View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5232_high_1 (Length: 666)

Name: NF5232_high_1
Description: NF5232
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5232_high_1
NF5232_high_1
[»] chr2 (33 HSPs)
chr2 (88-654)||(11389687-11390253)
chr2 (88-654)||(11406348-11406914)
chr2 (1-162)||(5399685-5399847)
chr2 (1-162)||(32377584-32377746)
chr2 (13-154)||(25337873-25338014)
chr2 (1-163)||(24818442-24818604)
chr2 (1-172)||(33771117-33771289)
chr2 (9-154)||(30966359-30966504)
chr2 (1-134)||(8256642-8256776)
chr2 (1-146)||(29259504-29259650)
chr2 (1-154)||(30966806-30966960)
chr2 (16-154)||(32377783-32377921)
chr2 (1-72)||(11394650-11394721)
chr2 (9-163)||(16379062-16379216)
chr2 (1-116)||(41754405-41754521)
chr2 (9-172)||(25433914-25434077)
chr2 (9-163)||(16379518-16379672)
chr2 (1-72)||(11388303-11388375)
chr2 (9-172)||(1912649-1912812)
chr2 (11-172)||(15639861-15640022)
chr2 (13-172)||(1707170-1707329)
chr2 (25-154)||(30963139-30963268)
chr2 (1-72)||(29804798-29804870)
chr2 (13-171)||(8074021-8074179)
chr2 (12-70)||(30961843-30961901)
chr2 (13-154)||(33175087-33175226)
chr2 (11-135)||(15620025-15620149)
chr2 (58-172)||(8181219-8181333)
chr2 (9-164)||(33174628-33174782)
chr2 (12-149)||(30963601-30963738)
chr2 (108-154)||(29804871-29804917)
chr2 (94-154)||(20502174-20502234)
chr2 (13-73)||(38898869-38898929)
[»] chr6 (41 HSPs)
chr6 (194-655)||(24253253-24253714)
chr6 (195-656)||(22567113-22567574)
chr6 (1-154)||(20850437-20850591)
chr6 (1-154)||(13492448-13492603)
chr6 (1-154)||(9352178-9352332)
chr6 (1-154)||(17027407-17027561)
chr6 (10-154)||(13191389-13191533)
chr6 (1-154)||(7911994-7912148)
chr6 (1-154)||(28780226-28780380)
chr6 (1-172)||(7912426-7912598)
chr6 (9-146)||(20896571-20896709)
chr6 (1-148)||(13492905-13493054)
chr6 (15-154)||(17730985-17731124)
chr6 (1-154)||(23776557-23776710)
chr6 (12-154)||(23986193-23986335)
chr6 (9-161)||(11062410-11062562)
chr6 (9-154)||(2890715-2890860)
chr6 (12-154)||(9440733-9440875)
chr6 (1-70)||(16520084-16520154)
chr6 (9-154)||(2720439-2720584)
chr6 (9-164)||(2891160-2891314)
chr6 (9-172)||(20126040-20126203)
chr6 (9-172)||(21311640-21311803)
chr6 (1-165)||(1991669-1991834)
chr6 (19-163)||(3652658-3652802)
chr6 (11-70)||(9440269-9440328)
chr6 (1-70)||(15929698-15929768)
chr6 (8-68)||(3885052-3885112)
chr6 (9-149)||(12194453-12194592)
chr6 (105-163)||(21729612-21729670)
chr6 (96-154)||(27334305-27334363)
chr6 (96-154)||(27395045-27395103)
chr6 (1-65)||(2681181-2681246)
chr6 (89-157)||(1664012-1664080)
chr6 (81-149)||(11062026-11062094)
chr6 (9-72)||(17851043-17851106)
chr6 (13-172)||(21312100-21312259)
chr6 (97-163)||(31415956-31416021)
chr6 (9-62)||(30729807-30729860)
chr6 (9-114)||(33774918-33775023)
chr6 (9-113)||(17205463-17205567)
[»] chr7 (36 HSPs)
chr7 (9-172)||(7646540-7646703)
chr7 (1-154)||(42515660-42515814)
chr7 (1-163)||(34405458-34405621)
chr7 (1-154)||(7646354-7646508)
chr7 (1-154)||(2941633-2941787)
chr7 (1-154)||(9125075-9125229)
chr7 (1-172)||(2466040-2466211)
chr7 (1-154)||(28495970-28496124)
chr7 (1-154)||(36422368-36422521)
chr7 (1-154)||(13122380-13122535)
chr7 (1-154)||(13125011-13125166)
chr7 (1-103)||(2465849-2465952)
chr7 (1-154)||(2193372-2193526)
chr7 (1-172)||(6718933-6719104)
chr7 (9-169)||(42515217-42515377)
chr7 (13-154)||(2189273-2189414)
chr7 (1-154)||(18833402-18833556)
chr7 (1-142)||(43776178-43776320)
chr7 (9-172)||(679941-680104)
chr7 (9-154)||(28495495-28495629)
chr7 (13-170)||(3305208-3305365)
chr7 (9-172)||(29038878-29039041)
chr7 (16-164)||(22529101-22529249)
chr7 (12-139)||(5406478-5406606)
chr7 (94-172)||(36422592-36422670)
chr7 (80-154)||(43233153-43233227)
chr7 (9-120)||(35474031-35474142)
chr7 (12-70)||(1628841-1628899)
chr7 (9-164)||(2611525-2611673)
chr7 (8-77)||(46425865-46425934)
chr7 (1-68)||(20966167-20966235)
chr7 (94-169)||(6747937-6748012)
chr7 (92-172)||(26419093-26419173)
chr7 (9-162)||(25182486-25182639)
chr7 (94-154)||(7461258-7461318)
chr7 (126-162)||(33316943-33316979)
[»] chr5 (41 HSPs)
chr5 (1-162)||(2474521-2474683)
chr5 (1-164)||(17445321-17445485)
chr5 (1-154)||(34372184-34372338)
chr5 (1-148)||(189184-189332)
chr5 (15-172)||(22557100-22557258)
chr5 (1-154)||(34371728-34371882)
chr5 (9-154)||(3886933-3887078)
chr5 (1-154)||(3886477-3886631)
chr5 (1-150)||(8391202-8391352)
chr5 (15-172)||(22556667-22556825)
chr5 (1-154)||(42788522-42788676)
chr5 (1-162)||(2474075-2474227)
chr5 (1-154)||(8641911-8642064)
chr5 (12-166)||(24182110-24182264)
chr5 (9-154)||(15512888-15513033)
chr5 (1-154)||(2193932-2194074)
chr5 (9-172)||(1822031-1822194)
chr5 (8-164)||(18750062-18750218)
chr5 (11-162)||(11757149-11757300)
chr5 (9-154)||(10927279-10927424)
chr5 (13-170)||(29679967-29680124)
chr5 (14-154)||(30720136-30720276)
chr5 (1-103)||(21886073-21886176)
chr5 (9-154)||(20858418-20858562)
chr5 (13-149)||(27646716-27646852)
chr5 (14-154)||(30684887-30685027)
chr5 (12-70)||(4102924-4102982)
chr5 (12-70)||(30684516-30684574)
chr5 (9-138)||(20039367-20039496)
chr5 (1-70)||(18304547-18304617)
chr5 (9-73)||(10926903-10926967)
chr5 (107-154)||(21883961-21884008)
chr5 (7-169)||(1880199-1880361)
chr5 (1-73)||(34867906-34867979)
chr5 (12-68)||(30719767-30719823)
chr5 (9-49)||(39147064-39147104)
chr5 (26-68)||(16370673-16370715)
chr5 (14-56)||(32574632-32574674)
chr5 (58-172)||(38063687-38063800)
chr5 (80-136)||(187754-187810)
chr5 (38-70)||(2058618-2058650)
[»] scaffold0499 (1 HSPs)
scaffold0499 (1-164)||(1917-2081)
[»] chr8 (35 HSPs)
chr8 (1-172)||(17103197-17103370)
chr8 (1-172)||(10844473-10844645)
chr8 (1-162)||(25148083-25148244)
chr8 (9-162)||(27022207-27022359)
chr8 (1-154)||(22548425-22548579)
chr8 (1-154)||(22548871-22549025)
chr8 (7-148)||(34308817-34308958)
chr8 (1-164)||(12100807-12100970)
chr8 (1-154)||(12827130-12827284)
chr8 (7-154)||(34308355-34308502)
chr8 (1-154)||(25147652-25147805)
chr8 (9-172)||(31283510-31283672)
chr8 (9-170)||(8080202-8080363)
chr8 (13-162)||(21315978-21316126)
chr8 (13-154)||(41658981-41659122)
chr8 (1-172)||(27926015-27926186)
chr8 (1-154)||(22026495-22026650)
chr8 (9-138)||(32292522-32292651)
chr8 (9-148)||(2044183-2044322)
chr8 (13-164)||(30527348-30527499)
chr8 (4-154)||(6466826-6466976)
chr8 (1-69)||(25144888-25144957)
chr8 (9-138)||(33852150-33852279)
chr8 (38-154)||(32292095-32292211)
chr8 (9-154)||(41913095-41913240)
chr8 (9-162)||(28453463-28453616)
chr8 (9-145)||(3745226-3745362)
chr8 (64-164)||(6463409-6463510)
chr8 (14-67)||(15567972-15568025)
chr8 (15-162)||(25307895-25308042)
chr8 (92-154)||(9251093-9251155)
chr8 (9-68)||(6464872-6464931)
chr8 (89-172)||(6466461-6466544)
chr8 (9-170)||(15818876-15819036)
chr8 (1-44)||(10844999-10845043)
[»] scaffold0243 (1 HSPs)
scaffold0243 (1-154)||(1336-1490)
[»] chr1 (39 HSPs)
chr1 (1-154)||(20054412-20054566)
chr1 (1-154)||(20054868-20055022)
chr1 (1-154)||(20055324-20055478)
chr1 (1-154)||(20055780-20055934)
chr1 (1-154)||(20056236-20056390)
chr1 (1-154)||(20057139-20057293)
chr1 (1-154)||(20057595-20057749)
chr1 (9-154)||(16451809-16451954)
chr1 (9-154)||(16460962-16461107)
chr1 (1-154)||(20053956-20054110)
chr1 (1-154)||(20056692-20056846)
chr1 (1-154)||(20845537-20845691)
chr1 (9-148)||(50002957-50003096)
chr1 (1-154)||(38341022-38341176)
chr1 (1-154)||(52250322-52250476)
chr1 (1-154)||(52250659-52250813)
chr1 (1-154)||(52250996-52251150)
chr1 (13-154)||(46693611-46693752)
chr1 (1-154)||(20060216-20060370)
chr1 (1-154)||(35759484-35759638)
chr1 (1-154)||(51372750-51372904)
chr1 (15-164)||(50002573-50002722)
chr1 (9-154)||(43056941-43057086)
chr1 (37-154)||(7547790-7547907)
chr1 (13-154)||(7229819-7229960)
chr1 (9-138)||(43057415-43057544)
chr1 (1-69)||(50002246-50002315)
chr1 (9-149)||(23180855-23180995)
chr1 (9-172)||(35009866-35010017)
chr1 (24-70)||(8278097-8278143)
chr1 (9-71)||(35760873-35760935)
chr1 (56-148)||(31823001-31823093)
chr1 (14-73)||(7548221-7548280)
chr1 (16-70)||(16907366-16907420)
chr1 (7-148)||(2634589-2634730)
chr1 (11-72)||(31822621-31822682)
chr1 (97-162)||(49996548-49996613)
chr1 (94-154)||(35759940-35760000)
chr1 (9-49)||(12728117-12728157)
[»] chr3 (48 HSPs)
chr3 (9-154)||(50347871-50348016)
chr3 (1-162)||(8067396-8067558)
chr3 (1-154)||(13150430-13150584)
chr3 (1-162)||(39653280-39653442)
chr3 (10-154)||(14820280-14820424)
chr3 (1-154)||(16811497-16811649)
chr3 (1-154)||(31284152-31284306)
chr3 (1-154)||(27187205-27187360)
chr3 (7-172)||(37045158-37045320)
chr3 (1-154)||(11179910-11180064)
chr3 (1-154)||(32227616-32227770)
chr3 (9-154)||(13149975-13150120)
chr3 (1-149)||(28561862-28562010)
chr3 (13-154)||(32227097-32227238)
chr3 (10-162)||(14814075-14814227)
chr3 (1-172)||(16811041-16811213)
chr3 (9-154)||(32386610-32386755)
chr3 (9-148)||(20884999-20885138)
chr3 (13-170)||(4067220-4067377)
chr3 (9-172)||(25238542-25238705)
chr3 (9-164)||(25230114-25230269)
chr3 (9-164)||(25237701-25237856)
chr3 (12-70)||(29224452-29224510)
chr3 (13-154)||(53150688-53150829)
chr3 (12-164)||(7494009-7494161)
chr3 (9-163)||(30529812-30529965)
chr3 (9-154)||(25230581-25230726)
chr3 (9-154)||(25238168-25238313)
chr3 (9-78)||(41472425-41472494)
chr3 (9-78)||(41474122-41474191)
chr3 (12-164)||(7477319-7477471)
chr3 (9-162)||(25248236-25248390)
chr3 (12-156)||(15405674-15405818)
chr3 (88-164)||(25238993-25239069)
chr3 (9-72)||(39641062-39641125)
chr3 (12-70)||(15377412-15377470)
chr3 (88-154)||(41473745-41473811)
chr3 (9-70)||(2911220-2911281)
chr3 (13-70)||(3899929-3899986)
chr3 (12-156)||(15388271-15388415)
chr3 (12-156)||(15392638-15392782)
chr3 (12-70)||(15411083-15411141)
chr3 (12-70)||(15417499-15417557)
chr3 (89-138)||(18318860-18318909)
chr3 (88-164)||(2911288-2911364)
chr3 (12-64)||(15381258-15381310)
chr3 (12-64)||(15396493-15396545)
chr3 (12-64)||(15410629-15410681)
[»] scaffold0040 (1 HSPs)
scaffold0040 (8-172)||(2068-2232)
[»] scaffold0217 (1 HSPs)
scaffold0217 (1-163)||(426-589)
[»] scaffold0018 (1 HSPs)
scaffold0018 (1-163)||(10416-10578)
[»] scaffold0322 (1 HSPs)
scaffold0322 (1-154)||(19082-19236)
[»] scaffold0277 (1 HSPs)
scaffold0277 (1-154)||(14578-14732)
[»] chr4 (56 HSPs)
chr4 (8-154)||(7678492-7678638)
chr4 (1-154)||(35871743-35871897)
chr4 (9-171)||(44470728-44470890)
chr4 (1-164)||(44471185-44471349)
chr4 (1-154)||(49998752-49998906)
chr4 (9-172)||(23943094-23943257)
chr4 (9-141)||(4127772-4127904)
chr4 (9-172)||(21067856-21068019)
chr4 (10-154)||(24629306-24629447)
chr4 (10-154)||(23350153-23350297)
chr4 (10-154)||(4127288-4127432)
chr4 (1-116)||(12691907-12692023)
chr4 (1-119)||(50814730-50814849)
chr4 (11-164)||(3169333-3169486)
chr4 (9-164)||(1645609-1645764)
chr4 (9-172)||(9423710-9423873)
chr4 (10-73)||(24628928-24628991)
chr4 (12-154)||(27578327-27578469)
chr4 (1-154)||(50398408-50398562)
chr4 (9-120)||(23942693-23942804)
chr4 (1-163)||(51331144-51331305)
chr4 (1-162)||(1464263-1464424)
chr4 (24-154)||(13266226-13266356)
chr4 (9-147)||(27026627-27026765)
chr4 (14-172)||(33764990-33765148)
chr4 (39-172)||(40607086-40607219)
chr4 (10-70)||(11828439-11828499)
chr4 (24-172)||(21067422-21067570)
chr4 (14-70)||(27578240-27578296)
chr4 (9-72)||(21220283-21220346)
chr4 (12-149)||(14571563-14571700)
chr4 (8-65)||(17028998-17029055)
chr4 (59-154)||(15268043-15268138)
chr4 (1-63)||(15306052-15306115)
chr4 (11-70)||(27578863-27578922)
chr4 (17-147)||(8467690-8467815)
chr4 (8-70)||(17029454-17029516)
chr4 (1-154)||(50398864-50399017)
chr4 (98-156)||(52048545-52048603)
chr4 (97-162)||(5810047-5810112)
chr4 (7-148)||(14351918-14352059)
chr4 (13-135)||(20306051-20306175)
chr4 (80-164)||(7381463-7381547)
chr4 (12-154)||(14572024-14572163)
chr4 (8-67)||(23091468-23091527)
chr4 (12-70)||(17628639-17628697)
chr4 (107-168)||(23976074-23976135)
chr4 (38-70)||(26200247-26200279)
chr4 (9-73)||(29628619-29628683)
chr4 (94-154)||(35477870-35477930)
chr4 (107-170)||(24194612-24194675)
chr4 (16-70)||(4185847-4185901)
chr4 (13-70)||(31817806-31817863)
chr4 (12-169)||(53854702-53854859)
chr4 (88-164)||(4414247-4414323)
chr4 (9-49)||(53996090-53996130)
[»] scaffold0020 (1 HSPs)
scaffold0020 (1-149)||(107344-107493)
[»] scaffold0333 (3 HSPs)
scaffold0333 (1-172)||(5137-5308)
scaffold0333 (14-164)||(4691-4840)
scaffold0333 (107-164)||(5346-5403)
[»] scaffold0168 (1 HSPs)
scaffold0168 (1-154)||(2858-3012)
[»] scaffold0002 (2 HSPs)
scaffold0002 (9-154)||(154882-155027)
scaffold0002 (94-154)||(154512-154572)
[»] scaffold0022 (3 HSPs)
scaffold0022 (1-154)||(162553-162708)
scaffold0022 (1-154)||(163010-163164)
scaffold0022 (15-172)||(163202-163359)
[»] scaffold0389 (1 HSPs)
scaffold0389 (1-154)||(13409-13563)
[»] scaffold1519 (1 HSPs)
scaffold1519 (25-150)||(1581-1706)
[»] scaffold0024 (1 HSPs)
scaffold0024 (1-154)||(105836-105990)
[»] scaffold0047 (2 HSPs)
scaffold0047 (13-170)||(17458-17615)
scaffold0047 (9-170)||(17995-18156)
[»] scaffold0137 (1 HSPs)
scaffold0137 (12-70)||(7070-7128)
[»] scaffold0005 (2 HSPs)
scaffold0005 (12-149)||(245676-245813)
scaffold0005 (12-154)||(245213-245352)
[»] scaffold0557 (1 HSPs)
scaffold0557 (88-162)||(2300-2374)
[»] scaffold0071 (1 HSPs)
scaffold0071 (12-70)||(44681-44739)
[»] scaffold0065 (1 HSPs)
scaffold0065 (107-163)||(62974-63030)


Alignment Details
Target: chr2 (Bit Score: 523; Significance: 0; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 523; E-Value: 0
Query Start/End: Original strand, 88 - 654
Target Start/End: Original strand, 11389687 - 11390253
Alignment:
Q  88 taagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtcatctgggagtgtatgtctcttgc 187  Q
    ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  11389687 taagcatgcgagtgagaataaaacatgctgaaaaaactcatgttggtttgtggggtcagtcgacaatcctaaaagtcatctgggagtgtatgtctcttgc 11389786  T
Q  188 cgttactagacttataaggttcacattgactccaaaatcacacagggcctcaccgatgtatgtctcttccatgcacacagggagtgtataacatccttca 287  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11389787 cgttactagacttataaggttcacattgactccaaaatcacacagggcctcaccgatgtatgtctcttccatgcacacagggagtgtataacatccttca 11389886  T
Q  288 ccgtcaaacttggcggacacatgtacctcgaagttgatgcgacactctacagtaagtgatatgtagtcctcttcagatgaattcactgttgttttcagca 387  Q
    |||||||||||||||||||||||||||||||||||||||| || |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  11389887 ccgtcaaacttggcggacacatgtacctcgaagttgatgcaaccctcttcagtaactgatatgtagtcctcttcagatgaattcactgttgttttcagca 11389986  T
Q  388 gttcttgcagaaaattgatgcaacacatactttgcttcgccatttcctctactagcatataaactttgtatttttcgaggatctggtggagctccttgaa 487  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11389987 gttcttgcagaaaattgatgcaacacatactttgcttcgccatttcctctactagcatataaactttgtatttttcgaggatctggtggagctccttgaa 11390086  T
Q  488 gttttccgctacttctttctttgctggcttaatttctacctaacaagtgtcttcccctacttcaataatgttgatatgctcttcttttctagttggtttt 587  Q
    ||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11390087 gttttccgctacttctttctttgcctgcttaatttctacctgacaagtgtcttcccctacttcaataatgttgatatgctcttcttttctagttggtttt 11390186  T
Q  588 gatttatgcagctcctaccgttttagatctacttccttatgaaaatcaaggtattgtggttccttct 654  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  11390187 gatttatgcagctcctaccgttttagatctacttccttatgaaaatcaaggtattctggttccttct 11390253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 523; E-Value: 0
Query Start/End: Original strand, 88 - 654
Target Start/End: Original strand, 11406348 - 11406914
Alignment:
Q  88 taagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtcatctgggagtgtatgtctcttgc 187  Q
    ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  11406348 taagcatgcgagtgagaataaaacatgctgaaaaaactcatgttggtttgtggggtcagtcgacaatcctaaaagtcatctgggagtgtatgtctcttgc 11406447  T
Q  188 cgttactagacttataaggttcacattgactccaaaatcacacagggcctcaccgatgtatgtctcttccatgcacacagggagtgtataacatccttca 287  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11406448 cgttactagacttataaggttcacattgactccaaaatcacacagggcctcaccgatgtatgtctcttccatgcacacagggagtgtataacatccttca 11406547  T
Q  288 ccgtcaaacttggcggacacatgtacctcgaagttgatgcgacactctacagtaagtgatatgtagtcctcttcagatgaattcactgttgttttcagca 387  Q
    |||||||||||||||||||||||||||||||||||||||| || |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  11406548 ccgtcaaacttggcggacacatgtacctcgaagttgatgcaaccctcttcagtaactgatatgtagtcctcttcagatgaattcactgttgttttcagca 11406647  T
Q  388 gttcttgcagaaaattgatgcaacacatactttgcttcgccatttcctctactagcatataaactttgtatttttcgaggatctggtggagctccttgaa 487  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11406648 gttcttgcagaaaattgatgcaacacatactttgcttcgccatttcctctactagcatataaactttgtatttttcgaggatctggtggagctccttgaa 11406747  T
Q  488 gttttccgctacttctttctttgctggcttaatttctacctaacaagtgtcttcccctacttcaataatgttgatatgctcttcttttctagttggtttt 587  Q
    ||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11406748 gttttccgctacttctttctttgcctgcttaatttctacctgacaagtgtcttcccctacttcaataatgttgatatgctcttcttttctagttggtttt 11406847  T
Q  588 gatttatgcagctcctaccgttttagatctacttccttatgaaaatcaaggtattgtggttccttct 654  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  11406848 gatttatgcagctcctaccgttttagatctacttccttatgaaaatcaaggtattctggttccttct 11406914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 5399847 - 5399685
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| ||||||||||||||||| |||||||||| |||||||||||| ||||||||||||||||||||||||| || ||||||| ||||| ||||||    
T  5399847 cggtagctcattccataagaacttcatagttaagcgtgcttgacttggagaaattttgggatgggtgacctaccaggaagttttccggtaagcgtgcgag 5399748  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaag 162  Q
    |||||| ||||||||||| ||| | |  ||||||||||||||||||||||||||| |||||||    
T  5399747 tgagaacaaaacacgctggaaagacttgtgttggtttgtggggtcagtcgacaatcctaaaag 5399685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 32377746 - 32377584
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| |||||| ||||||| ||||||||||| | |||||||||||||||||||||||| ||||||||||| |||| ||||||| ||||| ||||||    
T  32377746 cggtagctcattccaaaagaactccacagttaagcatgcttgacttggagcaattttgggataggtgacctaccggaaagttttccggtaagcgtgcgag 32377647  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaag 162  Q
    |||| | ||||||||||||||||| || |||||||||||||||||||||| |||| |||||||    
T  32377646 tgaggacaaaacacgctgaaaaaactcgtgttggtttgtggggtcagtcggcaatcctaaaag 32377584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 13 - 154
Target Start/End: Complemental strand, 25338014 - 25337873
Alignment:
Q  13 cataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaaca 112  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| | || ||| ||| ||||  |||||||||| | ||||||    
T  25338014 cataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagtgtgcgagtgaggacaaaaca 25337915  T
Q  113 cgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    ||||||||| | || |||||||||||||||||||||||||||    
T  25337914 cgctgaaaagactcgtgttggtttgtggggtcagtcgacaat 25337873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 24818442 - 24818604
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| |||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||| | || ||| | | ||||| ||||||    
T  24818442 cggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgg-atgggtgacctaccgggaagtttcctggtaagcgtgcgag 24818540  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagt 163  Q
    |||| | ||||||||||||||| | || ||||||||||||||||||||||||||| || |||||    
T  24818541 tgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcgacaatgctgaaagt 24818604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 33771117 - 33771289
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| ||| |||||||||| ||||||||||| | |||||||||||||||||||||||||||||||||||| | || ||| ||| ||||||||||||    
T  33771117 cggtagctcatttcataagaactccacagttaagcatgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagcatgcgag 33771216  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtcatctggga 172  Q
    |||| | ||||||| ||||||| | || ||||||||||||||||||| || |||| || ||||  ||||||||    
T  33771217 tgaggacaaaacacactgaaaagactcgtgttggtttgtggggtcagccggcaattctgaaagcaatctggga 33771289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 9 - 154
Target Start/End: Original strand, 30966359 - 30966504
Alignment:
Q  9 attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataa 108  Q
    |||||||||||||| || |||||||||| ||||||||||| |||||||||||||||||||||||| | || |||  || |||||||||||||||| | ||    
T  30966359 attccataagaactccatagttaagcgtgcttgacttggaccaattttgggatgggtgacctaccgggaagtttctcggtaagcatgcgagtgaggacaa 30966458  T
Q  109 aacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    |||||| |||||| | || |||||||||||||||||||||| ||||    
T  30966459 aacacgttgaaaagactcgtgttggtttgtggggtcagtcggcaat 30966504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 8256642 - 8256776
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| |  | || ||||||||||||| ||||||    
T  8256642 cggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctgctgggaagttttccgataagcgtgcgag 8256741  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggt 134  Q
    |||| | |||| |||||||||| | ||||||||||    
T  8256742 tgaggacaaaatacgctgaaaagactcatgttggt 8256776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 29259650 - 29259504
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| ||| ||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||| | || ||| ||| ||||||||||||    
T  29259650 cggtagctcatttcataagaacttcatagttaagcgtgcttgactttgagcaattttgggatgggtgacctaccgggaagtttcccggtaagcatgcgag 29259551  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcag 146  Q
    |||| | |||||||| |||||| | || |||||||||||||| ||||    
T  29259550 tgaggacaaaacacgttgaaaagactcgtgttggtttgtgggatcag 29259504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 30966806 - 30966960
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| |||||||||||||| ||||||||||||| ||| |||||||||||||||||||||||||||||||| | || |||  || ||||| ||||||    
T  30966806 cggtagctcattccataagaactccacagttaagcgtgcttaacttggagcaattttgggatgggtgacctaccgggaagtttctcggtaagcgtgcgag 30966905  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    |||| | |||||||| |||||| | || ||||||||||||| |||||||| ||||    
T  30966906 tgaggacaaaacacgttgaaaagactcgtgttggtttgtggagtcagtcggcaat 30966960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 16 - 154
Target Start/End: Complemental strand, 32377921 - 32377783
Alignment:
Q  16 aagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgc 115  Q
    ||||||| |||||||||||||  ||||||||||||||||||||||||||||| ||||  | || ||||||| ||||| |||||||||| | |||||||||    
T  32377921 aagaactccacagttaagcgtgtttgacttggagcaattttgggatgggtgatctactgggaagttttccggtaagcgtgcgagtgaggacaaaacacgc 32377822  T
Q  116 tgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    |||||| | || |||||||||||||||||||||| ||||    
T  32377821 tgaaaagactcgtgttggtttgtggggtcagtcggcaat 32377783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 11394650 - 11394721
Alignment:
Q  1 cggtagctattccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctac 72  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  11394650 cggtagctattccataagaacttcacagttaagcgtgcttgacttggagcaattttgggatgggtgacctac 11394721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 9 - 163
Target Start/End: Original strand, 16379062 - 16379216
Alignment:
Q  9 attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataa 108  Q
    |||||||||||||| ||||||||||||| |||||||||||| | | || |||||||||||||| | | || ||| | | ||||| |||||||||| | ||    
T  16379062 attccataagaactccacagttaagcgtgcttgacttggagtagtctttggatgggtgacctatcgggaagtttccgggtaagcgtgcgagtgaggacaa 16379161  T
Q  109 aacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagt 163  Q
    ||||||||||||| | || ||||||||||| ||||||||||||||| || |||||    
T  16379162 aacacgctgaaaagactcgtgttggtttgtagggtcagtcgacaatgcttaaagt 16379216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 41754405 - 41754521
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||| |||| ||| ||| ||| | ||||||    
T  41754405 cggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatggatgacctaccggaaagtttcccggtaaacgtgcgag 41754504  T
Q  100 tgagaataaaacacgct 116  Q
    |||| | ||||||||||    
T  41754505 tgaggacaaaacacgct 41754521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 9 - 172
Target Start/End: Complemental strand, 25434077 - 25433914
Alignment:
Q  9 attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataa 108  Q
    |||||||||||||| ||||||||||||| ||||||||||||   | || |||||||||||| ||  | || ||||| | ||||| || |||| || | ||    
T  25434077 attccataagaactccacagttaagcgtgcttgacttggagtggtctttggatgggtgaccaacagggaagttttctggtaagcgtgtgagtaaggacaa 25433978  T
Q  109 aacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtcatctggga 172  Q
    ||||||||||||| |||| ||||||||||| |||||||||| |||| || ||||||||||||||    
T  25433977 aacacgctgaaaagattcgtgttggtttgtagggtcagtcggcaatgcttaaagtcatctggga 25433914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 9 - 163
Target Start/End: Original strand, 16379518 - 16379672
Alignment:
Q  9 attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataa 108  Q
    |||||||||||||| |||||||||||||  ||||||||||| ||| || |||||||||||||||| | || |||  |  ||||| |||||||||| | ||    
T  16379518 attccataagaactccacagttaagcgtgtttgacttggagtaatctttggatgggtgacctaccgggaagtttcactgtaagcgtgcgagtgaggacaa 16379617  T
Q  109 aacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagt 163  Q
    ||||||||||||| | || ||||||||||| |||||| |||||||| || |||||    
T  16379618 aacacgctgaaaagactcgtgttggtttgtagggtcattcgacaatgcttaaagt 16379672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 11388303 - 11388375
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctac 72  Q
    |||||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  11388303 cggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctac 11388375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 9 - 172
Target Start/End: Original strand, 1912649 - 1912812
Alignment:
Q  9 attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataa 108  Q
    |||||||||||||| |||||||||||||  ||||||||||| | | || |||||||| ||||||| | || |||  || ||||| |||||||||| | ||    
T  1912649 attccataagaactccacagttaagcgtgattgacttggagtactctttggatgggttacctaccgggaagtttctcggtaagcgtgcgagtgaggacaa 1912748  T
Q  109 aacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtcatctggga 172  Q
    |||||| |||||| | || ||||||||||| | |||||||| |||| || |||||| |||||||    
T  1912749 aacacgttgaaaagactcgtgttggtttgtagagtcagtcggcaatgcttaaagtcgtctggga 1912812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 11 - 172
Target Start/End: Original strand, 15639861 - 15640022
Alignment:
Q  11 tccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaa 110  Q
    |||| ||||||| |||| |||||||| |||||||||||| | | || |||||||||||||||  | || |||  |||||||| |||||||||| | ||||    
T  15639861 tccacaagaactccacaattaagcgtgcttgacttggagtagtctttggatgggtgacctactgggaagtttctcgataagcgtgcgagtgaggacaaaa 15639960  T
Q  111 cacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtcatctggga 172  Q
    ||||| ||||| | || |||||||| || |||||||||| |||| || |||||| |||||||    
T  15639961 cacgcagaaaagactcgtgttggttggtagggtcagtcggcaatgcttaaagtcgtctggga 15640022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 13 - 172
Target Start/End: Original strand, 1707170 - 1707329
Alignment:
Q  13 cataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaaca 112  Q
    |||||||||| |||||||||| ||  |||||||| || | | || |||||||||||||||||| || ||| ||| ||||| |||||||||  | ||||||    
T  1707170 cataagaactccacagttaagagtgtttgacttgaagtagtctttggatgggtgacctaccaggaagtttcccggtaagcgtgcgagtgaatacaaaaca 1707269  T
Q  113 cgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtcatctggga 172  Q
    |||| |||| ||||  |||| ||| | |||||||||| |||| || |||||| |||||||    
T  1707270 cgctaaaaagattcgcgttgatttatagggtcagtcggcaatgcttaaagtcgtctggga 1707329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 25 - 154
Target Start/End: Complemental strand, 30963268 - 30963139
Alignment:
Q  25 acagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaat 124  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||| |  | || |||  ||  |||| |||||||||| |||||| ||| |||||| |     
T  30963268 acagttaagcgtgcttgacttggagcaattttgggatgagtgaccttcttggaagtttctcggaaagcgtgcgagtgaggataaaatacgttgaaaagac 30963169  T
Q  125 tcatgttggtttgtggggtcagtcgacaat 154  Q
    || |||||||||||| ||||| ||| ||||    
T  30963168 tcgtgttggtttgtgaggtcaatcggcaat 30963139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 29804798 - 29804870
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctac 72  Q
    |||||||| |||||||||||||| ||||||||||||| ||||||||| |||||||||||||||  ||||||||    
T  29804798 cggtagctcattccataagaactccacagttaagcgtgcttgacttgaagcaattttgggatgtttgacctac 29804870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 13 - 171
Target Start/End: Original strand, 8074021 - 8074179
Alignment:
Q  13 cataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaaca 112  Q
    |||||||||| || || ||||| | ||||||||||   |||||||||||| ||||||| ||||||| |||  ||| |||  || || |||||| ||||||    
T  8074021 cataagaactccatagataagccttcttgacttggttaaattttgggatgagtgaccttccagaaagtttctcgaaaagtgtgtgattgagaacaaaaca 8074120  T
Q  113 cgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtcatctggg 171  Q
    || |||||||| |  |||| ||||||||| ||||||||||||  | ||||| |||||||    
T  8074121 cgatgaaaaaacttgtgtttgtttgtgggatcagtcgacaatcttgaaagttatctggg 8074179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 30961901 - 30961843
Alignment:
Q  12 ccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacct 70  Q
    ||||||||||| ||||||||| ||| |||||||| ||||||||||||||||||||||||    
T  30961901 ccataagaactccacagttaaacgtgcttgacttagagcaattttgggatgggtgacct 30961843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 154
Target Start/End: Original strand, 33175087 - 33175226
Alignment:
Q  13 cataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaaca 112  Q
    |||||||||| |||||||||||||  ||||||||||| | | ||  ||||||||||||||| | |||||  ||| ||||| |||||||||| | ||||||    
T  33175087 cataagaactccacagttaagcgtg-ttgacttggagtattcttatgatgggtgacctaccgggaaattc-ccggtaagcgtgcgagtgaggacaaaaca 33175184  T
Q  113 cgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    ||||| ||| | || |||| |||||| |||||||||| ||||    
T  33175185 cgctggaaagactcgtgttagtttgtagggtcagtcggcaat 33175226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 135
Target Start/End: Original strand, 15620025 - 15620149
Alignment:
Q  11 tccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaa 110  Q
    |||||||||||| |||| |||||||| |||||||| ||| | | || |||||||||||||||  | || |||  || ||||| |||||||||| | ||||    
T  15620025 tccataagaactccacaattaagcgtgcttgactttgagtagtctttggatgggtgacctactgggaagtttctcggtaagcgtgcgagtgaggacaaaa 15620124  T
Q  111 cacgctgaaaaaattcatgttggtt 135  Q
    | ||||||||| | || ||||||||    
T  15620125 ctcgctgaaaagactcgtgttggtt 15620149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 58 - 172
Target Start/End: Complemental strand, 8181333 - 8181219
Alignment:
Q  58 ggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatac- 156  Q
    |||||||||||||||  | || ||||||||||| | ||| |||||| | ||||||||||||||| | || ||||||||||   |||||||||||||| |     
T  8181333 ggatgggtgacctactgggaagttttccgataaacgtgcaagtgaggacaaaacacgctgaaaagactcgtgttggtttg-caggtcagtcgacaatgct 8181235  T
Q  157 taaaagtcatctggga 172  Q
    |||||||| |||||||    
T  8181234 taaaagtcgtctggga 8181219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 9 - 164
Target Start/End: Original strand, 33174628 - 33174782
Alignment:
Q  9 attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataa 108  Q
    |||||||||||||| | ||||||||||| |||||||||||| | | ||  |||||||||| |||| | ||| || ||| ||||| ||||||| || | ||    
T  33174628 attccataagaactccgcagttaagcgtgcttgacttggagtagtcttatgatgggtgacataccgggaaa-ttcccggtaagcgtgcgagttaggaaaa 33174726  T
Q  109 aacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtc 164  Q
    |||| |||  ||| |  | |||| |||||| ||||||||||||||| || ||||||    
T  33174727 aacatgctagaaagacccgtgtttgtttgtagggtcagtcgacaatgcttaaagtc 33174782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 149
Target Start/End: Complemental strand, 30963738 - 30963601
Alignment:
Q  12 ccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaac 111  Q
    |||||| |||| ||||||||||||| |||||||||| | | ||||||||| |||||||| | || || |||  ||  || | |||||||||| | |||||    
T  30963738 ccataataactccacagttaagcgtgcttgacttggcggagttttgggataggtgaccttctaggaagtttgtcggaaaccgtgcgagtgaggacaaaac 30963639  T
Q  112 acgctgaaaaaattcatgttggtttgtggggtcagtcg 149  Q
    ||  |||||| | || | |||||||||||| |||||||    
T  30963638 acagtgaaaagactcgttttggtttgtgggatcagtcg 30963601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 108 - 154
Target Start/End: Original strand, 29804871 - 29804917
Alignment:
Q  108 aaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    |||||||||||||| | || |||||||||||||| ||||||||||||    
T  29804871 aaacacgctgaaaagactcgtgttggtttgtgggatcagtcgacaat 29804917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 94 - 154
Target Start/End: Original strand, 20502174 - 20502234
Alignment:
Q  94 tgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    |||||||||| | ||||||||||||||| | || |||| |||||| |||||||||| ||||    
T  20502174 tgcgagtgaggacaaaacacgctgaaaagactcgtgttagtttgtagggtcagtcggcaat 20502234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 38898929 - 38898869
Alignment:
Q  13 cataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctacc 73  Q
    |||||||||| ||||||||||||| |||||||| ||| | | || |||| |||||||||||    
T  38898929 cataagaactccacagttaagcgtgcttgacttagagtagtctttggataggtgacctacc 38898869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 198; Significance: 1e-107; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 194 - 655
Target Start/End: Complemental strand, 24253714 - 24253253
Alignment:
Q  194 tagacttataaggttcacattgactccaaaatcacacagggcctcaccgatgtatgtctcttccatgcacacagggagtgtataacatccttcaccgtca 293  Q
    |||||| ||||||||| ||||  ||||  ||||||| | | | ||||||||||||||||| || ||| |||||||||||||||| ||||||||||| |||    
T  24253714 tagactcataaggttcgcatttgctccggaatcacataagccttcaccgatgtatgtctcctctatgtacacagggagtgtatagcatccttcaccatca 24253615  T
Q  294 aacttggcggacacatgtacctcgaagttgatgcgacactctacagtaagtgatatgtagtcctcttcagatgaattcactgttgttttcagcagttctt 393  Q
    ||| || |||   || |||||||||||||||||||||||||| ||||||||| |||||||||||| |||||||||| || |||||||||||||| |||||    
T  24253614 aacctgacggttgcaggtacctcgaagttgatgcgacactcttcagtaagtgttatgtagtcctcctcagatgaatccattgttgttttcagcaattctt 24253515  T
Q  394 gcagaaaattgatgcaacacatactttgcttcgccatttcctctactagcatataaactttgtatttttcgaggatctggtggagctccttgaagttttc 493  Q
    |||||||||||||||| |||  ||||||||||||||||||||||  | |||||| ||||| ||| ||||||||||||||||| ||||||||||| | |||    
T  24253514 gcagaaaattgatgcagcacggactttgcttcgccatttcctcttttggcatatgaacttggtacttttcgaggatctggtgaagctccttgaattcttc 24253415  T
Q  494 cgctacttctttctttgctggcttaatttctacctaacaagtgtcttcccctacttcaataatgttgatatgctcttcttttctagttggttttgattta 593  Q
     |||||||||||||||||| ||||| ||| | ||| || ||||||||||||||||||||||  |||||||||||||| ||||| |||||||||||  |      
T  24253414 agctacttctttctttgcttgcttagtttgtgcctgacgagtgtcttcccctacttcaatagcgttgatatgctcttattttccagttggttttggctcc 24253315  T
Q  594 tgcagctcctaccgttttagatctacttccttatgaaaatcaaggtattgtggttccttctc 655  Q
    ||| |||||| ||| ||  |||||| |||||| ||||| || ||||||  ||||||| ||||    
T  24253314 tgcggctcctgccgcttacgatctatttccttctgaaactcgaggtatcctggttccatctc 24253253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 195 - 656
Target Start/End: Complemental strand, 22567574 - 22567113
Alignment:
Q  195 agacttataaggttcacattgactccaaaatcacacagggcctcaccgatgtatgtctcttccatgcacacagggagtgtataacatccttcaccgtcaa 294  Q
    ||||| || |||||||||||| ||||  ||||||||||||||||||||||||||||||| || ||||||||| ||||| |||||||||||||||| |  |    
T  22567574 agactcattaggttcacattggctccggaatcacacagggcctcaccgatgtatgtctcctctatgcacacaaggagtatataacatccttcaccattga 22567475  T
Q  295 acttggcggacacatgtacctcgaagttgatgcgacactctacagtaagtgatatgtagtcctcttcagatgaattcactgttgttttcagcagttcttg 394  Q
    ||||| |||    | | ||||||||||| ||| |||||||| |||||||||||| |||||||||  |||||||||  | || ||||||||| |||||||     
T  22567474 acttgacggttgtaagaacctcgaagttaatgtgacactcttcagtaagtgatacgtagtcctccgcagatgaatcaattgctgttttcagtagttctta 22567375  T
Q  395 cagaaaattgatgcaacacatactttgcttcgccatttcctctactagcatataaactttgtatttttcgaggatctggtggagctccttgaagttttcc 494  Q
     ||||| ||||||   ||   ||||||||||  |||||||| ||||   |||| ||||| ||||||||||||||||||||| ||||||||||| |  ||     
T  22567374 tagaaagttgatgttgcatggactttgcttcatcatttcctttactgtgatatgaacttggtatttttcgaggatctggtgaagctccttgaactcgtca 22567275  T
Q  495 gctacttctttctttgctggcttaatttctacctaacaagtgtcttcccctacttcaataatgttgatatgctcttcttttctagttggttttgatttat 594  Q
     ||| ||||||||||||   |||||||||| |||  | ||||||||||||||||||||||   ||||| ||||| ||||||| ||||||||||||||| |    
T  22567274 tctaattctttctttgcctacttaatttctgcctggcgagtgtcttcccctacttcaatagcattgatctgctcatcttttccagttggttttgatttct 22567175  T
Q  595 gcagctcctaccgttttagatctacttccttatgaaaatcaaggtattgtggttccttctct 656  Q
    ||||||||| | | || |||||||||||||| ||||| || ||||||  |||||||||||||    
T  22567174 gcagctcctgctgcttgagatctacttccttctgaaactcgaggtatcttggttccttctct 22567113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 20850437 - 20850591
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| ||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||||||||| | || ||| ||| ||||| ||||||    
T  20850437 cggtagctcattccataagaactctacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagcgtgcgag 20850536  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    |||| | ||||||||||||||| | || |||||||||||||||||||||| ||||    
T  20850537 tgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaat 20850591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 13492448 - 13492603
Alignment:
Q  1 cggtagcta-ttccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    ||||||||| ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| | || ||| ||  ||||| ||||||    
T  13492448 cggtagctaattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccagtaagcgtgcgag 13492547  T
Q  100 tga-gaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    ||| ||| ||||||||||||||| | || |||||||||||||||||||||| ||||    
T  13492548 tgaggaaaaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaat 13492603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 9352178 - 9352332
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| | || |||  || ||||| ||||||    
T  9352178 cggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctacctggaagtttctcggtaagcgtgcgag 9352277  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    |||| | |||||| |||||||| | || |||||||||||||||||||||| ||||    
T  9352278 tgaggacaaaacatgctgaaaagactcgtgttggtttgtggggtcagtcggcaat 9352332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 17027561 - 17027407
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| ||| |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| | || ||| ||| ||||| || |||    
T  17027561 cggtagctcatttcataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagcgtgtgag 17027462  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    |||| | ||||||||||||||| | || |||||||||||||||||||||| ||||    
T  17027461 tgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaat 17027407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 10 - 154
Target Start/End: Complemental strand, 13191533 - 13191389
Alignment:
Q  10 ttccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaa 109  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||| | || ||| ||||||||| |||||||||| | |||    
T  13191533 ttccataagaacttcacagttaagcgtgcttgacttggagcaattttgagatgggtgaccaaccgggaagtttcccgataagcgtgcgagtgaggacaaa 13191434  T
Q  110 acacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    | || ||||||| | || |||||||||||||||||||||| ||||    
T  13191433 atacactgaaaagactcgtgttggtttgtggggtcagtcggcaat 13191389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 7911994 - 7912148
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| |||||||||||||| |||||||| || | |||||||||||||||||||||||||||||||||||| | ||  ||  || ||||||||||||    
T  7911994 cggtagctcattccataagaactccacagttatgcttgcttgacttggagcaattttgggatgggtgacctaccgggaagattctcggtaagcatgcgag 7912093  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    |||| | ||||||||||||||| | |  |||||||||||||||||||||||||||    
T  7912094 tgaggacaaaacacgctgaaaagacttgtgttggtttgtggggtcagtcgacaat 7912148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 28780226 - 28780380
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| | || ||||| | ||||  ||||||    
T  28780226 cggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagttttctggtaagtgtgcgag 28780325  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    |||| ||||||||   |||||| | || ||||||||||||||||||| |||||||    
T  28780326 tgaggataaaacattttgaaaagactcgtgttggtttgtggggtcagccgacaat 28780380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 7912426 - 7912598
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| |||||||||||||| || |||||| ||| ||||||||||||||||||||| ||||||||||| |  | || ||| ||| ||||| | ||||    
T  7912426 cggtagctcattccataagaactccatagttaaacgtgcttgacttggagcaattttggaatgggtgacctgctgggaagtttcccgttaagcgtacgag 7912525  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtcatctggga 172  Q
    |||| | ||||||||||||||| | ||||||||||||||||||| ||||| |||| || ||||  ||||||||    
T  7912526 tgaggacaaaacacgctgaaaagactcatgttggtttgtggggttagtcggcaatcctgaaagcaatctggga 7912598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 9 - 146
Target Start/End: Complemental strand, 20896709 - 20896571
Alignment:
Q  9 attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtga-gaata 107  Q
    |||||||||||||| ||| ||||||||| |||| ||||||||||||||||||||||||||||||| | |||||| ||| ||||  ||||||||| ||  |    
T  20896709 attccataagaactccacggttaagcgtgcttggcttggagcaattttgggatgggtgacctaccgggaaatttcccggtaagtgtgcgagtgaggagaa 20896610  T
Q  108 aaacacgctgaaaaaattcatgttggtttgtggggtcag 146  Q
    |||||| ||||||| | || |||||||||||||||||||    
T  20896609 aaacacactgaaaagactcgtgttggtttgtggggtcag 20896571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 13492905 - 13493054
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| |||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||||||||||| |||| ||  ||| ||||| ||||||    
T  13492905 cggtagctcattccataagaactccacagttaagcgtgcttgacttagagcaattttgggatgggtgacctaccggaaagttacccggtaagcgtgcgag 13493004  T
Q  100 tga-gaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtc 148  Q
    ||| ||  |||||| |||||||| | || ||||| ||||| |||||||||    
T  13493005 tgaggacaaaaacatgctgaaaagactcgtgttgatttgtagggtcagtc 13493054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 15 - 154
Target Start/End: Complemental strand, 17731124 - 17730985
Alignment:
Q  15 taagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacg 114  Q
    |||||||| |||| |||||||| |||||||||||||||||||| ||| ||||||||||| |||| |||  || ||||| ||| |||||| | ||||||||    
T  17731124 taagaactccacatttaagcgtgcttgacttggagcaattttgagataggtgacctaccggaaagtttatcggtaagcgtgcaagtgaggacaaaacacg 17731025  T
Q  115 ctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    || |||| | || ||||||||||| |||||||||||||||    
T  17731024 ctaaaaagactcgtgttggtttgtagggtcagtcgacaat 17730985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 23776557 - 23776710
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||  | || ||| |   ||| | ||||||    
T  23776557 cggtagctcatttcataagaacttcaca-ttaagcgtacttgacttggagcaattttgggatggatgacctactgggaagtttcctagtaaacgtgcgag 23776655  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    |||  | ||||||||||||||| |||| ||||||||||||| |||||||| ||||    
T  23776656 tgacgacaaaacacgctgaaaagattcgtgttggtttgtggagtcagtcggcaat 23776710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 12 - 154
Target Start/End: Complemental strand, 23986335 - 23986193
Alignment:
Q  12 ccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaac 111  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| |  | || |||  ||  |||| |||||||||| | || ||    
T  23986335 ccataagaacttcacagttaagtgtgcttgacttggagcaattttgggatgggtgaccttctgggaagtttcacggaaagcgtgcgagtgaggagaagac 23986236  T
Q  112 acgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    |||||||||| | |  |||||||||||||||||||||| ||||    
T  23986235 acgctgaaaagacttgtgttggtttgtggggtcagtcggcaat 23986193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 9 - 161
Target Start/End: Original strand, 11062410 - 11062562
Alignment:
Q  9 attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataa 108  Q
    |||||||||||||| ||||||||||||| |||||||||||| | | || |||||||||||||| | |||| ||| ||||||| |  | ||||||| | ||    
T  11062410 attccataagaactccacagttaagcgtgcttgacttggagtagtctttggatgggtgacctatcggaaagtttcccgataaacccgtgagtgaggacaa 11062509  T
Q  109 aacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaa 161  Q
    |||||||||||||||||  ||||| ||| | | |||||||| |||| ||||||    
T  11062510 aacacgctgaaaaaatttgtgttgatttatagagtcagtcggcaatcctaaaa 11062562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 9 - 154
Target Start/End: Complemental strand, 2890860 - 2890715
Alignment:
Q  9 attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataa 108  Q
    |||||||||||||| ||||||||||||| ||||||||| |  | |  | |||||||||||||||    || ||| ||||||||| |||||||||| | ||    
T  2890860 attccataagaactccacagttaagcgtgcttgacttgaaatagtactaggatgggtgacctactgagaagtttcccgataagcgtgcgagtgaggacaa 2890761  T
Q  109 aacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    |||||||| |||| | || ||||||||||| |||||||||||||||    
T  2890760 aacacgctaaaaagactcgtgttggtttgtagggtcagtcgacaat 2890715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 12 - 154
Target Start/End: Complemental strand, 9440875 - 9440733
Alignment:
Q  12 ccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaac 111  Q
    |||||||||||||||||||||| ||  ||||||| |||||||||||||||||||||||| |  | || ||| |||| ||   ||| |||||  | ||||     
T  9440875 ccataagaacttcacagttaagtgtgtttgactttgagcaattttgggatgggtgaccttcttggaagtttcccgaaaaatgtgcaagtgatgacaaaat 9440776  T
Q  112 acgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    |||||||||||| || || ||||||||||||||||||| ||||    
T  9440775 acgctgaaaaaactcgtgctggtttgtggggtcagtcggcaat 9440733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 16520084 - 16520154
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacct 70  Q
    |||||||| |||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||    
T  16520084 cggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgagatgggtgacct 16520154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 9 - 154
Target Start/End: Complemental strand, 2720584 - 2720439
Alignment:
Q  9 attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataa 108  Q
    |||||||||||||| |||||||||| || |||||||||||| | | || ||||||||||| ||   | || ||| ||||||||| |||||||||||| ||    
T  2720584 attccataagaactccacagttaagtgtgcttgacttggagtagtctttggatgggtgacatattgggaagtttcccgataagcgtgcgagtgagaacaa 2720485  T
Q  109 aacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    |||||||||| || | || ||| ||||||  |||||||||| ||||    
T  2720484 aacacgctgagaagactcgtgtcggtttgcagggtcagtcggcaat 2720439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 9 - 164
Target Start/End: Complemental strand, 2891314 - 2891160
Alignment:
Q  9 attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataa 108  Q
    ||||||||| |||| |||||||||  || ||||| |||||| | | || ||||||||||||||| |  |  ||| ||| ||||| |||||||||| | ||    
T  2891314 attccataaaaactccacagttaaatgtgcttgatttggagtagtctttggatgggtgacctactacgatgttt-ccggtaagcgtgcgagtgaggacaa 2891216  T
Q  109 aacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtc 164  Q
    ||||||||||||| |||| ||||||||||| |||||||||| |||| || ||||||    
T  2891215 aacacgctgaaaagattcgtgttggtttgtagggtcagtcggcaatgcttaaagtc 2891160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 9 - 172
Target Start/End: Complemental strand, 20126203 - 20126040
Alignment:
Q  9 attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataa 108  Q
    |||||||||||| | |||| |||||||| |||||||||||| | | || | ||||| ||||||||   || ||| ||  ||||| |||||||||| | ||    
T  20126203 attccataagaattccacaattaagcgtgcttgacttggagtagtctttgaatgggcgacctacctagaagtttcccagtaagcgtgcgagtgaggacaa 20126104  T
Q  109 aacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtcatctggga 172  Q
    ||||| ||||||| | || ||||||||||| ||||| ||||||||| || |||||| |||||||    
T  20126103 aacacactgaaaagactcgtgttggtttgtagggtccgtcgacaatgcttaaagtcgtctggga 20126040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 9 - 172
Target Start/End: Original strand, 21311640 - 21311803
Alignment:
Q  9 attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataa 108  Q
    |||||||||||||| | ||||||||||| |||||||| ||| | | ||  ||||||||||||||| | |  ||||||| ||||  |||||||||  | ||    
T  21311640 attccataagaactccgcagttaagcgtgcttgactttgagtagtcttatgatgggtgacctaccgggatgttttccggtaagtgtgcgagtgaagacaa 21311739  T
Q  109 aacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtcatctggga 172  Q
    ||||||||| ||  | || ||||||||||| |||||| |||||||| || |||||| |||||||    
T  21311740 aacacgctgtaaggactcgtgttggtttgtagggtcaatcgacaatgcttaaagtcgtctggga 21311803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 1991669 - 1991834
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| ||| |||||||||||||||||||| | |  |||| |||||| | |||| ||||||||||||| |   ||| |||||||| ||||||| |||    
T  1991669 cggtagctcatttcataagaacttcacagttaaacattattgatttggagtagtttttggatgggtgaccttctgaaaagttttccgaaaagcatgtgag 1991768  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtca 165  Q
    |||  | |||  |||||||||||| || ||||| |||||||| |||||| |||||| | |||||||    
T  1991769 tgaagacaaagtacgctgaaaaaactcgtgttgatttgtgggatcagtcaacaatatttaaagtca 1991834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 19 - 163
Target Start/End: Original strand, 3652658 - 3652802
Alignment:
Q  19 aacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctga 118  Q
    |||| ||||||||||| | |||||||||||| | | || |||||||||||||||| | ||  || ||| ||||| |||||||||| | |||| | |||||    
T  3652658 aactccacagttaagcttgcttgacttggagtagtctttggatgggtgacctaccgggaagcttcccggtaagcgtgcgagtgaggacaaaaaaagctga 3652757  T
Q  119 aaaaattcatgttggtttgtggggtcagtcgacaatactaaaagt 163  Q
    ||| | || ||||||||||| |||||||| |||||| || |||||    
T  3652758 aaagactcttgttggtttgtagggtcagttgacaatgcttaaagt 3652802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 11 - 70
Target Start/End: Complemental strand, 9440328 - 9440269
Alignment:
Q  11 tccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacct 70  Q
    ||||||||||||||||||||||| || ||||| ||||||||||||| |||||||||||||    
T  9440328 tccataagaacttcacagttaagtgtgcttgatttggagcaatttttggatgggtgacct 9440269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 15929698 - 15929768
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacct 70  Q
    |||||||| |||||||||||||| |||||||||||||  || || || |||||||||||||||||||||||    
T  15929698 cggtagctcattccataagaactccacagttaagcgtgtttaacatgaagcaattttgggatgggtgacct 15929768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 3885112 - 3885052
Alignment:
Q  8 tattccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgac 68  Q
    |||||||||||||||||| |||| | ||| |||||||||||||||||||| ||| ||||||    
T  3885112 tattccataagaacttcaaagttgaacgtgcttgacttggagcaattttgagataggtgac 3885052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 12194453 - 12194592
Alignment:
Q  9 attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataa 108  Q
    |||||||||||||| ||||||||||| |  ||||| |||||||||||| |||||| ||||||   ||||| ||||||   || | || ||||  | | ||    
T  12194453 attccataagaactccacagttaagcatgtttgacatggagcaattttaggatggatgaccttttagaaagttttccagaaaacgtgtgagtttggacaa 12194552  T
Q  109 aacacgctgaaaaaattcatgttggtttgtggggtcagtcg 149  Q
    ||||| ||||||| | |||||||||||| ||||||||||||    
T  12194553 aacacactgaaaagactcatgttggttt-tggggtcagtcg 12194592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 105 - 163
Target Start/End: Complemental strand, 21729670 - 21729612
Alignment:
Q  105 ataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagt 163  Q
    ||||||||||||||||| |||||||||||||||   ||||||||| ||||||| |||||    
T  21729670 ataaaacacgctgaaaatattcatgttggtttggcaggtcagtcgtcaatacttaaagt 21729612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 96 - 154
Target Start/End: Original strand, 27334305 - 27334363
Alignment:
Q  96 cgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    |||||||| | ||||||||||||||| | || ||||| |||||||||||||||||||||    
T  27334305 cgagtgaggacaaaacacgctgaaaagactcgtgttgatttgtggggtcagtcgacaat 27334363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 96 - 154
Target Start/End: Original strand, 27395045 - 27395103
Alignment:
Q  96 cgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    |||||||| | ||||||||||||||| | || ||||| |||||||||||||||||||||    
T  27395045 cgagtgaggacaaaacacgctgaaaagactcgtgttgatttgtggggtcagtcgacaat 27395103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 2681246 - 2681181
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggt 65  Q
    |||||||| |||||||||||||| |||| |||||||| ||| | ||||| ||||||||||||||||    
T  2681246 cggtagctcattccataagaactccacaattaagcgtgcttaatttggaacaattttgggatgggt 2681181  T

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Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 89 - 157
Target Start/End: Original strand, 1664012 - 1664080
Alignment:
Q  89 aagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatact 157  Q
    |||| |||||||||||| |||| | ||| |||| ||||||||||||||||  ||||| |||||||||||    
T  1664012 aagcgtgcgagtgagaacaaaatatgctaaaaagattcatgttggtttgtctggtcaatcgacaatact 1664080  T

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Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 81 - 149
Target Start/End: Original strand, 11062026 - 11062094
Alignment:
Q  81 tttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcg 149  Q
    |||||| ||||| |||||||||| | |||||||||| |||||| || ||||||||||| |||| |||||    
T  11062026 tttccggtaagcgtgcgagtgaggacaaaacacgctaaaaaaactcgtgttggtttgtagggttagtcg 11062094  T

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Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 72
Target Start/End: Original strand, 17851043 - 17851106
Alignment:
Q  9 attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctac 72  Q
    |||| ||||||||| ||||||||||||| |||||||||||| | | || ||||||| |||||||    
T  17851043 attctataagaactccacagttaagcgtgcttgacttggagtagtcttcggatgggagacctac 17851106  T

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Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 172
Target Start/End: Original strand, 21312100 - 21312259
Alignment:
Q  13 cataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaaca 112  Q
    |||||||| | || |||||| ||| |||||||||||||| | ||  |||| |||||||||| | || ||| ||| ||||  ||  |||||  | ||||||    
T  21312100 cataagaaatccatagttaaacgtgcttgacttggagcagtcttatgatgagtgacctaccgggaagtttcccggtaagtgtgtaagtgaagacaaaaca 21312199  T
Q  113 cgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtcatctggga 172  Q
    |  |||||| | |  ||||||||||| ||||||||||||||| || |||||| |||||||    
T  21312200 cattgaaaagactggtgttggtttgtagggtcagtcgacaatgcttaaagtcgtctggga 21312259  T

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Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 97 - 163
Target Start/End: Complemental strand, 31416021 - 31415956
Alignment:
Q  97 gagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagt 163  Q
    ||||||| | ||||||||||||||| || | |||||||||||||| ||||||| ||||||| |||||    
T  31416021 gagtgaggacaaaacacgctgaaaagat-cgtgttggtttgtgggatcagtcggcaatacttaaagt 31415956  T

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Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 30729860 - 30729807
Alignment:
Q  9 attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatg 62  Q
    |||| |||||||||| | |||||||||| ||||| || ||||||||||||||||    
T  30729860 attctataagaactttatagttaagcgttcttgaatttgagcaattttgggatg 30729807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 114
Target Start/End: Complemental strand, 33775023 - 33774918
Alignment:
Q  9 attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataa 108  Q
    |||||||||||||| |||||||||| ||  |||||||| || | | || |||||||||||||||    || |||| || ||||| |||||||||| | ||    
T  33775023 attccataagaactccacagttaagtgtgtttgacttgcagtagtctttggatgggtgacctactgagaagtttttcggtaagcgtgcgagtgaggaaaa 33774924  T
Q  109 aacacg 114  Q
    ||||||    
T  33774923 aacacg 33774918  T

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Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 9 - 113
Target Start/End: Original strand, 17205463 - 17205567
Alignment:
Q  9 attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataa 108  Q
    |||||||||||||| ||  ||||| | | ||||| |||||| |||||||||||||| |||||    |||| |||| ||  || |||||||||||||| ||    
T  17205463 attccataagaactccattgttaaacatgcttgatttggagtaattttgggatgggagacctttatgaaagtttttcggaaaacatgcgagtgagaacaa 17205562  T
Q  109 aacac 113  Q
    |||||    
T  17205563 aacac 17205567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 108; Significance: 7e-54; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 9 - 172
Target Start/End: Original strand, 7646540 - 7646703
Alignment:
Q  9 attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataa 108  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| |||| ||||||||||||| |||||||||| | ||    
T  7646540 attccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccggaaagttttccgataagcgtgcgagtgaggacaa 7646639  T
Q  109 aacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtcatctggga 172  Q
    ||||| ||||||| | || |||||||||||||||| |||||||||| ||||||||| |||||||    
T  7646640 aacacactgaaaagactcgtgttggtttgtggggttagtcgacaatcctaaaagtcgtctggga 7646703  T

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Target: chr7; HSP #2
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 42515660 - 42515814
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||  | |||||||||| ||||| ||||||    
T  42515660 cggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctacatggaaattttccggtaagcgtgcgag 42515759  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    |||| | ||||||||||||||| | || |||||||||||||||||||||| ||||    
T  42515760 tgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaat 42515814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 34405621 - 34405458
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| | || ||| ||| ||||| ||||||    
T  34405621 cggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagcgtgcgag 34405522  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagt 163  Q
    |||| | ||||||||||||||| |  | ||||| ||||||||||||||||||||| ||||||||    
T  34405521 tgaggacaaaacacgctgaaaagacccgtgttgatttgtggggtcagtcgacaatcctaaaagt 34405458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 7646508 - 7646354
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | || |||  || ||||  ||||||    
T  7646508 cggtagctcattccataagaacttcacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttctcggtaagtgtgcgag 7646409  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    |||| | ||||||||||||||| | || |||||||||||||||||||||||||||    
T  7646408 tgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcgacaat 7646354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 2941787 - 2941633
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| | || ||| ||| ||||| ||||||    
T  2941787 cggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagcgtgcgag 2941688  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    |||| | ||||||||||||||| | || |||||||||||| ||||||||| ||||    
T  2941687 tgaggagaaaacacgctgaaaagactcgtgttggtttgtgcggtcagtcggcaat 2941633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 9125075 - 9125229
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| |||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||||| | || ||||||| ||||| ||||||    
T  9125075 cggtagctcattccataagaactccacagttaagcgtgcttgactcggagcaattttgggatgggtgacctaccgggaagttttccggtaagcgtgcgag 9125174  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    |||| | |||||| |||||||| | || |||||||||||||||||||||| ||||    
T  9125175 tgaggacaaaacatgctgaaaagactcgtgttggtttgtggggtcagtcggcaat 9125229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 2466040 - 2466211
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| |||||||||||||| ||||||||||||| |||||||||||||||||| ||||||||||||||||| | |||||| ||| ||||||||| ||    
T  2466040 cggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaatttcgggatgggtgacctaccgggaaatttcccggtaagcatgcaag 2466139  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtcatctggga 172  Q
    |||| | ||||||||||||||| | || |||| ||||||  |||||||||||||| || |||||| |||||||    
T  2466140 tgaggacaaaacacgctgaaaagactcgtgttagtttgt-aggtcagtcgacaatgcttaaagtcgtctggga 2466211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 28495970 - 28496124
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||   | || ||| ||| ||||| ||||||    
T  28495970 cggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctattgggaagtttcccggtaagcgtgcgag 28496069  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    |||| | ||||||||||||||| | || |||||||||||||||||||||| ||||    
T  28496070 tgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaat 28496124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 36422368 - 36422521
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| ||| |||||||||| ||||||||||||| |||||||||||||||||| ||||||||||||||||| | || ||| ||| ||||  ||||||    
T  36422368 cggtagctcatttcataagaactccacagttaagcgtgcttgacttggagcaattt-gggatgggtgacctaccgggaagtttcccggtaagtgtgcgag 36422466  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    |||| | ||||||||||||||| | || |||||||||||||||||||||||||||    
T  36422467 tgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcgacaat 36422521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 13122535 - 13122380
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| |||||||||||||| ||||||||||||| ||||| |||||||||||||||||||||||||||||| | || ||| ||| ||||| ||||||    
T  13122535 cggtagctcattccataagaactccacagttaagcgtgcttgatttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagcgtgcgag 13122436  T
Q  100 tga-gaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    ||| ||  ||||||||||||||| | || |||||||||||||||||| ||| ||||    
T  13122435 tgaggacaaaaacacgctgaaaagactcgtgttggtttgtggggtcaatcggcaat 13122380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 13125166 - 13125011
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| | || ||| ||  ||||| ||||||    
T  13125166 cggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccagtaagcgtgcgag 13125067  T
Q  100 tga-gaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    ||| ||  ||||||||||||||  | || |||||||||||||||||||||| ||||    
T  13125066 tgaggacaaaaacacgctgaaaggactcgtgttggtttgtggggtcagtcggcaat 13125011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 2465849 - 2465952
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| | |||||| ||| ||||||||||||    
T  2465849 cggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaaatttcccggtaagcatgcgag 2465948  T
Q  100 tgag 103  Q
    ||||    
T  2465949 tgag 2465952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 2193372 - 2193526
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| ||| |||| ||||| ||||||||||||| ||||| |||||||||||||||||||||||||||||| | || ||| ||| ||||| || |||    
T  2193372 cggtagctcatttcataggaactccacagttaagcgtgcttgatttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagcgtgtgag 2193471  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    |||| | ||||||||||||||| | || ||||| |||||||||||||||| ||||    
T  2193472 tgaggacaaaacacgctgaaaagactcgtgttgatttgtggggtcagtcggcaat 2193526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 6719104 - 6718933
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| |||||||||||||| || |||||||||| |||||||||||| ||||| |||||||||||| || | | || ||| ||| ||||| ||||||    
T  6719104 cggtagctcattccataagaactccagagttaagcgtgcttgacttggagtaattt-gggatgggtgacatatcgggaactttcccggtaagcgtgcgag 6719006  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtcatctggga 172  Q
    |||| | ||||||| ||||||| | || |||||||||||||||||||||  |||| ||||||||| |||||||    
T  6719005 tgaggacaaaacacactgaaaagaatcgtgttggtttgtggggtcagtcagcaatcctaaaagtcgtctggga 6718933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 9 - 169
Target Start/End: Original strand, 42515217 - 42515377
Alignment:
Q  9 attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataa 108  Q
    |||||||||||||| ||||||||||||| |||||||||||| | | || ||||||||||| |||||| || |||| || ||||| |||| ||||| | ||    
T  42515217 attccataagaactccacagttaagcgtgcttgacttggagtagtctttggatgggtgacataccaggaactttttcggtaagcgtgcgggtgaggacaa 42515316  T
Q  109 aacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtcatctg 169  Q
    ||||||||||||| | || ||||||||||| |||||||||| |||| || |||||| ||||    
T  42515317 aacacgctgaaaagactcgtgttggtttgtagggtcagtcggcaatgcttaaagtcgtctg 42515377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 13 - 154
Target Start/End: Original strand, 2189273 - 2189414
Alignment:
Q  13 cataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaaca 112  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||||||| |||||||||| | || ||| ||| ||||| || ||||||| | ||||||    
T  2189273 cataagaactccacagttaagcgtgcttgacttggagcaattttgggatgagtgacctaccgggaagtttcccggtaagcgtgtgagtgaggacaaaaca 2189372  T
Q  113 cgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    |||||| || | || ||||| ||||||||| |||||| ||||    
T  2189373 cgctgagaagactcgtgttgatttgtggggacagtcggcaat 2189414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 18833402 - 18833556
Alignment:
Q  1 cggtagcta-ttccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    ||||||||| || |||||||||| |||||||||||||  ||||||| ||||||||||||||||||||||||||| | || ||| ||| ||| | ||||||    
T  18833402 cggtagctaattacataagaactccacagttaagcgtgtttgactttgagcaattttgggatgggtgacctaccgggaagtttcccggtaaacgtgcgag 18833501  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    |||| | ||||||||||||||| | || ||||| |||||||| | ||||| ||||    
T  18833502 tgaggacaaaacacgctgaaaagactcgtgttgatttgtgggataagtcggcaat 18833556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 43776320 - 43776178
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| |||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||| |  | || ||||||  ||||| |||||     
T  43776320 cggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttggaatgggtgacctgcggggaagttttccagtaagcgtgcgaa 43776221  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtgggg 142  Q
    |||  | ||||||||||||||| | || |||||||||||||||    
T  43776220 tgaagacaaaacacgctgaaaagactcgtgttggtttgtgggg 43776178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 9 - 172
Target Start/End: Original strand, 679941 - 680104
Alignment:
Q  9 attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaa-ta 107  Q
    |||||||||||||| ||||||||||||| |||||||||||| | | || ||||||||||||| || | || |||  || ||| ||||||||||||||  |    
T  679941 attccataagaactccacagttaagcgtgcttgacttggagtagtctttggatgggtgacctgccgggaagtttcgcggtaaacatgcgagtgagaacaa 680040  T
Q  108 aaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtcatctggga 172  Q
    |||||||||||||| | ||||||||||||||  |||||||| ||||| || |||||| |||||||    
T  680041 aaacacgctgaaaagactcatgttggtttgt-aggtcagtctacaatgcttaaagtcgtctggga 680104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 9 - 154
Target Start/End: Complemental strand, 28495629 - 28495495
Alignment:
Q  9 attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataa 108  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| | |           |||| |||||||||| | ||    
T  28495629 attccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccggga-----------aagcgtgcgagtgaggacaa 28495541  T
Q  109 aacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    ||| ||||||||| | || |||||||||||||||||||||| ||||    
T  28495540 aacccgctgaaaagactcgtgttggtttgtggggtcagtcggcaat 28495495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 13 - 170
Target Start/End: Complemental strand, 3305365 - 3305208
Alignment:
Q  13 cataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaaca 112  Q
    ||||| |||||||||||||||||| ||||| |||||| | | || |||||||||||||||| |||| ||| | | ||||  |||||||||||| ||||||    
T  3305365 cataaaaacttcacagttaagcgtgcttgatttggagtagtctttggatgggtgacctaccggaaagtttcctggtaagagtgcgagtgagaacaaaaca 3305266  T
Q  113 cgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtcatctgg 170  Q
    ||||||||| | || ||||| ||||| || ||||||  ||||||| |||||| |||||    
T  3305265 cgctgaaaagactcgtgttgatttgtaggatcagtcagcaatacttaaagtcgtctgg 3305208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 9 - 172
Target Start/End: Complemental strand, 29039041 - 29038878
Alignment:
Q  9 attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataa 108  Q
    ||||||||||||||  ||| |||||||| |||||||||||| | | || |||||| ||||||||| | || ||| ||| ||||| || || |||| | ||    
T  29039041 attccataagaactctacatttaagcgtgcttgacttggagtagtctttggatggatgacctaccggtaagtttcccggtaagcgtgtgactgaggacaa 29038942  T
Q  109 aacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtcatctggga 172  Q
    ||||||||||||| | || ||||||||||| |||||||||| |||| || |||||| |||||||    
T  29038941 aacacgctgaaaagactcgtgttggtttgtagggtcagtcggcaatgcttaaagtcgtctggga 29038878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 16 - 164
Target Start/End: Complemental strand, 22529249 - 22529101
Alignment:
Q  16 aagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttc-cgataagcatgcgagtgagaataaaacacg 114  Q
    |||||||||||||||||||||  ||||||||||| | | || |||||||||||||||  || || |||| || ||||| || ||||||| | |||| |||    
T  22529249 aagaacttcacagttaagcgtgtttgacttggagtagtctttggatgggtgacctact-gagaagtttctcggtaagcgtgtgagtgaggacaaaatacg 22529151  T
Q  115 ctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtc 164  Q
    ||||||| | |||||||||||||| ||||||||||||||| || ||||||    
T  22529150 ctgaaaagactcatgttggtttgtagggtcagtcgacaatgcttaaagtc 22529101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 12 - 139
Target Start/End: Complemental strand, 5406606 - 5406478
Alignment:
Q  12 ccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccg-ataagcatgcgagtgagaataaaa 110  Q
    ||||||||||| ||||||||||||| |||||||| ||||||||||||||||| |||| | |  |||| ||||||| | || | |||||||||| | ||||    
T  5406606 ccataagaactccacagttaagcgtgcttgactttgagcaattttgggatggatgactttctggaaagttttccgaaaaaacgtgcgagtgaggacaaaa 5406507  T
Q  111 cacgctgaaaaaattcatgttggtttgtg 139  Q
    ||| ||||||| | || ||||||| ||||    
T  5406506 cacactgaaaacactcgtgttggtctgtg 5406478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 94 - 172
Target Start/End: Original strand, 36422592 - 36422670
Alignment:
Q  94 tgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtcatctggga 172  Q
    |||||||||| | ||||||| ||||||| | || ||||| ||||||||||||||||||||| |||||||| ||||||||    
T  36422592 tgcgagtgaggacaaaacacactgaaaagactcgtgttgatttgtggggtcagtcgacaatgctaaaagtaatctggga 36422670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 80 - 154
Target Start/End: Original strand, 43233153 - 43233227
Alignment:
Q  80 ttttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    ||||||| ||||| |||||||||| | ||||||||||||||| | || |||||||||||||||||||||| ||||    
T  43233153 ttttccggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaat 43233227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 120
Target Start/End: Complemental strand, 35474142 - 35474031
Alignment:
Q  9 attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataa 108  Q
    |||||||||||||| |||||||||||||  ||||||||||| | | || ||||||||||| |||| | || |||  || ||||  |||||||||| | ||    
T  35474142 attccataagaactccacagttaagcgtgtttgacttggagtagtctttggatgggtgacgtaccgggaattttctcggtaagtgtgcgagtgaggacaa 35474043  T
Q  109 aacacgctgaaa 120  Q
    ||||||||||||    
T  35474042 aacacgctgaaa 35474031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 1628841 - 1628899
Alignment:
Q  12 ccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacct 70  Q
    ||||||||||| || ||||||| ||| ||| ||||||||||||||||||||||||||||    
T  1628841 ccataagaactccatagttaagtgtatttggcttggagcaattttgggatgggtgacct 1628899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 9 - 164
Target Start/End: Complemental strand, 2611673 - 2611525
Alignment:
Q  9 attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataa 108  Q
    |||| ||||||||| || |||||||||| ||| |||||||| | | || |||||||||||||||| |  || |       |||| |||||||||| | ||    
T  2611673 attctataagaactccatagttaagcgtgctttacttggagtagtctttggatgggtgacctaccgggtaact-------aagcgtgcgagtgaggacaa 2611581  T
Q  109 aacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtc 164  Q
    ||||| ||||||| | || ||||||||||| ||||||||||||||| || ||||||    
T  2611580 aacactctgaaaagactcgtgttggtttgtagggtcagtcgacaatgcttaaagtc 2611525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 8 - 77
Target Start/End: Original strand, 46425865 - 46425934
Alignment:
Q  8 tattccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaa 77  Q
    ||||||||||||||| ||||||||||||| |||||||||||| | | ||  |||||||||||||| ||||    
T  46425865 tattccataagaactccacagttaagcgtgcttgacttggagtagtcttatgatgggtgacctacgagaa 46425934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 20966167 - 20966235
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgac 68  Q
    |||||||| |||||||||||||||||||||||| | | | ||||||| | |||||||||||||||||||    
T  20966167 cggtagctcattccataagaacttcacagttaaacatgcatgacttgtatcaattttgggatgggtgac 20966235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 94 - 169
Target Start/End: Complemental strand, 6748012 - 6747937
Alignment:
Q  94 tgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtcatctg 169  Q
    |||||||||| | ||||||||||||||| | || ||||||||||| |||||||||| |||| || |||||| ||||    
T  6748012 tgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtagggtcagtcggcaatgcttaaagtcgtctg 6747937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 92 - 172
Target Start/End: Complemental strand, 26419173 - 26419093
Alignment:
Q  92 catgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtcatctggga 172  Q
    |||| ||||||| | |||||| | |||||| | || ||||||||||||||||||||||||||| || ||| || |||||||    
T  26419173 catgtgagtgaggacaaaacatgttgaaaagactcgtgttggtttgtggggtcagtcgacaatcctgaaattcctctggga 26419093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 162
Target Start/End: Original strand, 25182486 - 25182639
Alignment:
Q  9 attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataa 108  Q
    ||||||||||||||||||||||||| ||  ||||||||||| | | || ||||||  ||||| |  | || |||  | | |||| | ||||||||   ||    
T  25182486 attccataagaacttcacagttaagtgtgtttgacttggagtagtctttggatggaggaccttctgggaagtttctcaaaaagcgttcgagtgagggcaa 25182585  T
Q  109 aacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaag 162  Q
    |||||||| |||||| || | |||| ||||||||||| |||| ||| |||||||    
T  25182586 aacacgctaaaaaaactcgtattgggttgtggggtcaatcgaaaatcctaaaag 25182639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 94 - 154
Target Start/End: Complemental strand, 7461318 - 7461258
Alignment:
Q  94 tgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    |||||||||  ||||||||||||||||| | || ||||| |||||||| ||| ||||||||    
T  7461318 tgcgagtgaagataaaacacgctgaaaagactcgtgttgatttgtgggatcaatcgacaat 7461258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 33316943 - 33316979
Alignment:
Q  126 catgttggtttgtggggtcagtcgacaatactaaaag 162  Q
    |||||||||||||| |||||||||||||| |||||||    
T  33316943 catgttggtttgtgaggtcagtcgacaatcctaaaag 33316979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 99; Significance: 2e-48; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 2474521 - 2474683
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| |||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||| |||| ||| ||| ||||||||||||    
T  2474521 cggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgagatgggtgacctaccggaaagtttcccggtaagcatgcgag 2474620  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaag 162  Q
    |||| | ||||||||||||||| | || |||||||||||||||||||||| |||| |||||||    
T  2474621 tgaggaaaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctaaaag 2474683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 17445485 - 17445321
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| |||||||||||| | ||||||||||||| |||||||||||||||||||||||||||||||||||| | || ||| ||| ||||| ||||||    
T  17445485 cggtagctcattccataagaaatccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagcgtgcgag 17445386  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtc 164  Q
    |||| | ||||||||||||||| | || ||||||||||||||||||||||||||| |||||||||    
T  17445385 tgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcgacaatcctaaaagtc 17445321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 34372184 - 34372338
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| | || ||||||||||||| ||||||    
T  34372184 cggtagctcattccataagaacttcacagttaagcgtgcttgacttggagcaattttgggattggtgacctaccgggaagttttccgataagcgtgcgag 34372283  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    |||| | ||||||||||||||| | || ||||||||| ||| |||||||| ||||    
T  34372284 tgaggaaaaaacacgctgaaaatactcgtgttggtttatggcgtcagtcggcaat 34372338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 189184 - 189332
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| |||||||||||||| ||||||||||| | |||||||||||||||||||||||||||||||||||| |||| ||| ||| ||| | ||||||    
T  189184 cggtagctcattccataagaactccacagttaagcatgcttgacttggagcaattttgggatgggtgacctaccggaaagtttcccggtaaacgtgcgag 189283  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtc 148  Q
    |||| | ||||||||||||||| | || |||||||||||||| ||||||    
T  189284 tgaggacaaaacacgctgaaaagactcgtgttggtttgtgggatcagtc 189332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 15 - 172
Target Start/End: Original strand, 22557100 - 22557258
Alignment:
Q  15 taagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacg 114  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| | || ||| ||| ||||| |||||||||| | ||||||||    
T  22557100 taagaacttcacagttaagcgtgcctgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagcgtgcgagtgaggacaaaacacg 22557199  T
Q  115 ctg-aaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtcatctggga 172  Q
    ||| |||| | || ||||||||||| ||||||||||||||| || || ||| |||||||    
T  22557200 ctgtaaaagactcgtgttggtttgtagggtcagtcgacaatcctgaatgtcgtctggga 22557258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 34371728 - 34371882
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| |||||||||||||  ||||||||||||| |||||||||||||||||||||||||||||||||||  | || ||| ||| ||||| ||||||    
T  34371728 cggtagctcattccataagaacaccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctactgggaagtttcccggtaagcgtgcgag 34371827  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    |||| | |||||||| |||||| | || |||||||||||||||||||||| ||||    
T  34371828 tgaggacaaaacacgttgaaaagactcgtgttggtttgtggggtcagtcggcaat 34371882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 9 - 154
Target Start/End: Complemental strand, 3887078 - 3886933
Alignment:
Q  9 attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataa 108  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||  | || ||| ||  ||||| |||||||||| | ||    
T  3887078 attccataagaacttcacagttaagcgtgcttgacttggagcaatttttggatgggtgacctactgggaagtttcccagtaagcgtgcgagtgaggacaa 3886979  T
Q  109 aacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    |||||||||| || | || |||||||||||||||||||||| ||||    
T  3886978 aacacgctgacaagactcgtgttggtttgtggggtcagtcggcaat 3886933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 3886631 - 3886477
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| |||||||||||||| |||||||||||||  ||||| |||||||||||| |||||||||||||||| | || ||| ||  ||||| ||||||    
T  3886631 cggtagctcattccataagaactccacagttaagcgtgtttgacgtggagcaatttttggatgggtgacctaccgggaagtttcccagtaagcgtgcgag 3886532  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    |||| | ||||||||||||||| | || |||||||||||||||||||||| ||||    
T  3886531 tgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaat 3886477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 8391352 - 8391202
Alignment:
Q  1 cggtagcta-ttccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    ||||||||| ||||||||||||| || |||||||||| |||||||||||||||||||||||||||||||||||| | || |||  |||||| | ||||||    
T  8391352 cggtagctaattccataagaactccatagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttctcgataaacgtgcgag 8391253  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcga 150  Q
    |||| | |||||||||||| || | || ||||| |||||||||||||||||    
T  8391252 tgaggacaaaacacgctgagaagactcgtgttgatttgtggggtcagtcga 8391202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 15 - 172
Target Start/End: Original strand, 22556667 - 22556825
Alignment:
Q  15 taagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacg 114  Q
    ||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||| || |||  || ||||| |||||||||| | ||||||||    
T  22556667 taagaacttcacagttaagcgtggctgacttggagcaattttgggatgggtgacctaccaggaagtttctcggtaagcgtgcgagtgaggacaaaacacg 22556766  T
Q  115 ctg-aaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtcatctggga 172  Q
    ||| |||| | || ||||||||||| ||||||||||||||| || || ||| |||||||    
T  22556767 ctgtaaaagactcgtgttggtttgtagggtcagtcgacaatccttaatgtcgtctggga 22556825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 42788676 - 42788522
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| |||||| ||||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||| | || |||  || ||||| ||||||    
T  42788676 cggtagctcattccacaagaactccacagttaagcgtgcttgacttggagcaattttgggataggtgacctaccgggaagtttctcggtaagcttgcgag 42788577  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    |||| | ||||||||||||||| |  | ||||||||||||| |||||||||||||    
T  42788576 tgaggacaaaacacgctgaaaagacccgtgttggtttgtggagtcagtcgacaat 42788522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 2474075 - 2474227
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||          | ||| ||||| ||||||    
T  2474075 cggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgaccta----------tcccggtaagcgtgcgag 2474164  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaag 162  Q
    |||| | ||||||||||||||| | || |||||||||||||||||||||| |||| |||||||    
T  2474165 tgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctaaaag 2474227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 8642064 - 8641911
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| |||||||||||||| ||||||||||||| |||||||||||||||||||  ||||||||||||| | | || |||  || ||||| ||||||    
T  8642064 cggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttaagatgggtgaccta-cgggaagtttctcggtaagcgtgcgag 8641966  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    |||| | ||||||||||||||| | || |||||||||||||||||||||| ||||    
T  8641965 tgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaat 8641911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 12 - 166
Target Start/End: Complemental strand, 24182264 - 24182110
Alignment:
Q  12 ccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaac 111  Q
    |||||| ||||| ||||||||||||  |||||||||||||||||||||||||||||||| | | ||| |||  ||  |||  |||||||||| |||||||    
T  24182264 ccataataacttaacagttaagcgtggttgacttggagcaattttgggatgggtgaccttctaaaaagtttctcggaaagtgtgcgagtgaggataaaac 24182165  T
Q  112 acgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtcat 166  Q
    ||| |||||| |||| |||||||||||||||| |||||||||| || ||||||||    
T  24182164 acgttgaaaagattcgtgttggtttgtggggttagtcgacaatcctgaaagtcat 24182110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 9 - 154
Target Start/End: Complemental strand, 15513033 - 15512888
Alignment:
Q  9 attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataa 108  Q
    |||||||||||||| |||| |||| ||| ||||||||| |||||||||||||||| ||||||||| | || ||| ||| ||||| |||||||||| | ||    
T  15513033 attccataagaactccacaattaaacgtgcttgacttgaagcaattttgggatggatgacctaccgggaagtttcccggtaagcgtgcgagtgaggacaa 15512934  T
Q  109 aacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    || ||| |||||| | || |||||||||||||||||||||| ||||    
T  15512933 aatacgttgaaaagactcgtgttggtttgtggggtcagtcggcaat 15512888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 2193932 - 2194074
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||            ||| ||||  ||||||    
T  2193932 cggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgaccta------------ccggtaagtgtgcgag 2194019  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    |||| | ||||||||||||||| |  | |||||||||||||||||||||||||||    
T  2194020 tgaggacaaaacacgctgaaaagacccgtgttggtttgtggggtcagtcgacaat 2194074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 9 - 172
Target Start/End: Original strand, 1822031 - 1822194
Alignment:
Q  9 attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataa 108  Q
    |||||||||||||| |||| |||||||| |||||||||||| | | || |||||||||||||||| | || ||| ||| ||||| || || |||| | ||    
T  1822031 attccataagaactccacatttaagcgtgcttgacttggagtagtctttggatgggtgacctaccgggaagtttcccggtaagcgtgtgaatgaggacaa 1822130  T
Q  109 aacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtcatctggga 172  Q
    ||||||||||||| | || ||||||||||| ||||| ||| ||||| || |||||| |||||||    
T  1822131 aacacgctgaaaagactcgtgttggtttgtagggtcggtcaacaatgcttaaagtcgtctggga 1822194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 8 - 164
Target Start/End: Complemental strand, 18750218 - 18750062
Alignment:
Q  8 tattccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaata 107  Q
    ||||||||||||||| || | |||| ||||||||||||||||||||||| ||||||||||||| | || || ||||     |||  |||||||||| | |    
T  18750218 tattccataagaactccataattaatcgtacttgacttggagcaattttaggatgggtgaccttctaggaagttttttagaaagtgtgcgagtgaggaca 18750119  T
Q  108 aaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtc 164  Q
    |||||| ||||||| | ||  |||||||||||||||||||| |||||||| ||||||    
T  18750118 aaacacactgaaaagactcgagttggtttgtggggtcagtcaacaatacttaaagtc 18750062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 11 - 162
Target Start/End: Complemental strand, 11757300 - 11757149
Alignment:
Q  11 tccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaa 110  Q
    |||||||||||| ||||||||||||| ||||||||  |||||||| | ||||||||||||||| | ||||||| || ||||| || ||||||| |  |||    
T  11757300 tccataagaactccacagttaagcgtgcttgacttacagcaatttcgagatgggtgacctaccgggaaatttttcggtaagcgtgtgagtgaggacgaaa 11757201  T
Q  111 cacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaag 162  Q
      |||| |||| | || |||||||||| ||||||||||| |||| |||||||    
T  11757200 tccgcttaaaagactcttgttggtttgcggggtcagtcggcaatcctaaaag 11757149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 9 - 154
Target Start/End: Complemental strand, 10927424 - 10927279
Alignment:
Q  9 attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataa 108  Q
    |||||||||||||| ||||||||| ||| |||||||||||| | | || |||||||||||| ||| | || |||| || ||||| || || |||| | ||    
T  10927424 attccataagaactccacagttaaacgtgcttgacttggagtagtctttggatgggtgaccgaccgggaagtttttcggtaagcgtgtgaatgaggacaa 10927325  T
Q  109 aacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    ||||||||||||| | || ||||||||||| ||||| |||||||||    
T  10927324 aacacgctgaaaagactcgtgttggtttgtagggtcggtcgacaat 10927279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 13 - 170
Target Start/End: Complemental strand, 29680124 - 29679967
Alignment:
Q  13 cataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaaca 112  Q
    |||||||||| |||||||||||||  ||||||||||| | | || ||||||||||||| ||   || ||| ||||||||| ||| | |||| | ||||||    
T  29680124 cataagaactccacagttaagcgtgtttgacttggagtagtctttggatgggtgaccttccgagaagtttcccgataagcgtgcaaatgaggacaaaaca 29680025  T
Q  113 cgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtcatctgg 170  Q
    ||||||||| | || ||||||||||| |||||||||| |||| || |||||| |||||    
T  29680024 cgctgaaaagactcgtgttggtttgtagggtcagtcggcaatgcttaaagtcgtctgg 29679967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 14 - 154
Target Start/End: Complemental strand, 30720276 - 30720136
Alignment:
Q  14 ataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacac 113  Q
    |||||||||  |||||||| ||| ||||||||||| |||||||||||||| |||| | |  ||||  ||||||| |||| |||||| ||| | |||||||    
T  30720276 ataagaactctacagttaatcgtgcttgacttggaacaattttgggatggatgactttcttgaaagctttccgaaaagcgtgcgagcgaggacaaaacac 30720177  T
Q  114 gctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    |||||||| | || ||||||||||||| |||| ||||||||    
T  30720176 gctgaaaagactcctgttggtttgtggagtcaatcgacaat 30720136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 21886176 - 21886073
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| |||||||||||||| || ||||||| || |||||||||||||||||||||||||||||||||||  | || ||| ||| ||||| ||||||    
T  21886176 cggtagctcattccataagaactccaaagttaagtgtgcttgacttggagcaattttgggatgggtgacctactgggaagtttcccggtaagcgtgcgag 21886077  T
Q  100 tgag 103  Q
    ||||    
T  21886076 tgag 21886073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 9 - 154
Target Start/End: Complemental strand, 20858562 - 20858418
Alignment:
Q  9 attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataa 108  Q
    |||||||||||||| || |||||||  | ||||||||||||||| |||||||||| |||||| |  | || ||||| || |||||||| |||||| | ||    
T  20858562 attccataagaactccatagttaaggttgcttgacttggagcaactttgggatgg-tgaccttctgggaagttttctgaaaagcatgctagtgaggacaa 20858464  T
Q  109 aacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    ||||||||||||| | || ||||| |||||  ||||||||||||||    
T  20858463 aacacgctgaaaatactcgtgttgatttgttaggtcagtcgacaat 20858418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 13 - 149
Target Start/End: Complemental strand, 27646852 - 27646716
Alignment:
Q  13 cataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaaca 112  Q
    |||||||||| ||||||||||||| |||| ||||||| | | || | |||||||||||||| | || ||| || |||| | |||||||||| | ||||||    
T  27646852 cataagaactccacagttaagcgtgcttgtcttggagtagtctttgcatgggtgacctaccgggaagtttcccaataaacgtgcgagtgaggacaaaaca 27646753  T
Q  113 cgctgaaaaaattcatgttggtttgtggggtcagtcg 149  Q
     |||||||| | ||||||||||||||  |||||||||    
T  27646752 tgctgaaaagactcatgttggtttgtatggtcagtcg 27646716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 14 - 154
Target Start/End: Complemental strand, 30685027 - 30684887
Alignment:
Q  14 ataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacac 113  Q
    |||||||||  || |||||| || ||||||||||| |||||||| ||||| |||| | |  |||| |||||||| |||| ||| || ||| | |||||||    
T  30685027 ataagaactctacggttaagtgtgcttgacttggaacaattttgagatggatgactttcttgaaagttttccgaaaagcgtgcaagcgaggacaaaacac 30684928  T
Q  114 gctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    |||||||| | || |||||||||||||||||| ||| ||||    
T  30684927 gctgaaaagactcgtgttggtttgtggggtcaatcggcaat 30684887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 4102924 - 4102982
Alignment:
Q  12 ccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacct 70  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||| |||| |||||||    
T  4102924 ccataagaacttcacagttaaacgtgcttgacttggagcaattttgagatgagtgacct 4102982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 30684574 - 30684516
Alignment:
Q  12 ccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacct 70  Q
    ||||||||||| ||||||||||||| ||  |||||||||||||||||||||||||||||    
T  30684574 ccataagaactccacagttaagcgtgctcaacttggagcaattttgggatgggtgacct 30684516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 138
Target Start/End: Complemental strand, 20039496 - 20039367
Alignment:
Q  9 attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataa 108  Q
    ||||||||||||||  ||||||||| || |||||||| ||| | | || |||| |||||||||   | || ||| ||| ||||| |||||||||| | ||    
T  20039496 attccataagaactctacagttaagtgtgcttgacttagagtagtctttggattggtgacctattgggaagtttcccggtaagcgtgcgagtgaggacaa 20039397  T
Q  109 aacacgctgaaaaaattcatgttggtttgt 138  Q
    ||||||||||||| | ||||||||||||||    
T  20039396 aacacgctgaaaagactcatgttggtttgt 20039367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 18304547 - 18304617
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacct 70  Q
    |||||||| |||||||||||| | ||||||||||| |  ||||||||||||||||||| ||||||||||||    
T  18304547 cggtagctcattccataagaattccacagttaagcatgtttgacttggagcaattttgtgatgggtgacct 18304617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 10926967 - 10926903
Alignment:
Q  9 attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctacc 73  Q
    |||||||||||||| ||||||||| ||| |||||||||||| | | || ||||||||||||||||    
T  10926967 attccataagaactccacagttaaacgtgcttgacttggagtagtctttggatgggtgacctacc 10926903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 107 - 154
Target Start/End: Complemental strand, 21884008 - 21883961
Alignment:
Q  107 aaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    ||||||||||||||| | || |||||||||||||||||||||||||||    
T  21884008 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcgacaat 21883961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 169
Target Start/End: Original strand, 1880199 - 1880361
Alignment:
Q  7 ctattccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaat 106  Q
    |||||||| |||||||  |||||||||||| | ||| |||| | ||| || |||| | |||| ||| || || ||||  | |||||  ||||||||| |     
T  1880199 ctattccacaagaactctacagttaagcgtgcatgagttggtgtaatatttggatagatgacttactaggaagttttatggtaagcgagcgagtgaggac 1880298  T
Q  107 aaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtcatctg 169  Q
    ||||||||||||||| | || |||||||||||  |||| ||||||||| || |||||| ||||    
T  1880299 aaaacacgctgaaaagactcgtgttggtttgtaaggtccgtcgacaatgcttaaagtcgtctg 1880361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 34867906 - 34867979
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctacc 73  Q
    |||||||| ||| |||||||||| || |||||||||| ||| |||| ||||||||||||||| |||||| ||||    
T  34867906 cggtagctcatttcataagaactccatagttaagcgtgcttaactttgagcaattttgggataggtgacttacc 34867979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 30719823 - 30719767
Alignment:
Q  12 ccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgac 68  Q
    ||||||||||| |||| |||||||| ||  ||||||||||||||||||| |||||||    
T  30719823 ccataagaactccacaattaagcgtgctcaacttggagcaattttgggacgggtgac 30719767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 39147064 - 39147104
Alignment:
Q  9 attccataagaacttcacagttaagcgtacttgacttggag 49  Q
    |||||||||||||| ||||||||||||| ||||||||||||    
T  39147064 attccataagaactccacagttaagcgtgcttgacttggag 39147104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 26 - 68
Target Start/End: Complemental strand, 16370715 - 16370673
Alignment:
Q  26 cagttaagcgtacttgacttggagcaattttgggatgggtgac 68  Q
    ||||||||| |  ||||||||||||||||||||||||||||||    
T  16370715 cagttaagcatgtttgacttggagcaattttgggatgggtgac 16370673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 32574674 - 32574632
Alignment:
Q  14 ataagaacttcacagttaagcgtacttgacttggagcaatttt 56  Q
    |||| ||||||| |||||||||| |||||||||||||||||||    
T  32574674 ataataacttcatagttaagcgtgcttgacttggagcaatttt 32574632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 58 - 172
Target Start/End: Complemental strand, 38063800 - 38063687
Alignment:
Q  58 ggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatact 157  Q
    |||||||||||||||  | || ||||||| ||||| ||||| |||| | |||| ||||||| |||| || ||||||| ||| |||||| |||||||| ||    
T  38063800 ggatgggtgacctactgggaagttttccggtaagcgtgcgaatgaggacaaaatacgctga-aaaactcgtgttggtgtgtagggtcattcgacaatgct 38063702  T
Q  158 aaaagtcatctggga 172  Q
     | |||| |||||||    
T  38063701 tagagtcgtctggga 38063687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 80 - 136
Target Start/End: Original strand, 187754 - 187810
Alignment:
Q  80 ttttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggttt 136  Q
    ||||||| ||||| |||||||||| | ||||||||||||||| | || |||||||||    
T  187754 ttttccggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggttt 187810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 38 - 70
Target Start/End: Complemental strand, 2058650 - 2058618
Alignment:
Q  38 cttgacttggagcaattttgggatgggtgacct 70  Q
    ||||||||||||||||||||||||| |||||||    
T  2058650 cttgacttggagcaattttgggatgagtgacct 2058618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0499 (Bit Score: 97; Significance: 2e-47; HSPs: 1)
Name: scaffold0499
Description:

Target: scaffold0499; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 2081 - 1917
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| | || ||| ||| ||||| ||||||    
T  2081 cggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagcgtgcgag 1982  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtc 164  Q
    |||| | |||| |||||||||| | || ||||||||||||||||||||||||||| |||||||||    
T  1981 tgaggacaaaatacgctgaaaagactcgtgttggtttgtggggtcagtcgacaatcctaaaagtc 1917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 94; Significance: 2e-45; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 17103197 - 17103370
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggt-gacctaccagaaaattttccgataagcatgcga 98  Q
    |||||||| |||||||||||||| ||| ||||||||| |||||||||||||||||||||||||||| |||||||| | || ||| ||| ||||| |||||    
T  17103197 cggtagctcattccataagaactccacggttaagcgtgcttgacttggagcaattttgggatgggttgacctaccgggaagtttcccggtaagcgtgcga 17103296  T
Q  99 gtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtcatctggga 172  Q
    ||||| | ||||||||||||||| | || ||||||||||||||||||||||||||| ||||||||| |||||||    
T  17103297 gtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcgacaatcctaaaagtcgtctggga 17103370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 10844645 - 10844473
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| |||||||||||||| ||||||||||||| ||||||||| |||||||||||||||||||||||||| | || |||  || ||||||||||||    
T  10844645 cggtagctcattccataagaactccacagttaagcgtgcttgacttgaagcaattttgggatgggtgacctaccgggaagtttctcggtaagcatgcgag 10844546  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtcatctggga 172  Q
    |||| | ||||||||||||||| | || |||| |||||| ||||||||||||||| ||||||||| |||||||    
T  10844545 tgaggacaaaacacgctgaaaagactcgtgtttgtttgtagggtcagtcgacaatcctaaaagtcgtctggga 10844473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 25148083 - 25148244
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| |||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||||||||||| |  || |||||||||| | ||||||    
T  25148083 cggtagctcattccataagaactccacagttaagcgtgcttgactttgagcaattttgggatgggtgacctacc-gggaagtttccgataaacgtgcgag 25148181  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaag 162  Q
    ||||   ||||||||||||||| | || ||||||||||||||||||||||||||| |||||||    
T  25148182 tgaggtcaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcgacaatcctaaaag 25148244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 9 - 162
Target Start/End: Complemental strand, 27022359 - 27022207
Alignment:
Q  9 attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataa 108  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||  |||| ||||  | ||||| |||||||||| | ||    
T  27022359 attccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctactggaaagtttt-tggtaagcgtgcgagtgaggacaa 27022261  T
Q  109 aacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaag 162  Q
    |||||||| |||| | || ||||||||||||||||||||||||||| |||||||    
T  27022260 aacacgctaaaaagactcgtgttggtttgtggggtcagtcgacaatcctaaaag 27022207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 22548579 - 22548425
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| ||||||||| |||| ||||||||||||| |||||||||||||||||||||||||||||||||||| | || ||| ||  ||||| ||||||    
T  22548579 cggtagctcattccataataactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccagtaagcgtgcgag 22548480  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    |||| | ||||||||||||||| | || |||||||||||||||||||||| ||||    
T  22548479 tgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaat 22548425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 22549025 - 22548871
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| ||||||||| |||| ||||||||||||| |||||||||||||||||||||||||||||||||||| | || ||| ||  ||||| ||||||    
T  22549025 cggtagctcattccataaaaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccagtaagcgtgcgag 22548926  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    |||| ||||||||||||||| | | || |||||||||||||||||||||| ||||    
T  22548925 tgaggataaaacacgctgaacagactcgtgttggtttgtggggtcagtcggcaat 22548871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 7 - 148
Target Start/End: Complemental strand, 34308958 - 34308817
Alignment:
Q  7 ctattccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaat 106  Q
    |||||||||||||||| ||||||||||||| |||| ||||||||||||||| ||||||||||||||| | || ||| ||| |||||||| ||||||| |     
T  34308958 ctattccataagaactccacagttaagcgtgcttggcttggagcaattttgagatgggtgacctaccgggaagtttcccggtaagcatgtgagtgaggac 34308859  T
Q  107 aaaacacgctgaaaaaattcatgttggtttgtggggtcagtc 148  Q
    ||||||||||||||| | || |||||||||||||||||||||    
T  34308858 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtc 34308817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 12100807 - 12100970
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| ||| |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| | || ||| |   ||||| ||||||    
T  12100807 cggtagctcatttcataagaacttcacagttaagcgtgcttgacttggagcaattttgg-atgggtgacctaccgggaagtttcctcgtaagcgtgcgag 12100905  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtc 164  Q
    |||| | ||||||||||||||| | || ||||||||||||||||||||||||||| || ||||||    
T  12100906 tgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcgacaatgctgaaagtc 12100970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 12827284 - 12827130
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| | || ||| ||| ||||  ||||||    
T  12827284 cggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagtgtgcgag 12827185  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    ||||  ||||||||  | |||| | || |||||||||||||||||||||||||||    
T  12827184 tgaggttaaaacacttttaaaagactcgtgttggtttgtggggtcagtcgacaat 12827130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 7 - 154
Target Start/End: Complemental strand, 34308502 - 34308355
Alignment:
Q  7 ctattccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaat 106  Q
    |||||||||||||||| |||| |||||||| |||| ||||||||||||||| ||||||||||||||| | || ||| ||| |||||||| ||||||| |     
T  34308502 ctattccataagaactccacacttaagcgtgcttggcttggagcaattttgagatgggtgacctaccgggaagtttcccggtaagcatgtgagtgaggac 34308403  T
Q  107 aaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    ||||||||||||||| | || || ||||||||||||||||||| ||||    
T  34308402 aaaacacgctgaaaagactcgtgctggtttgtggggtcagtcggcaat 34308355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 25147652 - 25147805
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| |||||||||||||| || |||||| ||| |||||||||||||||||||||||||||||||||||| | || ||| | ||||||| ||||||    
T  25147652 cggtagctcattccataagaactccatagttaatcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcctgataagcgtgcgag 25147751  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    |||| | ||||||||||||||| | || ||||||||||| |||||||||| ||||    
T  25147752 tgagtacaaaacacgctgaaaagactcgtgttggtttgt-gggtcagtcggcaat 25147805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 9 - 172
Target Start/End: Complemental strand, 31283672 - 31283510
Alignment:
Q  9 attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataa 108  Q
    |||||||||||||| |||||||||| || |||||||| |||||||||||| |||||||||||||| | || ||| ||| ||||| |||||||||| | ||    
T  31283672 attccataagaactccacagttaagtgtgcttgactttgagcaattttgg-atgggtgacctaccgggaagtttcccggtaagcgtgcgagtgaggacaa 31283574  T
Q  109 aacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtcatctggga 172  Q
    ||| || |||||| | || |||||||||||||||||||||||||||  | |||||| |||||||    
T  31283573 aacgcgttgaaaagactcgtgttggtttgtggggtcagtcgacaatgttgaaagtcgtctggga 31283510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 9 - 170
Target Start/End: Complemental strand, 8080363 - 8080202
Alignment:
Q  9 attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataa 108  Q
    |||||||||||||||||||||||||||| |||||||||||| | | || |||||||| |||||| || || |||  || ||||| |||||||||| | ||    
T  8080363 attccataagaacttcacagttaagcgtgcttgacttggagtagtctttggatgggtaacctactaggaagtttctcggtaagcgtgcgagtgaggacaa 8080264  T
Q  109 aacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtcatctgg 170  Q
    ||||||||||||| | || ||||||||||| ||| ||||||||||| || |||||| |||||    
T  8080263 aacacgctgaaaagactcgtgttggtttgtagggccagtcgacaatgcttaaagtcgtctgg 8080202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 13 - 162
Target Start/End: Complemental strand, 21316126 - 21315978
Alignment:
Q  13 cataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaaca 112  Q
    |||||||||| |||||||||| || |||||||||||| |||||||| | |||||||||||| |  || |||||| ||||| |||||||||| | ||||||    
T  21316126 cataagaactccacagttaagtgtgcttgacttggagtaattttggtaagggtgacctacc-gcgaagtttccggtaagcgtgcgagtgaggacaaaaca 21316028  T
Q  113 cgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaag 162  Q
    ||||||||| | || |||||||||||||||||| |||||||| |||||||    
T  21316027 cgctgaaaagactcgtgttggtttgtggggtcaatcgacaatcctaaaag 21315978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 13 - 154
Target Start/End: Complemental strand, 41659122 - 41658981
Alignment:
Q  13 cataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaaca 112  Q
    |||||||||| |||||||||||||  ||||||||||||||||||||||| ||||||||||| | || ||| ||  ||||  |||||||||| | ||||||    
T  41659122 cataagaactccacagttaagcgtgtttgacttggagcaattttgggataggtgacctaccgggaagtttccctgtaagtgtgcgagtgaggacaaaaca 41659023  T
Q  113 cgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    ||||||||| | || |||||||||||||||||||||| ||||    
T  41659022 cgctgaaaagactcgtgttggtttgtggggtcagtcggcaat 41658981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 27926015 - 27926186
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| ||| |||||||||| ||||||||||||| |||||||||||||||||| |||||||||||  |||| | || ||| ||| ||||  ||||||    
T  27926015 cggtagctcatttcataagaactccacagttaagcgtgcttgacttggagcaattt-gggatgggtgaggtaccgggaagtttcccggtaagtgtgcgag 27926113  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtcatctggga 172  Q
    |||| | |||||| |||||||| | || ||||||||||| ||||||||||||||| || |||||| |||||||    
T  27926114 tgaggacaaaacatgctgaaaagactcgtgttggtttgtagggtcagtcgacaatgcttaaagtcgtctggga 27926186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 22026495 - 22026650
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| |||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||| ||||| | | || ||| ||| ||||| ||||||    
T  22026495 cggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaatattgggatgggtaacctatcgggaagtttcccggtaagcgtgcgag 22026594  T
Q  100 tga-gaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    ||| ||  ||||||| ||||||| | || |||||||||||||||||||||| ||||    
T  22026595 tgaggacaaaaacacactgaaaagactcgtgttggtttgtggggtcagtcggcaat 22026650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 9 - 138
Target Start/End: Original strand, 32292522 - 32292651
Alignment:
Q  9 attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataa 108  Q
    |||||||||||||| ||||||||||||| |||||||||||| | | || |||||||||| ||||| | || ||||||| ||||| || ||||||| | ||    
T  32292522 attccataagaactccacagttaagcgtgcttgacttggagtagtctttggatgggtgatctaccgggaagttttccggtaagcgtgtgagtgaggacaa 32292621  T
Q  109 aacacgctgaaaaaattcatgttggtttgt 138  Q
    ||||||||||||| | || |||||||||||    
T  32292622 aacacgctgaaaagactcgtgttggtttgt 32292651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 9 - 148
Target Start/End: Original strand, 2044183 - 2044322
Alignment:
Q  9 attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataa 108  Q
    ||||||||| |||| ||||||||||||| |||||||||||| | | || ||||||||||||||   | || ||||||| ||||| |||||||||| | ||    
T  2044183 attccataataactccacagttaagcgtgcttgacttggagtagtctttggatgggtgacctaatgggaagttttccggtaagcgtgcgagtgaggacaa 2044282  T
Q  109 aacacgctgaaaaaattcatgttggtttgtggggtcagtc 148  Q
    ||||||||||||| | || | ||||||||| |||||||||    
T  2044283 aacacgctgaaaagactcgtattggtttgtagggtcagtc 2044322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 13 - 164
Target Start/End: Complemental strand, 30527499 - 30527348
Alignment:
Q  13 cataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaaca 112  Q
    |||||||||| ||||||||||  |  ||||||| ||| ||| || |||||||||| ||||| ||||| || ||| ||||| |||||||||| ||||||||    
T  30527499 cataagaactccacagttaagattgtttgactttgagtaatctttggatgggtgatctacctgaaaacttcccggtaagcgtgcgagtgaggataaaaca 30527400  T
Q  113 cgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtc 164  Q
    ||||||||| | || ||||| ||||| || |||||||||||| || ||||||    
T  30527399 cgctgaaaagactcgtgttgatttgtaggatcagtcgacaatgcttaaagtc 30527348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 4 - 154
Target Start/End: Original strand, 6466826 - 6466976
Alignment:
Q  4 tagctattccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgag 103  Q
    |||| ||| |||||||||| || | ||||| |||||||||||||||||||||||| ||||||||||| |  | || |||||    |||||| |||||||     
T  6466826 tagccatttcataagaactacaaatttaagtgtacttgacttggagcaattttggtatgggtgaccttcttggaagttttctagaaagcatacgagtgaa 6466925  T
Q  104 aataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    || ||| ||| || |||||| ||||||||||||||||||||||||| ||||    
T  6466926 aacaaagcacactaaaaaaactcatgttggtttgtggggtcagtcggcaat 6466976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 25144888 - 25144957
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacc 69  Q
    |||||||| |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  25144888 cggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacc 25144957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 9 - 138
Target Start/End: Complemental strand, 33852279 - 33852150
Alignment:
Q  9 attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataa 108  Q
    ||||||||||||||||||| |||||||| |||||||||||| | | || |||||||||||||| | |||| |||   ||||||| |||||||||| | ||    
T  33852279 attccataagaacttcacaattaagcgtgcttgacttggagtagtctttggatgggtgacctatcggaaagtttcatgataagcgtgcgagtgaggacaa 33852180  T
Q  109 aacacgctgaaaaaattcatgttggtttgt 138  Q
    |||||||| |||| | |||||||| |||||    
T  33852179 aacacgctaaaaagactcatgttgatttgt 33852150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 38 - 154
Target Start/End: Original strand, 32292095 - 32292211
Alignment:
Q  38 cttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttg 137  Q
    |||||||||||| | | || |||||||||||||||| | || ||| ||| ||||| |||||||||| | ||||||||||||||| | || ||||||||||    
T  32292095 cttgacttggagtagtctttggatgggtgacctaccgggaagtttcccggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttg 32292194  T
Q  138 tggggtcagtcgacaat 154  Q
    | |||||||||| ||||    
T  32292195 tagggtcagtcggcaat 32292211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 9 - 154
Target Start/End: Original strand, 41913095 - 41913240
Alignment:
Q  9 attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataa 108  Q
    |||||||||||||| | ||||||||||| ||||||||| || | | || ||||| ||||||||| ||||| |||   | ||||| ||| |||||| | ||    
T  41913095 attccataagaactccgcagttaagcgtgcttgacttgaagtagtctttggatgagtgacctactagaaagtttcttggtaagcgtgcaagtgaggacaa 41913194  T
Q  109 aacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    |||||| |||||||| || |||| |||| | |||||||||||||||    
T  41913195 aacacgttgaaaaaactcgtgttagtttatagggtcagtcgacaat 41913240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 162
Target Start/End: Original strand, 28453463 - 28453616
Alignment:
Q  9 attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataa 108  Q
    ||||||||||||||  |||||||||||| |||||||||||| | | || |||||| ||||||||  | || ||| |  |||||  |||||||||| | ||    
T  28453463 attccataagaactctacagttaagcgtgcttgacttggagtagtctttggatggatgacctactcggaagtttcctaataagactgcgagtgaggacaa 28453562  T
Q  109 aacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaag 162  Q
    |||| |||||||| | || |||| ||||||  | |||||||||||| |||||||    
T  28453563 aacatgctgaaaagagtcgtgtttgtttgtaagatcagtcgacaatcctaaaag 28453616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 9 - 145
Target Start/End: Original strand, 3745226 - 3745362
Alignment:
Q  9 attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttc-cgataagcatgcgagtgagaata 107  Q
    ||||||||| |||| |||||| |||||| |||||||| ||||||||||||||||| ||||| | | || || |||| | | |||| || || ||| ||||    
T  3745226 attccataataactccacagtcaagcgtgcttgacttagagcaattttgggatggctgacc-atctgagaagtttctcaaaaagcgtgtgaatgataata 3745324  T
Q  108 aaacacgctgaaaaaattcatgttggtttgtggggtca 145  Q
    ||||| |||||||| | |||||||| ||||| ||||||    
T  3745325 aaacatgctgaaaagactcatgttgatttgttgggtca 3745362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 64 - 164
Target Start/End: Complemental strand, 6463510 - 6463409
Alignment:
Q  64 gtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttgg-tttgtggggtcagtcgacaatactaaaag 162  Q
    |||||||||||||||| ||  || ||||| |||||||||| | ||||||||||||||| | || |||||| ||| | ||||||||||||||| || ||||    
T  6463510 gtgacctaccagaaaacttctcggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggttttttagggtcagtcgacaatgcttaaag 6463411  T
Q  163 tc 164  Q
    ||    
T  6463410 tc 6463409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 14 - 67
Target Start/End: Complemental strand, 15568025 - 15567972
Alignment:
Q  14 ataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtga 67  Q
    ||||||||| |||| ||||||||||||||||  |||||||||||||||||||||    
T  15568025 ataagaactccacaattaagcgtacttgactcagagcaattttgggatgggtga 15567972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 15 - 162
Target Start/End: Original strand, 25307895 - 25308042
Alignment:
Q  15 taagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacg 114  Q
    |||||||| ||||||||||| | |||||||||| | | | || ||||||||||| |||  |||| |||| ||  |||| |||||||||| | |||  |||    
T  25307895 taagaactccacagttaagcttgcttgacttggtgtagtctttggatgggtgacgtacttgaaagtttttcggcaagcgtgcgagtgaggacaaagtacg 25307994  T
Q  115 ctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaag 162  Q
    ||||||| | || ||||| ||| |||| ||||||| |||| |||||||    
T  25307995 ctgaaaagactcgtgttgatttatgggatcagtcggcaatcctaaaag 25308042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 92 - 154
Target Start/End: Original strand, 9251093 - 9251155
Alignment:
Q  92 catgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    |||| ||||||| | ||||||||||||||||| |  |||||||||||||||||| ||||||||    
T  9251093 catgtgagtgaggacaaaacacgctgaaaaaacttgtgttggtttgtggggtcaatcgacaat 9251155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 68
Target Start/End: Complemental strand, 6464931 - 6464872
Alignment:
Q  9 attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgac 68  Q
    ||||||||| |||| ||||||||||||| |||||||||||| | | || |||||||||||    
T  6464931 attccataacaactccacagttaagcgtgcttgacttggagtagtctttggatgggtgac 6464872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 172
Target Start/End: Original strand, 6466461 - 6466544
Alignment:
Q  89 aagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtcatctggga 172  Q
    |||||| |||||||| | ||| |||||| |||| | |  ||||||||||||||| |||||| ||||||| |||||| |||||||    
T  6466461 aagcatacgagtgaggacaaagcacgctaaaaagacttgtgttggtttgtggggccagtcggcaatactgaaagtcgtctggga 6466544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 170
Target Start/End: Complemental strand, 15819036 - 15818876
Alignment:
Q  9 attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataa 108  Q
    |||||||||||||| |||||||||   | |||||||||||| |   || ||||||| ||||| |  | || ||| |||| |||  |||||||||| | ||    
T  15819036 attccataagaact-cacagttaaatttgcttgacttggagtaggctttggatgggcgaccttctgggaagtttcccgaaaagtgtgcgagtgaggacaa 15818938  T
Q  109 aacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtcatctgg 170  Q
    | ||| ||||||| | |  ||||||||||||||| |||||| ||||||| |||||| |||||    
T  15818937 agcacactgaaaagacttgtgttggtttgtggggccagtcggcaatacttaaagtcgtctgg 15818876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 10844999 - 10845043
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgact 44  Q
    |||||||| |||||||||||||| ||||||||||||| |||||||    
T  10844999 cggtagctcattccataagaactccacagttaagcgtgcttgact 10845043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 91; Significance: 9e-44; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 1336 - 1490
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| | || ||| ||| ||||| ||||||    
T  1336 cggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagcgtgcgag 1435  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    |||| | ||||||||||||||| | || ||||||||||||| |||||||||||||    
T  1436 tgaggacaaaacacgctgaaaagactcgtgttggtttgtggcgtcagtcgacaat 1490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 91; Significance: 9e-44; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 20054566 - 20054412
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| | || ||| ||| ||||| ||||||    
T  20054566 cggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagcgtgcgag 20054467  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    |||| | ||||||||||||||| | || |||||||||||||||||||||| ||||    
T  20054466 tgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaat 20054412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 20055022 - 20054868
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| | || ||| ||| ||||| ||||||    
T  20055022 cggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagcgtgcgag 20054923  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    |||| | ||||||||||||||| | || |||||||||||||||||||||| ||||    
T  20054922 tgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaat 20054868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 20055478 - 20055324
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| | || ||| ||| ||||| ||||||    
T  20055478 cggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagcgtgcgag 20055379  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    |||| | ||||||||||||||| | || |||||||||||||||||||||| ||||    
T  20055378 tgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaat 20055324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 20055934 - 20055780
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| | || ||| ||| ||||| ||||||    
T  20055934 cggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagcgtgcgag 20055835  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    |||| | ||||||||||||||| | || |||||||||||||||||||||| ||||    
T  20055834 tgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaat 20055780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 20056390 - 20056236
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| | || ||| ||| ||||| ||||||    
T  20056390 cggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagcgtgcgag 20056291  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    |||| | ||||||||||||||| | || |||||||||||||||||||||| ||||    
T  20056290 tgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaat 20056236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 20057293 - 20057139
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| | || ||| ||| ||||| ||||||    
T  20057293 cggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagcgtgcgag 20057194  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    |||| | ||||||||||||||| | || |||||||||||||||||||||| ||||    
T  20057193 tgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaat 20057139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 20057749 - 20057595
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| | || ||| ||| ||||| ||||||    
T  20057749 cggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagcgtgcgag 20057650  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    |||| | ||||||||||||||| | || |||||||||||||||||||||| ||||    
T  20057649 tgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaat 20057595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 9 - 154
Target Start/End: Complemental strand, 16451954 - 16451809
Alignment:
Q  9 attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataa 108  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| |||| |||||| |||||| |||| ||||  | ||    
T  16451954 attccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccggaaagttttccaataagcgtgcgcgtgatgacaa 16451855  T
Q  109 aacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    ||||||||||||| | || |||||||||||||||||||||| ||||    
T  16451854 aacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaat 16451809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 9 - 154
Target Start/End: Complemental strand, 16461107 - 16460962
Alignment:
Q  9 attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataa 108  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| |||| |||||| |||||| |||| ||||  | ||    
T  16461107 attccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccggaaagttttccaataagcgtgcgcgtgatgacaa 16461008  T
Q  109 aacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    ||||||||||||| | || |||||||||||||||||||||| ||||    
T  16461007 aacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaat 16460962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 20054110 - 20053956
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| |||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||||| | || ||||| | ||||| ||||||    
T  20054110 cggtagctcattccataagaactccacagttaagcgtgcttgactaggagcaattttgggatgggtgacctaccgggaagttttctggtaagcgtgcgag 20054011  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    |||| | |||||| |||||||| | || |||||||||||||||||||||||||||    
T  20054010 tgaggacaaaacatgctgaaaagactcgtgttggtttgtggggtcagtcgacaat 20053956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 20056846 - 20056692
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| |||||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||| | || ||| ||| ||||| ||||||    
T  20056846 cggtagctcattccataagaactccacagttaagcgtgtttgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagcgtgcgag 20056747  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    |||| | ||||||||||||||| | || |||||||||||||||||||||| ||||    
T  20056746 tgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaat 20056692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 20845691 - 20845537
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| |||||||||||||| ||||||||||||| |||||||||||| ||||||||||||||||||||||| | || ||| ||| ||||| ||||||    
T  20845691 cggtagctcattccataagaactccacagttaagcgtgcttgacttggagaaattttgggatgggtgacctaccgggaagtttcccggtaagcgtgcgag 20845592  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    |||| | ||||||||||||||| | || |||||||||||||||||||||| ||||    
T  20845591 tgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaat 20845537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 9 - 148
Target Start/End: Complemental strand, 50003096 - 50002957
Alignment:
Q  9 attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataa 108  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| | || ||| ||| ||||| |||||||||| | ||    
T  50003096 attccaaaagaacttcacagttaagcgtgcttgacttggagcaatttttggatgggtgacctaccgggaagtttcccggtaagcgtgcgagtgaggacaa 50002997  T
Q  109 aacacgctgaaaaaattcatgttggtttgtggggtcagtc 148  Q
    ||||||||||||| | || |||||||||||||||||||||    
T  50002996 aacacgctgaaaagactcgtgttggtttgtggggtcagtc 50002957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 38341022 - 38341176
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||  | || ||| ||| ||||| ||||||    
T  38341022 cggtagctcattccataagaacttcacagttaagcgtgcttgacttggagcaattttgggatgggtgacctactgggaagtttcccggtaagcgtgcgag 38341121  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    |||| | ||||||||| ||||| | || ||||||||| |||||||||||| ||||    
T  38341122 tgaggacaaaacacgcggaaaagactcgtgttggtttatggggtcagtcggcaat 38341176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 52250322 - 52250476
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| |||||||||||||| ||||||||||||| ||||||||| ||||||||||| |||||||||||||| | || ||| ||| ||||  ||||||    
T  52250322 cggtagctcattccataagaactccacagttaagcgtgcttgacttgaagcaattttggaatgggtgacctaccgggaagtttcccggtaagtgtgcgag 52250421  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    |||| | ||||||||||||||| | || |||||||||||||||||||||||||||    
T  52250422 tgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcgacaat 52250476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 52250659 - 52250813
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| |||||||||||||| ||||||||||||| ||||||||| |||||||||||||||||||||||||| | || ||| ||| ||||  ||||||    
T  52250659 cggtagctcattccataagaactccacagttaagcgtgcttgacttgaagcaattttgggatgggtgacctaccgggaagtttcccggtaagtgtgcgag 52250758  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    |||  | ||||||||||||||| | || |||||||||||||||||||||||||||    
T  52250759 tgaagacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcgacaat 52250813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 52250996 - 52251150
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| |||||||||||||| ||||||||||||| ||||||||| |||||||||||||||||||||||||| | || ||| ||| ||||  ||||||    
T  52250996 cggtagctcattccataagaactccacagttaagcgtgcttgacttgaagcaattttgggatgggtgacctaccgggaagtttcccggtaagtgtgcgag 52251095  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    |||  | ||||||||||||||| | || |||||||||||||||||||||||||||    
T  52251096 tgaagacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcgacaat 52251150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 13 - 154
Target Start/End: Complemental strand, 46693752 - 46693611
Alignment:
Q  13 cataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaaca 112  Q
    ||||| |||| ||||||||||||| |||||||||||||||||||||||||||||||||||| |||| ||| ||| || || |||||||||| | ||||||    
T  46693752 cataataactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccggaaagtttcccggtatgcgtgcgagtgaggacaaaaca 46693653  T
Q  113 cgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    ||||||||| |  | |||||||||||||||||||||||||||    
T  46693652 cgctgaaaagacccgtgttggtttgtggggtcagtcgacaat 46693611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 20060370 - 20060216
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| |||||||||||||| |||||||||| || ||||||||||| |||||||||||||||||||||||| | || ||||||| ||||| ||||||    
T  20060370 cggtagctcattccataagaactccacagttaagtgtgcttgacttggatcaattttgggatgggtgacctaccgggaagttttccggtaagcgtgcgag 20060271  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    |||| | |||||||| || ||| | || |||||||||||||||||||||| ||||    
T  20060270 tgaggacaaaacacgatggaaagactcgtgttggtttgtggggtcagtcggcaat 20060216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 35759638 - 35759484
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| ||||||||||||||||| |||||| ||| ||||||||||||| |||||||||| ||||||||||| | || |||| || ||||| ||||||    
T  35759638 cggtagctcattccataagaacttcatagttaaacgtgcttgacttggagctattttgggattggtgacctaccgggaagtttttcggtaagcgtgcgag 35759539  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    |||| | ||||||||||||||| | || ||||||||| |||||||||||| ||||    
T  35759538 tgaggacaaaacacgctgaaaagactcgtgttggtttttggggtcagtcggcaat 35759484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 51372904 - 51372750
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| |||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||||||||| ||| || |||| || ||||| ||||||    
T  51372904 cggtagctcattccataagaactccacagttaagcgtgcttgactttgagcaattttgggatgggtgacctatcaggaagtttttcggtaagcgtgcgag 51372805  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    |||| | ||||  ||||||||| | || |||||||||||||||||| ||| ||||    
T  51372804 tgaggacaaaatccgctgaaaagactcgtgttggtttgtggggtcaatcggcaat 51372750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 15 - 164
Target Start/End: Complemental strand, 50002722 - 50002573
Alignment:
Q  15 taagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacg 114  Q
    |||||||| || ||||||||||  ||||||||||||||||||||||||| ||||||||| | || ||  ||| ||||| |||||||||| | ||||||||    
T  50002722 taagaactccatagttaagcgtgtttgacttggagcaattttgggatggatgacctaccgggaagttccccggtaagcgtgcgagtgaggacaaaacacg 50002623  T
Q  115 ctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtc 164  Q
    ||||||| | || ||||||||||||||||||||||||||| || ||||||    
T  50002622 ctgaaaagactcgtgttggtttgtggggtcagtcgacaatcctgaaagtc 50002573  T

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Target: chr1; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 9 - 154
Target Start/End: Complemental strand, 43057086 - 43056941
Alignment:
Q  9 attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataa 108  Q
    |||||||||||||| |||||||||||||  ||||||| |||   | || |||||||||||||||  | || ||| ||| |||||||||||||||| | ||    
T  43057086 attccataagaactccacagttaagcgtgattgacttagagtggtctttggatgggtgacctactgggaagtttcccggtaagcatgcgagtgaggacaa 43056987  T
Q  109 aacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    ||||| ||||||||| |  ||||||||||| |||||||||| ||||    
T  43056986 aacacactgaaaaaacttgtgttggtttgtagggtcagtcggcaat 43056941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 37 - 154
Target Start/End: Original strand, 7547790 - 7547907
Alignment:
Q  37 acttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggttt 136  Q
    ||||||||||||| | | || |||||||||||||||| |||| |||| |||||||| ||||||| || | ||||||| |||||||   || ||||| |||    
T  7547790 acttgacttggagtagtgtttggatgggtgacctaccggaaagtttttcgataagcgtgcgagtaaggacaaaacacactgaaaagtctcgtgttgattt 7547889  T
Q  137 gtggggtcagtcgacaat 154  Q
    || |||||||||||||||    
T  7547890 gtagggtcagtcgacaat 7547907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 154
Target Start/End: Complemental strand, 7229960 - 7229819
Alignment:
Q  13 cataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaaca 112  Q
    |||||||||| || || ||||| |  |||||||||||||||||| |||| ||||||||   | ||| |||| ||| |||| ||  |||||| ||||||||    
T  7229960 cataagaactccatagataagcatgtttgacttggagcaattttaggattggtgaccttatataaagtttttcgaaaagcgtgaaagtgaggataaaaca 7229861  T
Q  113 cgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
     |||||||||| || ||||| |||||||||| ||||| ||||    
T  7229860 tgctgaaaaaactcgtgttgctttgtggggtgagtcgtcaat 7229819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 138
Target Start/End: Complemental strand, 43057544 - 43057415
Alignment:
Q  9 attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataa 108  Q
    |||||||||||||| |||||||||||||  |||||||||||   | || |||| ||||||||||  | || ||| ||| |||||||| ||||||||| ||    
T  43057544 attccataagaactccacagttaagcgtgattgacttggagtggtctttggatcggtgacctactgggaagtttcccggtaagcatgtgagtgagaacaa 43057445  T
Q  109 aacacgctgaaaaaattcatgttggtttgt 138  Q
    |||||||| |||| | |  |||||||||||    
T  43057444 aacacgctaaaaagacttgtgttggtttgt 43057415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 50002315 - 50002246
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacc 69  Q
    |||||||| |||||||||||||| ||||||| || || |||||||||||||||||||||||| |||||||    
T  50002315 cggtagctcattccataagaactccacagttgagtgtgcttgacttggagcaattttgggattggtgacc 50002246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 23180855 - 23180995
Alignment:
Q  9 attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataa 108  Q
    |||||||||||| | |||| |||||||| |||||||||||| ||||||||||||||| |||| |  |||| |||| | | ||   |||||||||  | ||    
T  23180855 attccataagaattccacaattaagcgtgcttgacttggagaaattttgggatgggttaccttctggaaagtttttcaaaaaatgtgcgagtgacgacaa 23180954  T
Q  109 aacacgctgaaaaaattcatgttggtttgtggggtcagtcg 149  Q
    |||| |||||||| | | |||||||||||| |||| |||||    
T  23180955 aacatgctgaaaagactaatgttggtttgtcgggttagtcg 23180995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 9 - 172
Target Start/End: Complemental strand, 35010017 - 35009866
Alignment:
Q  9 attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataa 108  Q
    |||||||||||||| ||| ||||||||| |||||||||||| | | || |||||||||||||||| || ||||||||          || ||||| | ||    
T  35010017 attccataagaactccacggttaagcgtgcttgacttggagtagtctttggatgggtgacctacc-gagaattttcc----------cg-gtgaggacaa 35009930  T
Q  109 aacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtcatctggga 172  Q
    ||||| ||||||||| ||||||| |||||| |||||||||| |||| || |||||| |||||||    
T  35009929 aacacactgaaaaaactcatgttcgtttgtagggtcagtcggcaatgctcaaagtcgtctggga 35009866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 70
Target Start/End: Original strand, 8278097 - 8278143
Alignment:
Q  24 cacagttaagcgtacttgacttggagcaattttgggatgggtgacct 70  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||    
T  8278097 cacagttaagcgtgcttgacttgaagcaattttgggatgggtgacct 8278143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 35760935 - 35760873
Alignment:
Q  9 attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgaccta 71  Q
    ||||||| |||||| |  |||||||||| |||||||||||||||||||||||||||| |||||    
T  35760935 attccatgagaactccgtagttaagcgtgcttgacttggagcaattttgggatgggtaaccta 35760873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 56 - 148
Target Start/End: Complemental strand, 31823093 - 31823001
Alignment:
Q  56 tgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtc 148  Q
    |||||||||||||||||  | || |||  || |||||||||||||||| | |||||| |||||||| | || ||||| |||||||||||||||    
T  31823093 tgggatgggtgacctactgggaagtttctcggtaagcatgcgagtgaggacaaaacatgctgaaaagactcgtgttgatttgtggggtcagtc 31823001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 14 - 73
Target Start/End: Original strand, 7548221 - 7548280
Alignment:
Q  14 ataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctacc 73  Q
    ||||||||| |||| ||||||||||||||||||||| | | || ||||||||||||||||    
T  7548221 ataagaactccacaattaagcgtacttgacttggagtagtctttggatgggtgacctacc 7548280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 70
Target Start/End: Original strand, 16907366 - 16907420
Alignment:
Q  16 aagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacct 70  Q
    ||||||| || ||||||||||  ||||||||||||||||||| ||||||||||||    
T  16907366 aagaactccatagttaagcgtgtttgacttggagcaattttgagatgggtgacct 16907420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 148
Target Start/End: Original strand, 2634589 - 2634730
Alignment:
Q  7 ctattccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaat 106  Q
    |||||| ||||||||||||| ||||| ||| |||||||||||| | | || |||||| |||| | |  | || |||||| | |||||||||| |||| ||    
T  2634589 ctattcaataagaacttcactgttaaacgtgcttgacttggagtagtctttggatggatgacattctgggaagttttccaaaaagcatgcgaatgaggat 2634688  T
Q  107 aaaacacgctgaaaaaattcatgttggtttgtggggtcagtc 148  Q
     || ||||||||||| | || |||| ||||||  ||||||||    
T  2634689 gaagcacgctgaaaagactcttgtttgtttgtaaggtcagtc 2634730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 72
Target Start/End: Complemental strand, 31822682 - 31822621
Alignment:
Q  11 tccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctac 72  Q
    |||| ||||||| |||||||||||||  |||||||||| ||||||||||||||  |||||||    
T  31822682 tccaaaagaactccacagttaagcgtttttgacttggaacaattttgggatggacgacctac 31822621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 162
Target Start/End: Complemental strand, 49996613 - 49996548
Alignment:
Q  97 gagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaag 162  Q
    ||||||| | ||||||||||||||| | || |||| ||||||||||||||||| |||| |||||||    
T  49996613 gagtgaggacaaaacacgctgaaaagactcttgttagtttgtggggtcagtcggcaatcctaaaag 49996548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 94 - 154
Target Start/End: Complemental strand, 35760000 - 35759940
Alignment:
Q  94 tgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    |||||| ||| | ||||||||||||||| | || |||||||||||||||||||||| ||||    
T  35760000 tgcgagcgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaat 35759940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 12728117 - 12728157
Alignment:
Q  9 attccataagaacttcacagttaagcgtacttgacttggag 49  Q
    |||||||||||||| ||||||||||| | ||||||||||||    
T  12728117 attccataagaactccacagttaagcatgcttgacttggag 12728157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 90; Significance: 4e-43; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 9 - 154
Target Start/End: Original strand, 50347871 - 50348016
Alignment:
Q  9 attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataa 108  Q
    |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||   || ||| ||||||||  |||||||||| | ||    
T  50347871 attccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgagaagtttcccgataagtgtgcgagtgaggacaa 50347970  T
Q  109 aacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    ||||||||||||| | || |||||||||||||||||||||||||||    
T  50347971 aacacgctgaaaagactcgtgttggtttgtggggtcagtcgacaat 50348016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 8067396 - 8067558
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| |||||||||||||| || |||||||||| |||||||||||||||||||||||||||||||||||| | || ||| ||||||||| ||||||    
T  8067396 cggtagctcattccataagaactccatagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccgataagcgtgcgag 8067495  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaag 162  Q
    |||| | ||||||||||||||| | || |||||||||||| ||||| ||| |||| |||||||    
T  8067496 tgaggacaaaacacgctgaaaagactcgtgttggtttgtgaggtcaatcggcaatcctaaaag 8067558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 13150584 - 13150430
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| | || ||| ||| ||||  ||||||    
T  13150584 cggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagtgtgcgag 13150485  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    |||| | ||||||||||||||| | || ||||| |||||||||||||||||||||    
T  13150484 tgaggacaaaacacgctgaaaagactcgtgttgatttgtggggtcagtcgacaat 13150430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 39653280 - 39653442
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| ||||||| |||||| |||||||||| || |||||||||||||||||||||||||||||||||||| | || ||| ||| ||||  ||||||    
T  39653280 cggtagctcattccatgagaactccacagttaagtgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagtgtgcgag 39653379  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaag 162  Q
    |||| | ||||||||||||||| | || ||||||||||||||||||||||||||| |||||||    
T  39653380 tgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcgacaatgctaaaag 39653442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 10 - 154
Target Start/End: Original strand, 14820280 - 14820424
Alignment:
Q  10 ttccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaa 109  Q
    ||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||||||||| | |||| ||| ||| ||||||||| |||||| | |||    
T  14820280 ttccataagaactccacagttaagcgtgcttgacttggaacaattttgggatgggtgacctatcggaaagtttcccggtaagcatgcaagtgaggacaaa 14820379  T
Q  110 acacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    |||||||||||| | || |||||||||||||||||||||| ||||    
T  14820380 acacgctgaaaagactcgtgttggtttgtggggtcagtcggcaat 14820424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 16811497 - 16811649
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| |||||||||||| | ||||||||||||| |||||||||||||||||||||||||||||||||||| | || ||| ||||||||||||||||    
T  16811497 cggtagctcattccataagaattccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccgataagcatgcgag 16811596  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    |||| | |||  |||||||||| | || |||||||||||||||||||||| ||||    
T  16811597 tgaggacaaa--acgctgaaaagactcgtgttggtttgtggggtcagtcggcaat 16811649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 31284306 - 31284152
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| || | || |||||||| |||| ||||||    
T  31284306 cggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctgccgggaagttttccgacaagcgtgcgag 31284207  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    || | | ||||||||| ||||| | || |||||||||||||||||||||| ||||    
T  31284206 tggggacaaaacacgccgaaaagactcgtgttggtttgtggggtcagtcggcaat 31284152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 27187360 - 27187205
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| ||| |||||||||| ||||||||||||| |||||||| ||||||||||||||||||||||||||| | || ||| ||||||||| ||||||    
T  27187360 cggtagctcatttcataagaactccacagttaagcgtgcttgactttgagcaattttgggatgggtgacctaccgggaagtttcccgataagcgtgcgag 27187261  T
Q  100 tga-gaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    ||| ||  ||||||||||||||| | || |||||||||||||||||||||| ||||    
T  27187260 tgaggacaaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaat 27187205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 7 - 172
Target Start/End: Original strand, 37045158 - 37045320
Alignment:
Q  7 ctattccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaat 106  Q
    |||||||||||||||| ||||||||||||| |||||||||||| | | || |||||||||||||||| | |   || |||||||||||||||||||| |     
T  37045158 ctattccataagaactccacagttaagcgtgcttgacttggagtagtctttggatgggtgacctaccggga---ttcccgataagcatgcgagtgaggac 37045254  T
Q  107 aaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtcatctggga 172  Q
    ||||||||||||||| | || ||||||||||| ||||||||||||||| || |||||| |||||||    
T  37045255 aaaacacgctgaaaagactcgtgttggtttgtagggtcagtcgacaatgcttaaagtcgtctggga 37045320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 11180064 - 11179910
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| ||| |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| | |  ||| ||| ||||  || |||    
T  11180064 cggtagctcatttcataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggatgtttcccggtaagtgtgtgag 11179965  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    |||| | ||||||||||||||| | || |||||||||||||||||||||||||||    
T  11179964 tgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcgacaat 11179910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 32227616 - 32227770
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| ||| |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| | || ||| ||||||||  ||||||    
T  32227616 cggtagctcatttcataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccgataagtgtgcgag 32227715  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    |||| | |||||||  |||||| | || ||||||||||| |||||||||||||||    
T  32227716 tgaggaaaaaacacattgaaaagactcgtgttggtttgtagggtcagtcgacaat 32227770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 9 - 154
Target Start/End: Complemental strand, 13150120 - 13149975
Alignment:
Q  9 attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataa 108  Q
    |||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||| | || |||  || ||||  ||| |||||| | ||    
T  13150120 attccataagaactccacagttaagcgtgcttgacttggagcaattttggaatgggtgacctaccgggaagtttctcggtaagtgtgcaagtgaggacaa 13150021  T
Q  109 aacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    ||||||||||||| | || |||||||||||||||||||||||||||    
T  13150020 aacacgctgaaaagactcgtgttggtttgtggggtcagtcgacaat 13149975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 28561862 - 28562010
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||  | || ||| ||| ||||| ||||||    
T  28561862 cggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggat-ggtgacctacggggaagtttcccggtaagcgtgcgag 28561960  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcg 149  Q
    |||| | ||||||||||||||| | || ||||||||||||||||||||||    
T  28561961 tgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcg 28562010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 13 - 154
Target Start/End: Complemental strand, 32227238 - 32227097
Alignment:
Q  13 cataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaaca 112  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| | || ||| ||| ||||  |||||||||| | ||||||    
T  32227238 cataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagtgtgcgagtgaggaaaaaaca 32227139  T
Q  113 cgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    |  |||||| | || |||||||||||||||||||||||||||    
T  32227138 cattgaaaagactcgtgttggtttgtggggtcagtcgacaat 32227097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 10 - 162
Target Start/End: Original strand, 14814075 - 14814227
Alignment:
Q  10 ttccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaa 109  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||  ||  ||| ||| ||||| |||||||||  | |||    
T  14814075 ttccataagaactccacagttaagcgtgcttgacttggagcaattttgtgatgggtgacctaccgaaaggtttcccggtaagcgtgcgagtgaagacaaa 14814174  T
Q  110 acacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaag 162  Q
    |||||||||||| | || |||||||||||||||| ||||| ||||||| ||||    
T  14814175 acacgctgaaaagactcgtgttggtttgtggggttagtcggcaatactgaaag 14814227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 16811041 - 16811213
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| ||||||||||||||||||| ||||| || ||||||||| |||||||||||||||||||||||||| | || ||| ||  ||||| ||||||    
T  16811041 cggtagctcattccataagaacttcacatttaagtgtgcttgacttgtagcaattttgggatgggtgacctaccgggaagtttccccgtaagcgtgcgag 16811140  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtcatctggga 172  Q
    |||| | |||| |||||||||| |||| ||||||||||||||||| |||| |||| || ||||  ||||||||    
T  16811141 tgaggacaaaatacgctgaaaagattcgtgttggtttgtggggtcggtcggcaatcctgaaagcaatctggga 16811213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 9 - 154
Target Start/End: Complemental strand, 32386755 - 32386610
Alignment:
Q  9 attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataa 108  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| ||| |||| |||   | ||||| | |||||||| | ||    
T  32386755 attccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacccaccggaaagtttcttggtaagcgtccgagtgaggacaa 32386656  T
Q  109 aacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    |||||||| |||| | || |||||||||||||||||||||| ||||    
T  32386655 aacacgctaaaaagactcgtgttggtttgtggggtcagtcggcaat 32386610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 9 - 148
Target Start/End: Complemental strand, 20885138 - 20884999
Alignment:
Q  9 attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataa 108  Q
    |||||||||||||| |||| |||||||| |||||||||||| | | || |||||||||||||||| | |||||| ||| ||||| ||| ||| || | ||    
T  20885138 attccataagaactccacaattaagcgtgcttgacttggagtagtatttggatgggtgacctaccgggaaatttcccgttaagcgtgcaagttaggacaa 20885039  T
Q  109 aacacgctgaaaaaattcatgttggtttgtggggtcagtc 148  Q
    ||||||||||||| | || ||||||||||| |||||||||    
T  20885038 aacacgctgaaaagactcgtgttggtttgtagggtcagtc 20884999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 13 - 170
Target Start/End: Complemental strand, 4067377 - 4067220
Alignment:
Q  13 cataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaaca 112  Q
    |||||||||| ||||||||||||| |||||||||||| | | || |||||| ||||||||| |||| ||||| | ||||| ||| |||||| | ||||||    
T  4067377 cataagaactccacagttaagcgtgcttgacttggagtagtctttggatggatgacctaccggaaagttttctggtaagcgtgcaagtgaggacaaaaca 4067278  T
Q  113 cgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtcatctgg 170  Q
    ||||||||| |    ||||||||||| |||||||||| |||| || |||||| |||||    
T  4067277 cgctgaaaagaccagtgttggtttgtagggtcagtcggcaatgcttaaagtcgtctgg 4067220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 9 - 172
Target Start/End: Complemental strand, 25238705 - 25238542
Alignment:
Q  9 attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataa 108  Q
    |||||||||||||| ||||||||||||| |||||||||||| | | || |||| ||||||||| | | || ||||  | |||||||||||||||| | ||    
T  25238705 attccataagaactccacagttaagcgtgcttgacttggagtagtctttggattggtgacctatcgggaagttttttggtaagcatgcgagtgaggacaa 25238606  T
Q  109 aacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtcatctggga 172  Q
    ||||||||||||| | || |||||||||||  |||| |||| ||||  | |||||| |||||||    
T  25238605 aacacgctgaaaagactcgtgttggtttgtatggtcggtcggcaatggttaaagtcgtctggga 25238542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 9 - 164
Target Start/End: Complemental strand, 25230269 - 25230114
Alignment:
Q  9 attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataa 108  Q
    |||| ||||||||| |||||||| |||| |||||||||||| | | ||  ||||||||||||| ||| || ||||||| |||||  ||||||||| | ||    
T  25230269 attcaataagaactccacagttatgcgtgcttgacttggagtagtcttatgatgggtgacctatcaggaagttttccggtaagcgagcgagtgaggacaa 25230170  T
Q  109 aacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtc 164  Q
    |||||| || ||| | |  ||||||||||| ||||||||||||||| || ||||||    
T  25230169 aacacgttggaaagactagtgttggtttgtagggtcagtcgacaatgcttaaagtc 25230114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 9 - 164
Target Start/End: Complemental strand, 25237856 - 25237701
Alignment:
Q  9 attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataa 108  Q
    |||| ||||||||| |||||||| |||| |||||||||||| | | ||  ||||||||||||| ||| || ||||||| |||||  ||||||||| | ||    
T  25237856 attcaataagaactccacagttatgcgtgcttgacttggagtagtcttatgatgggtgacctatcaggaagttttccggtaagcgagcgagtgaggacaa 25237757  T
Q  109 aacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtc 164  Q
    |||||| || ||| | |  ||||||||||| ||||||||||||||| || ||||||    
T  25237756 aacacgttggaaagactagtgttggtttgtagggtcagtcgacaatgcttaaagtc 25237701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 29224452 - 29224510
Alignment:
Q  12 ccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacct 70  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  29224452 ccataagaacttcacaattaagcgtgcttgacttggagcaattttgggatgggtgacct 29224510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 13 - 154
Target Start/End: Complemental strand, 53150829 - 53150688
Alignment:
Q  13 cataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacc-taccagaaaattttccgataagcatgcgagtgagaataaaac 111  Q
    |||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||| ||  || || ||| || | ||||  ||||||||| | |||||    
T  53150829 cataagaacttcacagttaaccgtgcttaacttggagcaattttgggatgggtgaccttatgag-aagtttcccaaaaagcgggcgagtgaggacaaaac 53150731  T
Q  112 acgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    | | |||||| | ||||||| |||||||||||||||| |||||    
T  53150730 atgttgaaaagactcatgttagtttgtggggtcagtcaacaat 53150688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 12 - 164
Target Start/End: Original strand, 7494009 - 7494161
Alignment:
Q  12 ccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaac 111  Q
    ||||||||||| |||| |||||| | ||||||||||||   | || | |||| |||||| | || |||||| |||  |||| |||||||||||| ||| |    
T  7494009 ccataagaactccacatttaagcatgcttgacttggagttgtcttagcatggctgaccttctaggaaatttcccgtaaagcgtgcgagtgagaacaaagc 7494108  T
Q  112 acgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtc 164  Q
    ||| |||||| | |||||||||| ||||||||||||||||||| || ||||||    
T  7494109 acgttgaaaagactcatgttggtatgtggggtcagtcgacaattcttaaagtc 7494161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 9 - 163
Target Start/End: Original strand, 30529812 - 30529965
Alignment:
Q  9 attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataa 108  Q
    ||||||||||||||||| |||||||||| |||||||||||| | | || |||||||||||||| | | || ||| ||  |||||||||||||||| | ||    
T  30529812 attccataagaacttcatagttaagcgtgcttgacttggagtagtctttggatgggtgaccta-ctggaagtttcccagtaagcatgcgagtgaggacaa 30529910  T
Q  109 aacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagt 163  Q
    |||||||| |||| | |  ||||||||||  |||| ||||| |||| || |||||    
T  30529911 aacacgctaaaaagacttgtgttggtttgcagggttagtcggcaatgcttaaagt 30529965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 9 - 154
Target Start/End: Complemental strand, 25230726 - 25230581
Alignment:
Q  9 attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataa 108  Q
    ||||||||||||||  ||| |||||||| |||||||||||| | | ||  |||||||| |||||  | || ||| ||| ||||| |||||||||||  ||    
T  25230726 attccataagaactcaacaattaagcgtgcttgacttggagtagtcttatgatgggtgccctactgggaagtttcccggtaagcgtgcgagtgagatcaa 25230627  T
Q  109 aacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    ||||||||| ||| | || ||||||||||| ||||||||| |||||    
T  25230626 aacacgctggaaagactcgtgttggtttgtagggtcagtctacaat 25230581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 9 - 154
Target Start/End: Complemental strand, 25238313 - 25238168
Alignment:
Q  9 attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataa 108  Q
    ||||||||||||||  ||| |||||||| |||||||||||| | | ||  |||||||| |||||  | || ||| ||| ||||| |||||||||||  ||    
T  25238313 attccataagaactcaacaattaagcgtgcttgacttggagtagtcttatgatgggtgccctactgggaagtttcccggtaagcgtgcgagtgagatcaa 25238214  T
Q  109 aacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    ||||||||| ||| | || ||||||||||| ||||||||| |||||    
T  25238213 aacacgctggaaagactcgtgttggtttgtagggtcagtctacaat 25238168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 78
Target Start/End: Original strand, 41472425 - 41472494
Alignment:
Q  9 attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaa 78  Q
    |||||||||||||| ||| ||||| ||| ||||||||| | |||||||||||||||||||||||| ||||    
T  41472425 attccataagaactccacggttaaacgtgcttgacttgaaacaattttgggatgggtgacctaccggaaa 41472494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 78
Target Start/End: Original strand, 41474122 - 41474191
Alignment:
Q  9 attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaa 78  Q
    |||| |||| |||| |||||| |||||| ||||||||||| ||||||||||||||||||| |||||||||    
T  41474122 attctataaaaactccacagtcaagcgtgcttgacttggaacaattttgggatgggtgacataccagaaa 41474191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 12 - 164
Target Start/End: Original strand, 7477319 - 7477471
Alignment:
Q  12 ccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaac 111  Q
    ||||||||||| |||| |||||| | |||||||| ||| | | || |||||| ||||||    | ||||||  ||  |||| |||||||||||| ||| |    
T  7477319 ccataagaactccacatttaagcatgcttgacttagagtagtcttaggatggctgaccttatgggaaatttctcggaaagcgtgcgagtgagaacaaagc 7477418  T
Q  112 acgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtc 164  Q
    ||| |||||| | |||||||||| ||||||||||||||||||| || ||||||    
T  7477419 acgttgaaaagactcatgttggtatgtggggtcagtcgacaattcttaaagtc 7477471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 162
Target Start/End: Original strand, 25248236 - 25248390
Alignment:
Q  9 attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataa 108  Q
    ||||||||| |||| ||| ||| ||||| |||||||||||| | | ||  ||||| ||||||||| | || |||  || ||||| |||||||||| | ||    
T  25248236 attccataataactccacggttcagcgtgcttgacttggagtagtcttatgatggatgacctaccgggaagtttcacggtaagcgtgcgagtgaggacaa 25248335  T
Q  109 aacacgctgaaaaa-attcatgttggtttgtggggtcagtcgacaatactaaaag 162  Q
    |||||| ||||||| | || ||||| |||||| ||| |||||||||| |||||||    
T  25248336 aacacgttgaaaaagactcgtgttgatttgtgaggttagtcgacaatcctaaaag 25248390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 156
Target Start/End: Original strand, 15405674 - 15405818
Alignment:
Q  12 ccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaac 111  Q
    |||| |||||| || ||||||  || ||||||||||| ||||||||||||||||||||| |  | || |||||| | |||  ||| |||||| | ||| |    
T  15405674 ccattagaactccaaagttaaatgtgcttgacttggatcaattttgggatgggtgaccttctgggaagttttcctaaaagtgtgcaagtgaggacaaagc 15405773  T
Q  112 acgctgaaaaaattcatgttggtttgtggggtcagtcgacaatac 156  Q
    ||||||||| ||  | |||||||||||  |||||| |||||||||    
T  15405774 acgctgaaagaacccgtgttggtttgtaaggtcaggcgacaatac 15405818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 88 - 164
Target Start/End: Complemental strand, 25239069 - 25238993
Alignment:
Q  88 taagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtc 164  Q
    ||||| || ||||||| | ||||||||||||||| | || ||||||||||| ||||||||||||||| || ||||||    
T  25239069 taagcgtgtgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtagggtcagtcgacaatgcttaaagtc 25238993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 9 - 72
Target Start/End: Original strand, 39641062 - 39641125
Alignment:
Q  9 attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctac 72  Q
    |||||||||||||| |||||||||||||  ||||||||||||| | || |||| ||||||||||    
T  39641062 attccataagaactccacagttaagcgtgtttgacttggagcagtctttggattggtgacctac 39641125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 15377412 - 15377470
Alignment:
Q  12 ccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacct 70  Q
    |||| |||||| |||||||||  || ||||||||||| |||||||||||||||||||||    
T  15377412 ccattagaactccacagttaaatgtgcttgacttggatcaattttgggatgggtgacct 15377470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 88 - 154
Target Start/End: Original strand, 41473745 - 41473811
Alignment:
Q  88 taagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    ||||| |||||||||| | ||||||||||||||| |  | |||||||||||||||||||||| ||||    
T  41473745 taagcgtgcgagtgaggacaaaacacgctgaaaagacccgtgttggtttgtggggtcagtcgccaat 41473811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 2911220 - 2911281
Alignment:
Q  9 attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacct 70  Q
    |||||||||||||| ||||||||||||| |||||||||||| | | || ||||| |||||||    
T  2911220 attccataagaactccacagttaagcgtgcttgacttggagtagtctttggatgagtgacct 2911281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 3899929 - 3899986
Alignment:
Q  13 cataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacct 70  Q
    |||||||||| |||| | |||| | ||||||||||||||||||||| |||||||||||    
T  3899929 cataagaactccacaataaagcatgcttgacttggagcaattttggtatgggtgacct 3899986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 12 - 156
Target Start/End: Original strand, 15388271 - 15388415
Alignment:
Q  12 ccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaac 111  Q
    |||| |||||| || ||||||  || ||||||||||| ||||||||||||||||||||| |  | || |||||| | |||  ||| |||||| | | | |    
T  15388271 ccatcagaactccaaagttaaatgtgcttgacttggatcaattttgggatgggtgaccttctgggaagttttcctaaaagtgtgcaagtgaggacatagc 15388370  T
Q  112 acgctgaaaaaattcatgttggtttgtggggtcagtcgacaatac 156  Q
    ||||||||| || || |||||||||||  ||| || |||||||||    
T  15388371 acgctgaaagaactcgtgttggtttgtaaggtaaggcgacaatac 15388415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 12 - 156
Target Start/End: Original strand, 15392638 - 15392782
Alignment:
Q  12 ccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaac 111  Q
    |||| |||||| || ||||||  || ||||||||||| ||||||||||||||||||||| |  | || |||||| | |||  ||| |||||| | | | |    
T  15392638 ccatcagaactccaaagttaaatgtgcttgacttggatcaattttgggatgggtgaccttctgggaagttttcctaaaagtgtgcaagtgaggacatagc 15392737  T
Q  112 acgctgaaaaaattcatgttggtttgtggggtcagtcgacaatac 156  Q
    ||||||||| || || |||||||||||  ||| || |||||||||    
T  15392738 acgctgaaagaactcgtgttggtttgtaaggtaaggcgacaatac 15392782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 15411083 - 15411141
Alignment:
Q  12 ccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacct 70  Q
    |||| |||||| || ||||||  || ||||||||||| |||||||||||||||||||||    
T  15411083 ccattagaactccaaagttaaatgtgcttgacttggatcaattttgggatgggtgacct 15411141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 15417499 - 15417557
Alignment:
Q  12 ccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacct 70  Q
    |||| |||||| || ||||||  || ||||||||||| |||||||||||||||||||||    
T  15417499 ccattagaactccaaagttaaatgtgcttgacttggatcaattttgggatgggtgacct 15417557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 89 - 138
Target Start/End: Original strand, 18318860 - 18318909
Alignment:
Q  89 aagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgt 138  Q
    |||| |||||||||||| ||||||||||||||| ||||  ||||||||||    
T  18318860 aagcgtgcgagtgagaacaaaacacgctgaaaagattcgggttggtttgt 18318909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 88 - 164
Target Start/End: Original strand, 2911288 - 2911364
Alignment:
Q  88 taagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtc 164  Q
    ||||| |||||||||| | |||||||| |||||| | || ||||||||||| || ||| |||||||| || ||||||    
T  2911288 taagcgtgcgagtgaggacaaaacacgttgaaaagactcgtgttggtttgtaggatcaatcgacaatgcttaaagtc 2911364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 12 - 64
Target Start/End: Original strand, 15381258 - 15381310
Alignment:
Q  12 ccataagaacttcacagttaagcgtacttgacttggagcaattttgggatggg 64  Q
    ||||||||||| |||| ||||| || ||||||||||| |||||||| ||||||    
T  15381258 ccataagaactccacatttaagtgtgcttgacttggatcaattttgagatggg 15381310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 12 - 64
Target Start/End: Original strand, 15396493 - 15396545
Alignment:
Q  12 ccataagaacttcacagttaagcgtacttgacttggagcaattttgggatggg 64  Q
    ||||||||||| |||| ||||| || ||||||||||| |||||||| ||||||    
T  15396493 ccataagaactccacatttaagtgtgcttgacttggatcaattttgagatggg 15396545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 12 - 64
Target Start/End: Original strand, 15410629 - 15410681
Alignment:
Q  12 ccataagaacttcacagttaagcgtacttgacttggagcaattttgggatggg 64  Q
    ||||||||||| |||| ||||| || ||||||||||| |||||||| ||||||    
T  15410629 ccataagaactccacatttaagtgtgcttgacttggatcaattttgagatggg 15410681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 89; Significance: 1e-42; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 8 - 172
Target Start/End: Complemental strand, 2232 - 2068
Alignment:
Q  8 tattccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaata 107  Q
    |||||||||||||||  | |||||||||| |||||||||||||||||||||||||||||||||||| | || ||||||| ||||| |||||||||| | |    
T  2232 tattccataagaactcaatagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagttttccggtaagcgtgcgagtgaggaca 2133  T
Q  108 aaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtcatctggga 172  Q
    ||||||  |||||| | || ||||||||||||||||||||||||||| ||||||||  |||||||    
T  2132 aaacacattgaaaagactcgtgttggtttgtggggtcagtcgacaatcctaaaagttgtctggga 2068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 84; Significance: 1e-39; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 426 - 589
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| ||||||||| | || || |||||||||| |||||| ||||||||||||||||||||||||||||| | || ||| |||||||||||| |||    
T  426 cggtagctcattccataaaatctccatagttaagcgtgcttgacatggagcaattttgggatgggtgacctaccgggaagtttcccgataagcatgtgag 525  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagt 163  Q
    |||| | ||||||||||||||| | || |||||||||||||||||||||| |||| ||||||||    
T  526 tgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctaaaagt 589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 84; Significance: 1e-39; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 10416 - 10578
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| |||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||| | || ||| | | ||||| ||||||    
T  10416 cggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgg-atgggtgacctaccgggaagtttcctggtaagcgtgcgag 10514  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagt 163  Q
    |||| | ||||||||||||||| | || ||||||||||||||||||||||||||| || |||||    
T  10515 tgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcgacaatgctgaaagt 10578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322 (Bit Score: 83; Significance: 6e-39; HSPs: 1)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 19082 - 19236
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| ||| |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| | || ||| ||| ||||| || |||    
T  19082 cggtagctcatttcataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagcgtgtgag 19181  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    |||| | ||||||||||||||| | || |||||||||||||||||||||| ||||    
T  19182 tgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaat 19236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 83; Significance: 6e-39; HSPs: 1)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 14732 - 14578
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| | || ||| ||| ||||  ||||||    
T  14732 cggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagtgtgcgag 14633  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    |||| | |||||| |||||||| | || ||||||||||||||||||| |||||||    
T  14632 tgaggacaaaacatgctgaaaagactcgtgttggtttgtggggtcagccgacaat 14578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 83; Significance: 6e-39; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 8 - 154
Target Start/End: Complemental strand, 7678638 - 7678492
Alignment:
Q  8 tattccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaata 107  Q
    ||||||||||||||| |||||||||| || |||||||||||||||||||||||||||||||||||| | || ||| ||| ||||  |||||||||| | |    
T  7678638 tattccataagaactccacagttaagtgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagtgtgcgagtgaggaca 7678539  T
Q  108 aaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    |||||||||||||| | || ||| |||||||||||||||||||||||    
T  7678538 aaacacgctgaaaagactcgtgtaggtttgtggggtcagtcgacaat 7678492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 35871743 - 35871897
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| | |||| ||| ||| ||| | ||||||    
T  35871743 cggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctatcggaaagtttcccggtaaacgtgcgag 35871842  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    |||| | ||||||||||||||| | || |||||||||||||| ||||||| ||||    
T  35871843 tgaggacaaaacacgctgaaaagactcgtgttggtttgtgggatcagtcggcaat 35871897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 9 - 171
Target Start/End: Complemental strand, 44470890 - 44470728
Alignment:
Q  9 attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataa 108  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||| | || ||| ||| ||||| |||||||||| | ||    
T  44470890 attccataagaactccacagttaagcgtgcttgacttggagcaattttgggatggttgacctaccgggaagtttcccggtaagcgtgcgagtgaggacaa 44470791  T
Q  109 aacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtcatctggg 171  Q
    ||||||||| ||| | || ||||||||||| ||||||||| ||||| || |||||| ||||||    
T  44470790 aacacgctggaaagactcgtgttggtttgtagggtcagtcaacaattcttaaagtcgtctggg 44470728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 44471349 - 44471185
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| |||||||||||||| ||||||||||||| ||||| |||||||||||||||||||||||||||||| | |||||| ||| |||||  |||||    
T  44471349 cggtagctcattccataagaactccacagttaagcgtgcttgatttggagcaattttgggatgggtgacctaccgggaaatttcccggtaagcgggcgag 44471250  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtc 164  Q
    |||| | |||||| |||| ||| | || ||||||||||| ||||||||||||||| || ||||||    
T  44471249 tgaggacaaaacatgctggaaagactcgtgttggtttgtagggtcagtcgacaattcttaaagtc 44471185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 49998752 - 49998906
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| |||||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||| | || ||| ||| ||||  ||||||    
T  49998752 cggtagctcattccataagaactccacagttaagcgtgtttgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagtgtgcgag 49998851  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    |||| | ||||||||||||||| | || ||||||||||||||| |||||| ||||    
T  49998852 tgaggacaaaacacgctgaaaagactcgtgttggtttgtggggacagtcggcaat 49998906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 9 - 172
Target Start/End: Complemental strand, 23943257 - 23943094
Alignment:
Q  9 attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataa 108  Q
    |||||||||||||| ||||||||||||| |||||||||||| | | || |||||||||||| ||| | || ||| ||| ||||| |||||||||| | ||    
T  23943257 attccataagaactccacagttaagcgtgcttgacttggagtagtctttggatgggtgaccaaccgggaagtttcccggtaagcgtgcgagtgaggacaa 23943158  T
Q  109 aacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtcatctggga 172  Q
    ||||||||||||| | || ||||||||||| ||||||||||||||| || |||||| |||||||    
T  23943157 aacacgctgaaaagactcgtgttggtttgtagggtcagtcgacaatgcttaaagtcgtctggga 23943094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 9 - 141
Target Start/End: Complemental strand, 4127904 - 4127772
Alignment:
Q  9 attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataa 108  Q
    ||||||||||||||||| |||||||||| |||| ||| |||||||||||||||||||||||||||  ||| ||||||| ||||| || ||||||| | ||    
T  4127904 attccataagaacttcagagttaagcgtgcttggcttagagcaattttgggatgggtgacctaccgaaaagttttccggtaagcgtgtgagtgaggacaa 4127805  T
Q  109 aacacgctgaaaaaattcatgttggtttgtggg 141  Q
    ||||||||||||| | || ||||||||||||||    
T  4127804 aacacgctgaaaagactcgtgttggtttgtggg 4127772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 9 - 172
Target Start/End: Original strand, 21067856 - 21068019
Alignment:
Q  9 attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataa 108  Q
    |||||||||||||||||||||||||||| ||||||||| || | | || |||||||||||||||| | || ||| ||| ||| | |||||||||| | ||    
T  21067856 attccataagaacttcacagttaagcgtgcttgacttgaagtagtctttggatgggtgacctaccgggaagtttaccggtaaacgtgcgagtgaggacaa 21067955  T
Q  109 aacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtcatctggga 172  Q
    ||||| |||||||||||| ||||||||||| || | ||||| |||| || ||||||||||||||    
T  21067956 aacacactgaaaaaattcgtgttggtttgtaggcttagtcggcaatgcttaaagtcatctggga 21068019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 10 - 154
Target Start/End: Complemental strand, 24629447 - 24629306
Alignment:
Q  10 ttccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaa 109  Q
    ||||||||||| | ||||||||||||| |||||||||||||||||||||||||||||||||||| | |||    ||| ||||| |||||||||| | |||    
T  24629447 ttccataagaattccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaaa---cccggtaagcgtgcgagtgaggacaaa 24629351  T
Q  110 acacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    |||||||||||| | || |||| ||||||||||||||||| ||||    
T  24629350 acacgctgaaaagactcgtgttagtttgtggggtcagtcggcaat 24629306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 10 - 154
Target Start/End: Complemental strand, 23350297 - 23350153
Alignment:
Q  10 ttccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttc-cgataagcatgcgagtgagaataa 108  Q
    |||||||||||||||| |||||||||| |||||||||||||||||||||||||| ||||||||| || || |||| |  ||||| || ||||||| | ||    
T  23350297 ttccataagaacttcatagttaagcgtgcttgacttggagcaattttgggatggatgacctacc-gagaagtttctctgtaagcgtgtgagtgaggacaa 23350199  T
Q  109 aacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    ||||| ||||||| | || |||||||||||||||||||||| ||||    
T  23350198 aacacactgaaaagactcgtgttggtttgtggggtcagtcggcaat 23350153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 10 - 154
Target Start/End: Complemental strand, 4127432 - 4127288
Alignment:
Q  10 ttccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaa 109  Q
    ||||||||||||| ||||||||||| |  ||| ||||||||||||||||||||||||| ||| | | || ||| ||| ||||| || ||||||| | |||    
T  4127432 ttccataagaactccacagttaagcatgattggcttggagcaattttgggatgggtgagctatcgggaagtttcccggtaagcgtgtgagtgaggacaaa 4127333  T
Q  110 acacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    |||||||||||| | || |||||||||||||||||||||| ||||    
T  4127332 acacgctgaaaagactcgtgttggtttgtggggtcagtcggcaat 4127288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 12692023 - 12691907
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||  | || ||| ||| ||||| ||||||    
T  12692023 cggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctactgggaagtttcccggtaagcgtgcgag 12691924  T
Q  100 tgagaataaaacacgct 116  Q
    |||| | ||||||||||    
T  12691923 tgaggacaaaacacgct 12691907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 50814849 - 50814730
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||| | || ||| ||| ||| | ||||||    
T  50814849 cggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatggatgacctaccgggaagtttcccggtaaacgtgcgag 50814750  T
Q  100 tgagaataaaacacgctgaa 119  Q
    |||| | |||||||||||||    
T  50814749 tgaggacaaaacacgctgaa 50814730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 11 - 164
Target Start/End: Original strand, 3169333 - 3169486
Alignment:
Q  11 tccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaa 110  Q
    |||||||||||| |||| |||||||| |||||||||||| | | || ||||| ||||||||||||||| |||   | ||||| |||||||||| | ||||    
T  3169333 tccataagaactccacacttaagcgtgcttgacttggagtagtctttggatgagtgacctaccagaaagtttcttggtaagcgtgcgagtgaggacaaaa 3169432  T
Q  111 cacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtc 164  Q
    |||| |||||| | || ||||||||||| |||||||| | ||||||| ||||||    
T  3169433 cacgttgaaaatactcgtgttggtttgtagggtcagttggcaatacttaaagtc 3169486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 9 - 164
Target Start/End: Complemental strand, 1645764 - 1645609
Alignment:
Q  9 attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataa 108  Q
    |||||||||||||| ||||||||||||| |||||||||||| | | || |||||||||||||||||| || |||     ||||| |||||||||| | ||    
T  1645764 attccataagaactccacagttaagcgtgcttgacttggagtagtctttggatgggtgacctaccaggaagtttctttgtaagcgtgcgagtgaggacaa 1645665  T
Q  109 aacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtc 164  Q
    |||||| |||||| | || ||||||||||| |||||||| | |||| || ||||||    
T  1645664 aacacgttgaaaagactcgtgttggtttgtagggtcagttggcaatgcttaaagtc 1645609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 9 - 172
Target Start/End: Complemental strand, 9423873 - 9423710
Alignment:
Q  9 attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataa 108  Q
    |||||||||||| |||||| ||||| || ||||| |||||| | | || |||||||||||||||| | |||||| ||| |||||||||||||||| | ||    
T  9423873 attccataagaatttcacaattaagtgtgcttgaattggagtagtcttaggatgggtgacctaccgggaaatttcccgttaagcatgcgagtgaggacaa 9423774  T
Q  109 aacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtcatctggga 172  Q
    ||||||||||||| | || ||||||| |||  |||| || | |||| || |||||||| |||||    
T  9423773 aacacgctgaaaagactcgtgttggtgtgtacggtccgttggcaatgcttaaagtcatttggga 9423710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 24628991 - 24628928
Alignment:
Q  10 ttccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctacc 73  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  24628991 ttccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctacc 24628928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 12 - 154
Target Start/End: Complemental strand, 27578469 - 27578327
Alignment:
Q  12 ccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaac 111  Q
    ||||||||||| || |||||||||| |||||||| || ||||||||||||| | ||||| |  | || |||||||| |||| |||||||||| | |||||    
T  27578469 ccataagaactccatagttaagcgtgcttgacttcgaacaattttgggatgagcgaccttctgggaagttttccgacaagcgtgcgagtgaggacaaaac 27578370  T
Q  112 acgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    |||| ||||| | || || ||||||||||| |||||| |||||    
T  27578369 acgcagaaaagactcgtgatggtttgtgggatcagtcaacaat 27578327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 50398562 - 50398408
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| |||||||||||||| || |||||||||| |||||||||||| | | ||  ||||||||||||||| | || ||| ||| ||||| ||||||    
T  50398562 cggtagctcattccataagaactccatagttaagcgtgcttgacttggagtattcttatgatgggtgacctaccgggaagtttaccggtaagcgtgcgag 50398463  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    |||| | |||| || ||| ||| | || ||||||||||| |||||||||| ||||    
T  50398462 tgaggacaaaatacactggaaagactcgtgttggtttgtagggtcagtcggcaat 50398408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 9 - 120
Target Start/End: Complemental strand, 23942804 - 23942693
Alignment:
Q  9 attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataa 108  Q
    |||||||||||||| ||||||||||||| |||||||||||| | | || |||||| ||||||||| |||| ||| |  |||||| |||||||||| | ||    
T  23942804 attccataagaactccacagttaagcgtgcttgacttggagtagtctttggatggatgacctaccggaaagtttccaaataagcgtgcgagtgaggacaa 23942705  T
Q  109 aacacgctgaaa 120  Q
    |||||| |||||    
T  23942704 aacacgttgaaa 23942693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 51331305 - 51331144
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| ||| |||||||||| ||||||||||||| |||||||||||| | | ||  ||||||||||||||| | ||||||| |||||||| |||||     
T  51331305 cggtagctcatttcataagaactccacagttaagcgtgcttgacttggagtattcttatgatgggtgacctaccgggaaatttt-cgataagcgtgcgaa 51331207  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagt 163  Q
    |||| | ||||||| ||| ||| | || | || |||||| |||||||||| |||| ||||||||    
T  51331206 tgaggacaaaacacactg-aaagactcgtattagtttgtagggtcagtcggcaatcctaaaagt 51331144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 1464263 - 1464424
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| ||| ||||||||||||||| || ||||| ||| ||||||||||||||||||||||||||||| |    || |||||| | || | ||||||    
T  1464263 cggtagctcatttcataagaacttcacaatttagcgtgcttaacttggagcaattttgggatgggtgaccttctgagaagttttccaaaaaacgtgcgag 1464362  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaag 162  Q
    | || | | ||||||||| ||||| || ||||| ||||||||||| ||||| ||| |||||||    
T  1464363 ttaggacacaacacgctg-aaaaactcgtgttgatttgtggggtcggtcgataatcctaaaag 1464424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 24 - 154
Target Start/End: Original strand, 13266226 - 13266356
Alignment:
Q  24 cacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaa 123  Q
    ||||||||||||| |||||||| ||| |||||| |||||||||||||    | || |||||||| |||  |||||||||| | |||||| | |||||| |    
T  13266226 cacagttaagcgtgcttgactttgagaaattttaggatgggtgaccttttgggaagttttccgaaaagtgtgcgagtgaggagaaaacatgttgaaaaga 13266325  T
Q  124 ttcatgttggtttgtggggtcagtcgacaat 154  Q
     |  |||||||||||||||||||||||||||    
T  13266326 cttgtgttggtttgtggggtcagtcgacaat 13266356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 9 - 147
Target Start/End: Original strand, 27026627 - 27026765
Alignment:
Q  9 attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataa 108  Q
    |||||||||||||| |  |||||||||| ||||||||| ||||||||||||| ||||||||| | || || ||| || | |||| || || |||| | ||    
T  27026627 attccataagaactacgtagttaagcgtgcttgacttgaagcaattttgggaagggtgaccttctaggaagtttaccaaaaagcgtgtgactgaggaaaa 27026726  T
Q  109 aacacgctgaaaaaattcatgttggtttgtggggtcagt 147  Q
    ||||||||||||| | || |||| |||||||||| ||||    
T  27026727 aacacgctgaaaagactcgtgtttgtttgtggggccagt 27026765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 14 - 172
Target Start/End: Original strand, 33764990 - 33765148
Alignment:
Q  14 ataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacac 113  Q
    |||||||||||||| |||||||| ||||| ||||| ||||||||||||||||||| | | || |  |||| | | ||||||| ||| |||   |||||||    
T  33764990 ataagaacttcacacttaagcgtgcttgatttggatcaattttgggatgggtgactttctaggagttttttcaaaaagcatgtgagcgaggtcaaaacac 33765089  T
Q  114 gctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtcatctggga 172  Q
     || |||| | || |||||||||||| ||||| |||||||| || |||||||| |||||    
T  33765090 actaaaaagactcgtgttggtttgtgaggtcaatcgacaatgcttaaagtcatatggga 33765148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 39 - 172
Target Start/End: Original strand, 40607086 - 40607219
Alignment:
Q  39 ttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgt 138  Q
    |||| ||||||||| |||||||||||||||||||| |||| |||  || ||||| | |||||||| | |||| |||||||||||| || ||||| |||||    
T  40607086 ttgatttggagcaaatttgggatgggtgacctaccggaaagtttatcggtaagcgttcgagtgaggacaaaatacgctgaaaaaactcgtgttgatttgt 40607185  T
Q  139 ggggtcagtcgacaatactaaaagtcatctggga 172  Q
    ||  ||||||| |||| || || ||| |||||||    
T  40607186 ggaatcagtcggcaatgcttaaggtcgtctggga 40607219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 10 - 70
Target Start/End: Complemental strand, 11828499 - 11828439
Alignment:
Q  10 ttccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacct 70  Q
    ||||||||||||| ||||||||||||| ||| |||||||||| ||||||||||||||||||    
T  11828499 ttccataagaactccacagttaagcgtgctttacttggagcatttttgggatgggtgacct 11828439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 24 - 172
Target Start/End: Original strand, 21067422 - 21067570
Alignment:
Q  24 cacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaa 123  Q
    |||| |||||||| |||||||||||| | | || ||| |||||||||||| |||| |||  || ||||| |||||||| | | ||||||| ||||||| |    
T  21067422 cacaattaagcgtgcttgacttggagtagtctttggaggggtgacctaccggaaagtttctcggtaagcgtgcgagtggggacaaaacacactgaaaaga 21067521  T
Q  124 ttcatgttggtttgtggggtcagtcgacaatactaaaagtcatctggga 172  Q
     || |||| |||||| ||||||||| ||||| || |||||| |||||||    
T  21067522 ctcgtgttagtttgttgggtcagtccacaatgcttaaagtcgtctggga 21067570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 27578296 - 27578240
Alignment:
Q  14 ataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacct 70  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||| |||||||    
T  27578296 ataagaacttcacagttaagcgtgcttgacttggagcagttttgggatgagtgacct 27578240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 72
Target Start/End: Complemental strand, 21220346 - 21220283
Alignment:
Q  9 attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctac 72  Q
    |||| ||||||||| |||||||||||||  |||||||||||||||||||||| |||||||||||    
T  21220346 attctataagaactacacagttaagcgtgtttgacttggagcaattttgggacgggtgacctac 21220283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 149
Target Start/End: Complemental strand, 14571700 - 14571563
Alignment:
Q  12 ccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaac 111  Q
    ||||||||||| ||||||||||||| |||||||||||||||||| | ||||||||| ||    | || |||  ||  |||  || ||||||| | |||||    
T  14571700 ccataagaactccacagttaagcgtgcttgacttggagcaatttcgagatgggtgatcttttgggaagtttctcggaaagtgtgtgagtgaggacaaaac 14571601  T
Q  112 acgctgaaaaaattcatgttggtttgtggggtcagtcg 149  Q
    ||| |||||| | || ||||||||||||||||||||||    
T  14571600 acgttgaaaagactcgtgttggtttgtggggtcagtcg 14571563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 17028998 - 17029055
Alignment:
Q  8 tattccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggt 65  Q
    |||||||||||||||||| ||||||| || |||||||||||||||||| |||||||||    
T  17028998 tattccataagaacttcatagttaagagtgcttgacttggagcaatttcgggatgggt 17029055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 59 - 154
Target Start/End: Complemental strand, 15268138 - 15268043
Alignment:
Q  59 gatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    ||||||||| ||||| | ||||||  || ||||  |||||||||| | ||||||||||||||| | || |||||||||||||||||||||| ||||    
T  15268138 gatgggtgagctaccgggaaatttctcggtaagtgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaat 15268043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 15306115 - 15306052
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgg 63  Q
    |||||||| |||||||||||||| ||||||||||||| |||||||| ||||||| |||||||||    
T  15306115 cggtagctcattccataagaactccacagttaagcgtgcttgactttgagcaatcttgggatgg 15306052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 11 - 70
Target Start/End: Complemental strand, 27578922 - 27578863
Alignment:
Q  11 tccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacct 70  Q
    |||||||||||| ||||||||||||| ||| ||||||||| ||||||||||| |||||||    
T  27578922 tccataagaactacacagttaagcgtgcttaacttggagcgattttgggatgcgtgacct 27578863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 147
Target Start/End: Complemental strand, 8467815 - 8467690
Alignment:
Q  17 agaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgct 116  Q
    |||||| ||||||||||||| ||||||||||||||||||||||     ||||||    | || |||  ||  ||||||||||||||| | |||||||| |    
T  8467815 agaactccacagttaagcgtgcttgacttggagcaattttggg-----tgaccttatgggaagtttctcggaaagcatgcgagtgaggacaaaacacgtt 8467721  T
Q  117 gaaaaaattcatgttggtttgtggggtcagt 147  Q
    ||||| | || ||||||||||||||||||||    
T  8467720 gaaaagactcgtgttggtttgtggggtcagt 8467690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 70
Target Start/End: Original strand, 17029454 - 17029516
Alignment:
Q  8 tattccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacct 70  Q
    ||||||||||||||| |||||||||| || ||| |||||||||| ||||||| ||||||||||    
T  17029454 tattccataagaactccacagttaagagtgcttaacttggagcatttttgggttgggtgacct 17029516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 50399017 - 50398864
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| |||||||||||||| |||||||||||||  ||||||||||| | | ||  ||||||||||||||| |  || || ||| ||| | ||| ||    
T  50399017 cggtagctcattccataagaactccacagttaagcgtgtttgacttggagtattcttatgatgggtgacctaccggggaa-ttcccggtaaacgtgcaag 50398919  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    |||| | |||||||| || ||| | || ||||||||||| |||||||||| ||||    
T  50398918 tgaggacaaaacacgttggaaagactcgtgttggtttgtagggtcagtcggcaat 50398864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 156
Target Start/End: Complemental strand, 52048603 - 52048545
Alignment:
Q  98 agtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatac 156  Q
    |||||| | ||||||||||||||| ||||||||||||||||| | ||||||||||||||    
T  52048603 agtgaggacaaaacacgctgaaaagattcatgttggtttgtgagatcagtcgacaatac 52048545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 97 - 162
Target Start/End: Original strand, 5810047 - 5810112
Alignment:
Q  97 gagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaag 162  Q
    ||||||| ||||||||||||||||| | |||||||| |||||||||| ||||| |||| |||||||    
T  5810047 gagtgaggataaaacacgctgaaaagactcatgttgatttgtggggttagtcggcaatcctaaaag 5810112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 7 - 148
Target Start/End: Original strand, 14351918 - 14352059
Alignment:
Q  7 ctattccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaat 106  Q
    |||||||||||||||| |||||||||||||  ||||||| ||| | | || |||||| ||||||||   ||| ||||||  ||||| ||| |||||  |     
T  14351918 ctattccataagaactccacagttaagcgtgtttgacttcgagtagtctttggatggatgacctactgcaaagttttccagtaagcgtgcaagtgaagac 14352017  T
Q  107 aaaacacgctgaaaaaattcatgttggtttgtggggtcagtc 148  Q
    |||| | |||||||| | ||||||||||||||  ||||||||    
T  14352018 aaaatatgctgaaaagactcatgttggtttgtatggtcagtc 14352059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 13 - 135
Target Start/End: Complemental strand, 20306175 - 20306051
Alignment:
Q  13 cataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctac--cagaaaattttccgataagcatgcgagtgagaataaaa 110  Q
    |||||||||| ||| ||||||||| |||||||||||||||||||  |||||||| |||||   || || ||| |||| || | ||| |||||| | ||||    
T  20306175 cataagaactacacggttaagcgtgcttgacttggagcaatttttagatgggtgccctactataggaagtttcccgaaaaacgtgcaagtgaggacaaaa 20306076  T
Q  111 cacgctgaaaaaattcatgttggtt 135  Q
    ||| ||||||| || ||||||||||    
T  20306075 cactctgaaaagatccatgttggtt 20306051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 164
Target Start/End: Original strand, 7381463 - 7381547
Alignment:
Q  80 ttttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtc 164  Q
    ||||||| ||||| |||||||||| | ||||||||||||||| |  | ||||||||||| |||||||||| |||| || ||||||    
T  7381463 ttttccggtaagcgtgcgagtgaggacaaaacacgctgaaaagacccgtgttggtttgtagggtcagtcggcaatgcttaaagtc 7381547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 154
Target Start/End: Complemental strand, 14572163 - 14572024
Alignment:
Q  12 ccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaac 111  Q
    ||||||||||| ||||   |||||| |||||||| ||||||||||| |||||||||||| |  | || |||  ||  |||| || ||||||| | |||||    
T  14572163 ccataagaactccaca---aagcgtgcttgacttagagcaattttgagatgggtgaccttctgggaagtttctcggaaagcgtgtgagtgaggacaaaac 14572067  T
Q  112 acgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    ||| |||||| | || |||||||||| ||||||||||| ||||    
T  14572066 acggtgaaaagactcgtgttggtttgcggggtcagtcggcaat 14572024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 8 - 67
Target Start/End: Complemental strand, 23091527 - 23091468
Alignment:
Q  8 tattccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtga 67  Q
    ||||| |||| |||| ||||||||||| | ||||||||| ||||||||||||||||||||    
T  23091527 tattctataaaaactccacagttaagcatgcttgacttgtagcaattttgggatgggtga 23091468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 17628639 - 17628697
Alignment:
Q  12 ccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacct 70  Q
    ||||||||| | ||||||| ||||| | |||||||||||||||||| ||||||||||||    
T  17628639 ccataagaattccacagttgagcgtgcctgacttggagcaattttgagatgggtgacct 17628697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 168
Target Start/End: Complemental strand, 23976135 - 23976074
Alignment:
Q  107 aaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtcatct 168  Q
    ||||||||||||||| | | |||||||||| ||||||||||| ||||| |||||| ||||||    
T  23976135 aaaacacgctgaaaagactaatgttggtttatggggtcagtcaacaattctaaaaatcatct 23976074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 38 - 70
Target Start/End: Complemental strand, 26200279 - 26200247
Alignment:
Q  38 cttgacttggagcaattttgggatgggtgacct 70  Q
    |||||||||||||||||||||||||||||||||    
T  26200279 cttgacttggagcaattttgggatgggtgacct 26200247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 29628683 - 29628619
Alignment:
Q  9 attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctacc 73  Q
    |||||||||||||| |||||||||||||  ||||||||||| | | || ||||||||||| ||||    
T  29628683 attccataagaactccacagttaagcgtgtttgacttggagtagtctttggatgggtgacttacc 29628619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 94 - 154
Target Start/End: Original strand, 35477870 - 35477930
Alignment:
Q  94 tgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    |||||| ||| | ||||||||||||||| | || |||||||||||||||||||||| ||||    
T  35477870 tgcgagagaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaat 35477930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 170
Target Start/End: Original strand, 24194612 - 24194675
Alignment:
Q  107 aaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtcatctgg 170  Q
    |||| ||||||||||||||| ||||  |||||||||| ||| | ||||||| ||||||||||||    
T  24194612 aaaatacgctgaaaaaattcgtgttaatttgtggggttagttgccaatactgaaagtcatctgg 24194675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 16 - 70
Target Start/End: Original strand, 4185847 - 4185901
Alignment:
Q  16 aagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacct 70  Q
    |||||||  |||||||||  | |||||||||||||||||||||||| ||||||||    
T  4185847 aagaactctacagttaagtatgcttgacttggagcaattttgggataggtgacct 4185901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 31817863 - 31817806
Alignment:
Q  13 cataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacct 70  Q
    ||||||||||||| |||||||||| ||||||||| || | |||| ||||||| |||||    
T  31817863 cataagaacttcatagttaagcgtgcttgacttgtagtagttttaggatgggcgacct 31817806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 169
Target Start/End: Complemental strand, 53854859 - 53854702
Alignment:
Q  12 ccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaac 111  Q
    ||||||||||| || |||||||| |  | |||||| || | |||| ||||| ||||||||||| ||| ||| ||| ||| | |||||||||  | ||||     
T  53854859 ccataagaactccatagttaagcatgttagacttgaagtagtttttggatgtgtgacctaccaaaaagtttaccggtaaacgtgcgagtgatgacaaaat 53854760  T
Q  112 acgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtcatctg 169  Q
    ||| |||||| | || ||||| ||||| |||| ||||| |||| || |||||| ||||    
T  53854759 acgttgaaaagactcgtgttgatttgtagggttagtcggcaatgcttaaagtcgtctg 53854702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 88 - 164
Target Start/End: Complemental strand, 4414323 - 4414247
Alignment:
Q  88 taagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtc 164  Q
    ||||| ||||||| || | ||||||| ||||||| | || ||||||||||| |||||||||| |||| || ||||||    
T  4414323 taagcgtgcgagtcaggacaaaacacactgaaaagactcgtgttggtttgtagggtcagtcggcaatgcttaaagtc 4414247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 53996130 - 53996090
Alignment:
Q  9 attccataagaacttcacagttaagcgtacttgacttggag 49  Q
    |||||||||||||| |||||||||| || ||||||||||||    
T  53996130 attccataagaactccacagttaagtgtgcttgacttggag 53996090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 82; Significance: 2e-38; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 107493 - 107344
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| |||| | || ||| ||| ||||| ||||||    
T  107493 cggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacgtaccgggaagtttcccggtaagcgtgcgag 107394  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcg 149  Q
    |||| | |||||| |||||||| | || ||||||||||||||||||||||    
T  107393 tgaggacaaaacatgctgaaaagactcgtgttggtttgtggggtcagtcg 107344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 81; Significance: 9e-38; HSPs: 3)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 5137 - 5308
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| ||| |||||||||| ||||||||||||| ||| |||||||||||||| ||||||||||||||||| | |||||| ||| ||||  ||||||    
T  5137 cggtagctcatttcataagaactccacagttaagcgtgcttaacttggagcaattt-gggatgggtgacctacctggaaatttcccggtaagtgtgcgag 5235  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtcatctggga 172  Q
    |||| | ||||||||||||||| | || ||||||||||| ||||||||||||||| || |||||| |||||||    
T  5236 tgaggacaaaacacgctgaaaagactcgtgttggtttgtagggtcagtcgacaatgcttaaagtcgtctggga 5308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 14 - 164
Target Start/End: Original strand, 4691 - 4840
Alignment:
Q  14 ataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacac 113  Q
    ||||||||| |||||||||| || ||| |||||||||||||| ||||||||||||||||| | || ||| ||| ||||  |||||||||| | |||||||    
T  4691 ataagaactccacagttaagtgtgcttaacttggagcaattt-gggatgggtgacctaccgggaagtttcccggtaagtgtgcgagtgaggacaaaacac 4789  T
Q  114 gctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtc 164  Q
    |||||||| | || ||||||||||| ||||||||||||||| || ||||||    
T  4790 gctgaaaagactcgtgttggtttgtagggtcagtcgacaatgcttaaagtc 4840  T

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Target: scaffold0333; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 164
Target Start/End: Original strand, 5346 - 5403
Alignment:
Q  107 aaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtc 164  Q
    ||||||||||||||| | || ||||||||||| |||| |||||||||| || ||||||    
T  5346 aaaacacgctgaaaagactcgtgttggtttgtagggtaagtcgacaatgcttaaagtc 5403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 79; Significance: 1e-36; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 2858 - 3012
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||| | || ||| ||| ||||  ||||||    
T  2858 cggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggagacctaccgggaagtttcccggtaagtgtgcgag 2957  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    |||| | ||||||||||||||| | || ||||| |||||||||||||||| ||||    
T  2958 tgaggacaaaacacgctgaaaagactcgtgttgatttgtggggtcagtcggcaat 3012  T

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Target: scaffold0002 (Bit Score: 78; Significance: 5e-36; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 9 - 154
Target Start/End: Original strand, 154882 - 155027
Alignment:
Q  9 attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataa 108  Q
    |||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||| | || |||  || ||||  ||| |||||| | ||    
T  154882 attccataagaactccacagttaagcgtgcttgacttggagcaattttggaatgggtgacctaccgggaagtttctcggtaagtgtgctagtgaggacaa 154981  T
Q  109 aacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    ||||||||||||| | || |||||||||||||||||||||||||||    
T  154982 aacacgctgaaaagactcgtgttggtttgtggggtcagtcgacaat 155027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 154
Target Start/End: Original strand, 154512 - 154572
Alignment:
Q  94 tgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    |||||||||| | ||||||||||||||| | || ||||| |||||||||||||||||||||    
T  154512 tgcgagtgaggacaaaacacgctgaaaagactcgtgttgatttgtggggtcagtcgacaat 154572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 76; Significance: 8e-35; HSPs: 3)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 162708 - 162553
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| |||||||||||||| | ||||||||||| ||||||||||||||| ||||||||| |||||||||| | || |||  |||||||| ||||||    
T  162708 cggtagctcattccataagaactccgcagttaagcgtgcttgacttggagcaactttgggatgagtgacctacctggaagtttcgcgataagcgtgcgag 162609  T
Q  100 tgagaataaaacacgctgaaaaa-attcatgttggtttgtggggtcagtcgacaat 154  Q
    |||| | |||||||||||||||| | || |||||||||||||||||||||| ||||    
T  162608 tgaggacaaaacacgctgaaaaagactcgtgttggtttgtggggtcagtcggcaat 162553  T

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Target: scaffold0022; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 163164 - 163010
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| | | || |||  || ||||| | ||||    
T  163164 cggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctatcgggaagtttctcggtaagcgttcgag 163065  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    |||| | ||||||||||||||| | || ||||||||||||||| |||||| ||||    
T  163064 tgaggacaaaacacgctgaaaagactcgtgttggtttgtggggccagtcggcaat 163010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 15 - 172
Target Start/End: Original strand, 163202 - 163359
Alignment:
Q  15 taagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccga-taagcatgcgagtgagaataaaacac 113  Q
    |||||| | ||||||||||||| |||||||||||||||||||||||||||||||||||| || || ||||| | ||||| |||||||||| | |||||||    
T  163202 taagaattccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctacc-gagaagtttcccagtaagcgtgcgagtgaggacaaaacac 163300  T
Q  114 gctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtcatctggga 172  Q
    |||||||| | || ||||||||||| ||||| ||||||||| || |||||| |||||||    
T  163301 gctgaaaagactcgtgttggtttgtagggtctgtcgacaatcctgaaagtcgtctggga 163359  T

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Target: scaffold0389 (Bit Score: 75; Significance: 3e-34; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 13563 - 13409
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgag 99  Q
    |||||||| |||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||||||||||| | || |||     ||||| ||||||    
T  13563 cggtagctcattccataagaactccacagttaagcgtgcttgactttgagcaattttgggatgggtgacctaccgggaagtttctttgtaagcgtgcgag 13464  T
Q  100 tgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    |||| | ||||||||||||||| | || |||||||||||||||||||||| ||||    
T  13463 tgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaat 13409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 74; Significance: 1e-33; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 25 - 150
Target Start/End: Complemental strand, 1706 - 1581
Alignment:
Q  25 acagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaat 124  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| | || ||| ||| |||||||| ||||||| | |||||||||| |||| |     
T  1706 acagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagcatgtgagtgaggacaaaacacgctaaaaagac 1607  T
Q  125 tcatgttggtttgtggggtcagtcga 150  Q
    || |||||||||||||||||||||||    
T  1606 tcgtgttggtttgtggggtcagtcga 1581  T

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Target: scaffold0024 (Bit Score: 72; Significance: 2e-32; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 105836 - 105990
Alignment:
Q  1 cggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttcc-gataagcatgcga 98  Q
    |||||||| |||||||||||||| ||||||||||||| ||||||||||||||||||||||||| |||||||||| || || ||||| | ||||| |||||    
T  105836 cggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgtgtgacctacc-gagaagtttcctggtaagcgtgcga 105934  T
Q  99 gtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    ||||| | ||||||||||||||| | || ||||||||| | |||||||||| ||||    
T  105935 gtgaggacaaaacacgctgaaaagactcgtgttggtttatagggtcagtcggcaat 105990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 62; Significance: 2e-26; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 13 - 170
Target Start/End: Complemental strand, 17615 - 17458
Alignment:
Q  13 cataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaaca 112  Q
    |||||||||| ||||||||||||| |||||||||||| | | || |||||||||||||||  |||| |||| || ||||| |||||||||| | ||||||    
T  17615 cataagaactccacagttaagcgtgcttgacttggagtactctttggatgggtgacctactcgaaagtttttcggtaagcgtgcgagtgaggacaaaaca 17516  T
Q  113 cgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtcatctgg 170  Q
    ||||||||| | || ||||||||  | |||||||||| ||||||| ||| || |||||    
T  17515 cgctgaaaagactcgtgttggttcatagggtcagtcggcaatacttaaaatcgtctgg 17458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 9 - 170
Target Start/End: Complemental strand, 18156 - 17995
Alignment:
Q  9 attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataa 108  Q
    |||||||||||||| ||||||||||||| |||||||||||| | | || ||||||||||||||   |||| |||| || ||| | |||||||||| | |     
T  18156 attccataagaactccacagttaagcgtgcttgacttggagtagtctttggatgggtgacctattggaaagtttttcggtaaacgtgcgagtgaggacac 18057  T
Q  109 aacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtcatctgg 170  Q
    ||||||||||||| | || ||||| ||||| |||||| |||||||| || |||||| |||||    
T  18056 aacacgctgaaaagactcgtgttgatttgtagggtcaatcgacaatgcttaaagtcgtctgg 17995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 7070 - 7128
Alignment:
Q  12 ccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacct 70  Q
    ||||||||||| ||||||||||| | ||||||||||||||||||||| |||||||||||    
T  7070 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgggtgacct 7128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 149
Target Start/End: Original strand, 245676 - 245813
Alignment:
Q  12 ccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaac 111  Q
    ||||||||||| ||||||||||||| |||||||||||||||||| | ||||||||| ||    | || |||  ||  |||  || ||||||| | |||||    
T  245676 ccataagaactccacagttaagcgtgcttgacttggagcaatttcgagatgggtgatcttttgggaagtttctcggaaagtgtgtgagtgaggacaaaac 245775  T
Q  112 acgctgaaaaaattcatgttggtttgtggggtcagtcg 149  Q
    ||| |||||| | || ||||||||||||||||||||||    
T  245776 acgttgaaaagactcgtgttggtttgtggggtcagtcg 245813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 154
Target Start/End: Original strand, 245213 - 245352
Alignment:
Q  12 ccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaac 111  Q
    ||||||||||| ||||   |||||| |||||||| ||||||||||| |||||||||||| |  | || |||  ||  |||| || ||||||| | |||||    
T  245213 ccataagaactccaca---aagcgtgcttgacttagagcaattttgagatgggtgaccttctgggaagtttctcggaaagcgtgtgagtgaggacaaaac 245309  T
Q  112 acgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 154  Q
    ||| |||||| | || |||||||||| ||||||||||| ||||    
T  245310 acggtgaaaagactcgtgttggtttgcggggtcagtcggcaat 245352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0557 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0557
Description:

Target: scaffold0557; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 88 - 162
Target Start/End: Original strand, 2300 - 2374
Alignment:
Q  88 taagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaag 162  Q
    ||||| |||||||||| | ||||||||||||||| | || ||||||||||| || |||||||||||| |||||||    
T  2300 taagcgtgcgagtgaggagaaaacacgctgaaaagactcgtgttggtttgtaggatcagtcgacaatcctaaaag 2374  T

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Target: scaffold0071 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 44739 - 44681
Alignment:
Q  12 ccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacct 70  Q
    |||| |||||| || ||||||  || ||||||||||| |||||||||||||||||||||    
T  44739 ccattagaactccaaagttaaatgtgcttgacttggatcaattttgggatgggtgacct 44681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 107 - 163
Target Start/End: Complemental strand, 63030 - 62974
Alignment:
Q  107 aaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagt 163  Q
    ||||||||||||||| | || | |||||||||||||||||||| |||| || |||||    
T  63030 aaaacacgctgaaaagactcgtattggtttgtggggtcagtcggcaatcctgaaagt 62974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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