View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5229-Insertion-24 (Length: 216)
Name: NF5229-Insertion-24
Description: NF5229
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5229-Insertion-24 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 7 - 216
Target Start/End: Complemental strand, 54013889 - 54013685
Alignment:
| Q |
7 |
aatcccacacaaattgttcaaggcatttccatttcttagatatgtgatatacacaccaacgtaagtttattaaaatttacatttacatttgtccaaaatt |
106 |
Q |
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| T |
54013889 |
aatcccacacaaattgttcaaggcatttccatttcttagatatgtgatacacacaccaacgtaagtttattaaaatttacatttacatttgtccaaaatt |
54013790 |
T |
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| Q |
107 |
tagattacagttaatgcacccttgaggttgagtaacaaaacaaagtacgaatctctcttacttacactcattacttgttcaattgtcagacacataaaat |
206 |
Q |
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| T |
54013789 |
tagattacagttaatgcacccttgaggttgagtaa-----caaagtacgaatctctcttacttacactcattacttgttcaattgtcagacacataaaat |
54013695 |
T |
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| Q |
207 |
agccccctca |
216 |
Q |
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|||||||||| |
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| T |
54013694 |
agccccctca |
54013685 |
T |
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