View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5228_low_13 (Length: 208)
Name: NF5228_low_13
Description: NF5228
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5228_low_13 |
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Alignment Details
Target: chr5 (Bit Score: 171; Significance: 5e-92; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 171; E-Value: 5e-92
Query Start/End: Original strand, 19 - 193
Target Start/End: Original strand, 7755268 - 7755442
Alignment:
| Q |
19 |
aagaggacccaatgcaacaatgaggacacaaaggaggacagaaacagaagaatctcgcatgacatattgagttgaagagtttaagatattagtttgtttt |
118 |
Q |
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| T |
7755268 |
aagaggacccaatgcaacaatgaggacacaaaggaggacagaaacagaagaatctcgcatgacatattgagttgaagaatttaagatattagtttgtttt |
7755367 |
T |
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| Q |
119 |
gatcccattctgtaccagctaccagtgttaagaaatggtttcttaaggttgtttccatcttcataatcttctctg |
193 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7755368 |
gatcccattctgtaccagctaccagtgttaagaaatggtttcttaaggttgtttccatcttcataatcttctctg |
7755442 |
T |
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