View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5229-Insertion-11 (Length: 532)
Name: NF5229-Insertion-11
Description: NF5229
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5229-Insertion-11 |
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Alignment Details
Target: chr7 (Bit Score: 421; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 421; E-Value: 0
Query Start/End: Original strand, 8 - 520
Target Start/End: Complemental strand, 32968130 - 32967624
Alignment:
| Q |
8 |
catagcatctaataggtttgaaaaggacactgatttttgagacatgagtgtgttttgaagaggtgaggttgtgtttttggtgattggaaatagggtttct |
107 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32968130 |
catagcatctaataggtttgaaaaggacactgatttttgagacatgagtgtgttttgaagaggtgaggttgtgtttttggtgattggaaatagggtttct |
32968031 |
T |
|
| Q |
108 |
tggaattgtgtctcttctgcatgttccacttcacctaccaaagtttctgatgattctgttgaagttagtgcacattttgatttcttgtaaattcggcata |
207 |
Q |
| |
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|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32968030 |
tggaattgtgtctcttctgcatgttccacttcacctaccatagtttctgatgattctgttgaagttagtgcacattttgatttcttgtaaattcggcata |
32967931 |
T |
|
| Q |
208 |
gcacccaatcatccaactgcacaaacacaataattccaagaataacattagtctaagatacatctnnnnnnngtacgtgacactgaccacagtcaaacaa |
307 |
Q |
| |
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||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||| |
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| T |
32967930 |
gcacccaatcatccaactgcacaaatacaataattccaagaataacattagtctaagatacatctaaaaaaagtacg------tgaccacaatcaaacaa |
32967837 |
T |
|
| Q |
308 |
caacatcagagtttatgnnnnnnnnatgccgttgttcgactgtggcaaaactatggttgatattgcattagtcacatttaattgcgacgcgaccgcaatc |
407 |
Q |
| |
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||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32967836 |
caacatcagagtttatgttttttttatgccgttgttcgactgtggcaagactatgattgatattgcattagtcacatttaattgcgacgcgaccgcaatc |
32967737 |
T |
|
| Q |
408 |
taaactcaccctcatggaagaatctttgagcttaataggtttattgttgtcaagaagacgatattcatgcatgatccaattagtcttaataccctttggg |
507 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32967736 |
taaactcaccctcatggaagaatctttgagcttaataggtttattgttgtcaacaagacgatattcatgcatgatccaattagtcttaataccctttggg |
32967637 |
T |
|
| Q |
508 |
ggttttcctttgt |
520 |
Q |
| |
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||||||||||||| |
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| T |
32967636 |
ggttttcctttgt |
32967624 |
T |
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