View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5229_low_18 (Length: 374)
Name: NF5229_low_18
Description: NF5229
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5229_low_18 |
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Alignment Details
Target: chr5 (Bit Score: 172; Significance: 2e-92; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 157 - 356
Target Start/End: Original strand, 13945916 - 13946115
Alignment:
| Q |
157 |
acgaatggaatacacttaagttttaataaccacacaacacaaaagtagtcaaccaatgaagcatgcaattggtgtctagagatgatacatggttcaatac |
256 |
Q |
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| T |
13945916 |
acgaatggaatacacttgagttttaataacctcaccacacaaaagcagtcaaccaatgaagcatgcaattggtgtctagagatgatacatggttcaatac |
13946015 |
T |
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| Q |
257 |
gagcctgagaatctaaaatgcattagagagatatgagttaccaatgagttaacgacaaaaaatacaacaatcgagatacattaatatcaagagaacgtcg |
356 |
Q |
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| T |
13946016 |
gagcctgagaatctaaaatgcattagagagatatgagttaccaatgagctaacgacaaaaaatataacaatcgagatacattaatatcaagagaatgtcg |
13946115 |
T |
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