctttttcataaaaatgttcaagatatggaagttaagtttgacatgatcacgagacagaagacaactttaggatgtttgcaagcaata 19161365  T
Q  238 cattctca--aatttcttctagctagcc--attgat-ggttagg-cagcatatgtca 288  Q
     || ||||  | ||||||||||||| ||  |||||| ||||||| ||||||||||||    
T  19161366 tatgctcaggattttcttctagctatcctgattgataggttaggtcagcatatgtca 19161422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 81 - 227
Target Start/End: Complemental strand, 17345363 - 17345217
Alignment:
Q  81 attttgacgttagtagttttacctgcaaggacaccgtccctcctaaagcacaacatgytttggcgagtgctcttcttagtaaaattgttcaagatataga 180  Q
    ||||||| ||||| | ||||||  |||| ||| ||||||||||||||||||||| || ||||| |||||||||| ||||||||| ||||||  |||| ||    
T  17345363 attttgatgttagcaattttactagcaaagacgccgtccctcctaaagcacaacttgttttggtgagtgctctttttagtaaaagtgttcagcatatgga 17345264  T
Q  181 agttaagtttgacatgaccactagacagaaggcaattttaggatgtt 227  Q
    ||||||||||||||||||||| ||||| ||| ||||||| |||||||    
T  17345263 agttaagtttgacatgaccaccagacaaaagacaatttttggatgtt 17345217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 42 - 203
Target Start/End: Complemental strand, 8588849 - 8588688
Alignment:
Q  42 ttgataatgctttggatggtcttcgcggaacgatttcagattttgacgttagtagttttacctgcaaggacaccgtccctcctaaagcacaacatgyttt 141  Q
    |||| |||| |||| || ||||||| |  ||||||||| | ||||||||||  |||||||| ||||||| || | ||||||| ||||||||||||| |||    
T  8588849 ttgacaatgttttgtatagtcttcgtgatacgatttcaaagtttgacgttaacagttttacttgcaagggcaacatccctccaaaagcacaacatgtttt 8588750  T
Q  142 ggcgagtgctcttcttagtaaaattgttcaagatatagaagttaagtttgacatgaccacta 203  Q
    ||||||||  ||| ||| ||||| |||||||||||| ||||| |||||||||||||||||||    
T  8588749 ggcgagtgtcctttttaataaaagtgttcaagatatggaagtcaagtttgacatgaccacta 8588688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 79 - 200
Target Start/End: Original strand, 34185439 - 34185560
Alignment:
Q  79 agattttgacgttagtagttttacctgcaaggacaccgtccctcctaaagcacaacatgytttggcgagtgctcttcttagtaaaattgttcaagatata 178  Q
    |||||||||  ||||||||||||| |||||| |||||||||| ||||||| | |||||  ||||||||||||  || ||||||||| ||||||||||||     
T  34185439 agattttgaatttagtagttttacttgcaagaacaccgtcccacctaaagtagaacatattttggcgagtgccttttttagtaaaagtgttcaagatatg 34185538  T
Q  179 gaagttaagtttgacatgacca 200  Q
    ||||| |||||||| |||||||    
T  34185539 gaagtgaagtttgagatgacca 34185560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 141
Target Start/End: Original strand, 33611937 - 33612006
Alignment:
Q  71 acgatttcagattttgacgttagtagttttacctgcaaggacaccgtccctcctaaagcacaacatgyttt 141  Q
    ||||||||||||||||||| | |||||||| | |||||||| ||| ||||||||||| ||||||||| |||    
T  33611937 acgatttcagattttgacgct-gtagttttgcttgcaaggataccatccctcctaaaacacaacatgtttt 33612006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 240
Target Start/End: Complemental strand, 44687044 - 44686982
Alignment:
Q  179 gaagttaagtttgacatgaccactagacagaaggcaattttaggatg-ttgcaagcagtacat 240  Q
    ||||||||||||||||| | ||||||| |||||||| |||| ||||| |||||||||| ||||    
T  44687044 gaagttaagtttgacataaacactagatagaaggcagtttttggatgtttgcaagcagcacat 44686982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 115; Significance: 1e-58; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 28 - 260
Target Start/End: Complemental strand, 24125805 - 24125570
Alignment:
Q  28 tatggactcaaattttgataatgctttggatggtcttcgcggaacgatttcagattttgacgttagtagttttacctgcaaggacaccgtccctcctaaa 127  Q
    ||||||||| |||||||| |||||||||||||||||||| || ||||||||||||||||| ||||||||||||||  |||| |||| || ||||||||||    
T  24125805 tatggactcgaattttgaaaatgctttggatggtcttcgtggtacgatttcagattttgatgttagtagttttactagcaaagacatcgcccctcctaaa 24125706  T
Q  128 gcacaacatgytttggcgagtgctcttcttagtaaaattgttcaagatatagaagttaagtttgacatgaccactagacagaaggcaattttaggatg-t 226  Q
    ||| |||||| ||||| |||||||||| ||||||||| |||||||||||| |||||||||||||||||||| || ||| || ||||||| |||| ||| |    
T  24125705 gcataacatgttttggtgagtgctctttttagtaaaagtgttcaagatatggaagttaagtttgacatgacaacgagataggaggcaatattagaatgtt 24125606  T
Q  227 tgcaagcagtacattctca--aatttcttctagcta 260  Q
    ||||||||  |||| ||||  | |||||||||||||    
T  24125605 tgcaagcatcacatgctcaggattttcttctagcta 24125570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 29 - 245
Target Start/End: Complemental strand, 37517866 - 37517649
Alignment:
Q  29 atggactcaaattttgataatgctttggatggtcttcgcggaacgatttcagattttgacgttagtagttttacctgcaaggacaccgtccctcctaaag 128  Q
    ||||||||  ||||||| |||||||||||||||||||| || ||||||| | ||||||| ||||| ||||||||  |||| |||||||||||||||||||    
T  37517866 atggactcggattttgaaaatgctttggatggtcttcgtggtacgatttaaaattttgatgttagcagttttactagcaatgacaccgtccctcctaaag 37517767  T
Q  129 cacaacatgytttggcgagtgctcttcttagtaaaattgttcaagatatagaagttaagtttgacatgaccactagacagaaggcaattttaggatg-tt 227  Q
    ||| ||||| ||||||||||| |||| |||| |||| | |||| |||||  |||||||||||||||||||||| ||| |||||  |||||| ||||| ||    
T  37517766 cacgacatgttttggcgagtgttctttttagaaaaagttttcatgatatgaaagttaagtttgacatgaccacgagatagaagataatttttggatgttt 37517667  T
Q  228 gcaagcagtacattctca 245  Q
    |||||||| |||| ||||    
T  37517666 gcaagcagcacatgctca 37517649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 28 - 246
Target Start/End: Original strand, 25021131 - 25021350
Alignment:
Q  28 tatggactcaaattttgataatgctttggatggtcttcgcggaacgatttcagattttgacgttagtagttttacctgcaaggacaccgtccctcctaaa 127  Q
    |||||| || |||||||||||||||||||||| |||||| || ||||||  ||||||||||||||| || |||||  || ||||||  |||| |||||||    
T  25021131 tatggagtcgaattttgataatgctttggatgatcttcgtggtacgattctagattttgacgttagcagctttactggcgaggacattgtccttcctaaa 25021230  T
Q  128 gcacaacatgytttggcgagtgctcttcttagtaaaattgttcaagatatagaagttaagtttgacatgaccactagacagaaggcaattttaggatg-t 226  Q
    |||||||||| |||||||||||| ||| ||| ||||  |||||||||||| |||||||||||||| |||||||||||||| |||||   |||||| || |    
T  25021231 gcacaacatgttttggcgagtgccctttttattaaaggtgttcaagatatggaagttaagtttgatatgaccactagacataaggcggatttagggtgtt 25021330  T
Q  227 tgcaagcagtacattctcaa 246  Q
    ||||||||| |||| |||||    
T  25021331 tgcaagcagcacatgctcaa 25021350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 113 - 224
Target Start/End: Complemental strand, 500920 - 500809
Alignment:
Q  113 accgtccctcctaaagcacaacatgytttggcgagtgctcttcttagtaaaattgttcaagatatagaagttaagtttgacatgaccactagacagaagg 212  Q
    |||||||||  |||||||||||||| ||||||||||||| || ||||||||| |||||||||||| |||||||||||| |||| | ||| | | |||||     
T  500920 accgtcccttttaaagcacaacatgttttggcgagtgctttttttagtaaaagtgttcaagatatggaagttaagtttaacataaacacgaaaaagaaga 500821  T
Q  213 caattttaggat 224  Q
    ||||||||||||    
T  500820 caattttaggat 500809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 52 - 174
Target Start/End: Original strand, 10950552 - 10950674
Alignment:
Q  52 tttggatggtcttcgcggaacgatttcagattttgacgttagtagttttacctgcaaggacaccgtccctcctaaagcacaacatgytttggcgagtgct 151  Q
    |||| |||||||||| |  || |||||| ||||||||||||| | |||||| |||||||||||| | ||| ||||||||||||||| |||| ||||||||    
T  10950552 tttgaatggtcttcgtgatacaatttcaaattttgacgttagcaattttacttgcaaggacaccattccttctaaagcacaacatgttttgacgagtgct 10950651  T
Q  152 cttcttagtaaaattgttcaaga 174  Q
    |||  |||||||| |||||||||    
T  10950652 ctttatagtaaaagtgttcaaga 10950674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 52 - 174
Target Start/End: Original strand, 10958557 - 10958679
Alignment:
Q  52 tttggatggtcttcgcggaacgatttcagattttgacgttagtagttttacctgcaaggacaccgtccctcctaaagcacaacatgytttggcgagtgct 151  Q
    |||| |||||||||| |  || |||||| ||||||||||||| | |||||| |||||||||||| | ||| ||||||||||||||| |||| ||||||||    
T  10958557 tttgaatggtcttcgtgatacaatttcaaattttgacgttagcaattttacttgcaaggacaccattccttctaaagcacaacatgttttgacgagtgct 10958656  T
Q  152 cttcttagtaaaattgttcaaga 174  Q
    |||  |||||||| |||||||||    
T  10958657 ctttatagtaaaagtgttcaaga 10958679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 156 - 200
Target Start/End: Complemental strand, 10190194 - 10190150
Alignment:
Q  156 ttagtaaaattgttcaagatatagaagttaagtttgacatgacca 200  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||    
T  10190194 ttaggaaaattgtttaagatatagaagttaagtttgacatgacca 10190150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 80 - 210
Target Start/End: Complemental strand, 140027 - 139898
Alignment:
Q  80 gattttgacgttagtagttttacctgcaaggacaccgtccctcctaaagcacaacatgytttggcgagtgctcttcttagtaaaattgttcaagatatag 179  Q
    ||||||||| |||  ||||||||  |||| ||||  || |||||||| |||||||||| ||||| |||||  ||| |||||| || |||| | ||| | |    
T  140027 gattttgactttatcagttttactagcaatgacattgttcctcctaa-gcacaacatgttttggtgagtgtcctttttagtagaaatgttaaggatgtgg 139929  T
Q  180 aagttaagtttgacatgaccactagacagaa 210  Q
    |||| ||||||||||||||||| ||| ||||    
T  139928 aagtgaagtttgacatgaccacgagatagaa 139898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 102
Target Start/End: Complemental strand, 4700407 - 4700344
Alignment:
Q  39 attttgataatgctttggatggtcttcgcggaacgatttcagattttgacgttagtagttttac 102  Q
    ||||||| |||||||||||||||||||| || ||||||  ||||||||||  ||| ||||||||    
T  4700407 attttgacaatgctttggatggtcttcgtggtacgattctagattttgactgtagcagttttac 4700344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 177
Target Start/End: Complemental strand, 40840254 - 40840182
Alignment:
Q  105 gcaaggacaccgtccctcctaaagcacaacatgytttggcgagtgctcttcttagtaaaattgttcaagatat 177  Q
    |||||||||||||||||| ||||||  |||||| |||| ||||||   || ||||||||| |||||| |||||    
T  40840254 gcaaggacaccgtccctcttaaagccgaacatgttttgacgagtgtcatttttagtaaaagtgttcaggatat 40840182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 217
Target Start/End: Complemental strand, 36006137 - 36006088
Alignment:
Q  168 ttcaagatatagaagttaagtttgacatgaccactagacagaaggcaatt 217  Q
    |||||||||| ||||| ||||||||||||||||| ||| |||| ||||||    
T  36006137 ttcaagatatggaagtgaagtttgacatgaccacaagatagaaagcaatt 36006088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 113; Significance: 2e-57; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 39 - 292
Target Start/End: Original strand, 28040468 - 28040727
Alignment:
Q  39 attttgataatgctttggatggtcttcgcggaacgatttcagattttgacgttagtagttttacctgcaaggacaccgtccctcctaaagcacaacatgy 138  Q
    |||||||||||||||||||||||||||| || ||||||  ||||||||| ||||| ||||||||  |||| |||||| |||||||||||||||||||||     
T  28040468 attttgataatgctttggatggtcttcgtggtacgattctagattttgatgttagcagttttactagcaatgacaccatccctcctaaagcacaacatgt 28040567  T
Q  139 tttggcgagtgctcttcttagtaaaattgttcaagatatagaagttaagtttgacatgaccactagacagaaggcaattttaggatg-ttgcaagcagta 237  Q
    ||| |||||||||||| ||||||||| || ||| ||||| ||| ||||||||||||||||||| ||||||||||||||||| ||||| |||||||||| |    
T  28040568 ttttgcgagtgctctttttagtaaaaatg-tcaggatatggaaattaagtttgacatgaccacgagacagaaggcaatttttggatgtttgcaagcagaa 28040666  T
Q  238 cattctca--aatttcttctagctagcc--attga-tggttagg-cagcatatgtcaccag 292  Q
    ||| ||||  | ||||||||||||| ||  ||||| |||||||| || |||||||||||||    
T  28040667 catgctcaagattttcttctagctatcccgattgattggttaggtcaacatatgtcaccag 28040727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 29 - 240
Target Start/End: Complemental strand, 19036203 - 19035992
Alignment:
Q  29 atggactcaaattttgataatgctttggatggtcttcgcggaacgatttcagattttgacgttagtagttttacctgcaaggacaccgtccctcctaaag 128  Q
    ||||||||| |||||||||||||||||||| ||||||| ||   |||| |||||||| | ||||| ||||||||  | || ||| ||||||||| |||||    
T  19036203 atggactcagattttgataatgctttggattgtcttcgtggtgggattccagatttttatgttagcagttttactagaaaagac-ccgtccctcataaag 19036105  T
Q  129 cacaacatgytttggcgagtgctcttcttagtaaaattgttcaagatatagaagttaagtttgacatgaccactagacagaaggcaattttaggatgt-t 227  Q
    ||||||||| |||||||||||||||| ||||||||| |||||| ||||| ||||||||||||||||||||||| ||||| ||||||||||| |||||| |    
T  19036104 cacaacatgttttggcgagtgctctttttagtaaaagtgttcaggatatggaagttaagtttgacatgaccacgagacaaaaggcaatttttggatgtct 19036005  T
Q  228 gcaagcagtacat 240  Q
    |||||||| ||||    
T  19036004 gcaagcagcacat 19035992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 39 - 211
Target Start/End: Original strand, 7794258 - 7794427
Alignment:
Q  39 attttgataatgctttggatggtcttcgcggaacgatttcagattttgacgttagtagttttacctgcaaggacaccgtccctcctaaagcacaacatgy 138  Q
    |||||||||||| |||||||||||||| ||| || ||| ||||||||||| ||||||||||||| |||||||| | ||||||||||||| || |||||      
T  7794258 attttgataatgttttggatggtcttcacggtaccattccagattttgac-ttagtagttttacttgcaaggatatcgtccctcctaaaacataacatat 7794356  T
Q  139 tttggcgagtgctcttcttagtaaaattgttcaagatatagaagttaagtttgacatgaccactagacagaag 211  Q
    ||| |||||||||| | |||||||||  |||||| |||| |||||||||||| ||||||||||||||||||||    
T  7794357 tttagcgagtgctcgttttagtaaaa--gttcaaaatatggaagttaagttttacatgaccactagacagaag 7794427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 28 - 220
Target Start/End: Complemental strand, 37201031 - 37200841
Alignment:
Q  28 tatggactcaaattttgataatgctttggatggtcttcgcggaacgatttcagattttgacgttagtagttttacctgcaaggacaccgtccctcctaaa 127  Q
    ||||||||| | |||| ||||||||||||||| |||||| || |||||| || |||||||| ||||||||||||| |||||| ||  ||||| |||||||    
T  37201031 tatggactcgattttttataatgctttggatgatcttcgtggcacgattccaaattttgacattagtagttttacttgcaagcacgtcgtccatcctaaa 37200932  T
Q  128 gcacaacatgytttggcgagtgctcttcttagtaaaattgttcaagatatagaagttaagtttgacatgaccactagacagaaggcaatttta 220  Q
    || ||  ||| ||||| |||||  ||| |||| |||| |||||||||||| |||||||| ||||||||||||||||  || ||| ||||||||    
T  37200931 gcgca--atgttttggtgagtgtcctttttaggaaaagtgttcaagatatggaagttaaatttgacatgaccactacgcataagacaatttta 37200841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 107 - 227
Target Start/End: Complemental strand, 38732282 - 38732162
Alignment:
Q  107 aaggacaccgtccctcctaaagcacaacatgytttggcgagtgctcttcttagtaaaattgttcaagatatagaagttaagtttgacatgaccactagac 206  Q
    ||||||| ||||| ||||||||||||||| | |||| ||| ||  | | ||||||||| |||||||||||| ||||||||||||||||||| ||||||||    
T  38732282 aaggacaacgtccttcctaaagcacaacaagttttgacgattgtccattttagtaaaagtgttcaagatatggaagttaagtttgacatgatcactagac 38732183  T
Q  207 agaaggcaattttaggatgtt 227  Q
    ||||| || ||||||||||||    
T  38732182 agaagtcacttttaggatgtt 38732162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 81 - 207
Target Start/End: Complemental strand, 972375 - 972251
Alignment:
Q  81 attttgacgttagtagttttacctgcaaggacaccgtccctcctaaagcacaacatgytttggcgagtgctcttcttagtaaaattgttcaagatataga 180  Q
    ||||||||||||| | |||||| |||||| ||| ||||| | ||||| ||||||||| |||||||||||  ||| ||||| ||| ||||||||||||  |    
T  972375 attttgacgttagcaattttacttgcaagcacatcgtcctttctaaa-cacaacatgttttggcgagtgtcctt-ttagtgaaagtgttcaagatatgaa 972278  T
Q  181 agttaagtttgacatgaccactagaca 207  Q
    |||||||||| ||| ||| || |||||    
T  972277 agttaagtttaacaagacaacaagaca 972251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 143
Target Start/End: Complemental strand, 7435123 - 7435009
Alignment:
Q  29 atggactcaaattttgataatgctttggatggtcttcgcggaacgatttcagattttgacgttagtagttttacctgcaaggacaccgtccctcctaaag 128  Q
    ||||||||  |||||||  ||| |||||||||||||||  | || |||  |||||||||| |||||||||||||  | ||||||| ||||||||| ||||    
T  7435123 atggactctgattttgacgatgttttggatggtcttcgtagtaccattctagattttgactttagtagttttactagtaaggacatcgtccctccaaaag 7435024  T
Q  129 cacaacatgytttgg 143  Q
    || |||||| |||||    
T  7435023 cataacatgttttgg 7435009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 57 - 207
Target Start/End: Original strand, 36154622 - 36154771
Alignment:
Q  57 atggtcttcgcggaacgatttcagattttgacgttagtagttttacctgcaaggacaccgtccctcctaaagcacaacatgytttggcgagtgctcttct 156  Q
    |||||||||| || ||||| ||| ||||| || |||| ||||||||  ||||  |||  |||||||||||| ||||||||| |||||||||| | ||| |    
T  36154622 atggtcttcgtggtacgatgtcatattttaactttagcagttttactagcaac-acaatgtccctcctaaaacacaacatgttttggcgagttccctttt 36154720  T
Q  157 tagtaaaattgttcaagatatagaagttaagtttgacatgaccactagaca 207  Q
    |||||||| |||| | ||| | ||| | ||||||| |||||| || |||||    
T  36154721 tagtaaaagtgtttaggatgtggaaatgaagtttggcatgactacaagaca 36154771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 196
Target Start/End: Complemental strand, 15585548 - 15585470
Alignment:
Q  118 ccctcctaaagcacaacatgytttggcgagtgctcttcttagtaaaattgttcaagatatagaagttaagtttgacatg 196  Q
    |||||||||||| | ||||| |||| ||||||| ||| ||||||||| |||||| || || ||| |  |||||||||||    
T  15585548 ccctcctaaagctcgacatgttttgacgagtgccctttttagtaaaagtgttcaggacatggaaatacagtttgacatg 15585470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 108; Significance: 2e-54; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 39 - 260
Target Start/End: Complemental strand, 53171265 - 53171041
Alignment:
Q  39 attttgataatgctttggatggtcttcgcggaacgatttcagattttgacgttagtagttttacctgcaaggacaccgtccctcctaaagcacaacatgy 138  Q
    |||||||||||  ||||||| ||||||| ||  |||||||||||||||| ||||||||||||||  |||| |||| |||||||||||||||||||||||     
T  53171265 attttgataatattttggattgtcttcgtggtgcgatttcagattttgatgttagtagttttactagcaaagacatcgtccctcctaaagcacaacatgt 53171166  T
Q  139 tttggcgagtgctcttcttagtaaaattgttcaagatatagaagttaagtttgacatgaccactagacagaaggcaattttaggatg-ttgcaagcagta 237  Q
    |||||||||||||||| ||||||||| ||||||| |||| ||||||||||||||||| ||||| ||| ||||  ||||||| ||||| |||||||||| |    
T  53171165 tttggcgagtgctctttttagtaaaagtgttcaaaatatggaagttaagtttgacataaccacgagaaagaaaacaatttttggatgtttgcaagcagca 53171066  T
Q  238 cattctca--aatttcttctagcta 260  Q
    ||| ||||  | |||||||||||||    
T  53171065 catgctcaggattttcttctagcta 53171041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 39 - 227
Target Start/End: Original strand, 56461455 - 56461642
Alignment:
Q  39 attttgataatgctttggatggtcttcgcggaacgatttcagattttgacgttagtagttttacctgcaaggacaccgtccctcctaaagcacaacatgy 138  Q
    ||||| ||||||||||||||| |||||| || ||||||  |||||||||| || | ||||||||  |||||||||  |||||||||||||||||||||      
T  56461455 attttaataatgctttggatg-tcttcgtggtacgattctagattttgacattggcagttttactagcaaggacattgtccctcctaaagcacaacatat 56461553  T
Q  139 tttggcgagtgc-tcttcttagtaaaattgttcaagatatagaagttaagtttgacatgaccactagacagaaggcaattttaggatgtt 227  Q
    |||||||||||| | || ||||||||| |||||||||||| ||||||||| || ||||||||||||||||||||| | ||||||||||||    
T  56461554 tttggcgagtgcttttttttagtaaaagtgttcaagatatggaagttaag-ttcacatgaccactagacagaaggaagttttaggatgtt 56461642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 27 - 200
Target Start/End: Original strand, 23809027 - 23809200
Alignment:
Q  27 atatggactcaaattttgataatgctttggatggtcttcgcggaacgatttcagattttgacgttagtagttttacctgcaaggacaccgtccctcctaa 126  Q
    ||||||||||  ||||| | | |||||||||||||||||| || | ||||| | |||||||| |||||||||||||  | |||||||||||||||| |||    
T  23809027 atatggactccgattttcacattgctttggatggtcttcgtggtatgattttaaattttgactttagtagttttactagtaaggacaccgtccctcataa 23809126  T
Q  127 agcacaacatgytttggcgagtgctcttcttagtaaaattgttcaagatatagaagttaagtttgacatgacca 200  Q
    ||||||||||  ||||| || || | || ||||||||| |||||||||||| ||||| || |||||||||||||    
T  23809127 agcacaacatattttggtgattggtttttttagtaaaaatgttcaagatatggaagtgaaatttgacatgacca 23809200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 110 - 292
Target Start/End: Complemental strand, 16958230 - 16958042
Alignment:
Q  110 gacaccgtccctcctaaagcacaacatgytttggcgagtgctcttcttagtaaaattgttcaagatatagaagttaagtttgacatgaccactagacaga 209  Q
    ||||| || |||| |||||||||||||| |||| ||||||||||| | ||||||| || ||| ||||| ||||||||||||||||| || || |||||||    
T  16958230 gacactgttcctcataaagcacaacatgttttg-cgagtgctcttttgagtaaaagtgctcacgatatggaagttaagtttgacataactacgagacaga 16958132  T
Q  210 aggcaattttaggat-gttgcaagcagtacat--tctcaaatttcttctagctagc--cattgatggtta--ggcagcatatgtcaccag 292  Q
    |||||||||||||||  |||||||||| ||||  |||  | ||||||||||||| |  ||||||||| ||  | ||||||||||||||||    
T  16958131 aggcaattttaggatatttgcaagcagcacatgctctagattttcttctagctatcctcattgatgggtaaggccagcatatgtcaccag 16958042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 151 - 240
Target Start/End: Complemental strand, 25707158 - 25707068
Alignment:
Q  151 tcttcttagtaaaattgttcaagatatagaagttaagtttgacatgaccactagacagaaggcaattttaggatg-ttgcaagcagtacat 240  Q
    |||| ||||||||| |||| || |||| ||||||||||||||||| |  ||||||||||||| | |||||||||| |||||||||| ||||    
T  25707158 tctttttagtaaaagtgtttaaaatatggaagttaagtttgacataattactagacagaaggaagttttaggatgtttgcaagcagcacat 25707068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 103; Significance: 2e-51; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 28 - 260
Target Start/End: Complemental strand, 49018729 - 49018495
Alignment:
Q  28 tatggactcaaattttgataatgctttggatggtcttcgcggaacgatttcagattttgacgttagtagttttacctgcaaggacaccgtccctcctaaa 127  Q
    ||||||||| ||||| |||||||||||||||||| |||| |  ||||||  ||||||||||||||| ||||||||  |||| ||||  ||| ||||||||    
T  49018729 tatggactcgaattt-gataatgctttggatggttttcgtgctacgattctagattttgacgttagcagttttactagcaaagacattgtctctcctaaa 49018631  T
Q  128 gcacaacatgytttggcgagtgctcttcttagtaaaattgttcaagatatagaagttaagtttgacatgaccactagacagaaggcaattttaggatg-t 226  Q
    |||||||||| |||||||||||||||| ||| ||||| | ||||||||||  |||||||||||||| ||||||| ||||| ||| ||||||||||||| |    
T  49018630 gcacaacatgttttggcgagtgctctttttaataaaagttttcaagatatgtaagttaagtttgacgtgaccacgagacaaaagacaattttaggatgtt 49018531  T
Q  227 tgcaagcagtacattctca--aatttcttctagcta 260  Q
    |||||||||||||| ||||  | |||||||||||||    
T  49018530 tgcaagcagtacatgctcatgattttcttctagcta 49018495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 28 - 227
Target Start/End: Original strand, 52411234 - 52411430
Alignment:
Q  28 tatggactcaaattttgataatgctttggatggtcttcgcggaacgatttcagattttgacgttagtagttttacctgcaaggacaccgtccctcctaaa 127  Q
    |||||||||  ||||||||||||||||| |||||||||| || ||||||||| |||||||| |||  |||||||| |||||||||||||||| |||||||    
T  52411234 tatggactcggattttgataatgctttgaatggtcttcgtggtacgatttcaaattttgacattatcagttttacttgcaaggacaccgtccttcctaaa 52411333  T
Q  128 gcacaacatgytttggcgagtgctcttcttagtaaaattgttcaagatatagaagttaagtttgacatgaccactagacagaaggcaattttaggatgtt 227  Q
    ||   ||||| ||| |||||||||||| ||||||||| |||| ||||||| ||||||||||||| ||||| || |||||| ||| |||||||||| ||||    
T  52411334 gc---acatgttttagcgagtgctctttttagtaaaagtgttaaagatatggaagttaagtttggcatgaacattagacaaaagacaattttagggtgtt 52411430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 39 - 227
Target Start/End: Complemental strand, 29862568 - 29862377
Alignment:
Q  39 attttgataatgctttggatggtcttcgcggaacgatttcagattttgacgttagtagttttacctgcaaggacaccgtccctcctaaagcacaacatgy 138  Q
    |||||||||||||||||||||||||||| || ||||||  |||||||| | |||||||||||||   |||||||| |||||||||||||||||||||||     
T  29862568 attttgataatgctttggatggtcttcgtggtacgattctagattttggcattagtagttttactaacaaggacatcgtccctcctaaagcacaacatgt 29862469  T
Q  139 tttggcgagtgc---tcttcttagtaaaattgttcaagatatagaagttaagtttgacatgaccactagacagaaggcaattttaggatgtt 227  Q
    |||||| | |||   | || ||||||||| |||||||||||| ||||||||||||||||||| |||| |||| || ||| ||||||||||||    
T  29862468 tttggccaatgctgttttttttagtaaaagtgttcaagatatggaagttaagtttgacatgatcactcgacataatgcagttttaggatgtt 29862377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 120 - 292
Target Start/End: Complemental strand, 53786389 - 53786215
Alignment:
Q  120 ctcctaaagcacaacatgytttggcgagtgctcttcttagtaaaattgttcaagatatagaagttaagtttgacatgaccactagacagaaggcaatttt 219  Q
    |||||||| ||||||||| |||||||||||||||| ||||||||| ||||||||| || |     ||||||||||||||||| ||||| |||||||||||    
T  53786389 ctcctaaaacacaacatgttttggcgagtgctctttttagtaaaagtgttcaagacatgg-----aagtttgacatgaccacgagacataaggcaatttt 53786295  T
Q  220 aggatg-ttgcaagcagtacattctca--aatttcttctagctagcc--attgat-ggttagg-cagcatatgtcaccag 292  Q
     ||||| |||||||||  |||| ||||  | |||||||||||||  |  |||||| ||||||| ||||||||||||||||    
T  53786294 tggatgtttgcaagcaccacatgctcaagattttcttctagctattctgattgatgggttaggtcagcatatgtcaccag 53786215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 211
Target Start/End: Complemental strand, 35236776 - 35236723
Alignment:
Q  158 agtaaaattgttcaagatatagaagttaagtttgacatgaccactagacagaag 211  Q
    ||||||||| ||||||||||  ||||||||||||||| || |||||||||||||    
T  35236776 agtaaaattcttcaagatatgaaagttaagtttgacaggatcactagacagaag 35236723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 114 - 201
Target Start/End: Complemental strand, 43123843 - 43123756
Alignment:
Q  114 ccgtccctcctaaagcacaacatgytttggcgagtgctcttcttagtaaaattgttcaagatatagaagttaagtttgacatgaccac 201  Q
    ||||||||||||||| ||||||||  |||| |||||   || ||| ||||| ||||||| |||| ||| | |||||||||||||||||    
T  43123843 ccgtccctcctaaagtacaacatgtattggtgagtgtcttttttaataaaagtgttcaacatattgaaataaagtttgacatgaccac 43123756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 204
Target Start/End: Original strand, 7501643 - 7501691
Alignment:
Q  156 ttagtaaaattgttcaagatatagaagttaagtttgacatgaccactag 204  Q
    ||||||||| |||| |||||||  ||||||||||| |||||||||||||    
T  7501643 ttagtaaaagtgtttaagatatgaaagttaagtttcacatgaccactag 7501691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 28 - 221
Target Start/End: Complemental strand, 20503 - 20310
Alignment:
Q  28 tatggactcaaattttgataatgctttggatggtcttcgcggaacgatttcagattttgacgttagtagttttacctgcaaggacaccgtccctcctaaa 127  Q
    |||||||||| |||||||||||| |||  ||||||||||  |  | ||||||||||||||| |||  | |||||| ||||| ||| ||||| ||||||||    
T  20503 tatggactcagattttgataatgttttttatggtcttcgtagtgcaatttcagattttgacattaacaattttacttgcaaagactccgtctctcctaaa 20404  T
Q  128 gcacaacatgytttggcgagtgctcttcttagtaaaattgttcaagatatagaagttaagtttgacatgaccactagacagaaggcaattttag 221  Q
    |||||||||| |||||||| ||| ||| ||| ||||| ||||||||||||  |||||||||||||||||||||||||||||||| || ||||||    
T  20403 gcacaacatgttttggcgaatgccctttttaataaaagtgttcaagatatgaaagttaagtttgacatgaccactagacagaagacagttttag 20310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University