View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5229_low_53 (Length: 239)
Name: NF5229_low_53
Description: NF5229
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5229_low_53 |
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Alignment Details
Target: chr7 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 33681037 - 33681264
Alignment:
| Q |
1 |
tttatcatggtggatatttttggatttgtctcatgggtttatgaattttgtgtgtatcatgattgatttcgccatttaaagagacataatgatacatctc |
100 |
Q |
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| T |
33681037 |
tttatcatggtggatatttttggatttgtctcatgggtttatgaattttgtgtgtatcatgattgattccgccatttaaaaagacataacgatacatctc |
33681136 |
T |
|
| Q |
101 |
attgttcatttgtctttcattcatgtgtaatttttcatatataattaaaaattaggtgttgtgtatatgttttaatcgaacattttgaatcaacatattc |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33681137 |
attgttcatttgtctttcattcatgtgtaatttttcatatataattaaaaactaggtgttgtgtatatgttttaatcgaacattttgaatcaacatattc |
33681236 |
T |
|
| Q |
201 |
atttcaaactattgtttttatggcctat |
228 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
33681237 |
atttcaaactattgtttttatggcctat |
33681264 |
T |
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