View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5232_low_14 (Length: 296)

Name: NF5232_low_14
Description: NF5232
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5232_low_14
NF5232_low_14
[»] chr5 (49 HSPs)
chr5 (18-239)||(2474461-2474683)
chr5 (18-241)||(17445321-17445545)
chr5 (18-231)||(34372124-34372338)
chr5 (18-231)||(34371668-34371882)
chr5 (18-225)||(189124-189332)
chr5 (18-249)||(22556592-22556825)
chr5 (18-249)||(22557025-22557258)
chr5 (18-239)||(2474015-2474227)
chr5 (17-231)||(3886477-3886692)
chr5 (18-231)||(8641911-8642124)
chr5 (22-231)||(42788522-42788732)
chr5 (18-231)||(3886933-3887147)
chr5 (18-227)||(8391202-8391411)
chr5 (18-231)||(2193872-2194074)
chr5 (18-249)||(1821962-1822194)
chr5 (18-180)||(21886073-21886236)
chr5 (18-231)||(10927279-10927493)
chr5 (18-241)||(18750062-18750286)
chr5 (26-231)||(15512888-15513093)
chr5 (18-243)||(24182110-24182335)
chr5 (18-226)||(27646716-27646925)
chr5 (18-150)||(34867846-34867979)
chr5 (18-215)||(20039367-20039564)
chr5 (18-231)||(20858418-20858631)
chr5 (18-150)||(10926903-10927036)
chr5 (42-239)||(11757149-11757347)
chr5 (42-247)||(29679967-29680173)
chr5 (35-147)||(18304504-18304617)
chr5 (18-147)||(30684516-30684646)
chr5 (18-145)||(30719767-30719895)
chr5 (18-126)||(39146995-39147104)
chr5 (91-231)||(30720136-30720276)
chr5 (18-140)||(42429201-42429324)
chr5 (18-145)||(16370673-16370798)
chr5 (32-108)||(4657992-4658069)
chr5 (91-231)||(30684887-30685027)
chr5 (22-133)||(32574632-32574744)
chr5 (44-246)||(1880159-1880361)
chr5 (18-112)||(4673466-4673561)
chr5 (89-147)||(4102924-4102982)
chr5 (27-126)||(5066872-5066972)
chr5 (18-68)||(2058696-2058746)
chr5 (18-76)||(11160713-11160771)
chr5 (184-231)||(21883961-21884008)
chr5 (39-72)||(39801498-39801531)
chr5 (135-249)||(38063687-38063800)
chr5 (27-77)||(43356651-43356701)
chr5 (157-213)||(187754-187810)
chr5 (115-147)||(2058618-2058650)
[»] scaffold0499 (1 HSPs)
scaffold0499 (18-241)||(1917-2141)
[»] chr2 (45 HSPs)
chr2 (19-239)||(5399685-5399906)
chr2 (18-231)||(25337873-25338087)
chr2 (18-249)||(33771057-33771289)
chr2 (19-240)||(24818383-24818604)
chr2 (18-231)||(30966290-30966504)
chr2 (18-211)||(8256582-8256776)
chr2 (18-231)||(30966746-30966960)
chr2 (165-296)||(11389687-11389818)
chr2 (165-296)||(11406348-11406479)
chr2 (18-223)||(29259504-29259710)
chr2 (18-193)||(41754345-41754521)
chr2 (18-149)||(11394591-11394721)
chr2 (18-149)||(11388244-11388375)
chr2 (18-240)||(16378993-16379216)
chr2 (18-240)||(16379449-16379672)
chr2 (68-239)||(32377584-32377756)
chr2 (18-231)||(33175014-33175226)
chr2 (18-249)||(25433914-25434146)
chr2 (18-149)||(29804738-29804870)
chr2 (32-249)||(1912595-1912812)
chr2 (18-249)||(1707097-1707329)
chr2 (18-241)||(33174559-33174782)
chr2 (18-231)||(30963139-30963353)
chr2 (93-231)||(32377783-32377921)
chr2 (34-249)||(15639806-15640022)
chr2 (18-248)||(8073948-8074179)
chr2 (19-147)||(30961843-30961972)
chr2 (26-212)||(15619962-15620149)
chr2 (26-111)||(18098874-18098960)
chr2 (26-150)||(38898869-38898994)
chr2 (18-226)||(30963601-30963810)
chr2 (19-249)||(13191031-13191262)
chr2 (26-147)||(83081-83203)
chr2 (18-215)||(27882818-27883016)
chr2 (18-147)||(1953211-1953341)
chr2 (18-109)||(20502079-20502170)
chr2 (18-139)||(16542041-16542164)
chr2 (18-77)||(36924453-36924514)
chr2 (135-249)||(8181219-8181333)
chr2 (18-65)||(8181394-8181441)
chr2 (27-229)||(37552632-37552833)
chr2 (18-72)||(18447954-18448008)
chr2 (19-73)||(26864851-26864905)
chr2 (185-231)||(29804871-29804917)
chr2 (171-231)||(20502174-20502234)
[»] chr7 (53 HSPs)
chr7 (18-231)||(42515600-42515814)
chr7 (18-240)||(34405458-34405681)
chr7 (18-231)||(2941633-2941847)
chr7 (19-231)||(9125016-9125229)
chr7 (18-249)||(2465980-2466211)
chr7 (18-231)||(28495910-28496124)
chr7 (18-231)||(36422308-36422521)
chr7 (18-231)||(13125011-13125226)
chr7 (18-180)||(2465789-2465952)
chr7 (18-231)||(2193312-2193526)
chr7 (18-249)||(6718933-6719164)
chr7 (61-249)||(7646514-7646703)
chr7 (18-246)||(42515148-42515377)
chr7 (22-231)||(2189204-2189414)
chr7 (58-231)||(7646354-7646528)
chr7 (21-231)||(18833345-18833556)
chr7 (46-231)||(13122380-13122567)
chr7 (18-249)||(679873-680104)
chr7 (18-231)||(28495495-28495698)
chr7 (18-241)||(22529101-22529325)
chr7 (24-249)||(29038878-29039104)
chr7 (23-154)||(46425802-46425934)
chr7 (18-241)||(2611525-2611742)
chr7 (18-197)||(35474031-35474211)
chr7 (18-122)||(6747583-6747688)
chr7 (18-115)||(11517381-11517479)
chr7 (18-239)||(25182417-25182639)
chr7 (18-216)||(5406478-5406678)
chr7 (22-149)||(35527079-35527207)
chr7 (76-219)||(43776178-43776322)
chr7 (35-147)||(1628786-1628899)
chr7 (90-247)||(3305208-3305365)
chr7 (18-222)||(29357341-29357546)
chr7 (18-145)||(20966107-20966235)
chr7 (18-109)||(36015409-36015501)
chr7 (18-109)||(26421303-26421395)
chr7 (18-113)||(26421754-26421850)
chr7 (27-145)||(9623273-9623391)
chr7 (18-146)||(11372507-11372636)
chr7 (33-113)||(31406578-31406659)
chr7 (18-97)||(31743834-31743914)
chr7 (19-83)||(43233470-43233534)
chr7 (22-113)||(16192379-16192471)
chr7 (171-249)||(36422592-36422670)
chr7 (157-231)||(43233153-43233227)
chr7 (22-62)||(26957603-26957643)
chr7 (171-246)||(6747937-6748012)
chr7 (34-113)||(7461345-7461424)
chr7 (35-133)||(37672233-37672332)
chr7 (22-139)||(6585668-6585787)
chr7 (169-249)||(26419093-26419173)
chr7 (171-231)||(7461258-7461318)
chr7 (203-239)||(33316943-33316979)
[»] chr1 (52 HSPs)
chr1 (18-231)||(20054412-20054626)
chr1 (18-231)||(20054868-20055082)
chr1 (18-231)||(20055324-20055538)
chr1 (18-231)||(20055780-20055994)
chr1 (18-231)||(20056236-20056450)
chr1 (18-231)||(20057139-20057353)
chr1 (18-231)||(20053956-20054170)
chr1 (22-231)||(20057595-20057805)
chr1 (18-231)||(20056692-20056906)
chr1 (18-231)||(20845537-20845751)
chr1 (18-231)||(16451809-16452023)
chr1 (18-231)||(16460962-16461176)
chr1 (18-231)||(38340962-38341176)
chr1 (18-231)||(52250262-52250476)
chr1 (18-231)||(20060216-20060430)
chr1 (18-231)||(46693611-46693825)
chr1 (18-241)||(50002573-50002797)
chr1 (18-231)||(35759484-35759698)
chr1 (35-225)||(50002957-50003148)
chr1 (18-231)||(51372750-51372964)
chr1 (18-231)||(43056941-43057155)
chr1 (60-231)||(52250641-52250813)
chr1 (60-231)||(52250978-52251150)
chr1 (18-146)||(50002246-50002375)
chr1 (18-215)||(43057415-43057613)
chr1 (18-148)||(35760873-35761004)
chr1 (18-110)||(20061188-20061281)
chr1 (22-147)||(16907294-16907420)
chr1 (18-226)||(23180786-23180995)
chr1 (18-149)||(31822621-31822753)
chr1 (19-225)||(2634523-2634730)
chr1 (32-146)||(2634994-2635109)
chr1 (18-126)||(12728047-12728157)
chr1 (18-109)||(2328371-2328463)
chr1 (18-149)||(12883580-12883712)
chr1 (18-230)||(30872824-30873040)
chr1 (19-150)||(7548148-7548280)
chr1 (44-231)||(7229819-7230007)
chr1 (18-139)||(16410691-16410813)
chr1 (18-139)||(16440547-16440669)
chr1 (114-231)||(7547790-7547907)
chr1 (18-125)||(10820648-10820758)
chr1 (27-147)||(2739587-2739708)
chr1 (86-249)||(35009866-35010017)
chr1 (32-94)||(31823097-31823160)
chr1 (101-147)||(8278097-8278143)
chr1 (133-225)||(31823001-31823093)
chr1 (174-239)||(49996548-49996613)
chr1 (171-231)||(35759940-35760000)
chr1 (32-69)||(46411173-46411210)
chr1 (32-135)||(842905-843009)
chr1 (37-125)||(42317730-42317818)
[»] scaffold0040 (1 HSPs)
scaffold0040 (18-249)||(2068-2300)
[»] scaffold0243 (1 HSPs)
scaffold0243 (18-231)||(1276-1490)
[»] chr8 (46 HSPs)
chr8 (18-249)||(10844473-10844705)
chr8 (18-249)||(17103137-17103370)
chr8 (18-231)||(22548871-22549085)
chr8 (18-231)||(12827130-12827344)
chr8 (18-231)||(22548425-22548639)
chr8 (18-239)||(25148023-25148244)
chr8 (18-231)||(25147592-25147805)
chr8 (22-239)||(27022207-27022424)
chr8 (18-231)||(34308355-34308569)
chr8 (26-241)||(12100755-12100970)
chr8 (18-249)||(27925955-27926186)
chr8 (22-231)||(22026439-22026650)
chr8 (18-225)||(34308817-34309029)
chr8 (18-231)||(41658981-41659195)
chr8 (26-239)||(21315978-21316191)
chr8 (18-247)||(8080202-8080432)
chr8 (40-249)||(31283510-31283719)
chr8 (18-146)||(25144828-25144957)
chr8 (18-225)||(2044114-2044322)
chr8 (18-215)||(32292453-32292651)
chr8 (18-215)||(33852150-33852348)
chr8 (22-231)||(41913030-41913240)
chr8 (18-145)||(6464872-6465000)
chr8 (18-121)||(10844939-10845043)
chr8 (27-241)||(30527348-30527563)
chr8 (35-231)||(6466783-6466976)
chr8 (18-247)||(15818876-15819105)
chr8 (18-119)||(28375042-28375144)
chr8 (27-239)||(28453403-28453616)
chr8 (18-222)||(3745157-3745362)
chr8 (18-147)||(27819206-27819336)
chr8 (18-83)||(27021904-27021969)
chr8 (22-106)||(22840530-22840615)
chr8 (18-147)||(15567516-15567646)
chr8 (18-144)||(15567972-15568095)
chr8 (115-231)||(32292095-32292211)
chr8 (18-72)||(22705228-22705282)
chr8 (18-145)||(3744694-3744822)
chr8 (34-249)||(6466329-6466544)
chr8 (58-215)||(10729580-10729736)
chr8 (51-239)||(25307855-25308042)
chr8 (27-147)||(1297072-1297193)
chr8 (141-241)||(6463409-6463510)
chr8 (22-109)||(30334906-30334994)
chr8 (169-231)||(9251093-9251155)
chr8 (18-73)||(17429556-17429611)
[»] chr6 (54 HSPs)
chr6 (18-231)||(20850377-20850591)
chr6 (18-231)||(13191389-13191603)
chr6 (18-231)||(17027407-17027621)
chr6 (18-231)||(7911934-7912148)
chr6 (23-231)||(13492393-13492603)
chr6 (37-231)||(9352137-9352332)
chr6 (18-223)||(20896571-20896778)
chr6 (18-225)||(13492845-13493054)
chr6 (34-249)||(7912382-7912598)
chr6 (18-231)||(23776497-23776710)
chr6 (18-231)||(23986193-23986407)
chr6 (19-231)||(17730985-17731202)
chr6 (18-147)||(16520024-16520154)
chr6 (18-238)||(11062341-11062562)
chr6 (61-231)||(28780209-28780380)
chr6 (18-249)||(20126040-20126272)
chr6 (18-231)||(2890715-2890929)
chr6 (22-147)||(15929642-15929768)
chr6 (22-242)||(1991613-1991834)
chr6 (26-147)||(9440269-9440391)
chr6 (22-142)||(2681181-2681302)
chr6 (18-249)||(21311571-21311803)
chr6 (18-249)||(21312027-21312259)
chr6 (18-231)||(2720439-2720654)
chr6 (18-231)||(9440733-9440947)
chr6 (18-122)||(6330897-6331002)
chr6 (18-231)||(14771595-14771809)
chr6 (18-99)||(27334217-27334299)
chr6 (18-99)||(27394957-27395039)
chr6 (18-109)||(3652542-3652634)
chr6 (22-144)||(17851434-17851557)
chr6 (38-149)||(17850994-17851106)
chr6 (26-240)||(28065703-28065920)
chr6 (18-145)||(3885052-3885177)
chr6 (18-191)||(33774918-33775094)
chr6 (20-231)||(20735753-20735965)
chr6 (61-241)||(2891160-2891340)
chr6 (40-226)||(12194406-12194592)
chr6 (32-190)||(17205409-17205567)
chr6 (26-99)||(15929263-15929337)
chr6 (18-95)||(31821704-31821782)
chr6 (35-139)||(30729807-30729912)
chr6 (96-240)||(3652658-3652802)
chr6 (20-126)||(20732636-20732743)
chr6 (22-133)||(32292945-32293055)
chr6 (22-125)||(28583023-28583127)
chr6 (182-240)||(21729612-21729670)
chr6 (173-231)||(27334305-27334363)
chr6 (173-231)||(27395045-27395103)
chr6 (166-234)||(1664012-1664080)
chr6 (158-226)||(11062026-11062094)
chr6 (32-147)||(34660468-34660584)
chr6 (174-240)||(31415956-31416021)
chr6 (17-125)||(10964359-10964468)
[»] chr3 (57 HSPs)
chr3 (18-231)||(13150430-13150644)
chr3 (18-231)||(31284152-31284366)
chr3 (18-231)||(50347802-50348016)
chr3 (18-226)||(28561802-28562010)
chr3 (18-231)||(16811437-16811649)
chr3 (18-231)||(11179910-11180124)
chr3 (18-239)||(39653220-39653442)
chr3 (19-231)||(14820211-14820424)
chr3 (25-239)||(8067343-8067558)
chr3 (18-231)||(32227556-32227770)
chr3 (22-231)||(27187205-27187416)
chr3 (18-231)||(13149975-13150189)
chr3 (18-231)||(32227097-32227311)
chr3 (18-231)||(32386610-32386824)
chr3 (19-239)||(14814006-14814227)
chr3 (18-249)||(37045091-37045320)
chr3 (21-249)||(16810984-16811213)
chr3 (18-247)||(4067220-4067450)
chr3 (18-225)||(20884999-20885207)
chr3 (18-241)||(25230114-25230338)
chr3 (18-241)||(25237701-25237925)
chr3 (18-249)||(25238542-25238774)
chr3 (18-241)||(7493937-7494161)
chr3 (18-240)||(30529743-30529965)
chr3 (18-231)||(25230581-25230795)
chr3 (18-231)||(25238168-25238382)
chr3 (18-147)||(29224380-29224510)
chr3 (26-155)||(41472364-41472494)
chr3 (19-239)||(25248168-25248390)
chr3 (18-241)||(7477247-7477471)
chr3 (18-149)||(39640993-39641125)
chr3 (21-241)||(25802414-25802635)
chr3 (18-113)||(25239071-25239167)
chr3 (51-231)||(53150688-53150869)
chr3 (35-147)||(2911168-2911281)
chr3 (19-155)||(41474054-41474191)
chr3 (18-106)||(32796936-32797025)
chr3 (22-233)||(15405606-15405818)
chr3 (22-233)||(15392570-15392782)
chr3 (32-147)||(25802964-25803080)
chr3 (22-147)||(15411015-15411141)
chr3 (22-147)||(15417431-15417557)
chr3 (19-132)||(31103933-31104049)
chr3 (32-147)||(3899870-3899986)
chr3 (22-233)||(15388203-15388415)
chr3 (22-147)||(15377344-15377470)
chr3 (32-144)||(26309952-26310065)
chr3 (165-241)||(25238993-25239069)
chr3 (32-78)||(3890048-3890094)
chr3 (165-231)||(41473745-41473811)
chr3 (52-114)||(43736714-43736777)
chr3 (59-143)||(12762939-12763023)
chr3 (166-215)||(18318860-18318909)
chr3 (165-241)||(2911288-2911364)
chr3 (89-141)||(15381258-15381310)
chr3 (89-141)||(15396493-15396545)
chr3 (89-141)||(15410629-15410681)
[»] scaffold0322 (1 HSPs)
scaffold0322 (18-231)||(19022-19236)
[»] chr4 (69 HSPs)
chr4 (18-231)||(7678492-7678706)
chr4 (18-241)||(44471185-44471409)
chr4 (18-231)||(49998692-49998906)
chr4 (18-218)||(4127772-4127973)
chr4 (18-231)||(35871684-35871897)
chr4 (18-193)||(12691907-12692083)
chr4 (22-248)||(44470728-44470954)
chr4 (18-231)||(23350153-23350367)
chr4 (19-231)||(24629306-24629516)
chr4 (18-249)||(23943094-23943326)
chr4 (18-231)||(50398408-50398622)
chr4 (32-196)||(50814730-50814895)
chr4 (24-150)||(24628928-24629055)
chr4 (18-241)||(1645609-1645833)
chr4 (18-240)||(51331144-51331365)
chr4 (27-239)||(1464212-1464424)
chr4 (18-241)||(3169262-3169486)
chr4 (18-249)||(21067790-21068019)
chr4 (18-231)||(50398864-50399077)
chr4 (22-249)||(9423710-9423938)
chr4 (18-149)||(21220283-21220415)
chr4 (18-197)||(23942693-23942873)
chr4 (18-224)||(27026559-27026765)
chr4 (18-231)||(4127288-4127521)
chr4 (18-231)||(14572024-14572234)
chr4 (18-249)||(21067338-21067570)
chr4 (32-231)||(27578327-27578527)
chr4 (18-147)||(31817806-31817936)
chr4 (32-249)||(33764930-33765148)
chr4 (40-140)||(15306052-15306153)
chr4 (18-224)||(8467690-8467884)
chr4 (18-147)||(17628567-17628697)
chr4 (18-225)||(14351851-14352059)
chr4 (18-138)||(43928927-43929047)
chr4 (18-231)||(13266142-13266356)
chr4 (18-126)||(53996090-53996199)
chr4 (26-120)||(14571702-14571797)
chr4 (35-144)||(23091468-23091578)
chr4 (18-110)||(27029333-27029426)
chr4 (22-212)||(20306051-20306241)
chr4 (32-142)||(17028944-17029055)
chr4 (22-147)||(27578863-27578989)
chr4 (35-147)||(17029403-17029516)
chr4 (18-150)||(29628619-29628751)
chr4 (32-147)||(4185785-4185901)
chr4 (27-125)||(13613874-13613972)
chr4 (32-233)||(52048545-52048736)
chr4 (116-249)||(40607086-40607219)
chr4 (87-147)||(11828439-11828499)
chr4 (91-147)||(27578240-27578296)
chr4 (18-140)||(41869974-41870097)
chr4 (89-226)||(14571563-14571700)
chr4 (18-245)||(23976074-23976303)
chr4 (35-147)||(42838696-42838812)
chr4 (26-137)||(34554493-34554605)
chr4 (37-85)||(39902470-39902518)
chr4 (19-109)||(4186224-4186315)
chr4 (136-231)||(15268043-15268138)
chr4 (18-123)||(31817376-31817482)
chr4 (174-239)||(5810047-5810112)
chr4 (26-110)||(44831061-44831146)
chr4 (157-241)||(7381463-7381547)
chr4 (27-139)||(17629033-17629145)
chr4 (115-147)||(26200247-26200279)
chr4 (171-231)||(35477870-35477930)
chr4 (184-247)||(24194612-24194675)
chr4 (89-246)||(53854702-53854859)
chr4 (165-241)||(4414247-4414323)
chr4 (67-142)||(52299826-52299902)
[»] scaffold0018 (1 HSPs)
scaffold0018 (19-240)||(10357-10578)
[»] scaffold0020 (1 HSPs)
scaffold0020 (18-226)||(107344-107553)
[»] scaffold0168 (1 HSPs)
scaffold0168 (18-231)||(2798-3012)
[»] scaffold0024 (1 HSPs)
scaffold0024 (18-231)||(105776-105990)
[»] scaffold0022 (4 HSPs)
scaffold0022 (18-231)||(162553-162768)
scaffold0022 (58-249)||(163167-163359)
scaffold0022 (61-231)||(163010-163181)
scaffold0022 (18-147)||(69775-69905)
[»] scaffold0333 (3 HSPs)
scaffold0333 (32-249)||(5091-5308)
scaffold0333 (18-241)||(4617-4840)
scaffold0333 (184-241)||(5346-5403)
[»] scaffold0002 (2 HSPs)
scaffold0002 (18-231)||(154813-155027)
scaffold0002 (171-231)||(154512-154572)
[»] scaffold0389 (1 HSPs)
scaffold0389 (48-231)||(13409-13593)
[»] scaffold0047 (2 HSPs)
scaffold0047 (18-247)||(17458-17688)
scaffold0047 (18-247)||(17995-18224)
[»] scaffold0277 (1 HSPs)
scaffold0277 (61-231)||(14578-14749)
[»] scaffold0217 (1 HSPs)
scaffold0217 (73-240)||(421-589)
[»] scaffold0005 (3 HSPs)
scaffold0005 (18-231)||(245142-245352)
scaffold0005 (26-120)||(245579-245674)
scaffold0005 (89-226)||(245676-245813)
[»] scaffold0557 (1 HSPs)
scaffold0557 (18-239)||(2161-2374)
[»] scaffold1519 (1 HSPs)
scaffold1519 (102-227)||(1581-1706)
[»] scaffold0391 (1 HSPs)
scaffold0391 (18-126)||(14797-14906)
[»] scaffold0088 (1 HSPs)
scaffold0088 (18-74)||(23729-23785)
[»] scaffold0664 (1 HSPs)
scaffold0664 (18-84)||(4006-4072)
[»] scaffold0007 (1 HSPs)
scaffold0007 (18-77)||(142305-142364)
[»] scaffold0071 (1 HSPs)
scaffold0071 (22-147)||(44681-44807)
[»] scaffold0036 (1 HSPs)
scaffold0036 (35-215)||(26143-26322)
[»] scaffold0137 (1 HSPs)
scaffold0137 (89-147)||(7070-7128)
[»] scaffold0101 (1 HSPs)
scaffold0101 (18-73)||(45442-45497)
[»] scaffold0065 (1 HSPs)
scaffold0065 (184-240)||(62974-63030)


Alignment Details
Target: chr5 (Bit Score: 155; Significance: 3e-82; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 18 - 239
Target Start/End: Original strand, 2474461 - 2474683
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||    
T  2474461 gaaggaagacttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgct 2474560  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||||||||||||||| ||||||||||||||| |||| ||| ||| |||||||||||||||| | ||||||||||||||| | || ||||||||||||    
T  2474561 tgacttggagcaattttgagatgggtgacctaccggaaagtttcccggtaagcatgcgagtgaggaaaaaacacgctgaaaagactcgtgttggtttgtg 2474660  T
Q  217 gggtcagtcgacaatactaaaag 239  Q
    |||||||||| |||| |||||||    
T  2474661 gggtcagtcggcaatcctaaaag 2474683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 18 - 241
Target Start/End: Complemental strand, 17445545 - 17445321
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| | ||||||||||||| ||    
T  17445545 gaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttatcggtagctcattccataagaaatccacagttaagcgtgct 17445446  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||||||||||||||||||||||||||||||| | || ||| ||| ||||| |||||||||| | ||||||||||||||| | || ||||||||||||    
T  17445445 tgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtg 17445346  T
Q  217 gggtcagtcgacaatactaaaagtc 241  Q
    ||||||||||||||| |||||||||    
T  17445345 gggtcagtcgacaatcctaaaagtc 17445321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 18 - 231
Target Start/End: Original strand, 34372124 - 34372338
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||    
T  34372124 gaaggaatgcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaacttcacagttaagcgtgct 34372223  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||||||||||||||||||| ||||||||||| | || ||||||||||||| |||||||||| | ||||||||||||||| | || ||||||||| ||    
T  34372224 tgacttggagcaattttgggattggtgacctaccgggaagttttccgataagcgtgcgagtgaggaaaaaacacgctgaaaatactcgtgttggtttatg 34372323  T
Q  217 gggtcagtcgacaat 231  Q
    | |||||||| ||||    
T  34372324 gcgtcagtcggcaat 34372338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 18 - 231
Target Start/End: Original strand, 34371668 - 34371882
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||  ||||||||||||| ||    
T  34371668 gaaggaatgcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaacaccacagttaagcgtgct 34371767  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||||||||||||||||||||||||||||||  | || ||| ||| ||||| |||||||||| | |||||||| |||||| | || ||||||||||||    
T  34371768 tgacttggagcaattttgggatgggtgacctactgggaagtttcccggtaagcgtgcgagtgaggacaaaacacgttgaaaagactcgtgttggtttgtg 34371867  T
Q  217 gggtcagtcgacaat 231  Q
    |||||||||| ||||    
T  34371868 gggtcagtcggcaat 34371882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 18 - 225
Target Start/End: Original strand, 189124 - 189332
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| ||||||||||| | ||    
T  189124 gaaggaaggcttataagaattgtttggtactacctatatcaacaagatgtatcttcttttcggtagctcattccataagaactccacagttaagcatgct 189223  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||||||||||||||||||||||||||||||| |||| ||| ||| ||| | |||||||||| | ||||||||||||||| | || ||||||||||||    
T  189224 tgacttggagcaattttgggatgggtgacctaccggaaagtttcccggtaaacgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtg 189323  T
Q  217 gggtcagtc 225  Q
    || ||||||    
T  189324 ggatcagtc 189332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 18 - 249
Target Start/End: Original strand, 22556592 - 22556825
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||       
T  22556592 gaaggaaggcttatatgaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattctttaagaacttcacagttaagcgtggc 22556691  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctg-aaaaaattcatgttggtttgt 215  Q
    |||||||||||||||||||||||||||||||||||| || |||  || ||||| |||||||||| | ||||||||||| |||| | || |||||||||||    
T  22556692 tgacttggagcaattttgggatgggtgacctaccaggaagtttctcggtaagcgtgcgagtgaggacaaaacacgctgtaaaagactcgtgttggtttgt 22556791  T
Q  216 ggggtcagtcgacaatactaaaagtcatctggga 249  Q
     ||||||||||||||| || || ||| |||||||    
T  22556792 agggtcagtcgacaatccttaatgtcgtctggga 22556825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 18 - 249
Target Start/End: Original strand, 22557025 - 22557258
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| | |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||| |     
T  22557025 gaaggaaggcttatatgaattgtttggtactaccaatatcaacaagatgcatcttcttttcggtagctcattctttaagaacttcacagttaagcgtgcc 22557124  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctg-aaaaaattcatgttggtttgt 215  Q
    |||||||||||||||||||||||||||||||||| | || ||| ||| ||||| |||||||||| | ||||||||||| |||| | || |||||||||||    
T  22557125 tgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagcgtgcgagtgaggacaaaacacgctgtaaaagactcgtgttggtttgt 22557224  T
Q  216 ggggtcagtcgacaatactaaaagtcatctggga 249  Q
     ||||||||||||||| || || ||| |||||||    
T  22557225 agggtcagtcgacaatcctgaatgtcgtctggga 22557258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 18 - 239
Target Start/End: Original strand, 2474015 - 2474227
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||    
T  2474015 gaaggaaggcttataagaattgtttggtactgcctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgct 2474114  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    ||||||||||||||||||||||||||||||||          | ||| ||||| |||||||||| | ||||||||||||||| | || ||||||||||||    
T  2474115 tgacttggagcaattttgggatgggtgaccta----------tcccggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtg 2474204  T
Q  217 gggtcagtcgacaatactaaaag 239  Q
    |||||||||| |||| |||||||    
T  2474205 gggtcagtcggcaatcctaaaag 2474227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 17 - 231
Target Start/End: Complemental strand, 3886692 - 3886477
Alignment:
Q  17 agaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtac 115  Q
    |||||||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||      
T  3886692 agaaggaatgcttatatgaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgt 3886593  T
Q  116 ttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgt 215  Q
    ||||| |||||||||||| |||||||||||||||| | || ||| ||  ||||| |||||||||| | ||||||||||||||| | || |||||||||||    
T  3886592 ttgacgtggagcaatttttggatgggtgacctaccgggaagtttcccagtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgt 3886493  T
Q  216 ggggtcagtcgacaat 231  Q
    ||||||||||| ||||    
T  3886492 ggggtcagtcggcaat 3886477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 18 - 231
Target Start/End: Complemental strand, 8642124 - 8641911
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||    
T  8642124 gaaggaaggcttataagaattatttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgct 8642025  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||||||||||||||  ||||||||||||| | | || |||  || ||||| |||||||||| | ||||||||||||||| | || ||||||||||||    
T  8642024 tgacttggagcaattttaagatgggtgaccta-cgggaagtttctcggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtg 8641926  T
Q  217 gggtcagtcgacaat 231  Q
    |||||||||| ||||    
T  8641925 gggtcagtcggcaat 8641911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 22 - 231
Target Start/End: Complemental strand, 42788732 - 42788522
Alignment:
Q  22 gaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtacttgac 120  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||| ||||||    
T  42788732 gaagacttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccacaagaactccacagttaagcgtgcttgac 42788633  T
Q  121 ttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggt 220  Q
    |||||||||||||||||| ||||||||||| | || |||  || ||||| |||||||||| | ||||||||||||||| |  | ||||||||||||| ||    
T  42788632 ttggagcaattttgggataggtgacctaccgggaagtttctcggtaagcttgcgagtgaggacaaaacacgctgaaaagacccgtgttggtttgtggagt 42788533  T
Q  221 cagtcgacaat 231  Q
    |||||||||||    
T  42788532 cagtcgacaat 42788522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 18 - 231
Target Start/End: Complemental strand, 3887147 - 3886933
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    |||||||| |||| | ||||| ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||    
T  3887147 gaaggaagacttatatgaattatttggtactacctatatcaacaagatgcatcttcttttcggtaactcattccataagaacttcacagttaagcgtgct 3887048  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    ||||||||||||||||| |||||||||||||||  | || ||| ||  ||||| |||||||||| | |||||||||||| || | || ||||||||||||    
T  3887047 tgacttggagcaatttttggatgggtgacctactgggaagtttcccagtaagcgtgcgagtgaggacaaaacacgctgacaagactcgtgttggtttgtg 3886948  T
Q  217 gggtcagtcgacaat 231  Q
    |||||||||| ||||    
T  3886947 gggtcagtcggcaat 3886933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 18 - 227
Target Start/End: Complemental strand, 8391411 - 8391202
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagcta-ttccataagaacttcacagttaagcgtact 116  Q
    |||||||| |||| ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| ||||||||||||| || |||||||||| ||    
T  8391411 gaaggaagacttataagaattgtttggtact-cctgtatcaacaagatgcatcttcttttcggtagctaattccataagaactccatagttaagcgtgct 8391313  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||||||||||||||||||||||||||||||| | || |||  |||||| | |||||||||| | |||||||||||| || | || ||||| ||||||    
T  8391312 tgacttggagcaattttgggatgggtgacctaccgggaagtttctcgataaacgtgcgagtgaggacaaaacacgctgagaagactcgtgttgatttgtg 8391213  T
Q  217 gggtcagtcga 227  Q
    |||||||||||    
T  8391212 gggtcagtcga 8391202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 18 - 231
Target Start/End: Original strand, 2193872 - 2194074
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||    
T  2193872 gaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgct 2193971  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    ||||||||||||||||||||||||||||||||            ||| ||||  |||||||||| | ||||||||||||||| |  | ||||||||||||    
T  2193972 tgacttggagcaattttgggatgggtgaccta------------ccggtaagtgtgcgagtgaggacaaaacacgctgaaaagacccgtgttggtttgtg 2194059  T
Q  217 gggtcagtcgacaat 231  Q
    |||||||||||||||    
T  2194060 gggtcagtcgacaat 2194074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 18 - 249
Target Start/End: Original strand, 1821962 - 1822194
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||  |||||||||||||| |||| |||||||| ||    
T  1821962 gaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttctttttggtagcccattccataagaactccacatttaagcgtgct 1822061  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||||||| | | || |||||||||||||||| | || ||| ||| ||||| || || |||| | ||||||||||||||| | || |||||||||||     
T  1822062 tgacttggagtagtctttggatgggtgacctaccgggaagtttcccggtaagcgtgtgaatgaggacaaaacacgctgaaaagactcgtgttggtttgta 1822161  T
Q  217 gggtcagtcgacaatactaaaagtcatctggga 249  Q
    ||||| ||| ||||| || |||||| |||||||    
T  1822162 gggtcggtcaacaatgcttaaagtcgtctggga 1822194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 18 - 180
Target Start/End: Complemental strand, 21886236 - 21886073
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| || ||||||| || ||    
T  21886236 gaaggaaggcttataagaattgtttggtactacatatatcaacaagatgcatcttcttttcggtagctcattccataagaactccaaagttaagtgtgct 21886137  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgag 180  Q
    |||||||||||||||||||||||||||||||||  | || ||| ||| ||||| ||||||||||    
T  21886136 tgacttggagcaattttgggatgggtgacctactgggaagtttcccggtaagcgtgcgagtgag 21886073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 18 - 231
Target Start/End: Complemental strand, 10927493 - 10927279
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtag-ctattccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| | |||||||||||||| ||||||||| ||| ||    
T  10927493 gaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttctttttggtagcccattccataagaactccacagttaaacgtgct 10927394  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||||||| | | || |||||||||||| ||| | || |||| || ||||| || || |||| | ||||||||||||||| | || |||||||||||     
T  10927393 tgacttggagtagtctttggatgggtgaccgaccgggaagtttttcggtaagcgtgtgaatgaggacaaaacacgctgaaaagactcgtgttggtttgta 10927294  T
Q  217 gggtcagtcgacaat 231  Q
    ||||| |||||||||    
T  10927293 gggtcggtcgacaat 10927279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 18 - 241
Target Start/End: Complemental strand, 18750286 - 18750062
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagc-tattccataagaacttcacagttaagcgtact 116  Q
    ||||||||| ||| || ||||||||||||||||||||| ||| |||||||||||||||||||||||| ||||||||||||||| || | |||| ||||||    
T  18750286 gaaggaaggattataacaattgtttggtactacctataccaaaaagatgcatcttcttttcggtagcttattccataagaactccataattaatcgtact 18750187  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    ||||||||||||||||| ||||||||||||| | || || ||||     |||  |||||||||| | ||||||| ||||||| | ||  |||||||||||    
T  18750186 tgacttggagcaattttaggatgggtgaccttctaggaagttttttagaaagtgtgcgagtgaggacaaaacacactgaaaagactcgagttggtttgtg 18750087  T
Q  217 gggtcagtcgacaatactaaaagtc 241  Q
    ||||||||| |||||||| ||||||    
T  18750086 gggtcagtcaacaatacttaaagtc 18750062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 26 - 231
Target Start/End: Complemental strand, 15513093 - 15512888
Alignment:
Q  26 gcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtacttgacttgg 124  Q
    ||||| |||||||||| ||||||||| ||||||||||||||||||||||||| |||| || |||||||||||||| |||| |||| ||| |||||||||     
T  15513093 gcttataagaattgtt-ggtactaccaatatcaacaagatgcatcttctttttggtatctcattccataagaactccacaattaaacgtgcttgacttga 15512995  T
Q  125 agcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagt 224  Q
    |||||||||||||||| ||||||||| | || ||| ||| ||||| |||||||||| | |||| ||| |||||| | || ||||||||||||||||||||    
T  15512994 agcaattttgggatggatgacctaccgggaagtttcccggtaagcgtgcgagtgaggacaaaatacgttgaaaagactcgtgttggtttgtggggtcagt 15512895  T
Q  225 cgacaat 231  Q
    || ||||    
T  15512894 cggcaat 15512888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 18 - 243
Target Start/End: Complemental strand, 24182335 - 24182110
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| ||||||| |||||||||| ||||| |||||||||||||||||||| ||||| |  |  |||||| ||||| ||||||||||||  |    
T  24182335 gaaggaaggcttataagaattatttggtactatctataccaacaagatgcatcttcttt-cggtaccccaaaccataataacttaacagttaagcgtggt 24182237  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    ||||||||||||||||||||||||||||||| | | ||| |||  ||  |||  |||||||||| |||||||||| |||||| |||| ||||||||||||    
T  24182236 tgacttggagcaattttgggatgggtgaccttctaaaaagtttctcggaaagtgtgcgagtgaggataaaacacgttgaaaagattcgtgttggtttgtg 24182137  T
Q  217 gggtcagtcgacaatactaaaagtcat 243  Q
    |||| |||||||||| || ||||||||    
T  24182136 gggttagtcgacaatcctgaaagtcat 24182110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 18 - 226
Target Start/End: Complemental strand, 27646925 - 27646716
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtag-ctattccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| ||||| | ||| |||||||||| ||||||||||||| ||    
T  27646925 gaaggaaggcttataagaattgtttggtactacctataacaacaagatgcatcttctttttggtagcccatttcataagaactccacagttaagcgtgct 27646826  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    || ||||||| | | || | |||||||||||||| | || ||| || |||| | |||||||||| | |||||| |||||||| | ||||||||||||||     
T  27646825 tgtcttggagtagtctttgcatgggtgacctaccgggaagtttcccaataaacgtgcgagtgaggacaaaacatgctgaaaagactcatgttggtttgta 27646726  T
Q  217 gggtcagtcg 226  Q
     |||||||||    
T  27646725 tggtcagtcg 27646716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 18 - 150
Target Start/End: Original strand, 34867846 - 34867979
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| || |||||||||| ||    
T  34867846 gaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcatttcataagaactccatagttaagcgtgct 34867945  T
Q  117 tgacttggagcaattttgggatgggtgacctacc 150  Q
    | |||| ||||||||||||||| |||||| ||||    
T  34867946 taactttgagcaattttgggataggtgacttacc 34867979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 18 - 215
Target Start/End: Complemental strand, 20039564 - 20039367
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtag-ctattccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||| | ||||||||||||||  ||||||||| || ||    
T  20039564 gaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcattttctttt-ggtagcccattccataagaactctacagttaagtgtgct 20039466  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgt 215  Q
    |||||| ||| | | || |||| |||||||||   | || ||| ||| ||||| |||||||||| | ||||||||||||||| | ||||||||||||||    
T  20039465 tgacttagagtagtctttggattggtgacctattgggaagtttcccggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcatgttggtttgt 20039367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 18 - 231
Target Start/End: Complemental strand, 20858631 - 20858418
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    |||| |||||||| ||||||||||||||| |  ||||||||||||||||| |||||||||| |||||| |||||||||||||| || |||||||  | ||    
T  20858631 gaagaaaggcttataagaattgtttggtattttctatatcaacaagatgcttcttcttttctgtagctcattccataagaactccatagttaaggttgct 20858532  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    ||||||||||||| |||||||| |||||||| |  | || ||||| || |||||||| |||||| | ||||||||||||||| | || ||||| |||||     
T  20858531 tgacttggagcaactttgggat-ggtgaccttctgggaagttttctgaaaagcatgctagtgaggacaaaacacgctgaaaatactcgtgttgatttgtt 20858433  T
Q  217 gggtcagtcgacaat 231  Q
     ||||||||||||||    
T  20858432 aggtcagtcgacaat 20858418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 18 - 150
Target Start/End: Complemental strand, 10927036 - 10926903
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtag-ctattccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||| ||||| | |||||||||||||| ||||||||| ||| ||    
T  10927036 gaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttccttttggtagtccattccataagaactccacagttaaacgtgct 10926937  T
Q  117 tgacttggagcaattttgggatgggtgacctacc 150  Q
    |||||||||| | | || ||||||||||||||||    
T  10926936 tgacttggagtagtctttggatgggtgacctacc 10926903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 42 - 239
Target Start/End: Complemental strand, 11757347 - 11757149
Alignment:
Q  42 tggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgg 140  Q
    ||||||||| ||||||||||| |||||||||||||||||||| | | |||||||||||| ||||||||||||| ||||||||  |||||||| | |||||    
T  11757347 tggtactacttatatcaacaaaatgcatcttcttttcggtagttcaatccataagaactccacagttaagcgtgcttgacttacagcaatttcgagatgg 11757248  T
Q  141 gtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaag 239  Q
    |||||||||| | ||||||| || ||||| || ||||||| |  |||  |||| |||| | || |||||||||| ||||||||||| |||| |||||||    
T  11757247 gtgacctaccgggaaatttttcggtaagcgtgtgagtgaggacgaaatccgcttaaaagactcttgttggtttgcggggtcagtcggcaatcctaaaag 11757149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 42 - 247
Target Start/End: Complemental strand, 29680173 - 29679967
Alignment:
Q  42 tggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgg 140  Q
    ||||| |||||||||||||||||||||||||||||| ||||||  ||| |||||||||| |||||||||||||  ||||||||||| | | || ||||||    
T  29680173 tggtaatacctatatcaacaagatgcatcttctttttggtagcccattacataagaactccacagttaagcgtgtttgacttggagtagtctttggatgg 29680074  T
Q  141 gtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagt 240  Q
    ||||||| ||   || ||| ||||||||| ||| | |||| | ||||||||||||||| | || ||||||||||| |||||||||| |||| || |||||    
T  29680073 gtgaccttccgagaagtttcccgataagcgtgcaaatgaggacaaaacacgctgaaaagactcgtgttggtttgtagggtcagtcggcaatgcttaaagt 29679974  T
Q  241 catctgg 247  Q
    | |||||    
T  29679973 cgtctgg 29679967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 35 - 147
Target Start/End: Original strand, 18304504 - 18304617
Alignment:
Q  35 aattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaatttt 133  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| | ||||||||||| |  ||||||||||||||||||    
T  18304504 aattgtttggtactacctatatcaacaagatgcatattcttttcggtagctcattccataagaattccacagttaagcatgtttgacttggagcaatttt 18304603  T
Q  134 gggatgggtgacct 147  Q
    | ||||||||||||    
T  18304604 gtgatgggtgacct 18304617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 18 - 147
Target Start/End: Complemental strand, 30684646 - 30684516
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||| ||||||| | |||||||||||||||| |||||  |||||||||||||||||||||||||| | |  ||||||||||| ||||||||||||| ||    
T  30684646 gaagggaggcttatatgaattgtttggtactatctataaaaacaagatgcatcttcttttcggtaggtcaaaccataagaactccacagttaagcgtgct 30684547  T
Q  117 tgacttggagcaattttgggatgggtgacct 147  Q
      |||||||||||||||||||||||||||||    
T  30684546 caacttggagcaattttgggatgggtgacct 30684516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 18 - 145
Target Start/End: Complemental strand, 30719895 - 30719767
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| | ||||||||||||||||||||||  |||||||||||||||||||||||||| | |  ||||||||||| |||| |||||||| ||    
T  30719895 gaaggaaggcttatatgaattgtttggtactacctataaaaacaagatgcatcttcttttcggtaggtcaaaccataagaactccacaattaagcgtgct 30719796  T
Q  117 tgacttggagcaattttgggatgggtgac 145  Q
      ||||||||||||||||||| |||||||    
T  30719795 caacttggagcaattttgggacgggtgac 30719767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 18 - 126
Target Start/End: Original strand, 39146995 - 39147104
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtag-ctattccataagaacttcacagttaagcgtact 116  Q
    ||||| || |||| |||||||||||| |||||| ||||| |||||||||||||||||||| ||||| | |||||||||||||| ||||||||||||| ||    
T  39146995 gaaggtagacttataagaattgtttgatactacttatattaacaagatgcatcttctttttggtagcccattccataagaactccacagttaagcgtgct 39147094  T
Q  117 tgacttggag 126  Q
    ||||||||||    
T  39147095 tgacttggag 39147104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 91 - 231
Target Start/End: Complemental strand, 30720276 - 30720136
Alignment:
Q  91 ataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacac 190  Q
    |||||||||  |||||||| ||| ||||||||||| |||||||||||||| |||| | |  ||||  ||||||| |||| |||||| ||| | |||||||    
T  30720276 ataagaactctacagttaatcgtgcttgacttggaacaattttgggatggatgactttcttgaaagctttccgaaaagcgtgcgagcgaggacaaaacac 30720177  T
Q  191 gctgaaaaaattcatgttggtttgtggggtcagtcgacaat 231  Q
    |||||||| | || ||||||||||||| |||| ||||||||    
T  30720176 gctgaaaagactcctgttggtttgtggagtcaatcgacaat 30720136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 18 - 140
Target Start/End: Original strand, 42429201 - 42429324
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtag-ctattccataagaacttcacagttaagcgtact 116  Q
    |||||| | |||| ||||||||||||||||||||| ||||||||| |||||| |||||||| |||| |  || ||||||||||||| ||||||| || ||    
T  42429201 gaaggaggacttataagaattgtttggtactacctttatcaacaatatgcatattcttttccgtagcccgttacataagaacttcatagttaagggtgct 42429300  T
Q  117 tgacttggagcaattttgggatgg 140  Q
    ||||||  ||||||||||| ||||    
T  42429301 tgacttaaagcaattttggaatgg 42429324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 18 - 145
Target Start/End: Complemental strand, 16370798 - 16370673
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctattccataagaacttcacagttaagcgtactt 117  Q
    |||||||  |||| ||||||||||||||||||| ||||||||||||| | |||||||||| ||||||   |  || |||||  | ||||||||| |  ||    
T  16370798 gaaggaaaacttataagaattgtttggtactacttatatcaacaagacgtatcttctttttggtagc--ctaaatcagaaccccgcagttaagcatgttt 16370701  T
Q  118 gacttggagcaattttgggatgggtgac 145  Q
    ||||||||||||||||||||||||||||    
T  16370700 gacttggagcaattttgggatgggtgac 16370673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 32 - 108
Target Start/End: Complemental strand, 4658069 - 4657992
Alignment:
Q  32 aagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtag-ctattccataagaacttcacagtta 108  Q
    |||| ||||||| ||||||||||| |||||| |||||||||||||| ||||| | |||||||||||||||||||||||    
T  4658069 aagacttgtttgatactacctataacaacaacatgcatcttctttttggtagtccattccataagaacttcacagtta 4657992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 91 - 231
Target Start/End: Complemental strand, 30685027 - 30684887
Alignment:
Q  91 ataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacac 190  Q
    |||||||||  || |||||| || ||||||||||| |||||||| ||||| |||| | |  |||| |||||||| |||| ||| || ||| | |||||||    
T  30685027 ataagaactctacggttaagtgtgcttgacttggaacaattttgagatggatgactttcttgaaagttttccgaaaagcgtgcaagcgaggacaaaacac 30684928  T
Q  191 gctgaaaaaattcatgttggtttgtggggtcagtcgacaat 231  Q
    |||||||| | || |||||||||||||||||| ||| ||||    
T  30684927 gctgaaaagactcgtgttggtttgtggggtcaatcggcaat 30684887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 22 - 133
Target Start/End: Complemental strand, 32574744 - 32574632
Alignment:
Q  22 gaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtacttgac 120  Q
    ||||||||| | ||||||||||||||||||||||  ||||| |||||||||  ||| ||||||  |  | |||| ||||||| |||||||||| ||||||    
T  32574744 gaaggcttataggaattgtttggtactacctatacaaacaaaatgcatctttcttttggtagcccaaactataataacttcatagttaagcgtgcttgac 32574645  T
Q  121 ttggagcaatttt 133  Q
    |||||||||||||    
T  32574644 ttggagcaatttt 32574632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 44 - 246
Target Start/End: Original strand, 1880159 - 1880361
Alignment:
Q  44 gtactacctatatcaacaagatgcatcttcttttcggtag-ctattccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggt 142  Q
    ||||| ||||||| ||||| |||||| ||||||| ||||| |||||||| |||||||  |||||||||||| | ||| |||| | ||| || |||| | |    
T  1880159 gtacttcctatattaacaa-atgcatattctttttggtagtctattccacaagaactctacagttaagcgtgcatgagttggtgtaatatttggatagat 1880257  T
Q  143 gacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtca 242  Q
    ||| ||| || || ||||  | |||||  ||||||||| | ||||||||||||||| | || |||||||||||  |||| ||||||||| || ||||||     
T  1880258 gacttactaggaagttttatggtaagcgagcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtaaggtccgtcgacaatgcttaaagtcg 1880357  T
Q  243 tctg 246  Q
    ||||    
T  1880358 tctg 1880361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 112
Target Start/End: Complemental strand, 4673561 - 4673466
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcg 112  Q
    |||||||| |||| ||||||| |||||||  |||| |||||||||||||||| ||||||| ||||  | |||||||||||||| ||||||||||||    
T  4673561 gaaggaagtcttataagaattatttggtagcacctgtatcaacaagatgcatattctttttggtatttcattccataagaactccacagttaagcg 4673466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 147
Target Start/End: Original strand, 4102924 - 4102982
Alignment:
Q  89 ccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacct 147  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||| |||| |||||||    
T  4102924 ccataagaacttcacagttaaacgtgcttgacttggagcaattttgagatgagtgacct 4102982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 27 - 126
Target Start/End: Complemental strand, 5066972 - 5066872
Alignment:
Q  27 cttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtag-ctattccataagaacttcacagttaagcgtacttgacttgga 125  Q
    |||| ||||||||||||||| || ||||||||||||||||||| ||||||| ||||| ||||| ||||| |||| |||| |||| |||  ||| ||||||    
T  5066972 cttataagaattgtttggtattatctatatcaacaagatgcattttctttttggtagtctatttcataaaaactccacaattaaacgtgtttgccttgga 5066873  T
Q  126 g 126  Q
    |    
T  5066872 g 5066872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 2058746 - 2058696
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgca 68  Q
    |||||||| |||| | |||||||||||||||||||||||||||||||||||    
T  2058746 gaaggaagacttatatgaattgtttggtactacctatatcaacaagatgca 2058696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 11160771 - 11160713
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttt 76  Q
    ||||||||||||| || ||||||||||||||| |||| |||||||||||||| ||||||    
T  11160771 gaaggaaggcttataataattgtttggtactatctatgtcaacaagatgcatattcttt 11160713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 184 - 231
Target Start/End: Complemental strand, 21884008 - 21883961
Alignment:
Q  184 aaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 231  Q
    ||||||||||||||| | || |||||||||||||||||||||||||||    
T  21884008 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcgacaat 21883961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 72
Target Start/End: Complemental strand, 39801531 - 39801498
Alignment:
Q  39 gtttggtactacctatatcaacaagatgcatctt 72  Q
    ||||||||||||||||||||||||||||||||||    
T  39801531 gtttggtactacctatatcaacaagatgcatctt 39801498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 249
Target Start/End: Complemental strand, 38063800 - 38063687
Alignment:
Q  135 ggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatact 234  Q
    |||||||||||||||  | || ||||||| ||||| ||||| |||| | |||| ||||||| |||| || ||||||| ||| |||||| |||||||| ||    
T  38063800 ggatgggtgacctactgggaagttttccggtaagcgtgcgaatgaggacaaaatacgctga-aaaactcgtgttggtgtgtagggtcattcgacaatgct 38063702  T
Q  235 aaaagtcatctggga 249  Q
     | |||| |||||||    
T  38063701 tagagtcgtctggga 38063687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 77
Target Start/End: Complemental strand, 43356701 - 43356651
Alignment:
Q  27 cttaaaagaattgtttggtactacctatatcaacaagatgcatcttctttt 77  Q
    |||| |||||||||||||||| ||||| | |||||| ||||||||||||||    
T  43356701 cttataagaattgtttggtacaacctaaaccaacaatatgcatcttctttt 43356651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 213
Target Start/End: Original strand, 187754 - 187810
Alignment:
Q  157 ttttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggttt 213  Q
    ||||||| ||||| |||||||||| | ||||||||||||||| | || |||||||||    
T  187754 ttttccggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggttt 187810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 115 - 147
Target Start/End: Complemental strand, 2058650 - 2058618
Alignment:
Q  115 cttgacttggagcaattttgggatgggtgacct 147  Q
    ||||||||||||||||||||||||| |||||||    
T  2058650 cttgacttggagcaattttgggatgagtgacct 2058618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0499 (Bit Score: 153; Significance: 4e-81; HSPs: 1)
Name: scaffold0499
Description:

Target: scaffold0499; HSP #1
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 18 - 241
Target Start/End: Complemental strand, 2141 - 1917
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||    
T  2141 gaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgct 2042  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||||||||||||||||||||||||||||||| | || ||| ||| ||||| |||||||||| | |||| |||||||||| | || ||||||||||||    
T  2041 tgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagcgtgcgagtgaggacaaaatacgctgaaaagactcgtgttggtttgtg 1942  T
Q  217 gggtcagtcgacaatactaaaagtc 241  Q
    ||||||||||||||| |||||||||    
T  1941 gggtcagtcgacaatcctaaaagtc 1917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 150; Significance: 2e-79; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 19 - 239
Target Start/End: Complemental strand, 5399906 - 5399685
Alignment:
Q  19 aaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtactt 117  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| |||    
T  5399906 aagggaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaacttcatagttaagcgtgctt 5399807  T
Q  118 gacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtgg 217  Q
    ||||||||| ||||||||||||||||||||||||| || ||||||| ||||| |||||||||||| ||||||||||| ||| | |  |||||||||||||    
T  5399806 gacttggagaaattttgggatgggtgacctaccaggaagttttccggtaagcgtgcgagtgagaacaaaacacgctggaaagacttgtgttggtttgtgg 5399707  T
Q  218 ggtcagtcgacaatactaaaag 239  Q
    |||||||||||||| |||||||    
T  5399706 ggtcagtcgacaatcctaaaag 5399685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 18 - 231
Target Start/End: Complemental strand, 25338087 - 25337873
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||||| ||||||||||||| ||    
T  25338087 gaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttcttttcgatagctcatttcataagaactccacagttaagcgtgct 25337988  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||||||||||||||||||||||||||||||| | || ||| ||| ||||  |||||||||| | ||||||||||||||| | || ||||||||||||    
T  25337987 tgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagtgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtg 25337888  T
Q  217 gggtcagtcgacaat 231  Q
    |||||||||||||||    
T  25337887 gggtcagtcgacaat 25337873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 18 - 249
Target Start/End: Original strand, 33771057 - 33771289
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||| | ||    
T  33771057 gaagaaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcatttcataagaactccacagttaagcatgct 33771156  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||||||||||||||||||||||||||||||| | || ||| ||| |||||||||||||||| | ||||||| ||||||| | || ||||||||||||    
T  33771157 tgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagcatgcgagtgaggacaaaacacactgaaaagactcgtgttggtttgtg 33771256  T
Q  217 gggtcagtcgacaatactaaaagtcatctggga 249  Q
    ||||||| || |||| || ||||  ||||||||    
T  33771257 gggtcagccggcaattctgaaagcaatctggga 33771289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 19 - 240
Target Start/End: Original strand, 24818383 - 24818604
Alignment:
Q  19 aaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtactt 117  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||||| |||    
T  24818383 aaggaaggcttataagaattgtttagtactacctatatcaacaagatgcatctttttttcggtagctcattccataagaactccacagttaagcgtgctt 24818482  T
Q  118 gacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtgg 217  Q
    |||||||||||||||| |||||||||||||||| | || ||| | | ||||| |||||||||| | ||||||||||||||| | || |||||||||||||    
T  24818483 gacttggagcaatttt-ggatgggtgacctaccgggaagtttcctggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtgg 24818581  T
Q  218 ggtcagtcgacaatactaaaagt 240  Q
    |||||||||||||| || |||||    
T  24818582 ggtcagtcgacaatgctgaaagt 24818604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 18 - 231
Target Start/End: Original strand, 30966290 - 30966504
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| || |||||||||| ||    
T  30966290 gaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtatctcattccataagaactccatagttaagcgtgct 30966389  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    ||||||||| |||||||||||||||||||||||| | || |||  || |||||||||||||||| | |||||||| |||||| | || ||||||||||||    
T  30966390 tgacttggaccaattttgggatgggtgacctaccgggaagtttctcggtaagcatgcgagtgaggacaaaacacgttgaaaagactcgtgttggtttgtg 30966489  T
Q  217 gggtcagtcgacaat 231  Q
    |||||||||| ||||    
T  30966490 gggtcagtcggcaat 30966504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 18 - 211
Target Start/End: Original strand, 8256582 - 8256776
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||    
T  8256582 gaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgct 8256681  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggt 211  Q
    ||||||||||||||||||||||||||||||| |  | || ||||||||||||| |||||||||| | |||| |||||||||| | ||||||||||    
T  8256682 tgacttggagcaattttgggatgggtgacctgctgggaagttttccgataagcgtgcgagtgaggacaaaatacgctgaaaagactcatgttggt 8256776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 18 - 231
Target Start/End: Original strand, 30966746 - 30966960
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||    
T  30966746 gaaggaaggattataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgct 30966845  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    | |||||||||||||||||||||||||||||||| | || |||  || ||||| |||||||||| | |||||||| |||||| | || ||||||||||||    
T  30966846 taacttggagcaattttgggatgggtgacctaccgggaagtttctcggtaagcgtgcgagtgaggacaaaacacgttgaaaagactcgtgttggtttgtg 30966945  T
Q  217 gggtcagtcgacaat 231  Q
    | |||||||| ||||    
T  30966946 gagtcagtcggcaat 30966960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 165 - 296
Target Start/End: Original strand, 11389687 - 11389818
Alignment:
Q  165 taagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtcatctgggagtgtatgtctcttgc 264  Q
    ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  11389687 taagcatgcgagtgagaataaaacatgctgaaaaaactcatgttggtttgtggggtcagtcgacaatcctaaaagtcatctgggagtgtatgtctcttgc 11389786  T
Q  265 cgttactagacttataaggttcacattgactc 296  Q
    ||||||||||||||||||||||||||||||||    
T  11389787 cgttactagacttataaggttcacattgactc 11389818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 165 - 296
Target Start/End: Original strand, 11406348 - 11406479
Alignment:
Q  165 taagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtcatctgggagtgtatgtctcttgc 264  Q
    ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  11406348 taagcatgcgagtgagaataaaacatgctgaaaaaactcatgttggtttgtggggtcagtcgacaatcctaaaagtcatctgggagtgtatgtctcttgc 11406447  T
Q  265 cgttactagacttataaggttcacattgactc 296  Q
    ||||||||||||||||||||||||||||||||    
T  11406448 cgttactagacttataaggttcacattgactc 11406479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 18 - 223
Target Start/End: Complemental strand, 29259710 - 29259504
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    |||||||||||||  | |||||||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||||| ||    
T  29259710 gaaggaaggcttattaaaattgtttggtactacatatatcaacaagatgcatcttcttttcggtagctcatttcataagaacttcatagttaagcgtgct 29259611  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||| ||||||||||||||||||||||||||| | || ||| ||| |||||||||||||||| | |||||||| |||||| | || ||||||||||||    
T  29259610 tgactttgagcaattttgggatgggtgacctaccgggaagtttcccggtaagcatgcgagtgaggacaaaacacgttgaaaagactcgtgttggtttgtg 29259511  T
Q  217 gggtcag 223  Q
    || ||||    
T  29259510 ggatcag 29259504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 18 - 193
Target Start/End: Original strand, 41754345 - 41754521
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||    
T  41754345 gaaggaaggcttataagaattgtttggtactatctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgct 41754444  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgct 193  Q
    |||||||||||||||||||||||| ||||||||| |||| ||| ||| ||| | |||||||||| | ||||||||||    
T  41754445 tgacttggagcaattttgggatggatgacctaccggaaagtttcccggtaaacgtgcgagtgaggacaaaacacgct 41754521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 18 - 149
Target Start/End: Original strand, 11394591 - 11394721
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctattccataagaacttcacagttaagcgtactt 117  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  11394591 gaaggaatgcttaaaa-aattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctattccataagaacttcacagttaagcgtgctt 11394689  T
Q  118 gacttggagcaattttgggatgggtgacctac 149  Q
    ||||||||||||||||||||||||||||||||    
T  11394690 gacttggagcaattttgggatgggtgacctac 11394721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 18 - 149
Target Start/End: Original strand, 11388244 - 11388375
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||    
T  11388244 gaaggaatgcttaaaa-aattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgct 11388342  T
Q  117 tgacttggagcaattttgggatgggtgacctac 149  Q
    |||||||||||||||||||||||||||||||||    
T  11388343 tgacttggagcaattttgggatgggtgacctac 11388375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 18 - 240
Target Start/End: Original strand, 16378993 - 16379216
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagc-tattccataagaacttcacagttaagcgtact 116  Q
    |||||||| |||| | |||||||||| ||||||||||||||||||||||||||||||||| ||||||  |||||||||||||| ||||||||||||| ||    
T  16378993 gaaggaagtcttatacgaattgtttgatactacctatatcaacaagatgcatcttctttttggtagcacattccataagaactccacagttaagcgtgct 16379092  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||||||| | | || |||||||||||||| | | || ||| | | ||||| |||||||||| | ||||||||||||||| | || |||||||||||     
T  16379093 tgacttggagtagtctttggatgggtgacctatcgggaagtttccgggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgta 16379192  T
Q  217 gggtcagtcgacaatactaaaagt 240  Q
    ||||||||||||||| || |||||    
T  16379193 gggtcagtcgacaatgcttaaagt 16379216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 18 - 240
Target Start/End: Original strand, 16379449 - 16379672
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagc-tattccataagaacttcacagttaagcgtact 116  Q
    |||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||| ||||||  |||||||||||||| |||||||||||||  |    
T  16379449 gaaggaagacttatacgaattgtttggtactacctatatcaacaagatgcatcttctttttggtagcacattccataagaactccacagttaagcgtgtt 16379548  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||||||| ||| || |||||||||||||||| | || |||  |  ||||| |||||||||| | ||||||||||||||| | || |||||||||||     
T  16379549 tgacttggagtaatctttggatgggtgacctaccgggaagtttcactgtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgta 16379648  T
Q  217 gggtcagtcgacaatactaaaagt 240  Q
    |||||| |||||||| || |||||    
T  16379649 gggtcattcgacaatgcttaaagt 16379672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 68 - 239
Target Start/End: Complemental strand, 32377756 - 32377584
Alignment:
Q  68 atcttcttttcggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgata 166  Q
    ||||| |||||||||||| |||||| ||||||| ||||||||||| | |||||||||||||||||||||||| ||||||||||| |||| ||||||| ||    
T  32377756 atcttgttttcggtagctcattccaaaagaactccacagttaagcatgcttgacttggagcaattttgggataggtgacctaccggaaagttttccggta 32377657  T
Q  167 agcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaag 239  Q
    ||| |||||||||| | ||||||||||||||||| || |||||||||||||||||||||| |||| |||||||    
T  32377656 agcgtgcgagtgaggacaaaacacgctgaaaaaactcgtgttggtttgtggggtcagtcggcaatcctaaaag 32377584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 18 - 231
Target Start/End: Original strand, 33175014 - 33175226
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||||| |||||||||||||  |    
T  33175014 gaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttctttttggtagctcatttcataagaactccacagttaagcgt-gt 33175112  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||||||| | | ||  ||||||||||||||| | ||| || ||| ||||| |||||||||| | ||||||||||| ||| | || |||| ||||||     
T  33175113 tgacttggagtattcttatgatgggtgacctaccgggaaa-ttcccggtaagcgtgcgagtgaggacaaaacacgctggaaagactcgtgttagtttgta 33175211  T
Q  217 gggtcagtcgacaat 231  Q
    |||||||||| ||||    
T  33175212 gggtcagtcggcaat 33175226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 18 - 249
Target Start/End: Complemental strand, 25434146 - 25433914
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| |||||||||||| ||| |||| |||||||||||||||||| ||||  ||||||  |||||||||||||| ||||||||||||| ||    
T  25434146 gaaggaaggcttataagaattgtttgatacaacctttatcaacaagatgcatctcctttctggtagcccattccataagaactccacagttaagcgtgct 25434047  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    ||||||||||   | || |||||||||||| ||  | || ||||| | ||||| || |||| || | ||||||||||||||| |||| |||||||||||     
T  25434046 tgacttggagtggtctttggatgggtgaccaacagggaagttttctggtaagcgtgtgagtaaggacaaaacacgctgaaaagattcgtgttggtttgta 25433947  T
Q  217 gggtcagtcgacaatactaaaagtcatctggga 249  Q
    |||||||||| |||| || ||||||||||||||    
T  25433946 gggtcagtcggcaatgcttaaagtcatctggga 25433914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 18 - 149
Target Start/End: Original strand, 29804738 - 29804870
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||| ||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||    
T  29804738 gaaggcaggcttataagaattgttgggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgct 29804837  T
Q  117 tgacttggagcaattttgggatgggtgacctac 149  Q
    ||||||| |||||||||||||||  ||||||||    
T  29804838 tgacttgaagcaattttgggatgtttgacctac 29804870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 32 - 249
Target Start/End: Original strand, 1912595 - 1912812
Alignment:
Q  32 aagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaat 130  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||  |||||||||||||| |||||||||||||  ||||||||||| | |    
T  1912595 aagaattgtttggtactacctatatcaacaagatgcatcttctttt-ggtagcccattccataagaactccacagttaagcgtgattgacttggagtact 1912693  T
Q  131 tttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaa 230  Q
     || |||||||| ||||||| | || |||  || ||||| |||||||||| | |||||||| |||||| | || ||||||||||| | |||||||| |||    
T  1912694 ctttggatgggttacctaccgggaagtttctcggtaagcgtgcgagtgaggacaaaacacgttgaaaagactcgtgttggtttgtagagtcagtcggcaa 1912793  T
Q  231 tactaaaagtcatctggga 249  Q
    | || |||||| |||||||    
T  1912794 tgcttaaagtcgtctggga 1912812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 18 - 249
Target Start/End: Original strand, 1707097 - 1707329
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtag-ctattccataagaacttcacagttaagcgtact 116  Q
    |||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||  |||||||||| |||||||||| ||  |    
T  1707097 gaaggaagacttataagaattgtttggtactacctatatcaacaagatgcatcttctttttggtagcccatctcataagaactccacagttaagagtgtt 1707196  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    ||||||| || | | || |||||||||||||||||| || ||| ||| ||||| |||||||||  | |||||||||| |||| ||||  |||| ||| |     
T  1707197 tgacttgaagtagtctttggatgggtgacctaccaggaagtttcccggtaagcgtgcgagtgaatacaaaacacgctaaaaagattcgcgttgatttata 1707296  T
Q  217 gggtcagtcgacaatactaaaagtcatctggga 249  Q
    |||||||||| |||| || |||||| |||||||    
T  1707297 gggtcagtcggcaatgcttaaagtcgtctggga 1707329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 18 - 241
Target Start/End: Original strand, 33174559 - 33174782
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtag-ctattccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| | ||||||||||| ||    
T  33174559 gaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagcccattccataagaactccgcagttaagcgtgct 33174658  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||||||| | | ||  |||||||||| |||| | ||| || ||| ||||| ||||||| || | |||||| |||  ||| |  | |||| ||||||     
T  33174659 tgacttggagtagtcttatgatgggtgacataccgggaaa-ttcccggtaagcgtgcgagttaggaaaaaacatgctagaaagacccgtgtttgtttgta 33174757  T
Q  217 gggtcagtcgacaatactaaaagtc 241  Q
    ||||||||||||||| || ||||||    
T  33174758 gggtcagtcgacaatgcttaaagtc 33174782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 18 - 231
Target Start/End: Complemental strand, 30963353 - 30963139
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtag-ctattccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||||||||||| |||| ||||| | |   |||||||| |  |||||||||||| ||    
T  30963353 gaaggaaggcttataagaattgttaggtactacctatatcaacaagatgcatcttatttttggtagcccaaatcataagaattcaacagttaagcgtgct 30963254  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    ||||||||||||||||||||||| ||||||| |  | || |||  ||  |||| |||||||||| |||||| ||| |||||| | || ||||||||||||    
T  30963253 tgacttggagcaattttgggatgagtgaccttcttggaagtttctcggaaagcgtgcgagtgaggataaaatacgttgaaaagactcgtgttggtttgtg 30963154  T
Q  217 gggtcagtcgacaat 231  Q
     ||||| ||| ||||    
T  30963153 aggtcaatcggcaat 30963139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 93 - 231
Target Start/End: Complemental strand, 32377921 - 32377783
Alignment:
Q  93 aagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgc 192  Q
    ||||||| |||||||||||||  ||||||||||||||||||||||||||||| ||||  | || ||||||| ||||| |||||||||| | |||||||||    
T  32377921 aagaactccacagttaagcgtgtttgacttggagcaattttgggatgggtgatctactgggaagttttccggtaagcgtgcgagtgaggacaaaacacgc 32377822  T
Q  193 tgaaaaaattcatgttggtttgtggggtcagtcgacaat 231  Q
    |||||| | || |||||||||||||||||||||| ||||    
T  32377821 tgaaaagactcgtgttggtttgtggggtcagtcggcaat 32377783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 34 - 249
Target Start/End: Original strand, 15639806 - 15640022
Alignment:
Q  34 gaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattt 132  Q
    ||||||||||||||||||||||||||||| || ||||||||||| || | |  | |||| ||||||| |||| |||||||| |||||||||||| | | |    
T  15639806 gaattgtttggtactacctatatcaacaacatacatcttctttttggaaacccaatccacaagaactccacaattaagcgtgcttgacttggagtagtct 15639905  T
Q  133 tgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaata 232  Q
    | |||||||||||||||  | || |||  |||||||| |||||||||| | ||||||||| ||||| | || |||||||| || |||||||||| ||||     
T  15639906 ttggatgggtgacctactgggaagtttctcgataagcgtgcgagtgaggacaaaacacgcagaaaagactcgtgttggttggtagggtcagtcggcaatg 15640005  T
Q  233 ctaaaagtcatctggga 249  Q
    || |||||| |||||||    
T  15640006 cttaaagtcgtctggga 15640022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 18 - 248
Target Start/End: Original strand, 8073948 - 8074179
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtag-ctattccataagaacttcacagttaagcgtact 116  Q
    ||||| || |||| |||||||||||||||||||||||| ||||||||||||||||||||   |||| | ||| |||||||||| || || ||||| | ||    
T  8073948 gaagggagacttataagaattgtttggtactacctataccaacaagatgcatcttctttcttgtagcccatttcataagaactccatagataagccttct 8074047  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    ||||||||   |||||||||||| ||||||| ||||||| |||  ||| |||  || || |||||| |||||||| |||||||| |  |||| |||||||    
T  8074048 tgacttggttaaattttgggatgagtgaccttccagaaagtttctcgaaaagtgtgtgattgagaacaaaacacgatgaaaaaacttgtgtttgtttgtg 8074147  T
Q  217 gggtcagtcgacaatactaaaagtcatctggg 248  Q
    || ||||||||||||  | ||||| |||||||    
T  8074148 ggatcagtcgacaatcttgaaagttatctggg 8074179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 19 - 147
Target Start/End: Complemental strand, 30961972 - 30961843
Alignment:
Q  19 aaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtactt 117  Q
    ||||||| |||| |||| ||| ||||||||||||||||||||||||||||| || |||||||||||  |  ||||||||||| ||||||||| ||| |||    
T  30961972 aaggaagtcttataagatttgattggtactacctatatcaacaagatgcatatttttttcggtagccgaaaccataagaactccacagttaaacgtgctt 30961873  T
Q  118 gacttggagcaattttgggatgggtgacct 147  Q
    ||||| ||||||||||||||||||||||||    
T  30961872 gacttagagcaattttgggatgggtgacct 30961843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 26 - 212
Target Start/End: Original strand, 15619962 - 15620149
Alignment:
Q  26 gcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcgg-tagctattccataagaacttcacagttaagcgtacttgacttgg 124  Q
    ||||| |||||||||||||||||||||||||||||||||| ||||||||||| ||  | | | |||||||||||| |||| |||||||| |||||||| |    
T  15619962 gcttataagaattgtttggtactacctatatcaacaagatacatcttctttttggaaacccaatccataagaactccacaattaagcgtgcttgactttg 15620061  T
Q  125 agcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtt 212  Q
    || | | || |||||||||||||||  | || |||  || ||||| |||||||||| | ||||| ||||||||| | || ||||||||    
T  15620062 agtagtctttggatgggtgacctactgggaagtttctcggtaagcgtgcgagtgaggacaaaactcgctgaaaagactcgtgttggtt 15620149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 26 - 111
Target Start/End: Complemental strand, 18098960 - 18098874
Alignment:
Q  26 gcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagc 111  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| || ||||||||    
T  18098960 gcttataagaattgtttggtactacctatatcaacaagatgcatcttctttttggtagctcattccataagaactccatagttaagc 18098874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 26 - 150
Target Start/End: Complemental strand, 38898994 - 38898869
Alignment:
Q  26 gcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagc-tattccataagaacttcacagttaagcgtacttgacttgg 124  Q
    ||||| |||||||||||||||||||||||||||||||||||||| ||||||| |||| |  ||| |||||||||| ||||||||||||| |||||||| |    
T  38898994 gcttataagaattgtttggtactacctatatcaacaagatgcattttctttttggtaacacatttcataagaactccacagttaagcgtgcttgacttag 38898895  T
Q  125 agcaattttgggatgggtgacctacc 150  Q
    || | | || |||| |||||||||||    
T  38898894 agtagtctttggataggtgacctacc 38898869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 226
Target Start/End: Complemental strand, 30963810 - 30963601
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtag-ctattccataagaacttcacagttaagcgtact 116  Q
    |||||||  |||| ||||||||| |||| ||||||||||||||||||||||||||||||  ||||| | |  |||||| |||| ||||||||||||| ||    
T  30963810 gaaggaaaacttataagaattgtatggttctacctatatcaacaagatgcatcttctttctggtagcccaaaccataataactccacagttaagcgtgct 30963711  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||||| | | ||||||||| |||||||| | || || |||  ||  || | |||||||||| | |||||||  |||||| | || | ||||||||||    
T  30963710 tgacttggcggagttttgggataggtgaccttctaggaagtttgtcggaaaccgtgcgagtgaggacaaaacacagtgaaaagactcgttttggtttgtg 30963611  T
Q  217 gggtcagtcg 226  Q
    || |||||||    
T  30963610 ggatcagtcg 30963601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 19 - 249
Target Start/End: Original strand, 13191031 - 13191262
Alignment:
Q  19 aaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtag-ctattccataagaacttcacagttaagcgtactt 117  Q
    ||||||| |||| ||||||||||||||||||| |||| ||||||||||||||||||||| ||||| | |||  ||||||||| || ||||| | || |||    
T  13191031 aaggaagacttataagaattgtttggtactacatataccaacaagatgcatcttctttttggtagtccattttataagaactccatagttatgtgtgctt 13191130  T
Q  118 gacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtgg 217  Q
    |||||| || ||||||| ||| |||||||| |  |||| |||  | | |||| || || || | | |||||||||| |||| | |  ||||||||| |||    
T  13191131 gacttgaagaaattttgagataggtgaccttctggaaagtttctcaaaaagcgtgtgaatgcggacaaaacacgctaaaaagactagtgttggtttatgg 13191230  T
Q  218 ggtcagtcgacaatactaaaagtcatctggga 249  Q
     |||||||||||||  | |||||||| |||||    
T  13191231 agtcagtcgacaatcttgaaagtcatatggga 13191262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 26 - 147
Target Start/End: Original strand, 83081 - 83203
Alignment:
Q  26 gcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtacttgacttgg 124  Q
    ||||| |||||| ||||||||||||||||| |||||||||| ||||| |||| ||||||| ||||||||||||||  ||||||||||||  |||| ||||    
T  83081 gcttataagaatcgtttggtactacctataccaacaagatgaatcttttttttggtagctcattccataagaactctacagttaagcgtgtttgatttgg 83180  T
Q  125 agcaattttgggatgggtgacct 147  Q
    | |||||||| |||  |||||||    
T  83181 aacaattttgtgatatgtgacct 83203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 215
Target Start/End: Complemental strand, 27883016 - 27882818
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggta-gctattccataagaacttcacagttaagcgtact 116  Q
    ||||||| ||||| ||||||||||||||| || ||||||||| |||||||||||||||||  ||| ||  ||||||||||||| |||| ||||||||  |    
T  27883016 gaaggaatgcttataagaattgtttggtattatctatatcaataagatgcatcttcttttttgtaggccgttccataagaactccacaattaagcgtgtt 27882917  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgt 215  Q
    |||||||||| | | || |||| ||||||||||    || |||| || ||||  ||| ||| || | ||||||||||||||| | || |||||||||||    
T  27882916 tgacttggagtagtctttggataggtgacctactgagaagtttttcggtaagtgtgcaagtcaggacaaaacacgctgaaaagaatcttgttggtttgt 27882818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 18 - 147
Target Start/End: Original strand, 1953211 - 1953341
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtag-ctattccataagaacttcacagttaagcgtact 116  Q
    |||||||| | || ||||||||||||||||||||||||||||| |||||||||||||||| ||||| | |  ||||||  ||||||  ||||||| | ||    
T  1953211 gaaggaagacctataagaattgtttggtactacctatatcaactagatgcatcttctttttggtagtccaaaccataattacttcatggttaagcatgct 1953310  T
Q  117 tgacttggagcaattttgggatgggtgacct 147  Q
    | |||| | || |||||||||||||| ||||    
T  1953311 taactttgcgctattttgggatgggttacct 1953341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 109
Target Start/End: Original strand, 20502079 - 20502170
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtag-ctattccataagaacttcacagttaa 109  Q
    ||||||||||||| |||||||||||||||||  ||||||||||||||||| |||| |||| ||||| | ||| ||||||||||||||| ||||    
T  20502079 gaaggaaggcttataagaattgtttggtactttctatatcaacaagatgcttctt-tttttggtagcccatttcataagaacttcacaattaa 20502170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 139
Target Start/End: Original strand, 16542041 - 16542164
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcgg-tagct-attccataagaacttcacagttaagcgtac 115  Q
    |||||||| |||| || |||||||| ||||||||||||||||||||||| ||||| ||||    ||||| ||||||||| ||||  ||||||||  ||      
T  16542041 gaaggaagacttataataattgttttgtactacctatatcaacaagatgtatcttttttttttatagctcattccataaaaactctacagttaaatgtgt 16542140  T
Q  116 ttgacttggagcaattttgggatg 139  Q
    |||||||||||||||||| |||||    
T  16542141 ttgacttggagcaattttaggatg 16542164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 36924514 - 36924453
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactac--ctatatcaacaagatgcatcttctttt 77  Q
    ||||||||||||| ||||||||||||||| |||   ||||||||||||||||||||||||||    
T  36924514 gaaggaaggcttataagaattgtttggtattacttatatatcaacaagatgcatcttctttt 36924453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 249
Target Start/End: Complemental strand, 8181333 - 8181219
Alignment:
Q  135 ggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatac- 233  Q
    |||||||||||||||  | || ||||||||||| | ||| |||||| | ||||||||||||||| | || ||||||||||   |||||||||||||| |     
T  8181333 ggatgggtgacctactgggaagttttccgataaacgtgcaagtgaggacaaaacacgctgaaaagactcgtgttggtttg-caggtcagtcgacaatgct 8181235  T
Q  234 taaaagtcatctggga 249  Q
    |||||||| |||||||    
T  8181234 taaaagtcgtctggga 8181219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 65
Target Start/End: Complemental strand, 8181441 - 8181394
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagat 65  Q
    |||||||| |||  ||||||||||||||||||||||||||||||||||    
T  8181441 gaaggaagacttttaagaattgtttggtactacctatatcaacaagat 8181394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 229
Target Start/End: Original strand, 37552632 - 37552833
Alignment:
Q  27 cttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtacttgacttgga 125  Q
    |||| ||||||||||||||||||| |||| ||| | ||||| ||||||||| || |||  ||||| |||||| | ||||||||||| | ||||||||  |    
T  37552632 cttataagaattgtttggtactacatata-caaaatgatgc-tcttctttttggcagcgcattccgtaagaattccacagttaagcatgcttgactttaa 37552729  T
Q  126 gcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtc 225  Q
     ||||| ||||| |||  |||| |   ||| ||| |||| || ||||||| |||| | |||||||||| |||| |  | ||||||||||| |||||||||    
T  37552730 tcaattctgggacgggaaaccttctgaaaagtttcccgaaaatcatgcgattgaggaaaaaacacgcttaaaatacccgtgttggtttgtagggtcagtc 37552829  T
Q  226 gaca 229  Q
    ||||    
T  37552830 gaca 37552833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 18448008 - 18447954
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatctt 72  Q
    |||| ||| |||| ||||||||||||||||||| | |||||||||||||||||||    
T  18448008 gaagtaagacttataagaattgtttggtactacttgtatcaacaagatgcatctt 18447954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 26864905 - 26864851
Alignment:
Q  19 aaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttc 73  Q
    |||||||||||  ||||| | |||||||||||||| ||| |||||||||||||||    
T  26864905 aaggaaggcttgtaagaactctttggtactacctacatcgacaagatgcatcttc 26864851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 231
Target Start/End: Original strand, 29804871 - 29804917
Alignment:
Q  185 aaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 231  Q
    |||||||||||||| | || |||||||||||||| ||||||||||||    
T  29804871 aaacacgctgaaaagactcgtgttggtttgtgggatcagtcgacaat 29804917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 231
Target Start/End: Original strand, 20502174 - 20502234
Alignment:
Q  171 tgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 231  Q
    |||||||||| | ||||||||||||||| | || |||| |||||| |||||||||| ||||    
T  20502174 tgcgagtgaggacaaaacacgctgaaaagactcgtgttagtttgtagggtcagtcggcaat 20502234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 147; Significance: 2e-77; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 18 - 231
Target Start/End: Original strand, 42515600 - 42515814
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||    
T  42515600 gaaggaaggcttataagaagtgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgct 42515699  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||||||||||||||||||||||||||||||  | |||||||||| ||||| |||||||||| | ||||||||||||||| | || ||||||||||||    
T  42515700 tgacttggagcaattttgggatgggtgacctacatggaaattttccggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtg 42515799  T
Q  217 gggtcagtcgacaat 231  Q
    |||||||||| ||||    
T  42515800 gggtcagtcggcaat 42515814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 18 - 240
Target Start/End: Complemental strand, 34405681 - 34405458
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||    
T  34405681 gaaggaaggcttataagaattgttgggtactacctatatcaacaggatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgct 34405582  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||||||||||||||||||||||||||||||| | || ||| ||| ||||| |||||||||| | ||||||||||||||| |  | ||||| ||||||    
T  34405581 tgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagcgtgcgagtgaggacaaaacacgctgaaaagacccgtgttgatttgtg 34405482  T
Q  217 gggtcagtcgacaatactaaaagt 240  Q
    ||||||||||||||| ||||||||    
T  34405481 gggtcagtcgacaatcctaaaagt 34405458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 18 - 231
Target Start/End: Complemental strand, 2941847 - 2941633
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||    
T  2941847 gaaggaaggctgataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgct 2941748  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||||||||||||||||||||||||||||||| | || ||| ||| ||||| |||||||||| | ||||||||||||||| | || ||||||||||||    
T  2941747 tgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagcgtgcgagtgaggagaaaacacgctgaaaagactcgtgttggtttgtg 2941648  T
Q  217 gggtcagtcgacaat 231  Q
     ||||||||| ||||    
T  2941647 cggtcagtcggcaat 2941633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 19 - 231
Target Start/End: Original strand, 9125016 - 9125229
Alignment:
Q  19 aaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtactt 117  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| |||    
T  9125016 aaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgctt 9125115  T
Q  118 gacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtgg 217  Q
    |||| |||||||||||||||||||||||||||| | || ||||||| ||||| |||||||||| | |||||| |||||||| | || |||||||||||||    
T  9125116 gactcggagcaattttgggatgggtgacctaccgggaagttttccggtaagcgtgcgagtgaggacaaaacatgctgaaaagactcgtgttggtttgtgg 9125215  T
Q  218 ggtcagtcgacaat 231  Q
    ||||||||| ||||    
T  9125216 ggtcagtcggcaat 9125229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 18 - 249
Target Start/End: Original strand, 2465980 - 2466211
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||||| ||    
T  2465980 gaaggaaggcttataagagttgtttggtactacctatatcaacaagttgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgct 2466079  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||||||||||||| ||||||||||||||||| | |||||| ||| ||||||||| |||||| | ||||||||||||||| | || |||| ||||||     
T  2466080 tgacttggagcaatttcgggatgggtgacctaccgggaaatttcccggtaagcatgcaagtgaggacaaaacacgctgaaaagactcgtgttagtttgt- 2466178  T
Q  217 gggtcagtcgacaatactaaaagtcatctggga 249  Q
     |||||||||||||| || |||||| |||||||    
T  2466179 aggtcagtcgacaatgcttaaagtcgtctggga 2466211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 18 - 231
Target Start/End: Original strand, 28495910 - 28496124
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||    
T  28495910 gaaggaaggcttataagaactgttgggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgct 28496009  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    ||||||||||||||||||||||||||||||||   | || ||| ||| ||||| |||||||||| | ||||||||||||||| | || ||||||||||||    
T  28496010 tgacttggagcaattttgggatgggtgacctattgggaagtttcccggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtg 28496109  T
Q  217 gggtcagtcgacaat 231  Q
    |||||||||| ||||    
T  28496110 gggtcagtcggcaat 28496124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 18 - 231
Target Start/End: Original strand, 36422308 - 36422521
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||| ||    
T  36422308 gaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttcttttcggtagctcatttcataagaactccacagttaagcgtgct 36422407  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    ||||||||||||| |||||||||||||||||||| | || ||| ||| ||||  |||||||||| | ||||||||||||||| | || ||||||||||||    
T  36422408 tgacttggagcaa-tttgggatgggtgacctaccgggaagtttcccggtaagtgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtg 36422506  T
Q  217 gggtcagtcgacaat 231  Q
    |||||||||||||||    
T  36422507 gggtcagtcgacaat 36422521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 18 - 231
Target Start/End: Complemental strand, 13125226 - 13125011
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||    
T  13125226 gaaggaaggcttataagaattgtttggtactacctatattaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgct 13125127  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtga-gaataaaacacgctgaaaaaattcatgttggtttgt 215  Q
    |||||||||||||||||||||||||||||||||| | || ||| ||  ||||| ||||||||| ||  ||||||||||||||  | || |||||||||||    
T  13125126 tgacttggagcaattttgggatgggtgacctaccgggaagtttcccagtaagcgtgcgagtgaggacaaaaacacgctgaaaggactcgtgttggtttgt 13125027  T
Q  216 ggggtcagtcgacaat 231  Q
    ||||||||||| ||||    
T  13125026 ggggtcagtcggcaat 13125011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 18 - 180
Target Start/End: Original strand, 2465789 - 2465952
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||    
T  2465789 gaaggaaggcttataagagttgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgct 2465888  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgag 180  Q
    |||||||||||||||||||||||||||||||||| | |||||| ||| ||||||||||||||||    
T  2465889 tgacttggagcaattttgggatgggtgacctaccgggaaatttcccggtaagcatgcgagtgag 2465952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 18 - 231
Target Start/End: Original strand, 2193312 - 2193526
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| |||| ||||| ||||||||||||| ||    
T  2193312 gaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttctattcggtagctcatttcataggaactccacagttaagcgtgct 2193411  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    ||| |||||||||||||||||||||||||||||| | || ||| ||| ||||| || ||||||| | ||||||||||||||| | || ||||| ||||||    
T  2193412 tgatttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagcgtgtgagtgaggacaaaacacgctgaaaagactcgtgttgatttgtg 2193511  T
Q  217 gggtcagtcgacaat 231  Q
    |||||||||| ||||    
T  2193512 gggtcagtcggcaat 2193526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 18 - 249
Target Start/End: Complemental strand, 6719164 - 6718933
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || |||||||||| ||    
T  6719164 gaaggaatgcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccagagttaagcgtgct 6719065  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||||||| || ||||||||||||||| || | | || ||| ||| ||||| |||||||||| | ||||||| ||||||| | || ||||||||||||    
T  6719064 tgacttggagtaa-tttgggatgggtgacatatcgggaactttcccggtaagcgtgcgagtgaggacaaaacacactgaaaagaatcgtgttggtttgtg 6718966  T
Q  217 gggtcagtcgacaatactaaaagtcatctggga 249  Q
    |||||||||  |||| ||||||||| |||||||    
T  6718965 gggtcagtcagcaatcctaaaagtcgtctggga 6718933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 61 - 249
Target Start/End: Original strand, 7646514 - 7646703
Alignment:
Q  61 aagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattt 159  Q
    |||||||||||| ||||||||| || |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| |||| |||    
T  7646514 aagatgcatcttgttttcggtaactcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccggaaagttt 7646613  T
Q  160 tccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtcatctggga 249  Q
    |||||||||| |||||||||| | ||||||| ||||||| | || |||||||||||||||| |||||||||| ||||||||| |||||||    
T  7646614 tccgataagcgtgcgagtgaggacaaaacacactgaaaagactcgtgttggtttgtggggttagtcgacaatcctaaaagtcgtctggga 7646703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 18 - 246
Target Start/End: Original strand, 42515148 - 42515377
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    |||||||| |||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||||||||||| ||||||||||||| ||    
T  42515148 gaaggaagacttataagaattgtttggtactacctatatcaacaagatgcattttctttttggtagctcattccataagaactccacagttaagcgtgct 42515247  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||||||| | | || ||||||||||| |||||| || |||| || ||||| |||| ||||| | ||||||||||||||| | || |||||||||||     
T  42515248 tgacttggagtagtctttggatgggtgacataccaggaactttttcggtaagcgtgcgggtgaggacaaaacacgctgaaaagactcgtgttggtttgta 42515347  T
Q  217 gggtcagtcgacaatactaaaagtcatctg 246  Q
    |||||||||| |||| || |||||| ||||    
T  42515348 gggtcagtcggcaatgcttaaagtcgtctg 42515377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 22 - 231
Target Start/End: Original strand, 2189204 - 2189414
Alignment:
Q  22 gaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtacttgac 120  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||| |||||||||| ||||||||||||| ||||||    
T  2189204 gaaggcttataagaattgtttggcactacctatatcaacaagatgcatcttcttttcgatagctcatttcataagaactccacagttaagcgtgcttgac 2189303  T
Q  121 ttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggt 220  Q
    ||||||||||||||||||| |||||||||| | || ||| ||| ||||| || ||||||| | |||||||||||| || | || ||||| |||||||||     
T  2189304 ttggagcaattttgggatgagtgacctaccgggaagtttcccggtaagcgtgtgagtgaggacaaaacacgctgagaagactcgtgttgatttgtgggga 2189403  T
Q  221 cagtcgacaat 231  Q
    |||||| ||||    
T  2189404 cagtcggcaat 2189414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 58 - 231
Target Start/End: Complemental strand, 7646528 - 7646354
Alignment:
Q  58 aacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaa 156  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | ||     
T  7646528 aacaagatgcatcttcttttcggtagctcattccataagaacttcacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaag 7646429  T
Q  157 ttttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 231  Q
    |||  || ||||  |||||||||| | ||||||||||||||| | || |||||||||||||||||||||||||||    
T  7646428 tttctcggtaagtgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcgacaat 7646354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 21 - 231
Target Start/End: Original strand, 18833345 - 18833556
Alignment:
Q  21 ggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagcta-ttccataagaacttcacagttaagcgtacttga 119  Q
    |||| ||||| | ||||||||| ||||||||||||||||||||||||||||||||||||||||||| || |||||||||| |||||||||||||  ||||    
T  18833345 ggaaagcttatatgaattgtttagtactacctatatcaacaagatgcatcttcttttcggtagctaattacataagaactccacagttaagcgtgtttga 18833444  T
Q  120 cttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtgggg 219  Q
    ||| ||||||||||||||||||||||||||| | || ||| ||| ||| | |||||||||| | ||||||||||||||| | || ||||| ||||||||     
T  18833445 ctttgagcaattttgggatgggtgacctaccgggaagtttcccggtaaacgtgcgagtgaggacaaaacacgctgaaaagactcgtgttgatttgtggga 18833544  T
Q  220 tcagtcgacaat 231  Q
    | ||||| ||||    
T  18833545 taagtcggcaat 18833556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 46 - 231
Target Start/End: Complemental strand, 13122567 - 13122380
Alignment:
Q  46 actacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtga 144  Q
    ||||| ||||| |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||||| ||||||||||||||||||||||||    
T  13122567 actacatatattaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgatttggagcaattttgggatgggtga 13122468  T
Q  145 cctaccagaaaattttccgataagcatgcgagtga-gaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 231  Q
    |||||| | || ||| ||| ||||| ||||||||| ||  ||||||||||||||| | || |||||||||||||||||| ||| ||||    
T  13122467 cctaccgggaagtttcccggtaagcgtgcgagtgaggacaaaaacacgctgaaaagactcgtgttggtttgtggggtcaatcggcaat 13122380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 18 - 249
Target Start/End: Original strand, 679873 - 680104
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||||| ||||||  |||||||||||||| ||||||||||||| ||    
T  679873 gaaggaaggcttataagaattgtt-ggtactacctatatcaacaagatgcatattctttttggtagcccattccataagaactccacagttaagcgtgct 679971  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaa-taaaacacgctgaaaaaattcatgttggtttgt 215  Q
    |||||||||| | | || ||||||||||||| || | || |||  || ||| ||||||||||||||  ||||||||||||||| | ||||||||||||||    
T  679972 tgacttggagtagtctttggatgggtgacctgccgggaagtttcgcggtaaacatgcgagtgagaacaaaaacacgctgaaaagactcatgttggtttgt 680071  T
Q  216 ggggtcagtcgacaatactaaaagtcatctggga 249  Q
      |||||||| ||||| || |||||| |||||||    
T  680072 -aggtcagtctacaatgcttaaagtcgtctggga 680104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 18 - 231
Target Start/End: Complemental strand, 28495698 - 28495495
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    |||||||| |||| ||||||||||  ||  |||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||| ||    
T  28495698 gaaggaagacttataagaattgttgagttttacctatatcaacaagatgcatcttcttttaggtagctcattccataagaactccacagttaagcgtgct 28495599  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||||||||||||||||||||||||||||||| | |           |||| |||||||||| | ||||| ||||||||| | || ||||||||||||    
T  28495598 tgacttggagcaattttgggatgggtgacctaccggga-----------aagcgtgcgagtgaggacaaaacccgctgaaaagactcgtgttggtttgtg 28495510  T
Q  217 gggtcagtcgacaat 231  Q
    |||||||||| ||||    
T  28495509 gggtcagtcggcaat 28495495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 18 - 241
Target Start/End: Complemental strand, 22529325 - 22529101
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| ||||| |||||||||||| |||||| ||||||||||||||||||||| ||| || ||| || |||||||||||||||||||||  |    
T  22529325 gaaggaaggcttataagaaatgtttggtactatctatataaacaagatgcatcttcttttcagtaactcattacaaaagaacttcacagttaagcgtgtt 22529226  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttc-cgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgt 215  Q
    |||||||||| | | || |||||||||||||||  || || |||| || ||||| || ||||||| | |||| |||||||||| | ||||||||||||||    
T  22529225 tgacttggagtagtctttggatgggtgacctact-gagaagtttctcggtaagcgtgtgagtgaggacaaaatacgctgaaaagactcatgttggtttgt 22529127  T
Q  216 ggggtcagtcgacaatactaaaagtc 241  Q
     ||||||||||||||| || ||||||    
T  22529126 agggtcagtcgacaatgcttaaagtc 22529101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 24 - 249
Target Start/End: Complemental strand, 29039104 - 29038878
Alignment:
Q  24 aggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtag-ctattccataagaacttcacagttaagcgtacttgactt 122  Q
    ||||||| ||||||||||||||||||||||||||||||| |||||||||||||| | ||  | ||||||||||||||  ||| |||||||| ||||||||    
T  29039104 aggcttacaagaattgtttggtactacctatatcaacaacatgcatcttctttttgataatccattccataagaactctacatttaagcgtgcttgactt 29039005  T
Q  123 ggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtca 222  Q
    |||| | | || |||||| ||||||||| | || ||| ||| ||||| || || |||| | ||||||||||||||| | || ||||||||||| ||||||    
T  29039004 ggagtagtctttggatggatgacctaccggtaagtttcccggtaagcgtgtgactgaggacaaaacacgctgaaaagactcgtgttggtttgtagggtca 29038905  T
Q  223 gtcgacaatactaaaagtcatctggga 249  Q
    |||| |||| || |||||| |||||||    
T  29038904 gtcggcaatgcttaaagtcgtctggga 29038878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 23 - 154
Target Start/End: Original strand, 46425802 - 46425934
Alignment:
Q  23 aaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagc-tattccataagaacttcacagttaagcgtacttgact 121  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||||||||| |||||||    
T  46425802 aaggcttataagaattgtttggtattacctatatcaacaagatgcatcttcttttcggtatcttattccataagaactccacagttaagcgtgcttgact 46425901  T
Q  122 tggagcaattttgggatgggtgacctaccagaa 154  Q
    ||||| | | ||  |||||||||||||| ||||    
T  46425902 tggagtagtcttatgatgggtgacctacgagaa 46425934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 18 - 241
Target Start/End: Complemental strand, 2611742 - 2611525
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtag-ctattccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||||||| ||||| | |||| ||||||||| || |||||||||| ||    
T  2611742 gaaggaaggcttataagaattgtttggtactatctataacaacaagatgcatcttctttttggtagcccattctataagaactccatagttaagcgtgct 2611643  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    | |||||||| | | || |||||||||||||||| |  ||        ||||| |||||||||| | ||||||| ||||||| | || |||||||||||     
T  2611642 ttacttggagtagtctttggatgggtgacctaccgggtaa-------ctaagcgtgcgagtgaggacaaaacactctgaaaagactcgtgttggtttgta 2611550  T
Q  217 gggtcagtcgacaatactaaaagtc 241  Q
    ||||||||||||||| || ||||||    
T  2611549 gggtcagtcgacaatgcttaaagtc 2611525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 18 - 197
Target Start/End: Complemental strand, 35474211 - 35474031
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    |||| ||| |||| ||||||||||| ||||||| |||||||||||||||||||||||||| ||||||| |||||||||||||| |||||||||||||  |    
T  35474211 gaagaaagacttataagaattgtttagtactacttatatcaacaagatgcatcttctttttggtagctcattccataagaactccacagttaagcgtgtt 35474112  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaa 197  Q
    |||||||||| | | || ||||||||||| |||| | || |||  || ||||  |||||||||| | ||||||||||||||    
T  35474111 tgacttggagtagtctttggatgggtgacgtaccgggaattttctcggtaagtgtgcgagtgaggacaaaacacgctgaaa 35474031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 18 - 122
Target Start/End: Complemental strand, 6747688 - 6747583
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtag-ctattccataagaacttcacagttaagcgtact 116  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||| ||||||||||||| ||    
T  6747688 gaaggaaggattataagaattgtttggtactacctatatcaacaagatgcatcttctttttggtagcctattccataaaaactccacagttaagcgtgct 6747589  T
Q  117 tgactt 122  Q
    ||||||    
T  6747588 tgactt 6747583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 18 - 115
Target Start/End: Complemental strand, 11517479 - 11517381
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtac 115  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| | |||||||| ||||    
T  11517479 gaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatctacttttcggtagctcattccataagaactccgcagttaagagtac 11517381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 18 - 239
Target Start/End: Original strand, 25182417 - 25182639
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    |||||||| |||| |||||||||||||||||||||||||||||||||| |||||| ||||||||| || ||||||||||||||||||||||||| ||  |    
T  25182417 gaaggaagacttataagaattgtttggtactacctatatcaacaagatacatcttattttcggtaactcattccataagaacttcacagttaagtgtgtt 25182516  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||||||| | | || ||||||  ||||| |  | || |||  | | |||| | ||||||||   |||||||||| |||||| || | |||| |||||    
T  25182517 tgacttggagtagtctttggatggaggaccttctgggaagtttctcaaaaagcgttcgagtgagggcaaaacacgctaaaaaaactcgtattgggttgtg 25182616  T
Q  217 gggtcagtcgacaatactaaaag 239  Q
    |||||| |||| ||| |||||||    
T  25182617 gggtcaatcgaaaatcctaaaag 25182639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 18 - 216
Target Start/End: Complemental strand, 5406678 - 5406478
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||  ||| ||||||||||||||| ||||||||||||||||||||||||| |||| ||| ||  |  ||||||||||| ||||||||||||| ||    
T  5406678 gaaggaagatttataagaattgtttggtattacctatatcaacaagatgcatcttatttttggttgcccaaaccataagaactccacagttaagcgtgct 5406579  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccg-ataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgt 215  Q
    |||||| ||||||||||||||||| |||| | |  |||| ||||||| | || | |||||||||| | ||||||| ||||||| | || ||||||| |||    
T  5406578 tgactttgagcaattttgggatggatgactttctggaaagttttccgaaaaaacgtgcgagtgaggacaaaacacactgaaaacactcgtgttggtctgt 5406479  T
Q  216 g 216  Q
    |    
T  5406478 g 5406478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 22 - 149
Target Start/End: Complemental strand, 35527207 - 35527079
Alignment:
Q  22 gaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtag-ctattccataagaacttcacagttaagcgtacttgac 120  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||||| |||||||| |||| | |||||||| ||||| ||||||||||| | ||||||    
T  35527207 gaaggcttataagaattgtttggtgctacctatatcaacaagatgcatattcttttcagtagtccattccataggaactccacagttaagcatgcttgac 35527108  T
Q  121 ttggagcaattttgggatgggtgacctac 149  Q
    |||||| | | || | |||||||||||||    
T  35527107 ttggagtagtctttgcatgggtgacctac 35527079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 76 - 219
Target Start/End: Complemental strand, 43776322 - 43776178
Alignment:
Q  76 ttcggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcg 174  Q
    |||||||||| |||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||| |  | || ||||||  ||||| ||||    
T  43776322 ttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttggaatgggtgacctgcggggaagttttccagtaagcgtgcg 43776223  T
Q  175 agtgagaataaaacacgctgaaaaaattcatgttggtttgtgggg 219  Q
    | |||  | ||||||||||||||| | || |||||||||||||||    
T  43776222 aatgaagacaaaacacgctgaaaagactcgtgttggtttgtgggg 43776178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 35 - 147
Target Start/End: Original strand, 1628786 - 1628899
Alignment:
Q  35 aattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaatttt 133  Q
    ||||||||||||||| | |||||||||||||||||||||||||  | |||  || ||||||||||| || ||||||| ||| ||| ||||||||||||||    
T  1628786 aattgtttggtactatcgatatcaacaagatgcatcttcttttttgaagcccataccataagaactccatagttaagtgtatttggcttggagcaatttt 1628885  T
Q  134 gggatgggtgacct 147  Q
    ||||||||||||||    
T  1628886 gggatgggtgacct 1628899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 90 - 247
Target Start/End: Complemental strand, 3305365 - 3305208
Alignment:
Q  90 cataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaaca 189  Q
    ||||| |||||||||||||||||| ||||| |||||| | | || |||||||||||||||| |||| ||| | | ||||  |||||||||||| ||||||    
T  3305365 cataaaaacttcacagttaagcgtgcttgatttggagtagtctttggatgggtgacctaccggaaagtttcctggtaagagtgcgagtgagaacaaaaca 3305266  T
Q  190 cgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtcatctgg 247  Q
    ||||||||| | || ||||| ||||| || ||||||  ||||||| |||||| |||||    
T  3305265 cgctgaaaagactcgtgttgatttgtaggatcagtcagcaatacttaaagtcgtctgg 3305208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 222
Target Start/End: Complemental strand, 29357546 - 29357341
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtag-ctattccataagaacttcacagttaagcgtact 116  Q
    ||||||| | ||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||| |  || |||||||||| ||||||||| |||  |    
T  29357546 gaaggaatgtttataagaattgtttggtactaactatatcaacaagatgcatcttcttttcgatagcccgtttcataagaactacacagttaaccgtgtt 29357447  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||| ||| | | ||  ||||| |||||| || | || ||   ||| |||| |||||||||||| ||| |||| |||||| | || |||||||||||     
T  29357446 tgacttagagtagtcttaagatggatgaccttccggtaagttcctcgaaaagcgtgcgagtgagaacaaagcacgttgaaaagactcgtgttggtttgta 29357347  T
Q  217 gggtca 222  Q
    ||||||    
T  29357346 gggtca 29357341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 18 - 145
Target Start/End: Original strand, 20966107 - 20966235
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    |||||| | |||| ||||||| ||| ||| |||||||| |||||||||| || || |||||||||||| |||||||||||||||||||||||| | | |     
T  20966107 gaaggatgacttataagaattattttgtaatacctataccaacaagatgtatattattttcggtagctcattccataagaacttcacagttaaacatgca 20966206  T
Q  117 tgacttggagcaattttgggatgggtgac 145  Q
    ||||||| | |||||||||||||||||||    
T  20966207 tgacttgtatcaattttgggatgggtgac 20966235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 18 - 109
Target Start/End: Complemental strand, 36015501 - 36015409
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtag-ctattccataagaacttcacagttaa 109  Q
    ||||||| ||||||||||||||||||||||||| |||||||||||||||| |||||||||   ||| | ||||||||||||||||||||||||    
T  36015501 gaaggaaagcttaaaagaattgtttggtactacatatatcaacaagatgcctcttcttttaaatagcccattccataagaacttcacagttaa 36015409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 109
Target Start/End: Complemental strand, 26421395 - 26421303
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtag-ctattccataagaacttcacagttaa 109  Q
    |||||||| |||| |||||||| ||| ||||||||||||||||||||||||| || |||||||||| | |||||||||||||| |||||||||    
T  26421395 gaaggaagacttataagaattgcttgatactacctatatcaacaagatgcatatttttttcggtagtccattccataagaactccacagttaa 26421303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 113
Target Start/End: Complemental strand, 26421850 - 26421754
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtag-ctattccataagaacttcacagttaagcgt 113  Q
    |||| |||||| | |||||||||| |||||| |||||| |||||||||| |||||||||||||||| | |||||||||||||| |||||||||||||    
T  26421850 gaagtaaggctcataagaattgttaggtactccctataccaacaagatgaatcttcttttcggtagcccattccataagaactacacagttaagcgt 26421754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 27 - 145
Target Start/End: Original strand, 9623273 - 9623391
Alignment:
Q  27 cttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtacttgacttgga 125  Q
    |||| |||||||||||| ||| |||||||||||||||||||||||||||| |||||| | |||| ||||||||| |||||||||||||  ||||||||||    
T  9623273 cttataagaattgtttgataccacctatatcaacaagatgcatcttcttt-cggtagttcattctataagaactccacagttaagcgtgtttgacttgga 9623371  T
Q  126 gcaattttgggatgggtgac 145  Q
      | | || |||||||||||    
T  9623372 ctagtctttggatgggtgac 9623391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 146
Target Start/End: Original strand, 11372507 - 11372636
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| ||||||||||||||||||||| || ||||| ||||||| || |||| ||||||| |  ||||||||||| || ||||||||    |    
T  11372507 gaaggaaggcttataagaattgtttggtactacctgtaccaacatgatgcatgttatttttggtagctcaaaccataagaactccaaagttaagcacgtt 11372606  T
Q  117 tgacttggagcaattttgggatgggtgacc 146  Q
    ||||||  ||||||||||||||| ||||||    
T  11372607 tgacttatagcaattttgggatgagtgacc 11372636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 33 - 113
Target Start/End: Complemental strand, 31406659 - 31406578
Alignment:
Q  33 agaattgtttggtactacctatatcaacaagatgcatcttcttttcggtag-ctattccataagaacttcacagttaagcgt 113  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||||| |  || |||||||||| |||||||||||||    
T  31406659 agaattgtttggtgttacctatatcaacaagatgcatcttcttttcggtagcccgtttcataagaactccacagttaagcgt 31406578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 18 - 97
Target Start/End: Complemental strand, 31743914 - 31743834
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtag-ctattccataagaa 97  Q
    ||||||| ||||| |||||| ||||||| ||| ||||||||||||||||||||||||||||||||| | ||||||||||||    
T  31743914 gaaggaatgcttataagaatggtttggtgctatctatatcaacaagatgcatcttcttttcggtagcccattccataagaa 31743834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 19 - 83
Target Start/End: Original strand, 43233470 - 43233534
Alignment:
Q  19 aaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtag 83  Q
    ||||||| |||| |||||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  43233470 aaggaagacttataagaattgtttggtactatctatatcaacaagatgcatctttttttcggtag 43233534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 22 - 113
Target Start/End: Original strand, 16192379 - 16192471
Alignment:
Q  22 gaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtag-ctattccataagaacttcacagttaagcgt 113  Q
    ||||| ||| ||||||||||||||| |||||| ||||||||||||||||||| ||| ||||| | ||||||||||||||  ||||| ||||||    
T  16192379 gaaggattataagaattgtttggtattacctacatcaacaagatgcatcttcgttttggtagcccattccataagaactatacagtgaagcgt 16192471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 171 - 249
Target Start/End: Original strand, 36422592 - 36422670
Alignment:
Q  171 tgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtcatctggga 249  Q
    |||||||||| | ||||||| ||||||| | || ||||| ||||||||||||||||||||| |||||||| ||||||||    
T  36422592 tgcgagtgaggacaaaacacactgaaaagactcgtgttgatttgtggggtcagtcgacaatgctaaaagtaatctggga 36422670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 231
Target Start/End: Original strand, 43233153 - 43233227
Alignment:
Q  157 ttttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 231  Q
    ||||||| ||||| |||||||||| | ||||||||||||||| | || |||||||||||||||||||||| ||||    
T  43233153 ttttccggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaat 43233227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 26957643 - 26957603
Alignment:
Q  22 gaaggcttaaaagaattgtttggtactacctatatcaacaa 62  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  26957643 gaaggcttataagaattgtttggtactacctatatcaacaa 26957603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 171 - 246
Target Start/End: Complemental strand, 6748012 - 6747937
Alignment:
Q  171 tgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtcatctg 246  Q
    |||||||||| | ||||||||||||||| | || ||||||||||| |||||||||| |||| || |||||| ||||    
T  6748012 tgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtagggtcagtcggcaatgcttaaagtcgtctg 6747937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 113
Target Start/End: Complemental strand, 7461424 - 7461345
Alignment:
Q  34 gaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctattccataagaacttcacagttaagcgt 113  Q
    |||||||||| ||||| |||||| |||||||| ||||||||||| ||||| |  | ||||||||||  ||||||||||||    
T  7461424 gaattgtttgatactaactatataaacaagatacatcttctttttggtagttcattcataagaactctacagttaagcgt 7461345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 133
Target Start/End: Original strand, 37672233 - 37672332
Alignment:
Q  35 aattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaatttt 133  Q
    |||||||||||||||| | || |||||||||||| |||||||| | ||| | ||| |||||||| | |||||||||||||  ||||||| || |||||||    
T  37672233 aattgtttggtactacttgtaccaacaagatgcaacttctttttgttagttgatttcataagaaatacacagttaagcgtgtttgactttgaacaatttt 37672332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 139
Target Start/End: Original strand, 6585668 - 6585787
Alignment:
Q  22 gaaggcttaaaagaattgtttggtactacctatatcaac--aagatgcatcttcttttcggtagctattccataagaacttcacagttaagcgtacttga 119  Q
    |||| |||| || ||||||||||||||||||||||||||  ||||| ||||||| ||| |||||  |   ||||| ||||| | ||||||| || |||||    
T  6585668 gaagacttataaaaattgtttggtactacctatatcaacaaaagatacatcttccttttggtaggcaaaacataaaaactttatagttaagtgtgcttga 6585767  T
Q  120 cttggagcaattttgggatg 139  Q
    |||| ||||| ||| |||||    
T  6585768 cttgaagcaaatttaggatg 6585787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 249
Target Start/End: Complemental strand, 26419173 - 26419093
Alignment:
Q  169 catgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtcatctggga 249  Q
    |||| ||||||| | |||||| | |||||| | || ||||||||||||||||||||||||||| || ||| || |||||||    
T  26419173 catgtgagtgaggacaaaacatgttgaaaagactcgtgttggtttgtggggtcagtcgacaatcctgaaattcctctggga 26419093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 231
Target Start/End: Complemental strand, 7461318 - 7461258
Alignment:
Q  171 tgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 231  Q
    |||||||||  ||||||||||||||||| | || ||||| |||||||| ||| ||||||||    
T  7461318 tgcgagtgaagataaaacacgctgaaaagactcgtgttgatttgtgggatcaatcgacaat 7461258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 239
Target Start/End: Original strand, 33316943 - 33316979
Alignment:
Q  203 catgttggtttgtggggtcagtcgacaatactaaaag 239  Q
    |||||||||||||| |||||||||||||| |||||||    
T  33316943 catgttggtttgtgaggtcagtcgacaatcctaaaag 33316979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 147; Significance: 2e-77; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 18 - 231
Target Start/End: Complemental strand, 20054626 - 20054412
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||    
T  20054626 gaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgct 20054527  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||||||||||||||||||||||||||||||| | || ||| ||| ||||| |||||||||| | ||||||||||||||| | || ||||||||||||    
T  20054526 tgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtg 20054427  T
Q  217 gggtcagtcgacaat 231  Q
    |||||||||| ||||    
T  20054426 gggtcagtcggcaat 20054412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 18 - 231
Target Start/End: Complemental strand, 20055082 - 20054868
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||    
T  20055082 gaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgct 20054983  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||||||||||||||||||||||||||||||| | || ||| ||| ||||| |||||||||| | ||||||||||||||| | || ||||||||||||    
T  20054982 tgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtg 20054883  T
Q  217 gggtcagtcgacaat 231  Q
    |||||||||| ||||    
T  20054882 gggtcagtcggcaat 20054868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 18 - 231
Target Start/End: Complemental strand, 20055538 - 20055324
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||    
T  20055538 gaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgct 20055439  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||||||||||||||||||||||||||||||| | || ||| ||| ||||| |||||||||| | ||||||||||||||| | || ||||||||||||    
T  20055438 tgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtg 20055339  T
Q  217 gggtcagtcgacaat 231  Q
    |||||||||| ||||    
T  20055338 gggtcagtcggcaat 20055324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 18 - 231
Target Start/End: Complemental strand, 20055994 - 20055780
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||    
T  20055994 gaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgct 20055895  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||||||||||||||||||||||||||||||| | || ||| ||| ||||| |||||||||| | ||||||||||||||| | || ||||||||||||    
T  20055894 tgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtg 20055795  T
Q  217 gggtcagtcgacaat 231  Q
    |||||||||| ||||    
T  20055794 gggtcagtcggcaat 20055780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 18 - 231
Target Start/End: Complemental strand, 20056450 - 20056236
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||    
T  20056450 gaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgct 20056351  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||||||||||||||||||||||||||||||| | || ||| ||| ||||| |||||||||| | ||||||||||||||| | || ||||||||||||    
T  20056350 tgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtg 20056251  T
Q  217 gggtcagtcgacaat 231  Q
    |||||||||| ||||    
T  20056250 gggtcagtcggcaat 20056236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 18 - 231
Target Start/End: Complemental strand, 20057353 - 20057139
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||    
T  20057353 gaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgct 20057254  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||||||||||||||||||||||||||||||| | || ||| ||| ||||| |||||||||| | ||||||||||||||| | || ||||||||||||    
T  20057253 tgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtg 20057154  T
Q  217 gggtcagtcgacaat 231  Q
    |||||||||| ||||    
T  20057153 gggtcagtcggcaat 20057139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 18 - 231
Target Start/End: Complemental strand, 20054170 - 20053956
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||    
T  20054170 gaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgct 20054071  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    ||||| |||||||||||||||||||||||||||| | || ||||| | ||||| |||||||||| | |||||| |||||||| | || ||||||||||||    
T  20054070 tgactaggagcaattttgggatgggtgacctaccgggaagttttctggtaagcgtgcgagtgaggacaaaacatgctgaaaagactcgtgttggtttgtg 20053971  T
Q  217 gggtcagtcgacaat 231  Q
    |||||||||||||||    
T  20053970 gggtcagtcgacaat 20053956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 22 - 231
Target Start/End: Complemental strand, 20057805 - 20057595
Alignment:
Q  22 gaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtacttgac 120  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||||||    
T  20057805 gaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgac 20057706  T
Q  121 ttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggt 220  Q
    |||||||||||||||||||||||||||||| | || ||| ||| ||||| |||||||||| | ||||||||||||||| | || ||||||||||||||||    
T  20057705 ttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggt 20057606  T
Q  221 cagtcgacaat 231  Q
    |||||| ||||    
T  20057605 cagtcggcaat 20057595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 18 - 231
Target Start/End: Complemental strand, 20056906 - 20056692
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||  |    
T  20056906 gaaggaaggcttatgagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgtt 20056807  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||||||||||||||||||||||||||||||| | || ||| ||| ||||| |||||||||| | ||||||||||||||| | || ||||||||||||    
T  20056806 tgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtg 20056707  T
Q  217 gggtcagtcgacaat 231  Q
    |||||||||| ||||    
T  20056706 gggtcagtcggcaat 20056692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 18 - 231
Target Start/End: Complemental strand, 20845751 - 20845537
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||    
T  20845751 gaaggaaggcttataagaattgtttgttactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgct 20845652  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||||||| ||||||||||||||||||||||| | || ||| ||| ||||| |||||||||| | ||||||||||||||| | || ||||||||||||    
T  20845651 tgacttggagaaattttgggatgggtgacctaccgggaagtttcccggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtg 20845552  T
Q  217 gggtcagtcgacaat 231  Q
    |||||||||| ||||    
T  20845551 gggtcagtcggcaat 20845537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 18 - 231
Target Start/End: Complemental strand, 16452023 - 16451809
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| ||||||||||||| ||    
T  16452023 gaaggaaagcttataagaattgttgggtactacctatatcaacaagatgcatcttcttttcggtagttcattccataagaactccacagttaagcgtgct 16451924  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||||||||||||||||||||||||||||||| |||| |||||| |||||| |||| ||||  | ||||||||||||||| | || ||||||||||||    
T  16451923 tgacttggagcaattttgggatgggtgacctaccggaaagttttccaataagcgtgcgcgtgatgacaaaacacgctgaaaagactcgtgttggtttgtg 16451824  T
Q  217 gggtcagtcgacaat 231  Q
    |||||||||| ||||    
T  16451823 gggtcagtcggcaat 16451809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 18 - 231
Target Start/End: Complemental strand, 16461176 - 16460962
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| ||||||||||||| ||    
T  16461176 gaaggaaagcttataagaattgttgggtactacctatatcaacaagatgcatcttcttttcggtagttcattccataagaactccacagttaagcgtgct 16461077  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||||||||||||||||||||||||||||||| |||| |||||| |||||| |||| ||||  | ||||||||||||||| | || ||||||||||||    
T  16461076 tgacttggagcaattttgggatgggtgacctaccggaaagttttccaataagcgtgcgcgtgatgacaaaacacgctgaaaagactcgtgttggtttgtg 16460977  T
Q  217 gggtcagtcgacaat 231  Q
    |||||||||| ||||    
T  16460976 gggtcagtcggcaat 16460962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 18 - 231
Target Start/End: Original strand, 38340962 - 38341176
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||    
T  38340962 gaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcatttcggtagctcattccataagaacttcacagttaagcgtgct 38341061  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||||||||||||||||||||||||||||||  | || ||| ||| ||||| |||||||||| | ||||||||| ||||| | || ||||||||| ||    
T  38341062 tgacttggagcaattttgggatgggtgacctactgggaagtttcccggtaagcgtgcgagtgaggacaaaacacgcggaaaagactcgtgttggtttatg 38341161  T
Q  217 gggtcagtcgacaat 231  Q
    |||||||||| ||||    
T  38341162 gggtcagtcggcaat 38341176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 18 - 231
Target Start/End: Original strand, 52250262 - 52250476
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||    
T  52250262 gaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgct 52250361  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    ||||||| ||||||||||| |||||||||||||| | || ||| ||| ||||  |||||||||| | ||||||||||||||| | || ||||||||||||    
T  52250362 tgacttgaagcaattttggaatgggtgacctaccgggaagtttcccggtaagtgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtg 52250461  T
Q  217 gggtcagtcgacaat 231  Q
    |||||||||||||||    
T  52250462 gggtcagtcgacaat 52250476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 18 - 231
Target Start/End: Complemental strand, 20060430 - 20060216
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| || ||    
T  20060430 gaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagtgtgct 20060331  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    ||||||||| |||||||||||||||||||||||| | || ||||||| ||||| |||||||||| | |||||||| || ||| | || ||||||||||||    
T  20060330 tgacttggatcaattttgggatgggtgacctaccgggaagttttccggtaagcgtgcgagtgaggacaaaacacgatggaaagactcgtgttggtttgtg 20060231  T
Q  217 gggtcagtcgacaat 231  Q
    |||||||||| ||||    
T  20060230 gggtcagtcggcaat 20060216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 18 - 231
Target Start/End: Complemental strand, 46693825 - 46693611
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||| |||| ||||||||||||| ||    
T  46693825 gaaggaaggcttataaaaattgtttggtactacctatatcaacaagatgcatcttcttttcggtatctcatttcataataactccacagttaagcgtgct 46693726  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||||||||||||||||||||||||||||||| |||| ||| ||| || || |||||||||| | ||||||||||||||| |  | ||||||||||||    
T  46693725 tgacttggagcaattttgggatgggtgacctaccggaaagtttcccggtatgcgtgcgagtgaggacaaaacacgctgaaaagacccgtgttggtttgtg 46693626  T
Q  217 gggtcagtcgacaat 231  Q
    |||||||||||||||    
T  46693625 gggtcagtcgacaat 46693611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 18 - 241
Target Start/End: Complemental strand, 50002797 - 50002573
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||| || ||||||||||  |    
T  50002797 gaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattctttaagaactccatagttaagcgtgtt 50002698  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||||||||||||||||||||| ||||||||| | || ||  ||| ||||| |||||||||| | ||||||||||||||| | || ||||||||||||    
T  50002697 tgacttggagcaattttgggatggatgacctaccgggaagttccccggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtg 50002598  T
Q  217 gggtcagtcgacaatactaaaagtc 241  Q
    ||||||||||||||| || ||||||    
T  50002597 gggtcagtcgacaatcctgaaagtc 50002573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 18 - 231
Target Start/End: Complemental strand, 35759698 - 35759484
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||| ||    
T  35759698 gaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaacttcatagttaaacgtgct 35759599  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    ||||||||||| |||||||||| ||||||||||| | || |||| || ||||| |||||||||| | ||||||||||||||| | || ||||||||| ||    
T  35759598 tgacttggagctattttgggattggtgacctaccgggaagtttttcggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttttg 35759499  T
Q  217 gggtcagtcgacaat 231  Q
    |||||||||| ||||    
T  35759498 gggtcagtcggcaat 35759484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 35 - 225
Target Start/End: Complemental strand, 50003148 - 50002957
Alignment:
Q  35 aattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaatttt 133  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||| |||||| ||||||||||||||||||||| |||||||||||||||||||    
T  50003148 aattgttgggtactacctatatcaacaagatgcatcttcttttcagtagctcattccaaaagaacttcacagttaagcgtgcttgacttggagcaatttt 50003049  T
Q  134 gggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtc 225  Q
     |||||||||||||||| | || ||| ||| ||||| |||||||||| | ||||||||||||||| | || |||||||||||||||||||||    
T  50003048 tggatgggtgacctaccgggaagtttcccggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtc 50002957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 18 - 231
Target Start/End: Complemental strand, 51372964 - 51372750
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| ||||||||||| |||||||||||||| |||||||||||||| |||||||||||| |||||||||||||| ||||||||||||| ||    
T  51372964 gaaggaaggcttataagaattgtttagtactacctatatcgacaagatgcatcttattttcggtagctcattccataagaactccacagttaagcgtgct 51372865  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||| ||||||||||||||||||||||||| ||| || |||| || ||||| |||||||||| | ||||  ||||||||| | || ||||||||||||    
T  51372864 tgactttgagcaattttgggatgggtgacctatcaggaagtttttcggtaagcgtgcgagtgaggacaaaatccgctgaaaagactcgtgttggtttgtg 51372765  T
Q  217 gggtcagtcgacaat 231  Q
    |||||| ||| ||||    
T  51372764 gggtcaatcggcaat 51372750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 18 - 231
Target Start/End: Complemental strand, 43057155 - 43056941
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtag-ctattccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| | |||||||||||||| |||||||||||||  |    
T  43057155 gaaggaaggcttagaagaattgtttgatactacctatatcaacaagatgcatcttcttttcggtagcccattccataagaactccacagttaagcgtgat 43057056  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||| |||   | || |||||||||||||||  | || ||| ||| |||||||||||||||| | ||||||| ||||||||| |  |||||||||||     
T  43057055 tgacttagagtggtctttggatgggtgacctactgggaagtttcccggtaagcatgcgagtgaggacaaaacacactgaaaaaacttgtgttggtttgta 43056956  T
Q  217 gggtcagtcgacaat 231  Q
    |||||||||| ||||    
T  43056955 gggtcagtcggcaat 43056941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 60 - 231
Target Start/End: Original strand, 52250641 - 52250813
Alignment:
Q  60 caagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaatt 158  Q
    |||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||||||||| |||||||||||||||||||||||||| | || ||    
T  52250641 caagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttgaagcaattttgggatgggtgacctaccgggaagtt 52250740  T
Q  159 ttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 231  Q
    | ||| ||||  |||||||||  | ||||||||||||||| | || |||||||||||||||||||||||||||    
T  52250741 tcccggtaagtgtgcgagtgaagacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcgacaat 52250813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 60 - 231
Target Start/End: Original strand, 52250978 - 52251150
Alignment:
Q  60 caagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaatt 158  Q
    |||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||||||||| |||||||||||||||||||||||||| | || ||    
T  52250978 caagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttgaagcaattttgggatgggtgacctaccgggaagtt 52251077  T
Q  159 ttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 231  Q
    | ||| ||||  |||||||||  | ||||||||||||||| | || |||||||||||||||||||||||||||    
T  52251078 tcccggtaagtgtgcgagtgaagacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcgacaat 52251150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 18 - 146
Target Start/End: Complemental strand, 50002375 - 50002246
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||||||| || || ||    
T  50002375 gaaggaaggcttataagaattgtttggtactacctttatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttgagtgtgct 50002276  T
Q  117 tgacttggagcaattttgggatgggtgacc 146  Q
    |||||||||||||||||||||| |||||||    
T  50002275 tgacttggagcaattttgggattggtgacc 50002246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 18 - 215
Target Start/End: Complemental strand, 43057613 - 43057415
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtag-ctattccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||||||||||||| |||||||||||||  |    
T  43057613 gaaggaaggcttataagaattgtttggtactacctatattaacaagatgcatcttcttttcggtagcccattccataagaactccacagttaagcgtgat 43057514  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgt 215  Q
    ||||||||||   | || |||| ||||||||||  | || ||| ||| |||||||| ||||||||| |||||||||| |||| | |  |||||||||||    
T  43057513 tgacttggagtggtctttggatcggtgacctactgggaagtttcccggtaagcatgtgagtgagaacaaaacacgctaaaaagacttgtgttggtttgt 43057415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 18 - 148
Target Start/End: Complemental strand, 35761004 - 35760873
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||| |  |||||||||| ||    
T  35761004 gaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctttttggtagctcattccatgagaactccgtagttaagcgtgct 35760905  T
Q  117 tgacttggagcaattttgggatgggtgaccta 148  Q
    |||||||||||||||||||||||||| |||||    
T  35760904 tgacttggagcaattttgggatgggtaaccta 35760873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 20061281 - 20061188
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaag 110  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  20061281 gaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaag 20061188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 22 - 147
Target Start/End: Original strand, 16907294 - 16907420
Alignment:
Q  22 gaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtag-ctattccataagaacttcacagttaagcgtacttgac 120  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| || | | |||| | ||||||| || ||||||||||  |||||    
T  16907294 gaaggcttataagaattgtttggtactacctatatcaacaagatacatcttcttttcagtggtccattctacaagaactccatagttaagcgtgtttgac 16907393  T
Q  121 ttggagcaattttgggatgggtgacct 147  Q
    |||||||||||||| ||||||||||||    
T  16907394 ttggagcaattttgagatgggtgacct 16907420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 226
Target Start/End: Original strand, 23180786 - 23180995
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtag-ctattccataagaacttcacagttaagcgtact 116  Q
    ||||||| | ||| |||||||| |||||||||||||||||||||||||| ||||||| |||| ||| | |||||||||||| | |||| |||||||| ||    
T  23180786 gaaggaatgattataagaattgcttggtactacctatatcaacaagatgtatcttctattcgctagcccattccataagaattccacaattaagcgtgct 23180885  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||||||| ||||||||||||||| |||| |  |||| |||| | | ||   |||||||||  | |||||| |||||||| | | ||||||||||||     
T  23180886 tgacttggagaaattttgggatgggttaccttctggaaagtttttcaaaaaatgtgcgagtgacgacaaaacatgctgaaaagactaatgttggtttgtc 23180985  T
Q  217 gggtcagtcg 226  Q
    |||| |||||    
T  23180986 gggttagtcg 23180995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 18 - 149
Target Start/End: Complemental strand, 31822753 - 31822621
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||  ||| ||||||| ||||||||||| ||||||||||| |||||||||||||||||||||| | |||| ||||||| |||||||||||||  |    
T  31822753 gaaggaagatttataagaattatttggtactacatatatcaacaatatgcatcttcttttcggtagctcaatccaaaagaactccacagttaagcgtttt 31822654  T
Q  117 tgacttggagcaattttgggatgggtgacctac 149  Q
    ||||||||| ||||||||||||||  |||||||    
T  31822653 tgacttggaacaattttgggatggacgacctac 31822621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 19 - 225
Target Start/End: Original strand, 2634523 - 2634730
Alignment:
Q  19 aaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtag-ctattccataagaacttcacagttaagcgtactt 117  Q
    |||||||||||  |||||||||||||||||| |||||  |||||||||||||||||||||| ||| |||||| ||||||||||||| ||||| ||| |||    
T  2634523 aaggaaggcttgcaagaattgtttggtactagctatacaaacaagatgcatcttcttttcgatagtctattcaataagaacttcactgttaaacgtgctt 2634622  T
Q  118 gacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtgg 217  Q
    ||||||||| | | || |||||| |||| | |  | || |||||| | |||||||||| |||| || || ||||||||||| | || |||| ||||||      
T  2634623 gacttggagtagtctttggatggatgacattctgggaagttttccaaaaagcatgcgaatgaggatgaagcacgctgaaaagactcttgtttgtttgtaa 2634722  T
Q  218 ggtcagtc 225  Q
    ||||||||    
T  2634723 ggtcagtc 2634730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 32 - 146
Target Start/End: Original strand, 2634994 - 2635109
Alignment:
Q  32 aagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaat 130  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| ||||||||| |||||||||||||  ||| ||||||| |||    
T  2634994 aagaattgtttggtactacctataccaacaagatgcatcttcttttcggtagctcattcaataagaactccacagttaagcgtgtttggcttggagtaat 2635093  T
Q  131 tttgggatgggtgacc 146  Q
     || ||||| ||||||    
T  2635094 ctttggatgagtgacc 2635109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 18 - 126
Target Start/End: Original strand, 12728047 - 12728157
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggt-actacctatatcaacaagatgcatcttcttttcggtagc-tattccataagaacttcacagttaagcgtac 115  Q
    |||||||| |||| |||||||||||||| ||| |||||||||||||||||||||||||||||||||||  |||||||||||||| ||||||||||| | |    
T  12728047 gaaggaagacttataagaattgtttggttactgcctatatcaacaagatgcatcttcttttcggtagcacattccataagaactccacagttaagcatgc 12728146  T
Q  116 ttgacttggag 126  Q
    |||||||||||    
T  12728147 ttgacttggag 12728157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 109
Target Start/End: Original strand, 2328371 - 2328463
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagc-tattccataagaacttcacagttaa 109  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| ||||||  |||||||||||||| |||||||||    
T  2328371 gaaggaaggcttataagaattgtttggtactacctatattaacaagatgcatcttctttttggtagcacattccataagaactccacagttaa 2328463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 149
Target Start/End: Original strand, 12883580 - 12883712
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    |||||||  |||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||| |||| |||||||||| ||  |    
T  12883580 gaaggaatacttataagaattgtttggtactacctatatcaacaagatgcattttctttttggtagctcattccataaaaactccacagttaagtgtgtt 12883679  T
Q  117 tgacttggagcaattttgggatgggtgacctac 149  Q
    ||||||| || | |||| |||||| ||||||||    
T  12883680 tgacttgaagtagtttttggatggatgacctac 12883712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 18 - 230
Target Start/End: Complemental strand, 30873040 - 30872824
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtag-ctattccataagaacttcacagttaagcgtact 116  Q
    |||||||| |||  |||||||||||| ||||||||||||||||||||||||||||||||| ||||| | |||| ||||||||| |||| |||||| | ||    
T  30873040 gaaggaagacttttaagaattgtttgatactacctatatcaacaagatgcatcttctttttggtagtccattctataagaactccacaattaagcatgct 30872941  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttc-cgataagcatg---cgagtgagaataaaacacgctgaaaaaattcatgttggtt 212  Q
    ||||||| || | | || |||||||||||||| | ||||| |||| ||| ||  |||   |||||||| | |||||| | |||||| |||||||||  ||    
T  30872940 tgacttgcagtagtctttggatgggtgaccta-ctgaaaagtttcacgaaaaatatgtgacgagtgaggacaaaacatgttgaaaagattcatgttaatt 30872842  T
Q  213 tgtggggtcagtcgacaa 230  Q
    ||| ||||||||||||||    
T  30872841 tgtagggtcagtcgacaa 30872824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 19 - 150
Target Start/End: Original strand, 7548148 - 7548280
Alignment:
Q  19 aaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtag-ctattccataagaacttcacagttaagcgtactt 117  Q
    ||||||| |||| || |||||||||||| || ||||||||||||||||||| ||||||| ||||| | |||  ||||||||| |||| ||||||||||||    
T  7548148 aaggaagacttataaaaattgtttggtattaactatatcaacaagatgcatattctttttggtagcccatttgataagaactccacaattaagcgtactt 7548247  T
Q  118 gacttggagcaattttgggatgggtgacctacc 150  Q
    ||||||||| | | || ||||||||||||||||    
T  7548248 gacttggagtagtctttggatgggtgacctacc 7548280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 44 - 231
Target Start/End: Complemental strand, 7230007 - 7229819
Alignment:
Q  44 gtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggt 142  Q
    |||||| ||||||||||| || |||||||| ||||||||| | ||| |||||||||| || || ||||| |  |||||||||||||||||| |||| |||    
T  7230007 gtactaactatatcaacacgaagcatcttcatttcggtagttcattacataagaactccatagataagcatgtttgacttggagcaattttaggattggt 7229908  T
Q  143 gacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 231  Q
    |||||   | ||| |||| ||| |||| ||  |||||| |||||||| |||||||||| || ||||| |||||||||| ||||| ||||    
T  7229907 gaccttatataaagtttttcgaaaagcgtgaaagtgaggataaaacatgctgaaaaaactcgtgttgctttgtggggtgagtcgtcaat 7229819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 18 - 139
Target Start/End: Complemental strand, 16410813 - 16410691
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtag-ctattccataagaacttcacagttaagcgtact 116  Q
    ||||||| ||||| ||||||| |||  ||||||| ||| |||||||||||||||| |||| ||||| |||||| | |||||||||| |||||| | |  |    
T  16410813 gaaggaaagcttataagaattatttactactaccaataccaacaagatgcatcttgtttttggtagcctattctagaagaacttcaaagttaaacatgtt 16410714  T
Q  117 tgacttggagcaattttgggatg 139  Q
    ||||||||||||| |||||||||    
T  16410713 tgacttggagcaagtttgggatg 16410691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 18 - 139
Target Start/End: Complemental strand, 16440669 - 16440547
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    |||| ||| |||| ||||| |||||| ||||||| ||| ||||||||||||| ||||||| ||||||| |||| |||| ||||||| ||||||| ||  |    
T  16440669 gaagaaagacttataagaactgtttgctactaccgataacaacaagatgcatattctttttggtagctcattctataataacttcaaagttaagtgtgat 16440570  T
Q  117 tgacttggagcaattttgggatg 139  Q
    ||||| | |||||||||||||||    
T  16440569 tgactcgaagcaattttgggatg 16440547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 114 - 231
Target Start/End: Original strand, 7547790 - 7547907
Alignment:
Q  114 acttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggttt 213  Q
    ||||||||||||| | | || |||||||||||||||| |||| |||| |||||||| ||||||| || | ||||||| |||||||   || ||||| |||    
T  7547790 acttgacttggagtagtgtttggatgggtgacctaccggaaagtttttcgataagcgtgcgagtaaggacaaaacacactgaaaagtctcgtgttgattt 7547889  T
Q  214 gtggggtcagtcgacaat 231  Q
    || |||||||||||||||    
T  7547890 gtagggtcagtcgacaat 7547907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 125
Target Start/End: Original strand, 10820648 - 10820758
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatc--ttcttttcggtagct-attccataagaacttcacagttaagcgta 114  Q
    ||||||||  ||| |||||||||||||||||||||||||||| ||||| ||||  || |||||| |  || ||| |||||||| |||||||||||||||     
T  10820648 gaaggaagatttataagaattgtttggtactacctatatcaataagatacatctttttttttcgatgactcatttcataagaaattcacagttaagcgtg 10820747  T
Q  115 cttgacttgga 125  Q
    |||||||||||    
T  10820748 cttgacttgga 10820758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 27 - 147
Target Start/End: Original strand, 2739587 - 2739708
Alignment:
Q  27 cttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtag-ctattccataagaacttcacagttaagcgtacttgacttgga 125  Q
    |||| ||||||||||| | ||||| ||||||||||| ||| ||||||||||   ||| |||||||||||||||||||  |||||| ||  ||||||| ||    
T  2739587 cttataagaattgtttagcactacatatatcaacaatatgtatcttcttttttatagtctattccataagaacttcatggttaagtgtgtttgactttga 2739686  T
Q  126 gcaattttgggatgggtgacct 147  Q
    |||||||||  |||| ||||||    
T  2739687 gcaattttgatatggatgacct 2739708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 86 - 249
Target Start/End: Complemental strand, 35010017 - 35009866
Alignment:
Q  86 attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataa 185  Q
    |||||||||||||| ||| ||||||||| |||||||||||| | | || |||||||||||||||| || ||||||||          || ||||| | ||    
T  35010017 attccataagaactccacggttaagcgtgcttgacttggagtagtctttggatgggtgacctacc-gagaattttcc----------cg-gtgaggacaa 35009930  T
Q  186 aacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtcatctggga 249  Q
    ||||| ||||||||| ||||||| |||||| |||||||||| |||| || |||||| |||||||    
T  35009929 aacacactgaaaaaactcatgttcgtttgtagggtcagtcggcaatgctcaaagtcgtctggga 35009866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 94
Target Start/End: Complemental strand, 31823160 - 31823097
Alignment:
Q  32 aagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataa 94  Q
    ||||||| |||||||||||||||||||| || |||||||||||||| ||||||| |||||||||    
T  31823160 aagaattatttggtactacctatatcaataaaatgcatcttctttttggtagctcattccataa 31823097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 101 - 147
Target Start/End: Original strand, 8278097 - 8278143
Alignment:
Q  101 cacagttaagcgtacttgacttggagcaattttgggatgggtgacct 147  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||    
T  8278097 cacagttaagcgtgcttgacttgaagcaattttgggatgggtgacct 8278143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 133 - 225
Target Start/End: Complemental strand, 31823093 - 31823001
Alignment:
Q  133 tgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtc 225  Q
    |||||||||||||||||  | || |||  || |||||||||||||||| | |||||| |||||||| | || ||||| |||||||||||||||    
T  31823093 tgggatgggtgacctactgggaagtttctcggtaagcatgcgagtgaggacaaaacatgctgaaaagactcgtgttgatttgtggggtcagtc 31823001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 239
Target Start/End: Complemental strand, 49996613 - 49996548
Alignment:
Q  174 gagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaag 239  Q
    ||||||| | ||||||||||||||| | || |||| ||||||||||||||||| |||| |||||||    
T  49996613 gagtgaggacaaaacacgctgaaaagactcttgttagtttgtggggtcagtcggcaatcctaaaag 49996548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 231
Target Start/End: Complemental strand, 35760000 - 35759940
Alignment:
Q  171 tgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 231  Q
    |||||| ||| | ||||||||||||||| | || |||||||||||||||||||||| ||||    
T  35760000 tgcgagcgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaat 35759940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 69
Target Start/End: Complemental strand, 46411210 - 46411173
Alignment:
Q  32 aagaattgtttggtactacctatatcaacaagatgcat 69  Q
    ||||||| |||||||||||||||||||| |||||||||    
T  46411210 aagaattatttggtactacctatatcaataagatgcat 46411173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 135
Target Start/End: Complemental strand, 843009 - 842905
Alignment:
Q  32 aagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctattc-cataagaacttcacagttaagcgtacttgacttggagcaat 130  Q
    |||||||||||||||||| | ||  ||||||||||||| ||||||| | ||| |  || ||||||||||  |||||| | ||| |||||||| || ||||    
T  843009 aagaattgtttggtactatccattccaacaagatgcatgttctttttgatagatcgtcacataagaactcaacagttgaacgtgcttgactttgaacaat 842910  T
Q  131 tttgg 135  Q
    |||||    
T  842909 tttgg 842905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 125
Target Start/End: Original strand, 42317730 - 42317818
Alignment:
Q  37 ttgtttggtactacctatatcaacaagatgcatcttcttttcggtagctattccataagaacttcacagttaagcgtacttgacttgga 125  Q
    ||||||| || || |||||||||||||||||||||| |||||    || ||||| ||  ||||||| | |||||||| |||||||||||    
T  42317730 ttgtttgatattatctatatcaacaagatgcatcttattttcacaggcaattccttattaacttcataattaagcgtgcttgacttgga 42317818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 145; Significance: 2e-76; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 18 - 249
Target Start/End: Complemental strand, 2300 - 2068
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  | |||||||||| ||    
T  2300 gaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagcttattccataagaactcaatagttaagcgtgct 2201  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||||||||||||||||||||||||||||||| | || ||||||| ||||| |||||||||| | |||||||  |||||| | || ||||||||||||    
T  2200 tgacttggagcaattttgggatgggtgacctaccgggaagttttccggtaagcgtgcgagtgaggacaaaacacattgaaaagactcgtgttggtttgtg 2101  T
Q  217 gggtcagtcgacaatactaaaagtcatctggga 249  Q
    ||||||||||||||| ||||||||  |||||||    
T  2100 gggtcagtcgacaatcctaaaagttgtctggga 2068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 143; Significance: 4e-75; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 18 - 231
Target Start/End: Original strand, 1276 - 1490
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||    
T  1276 gaaggaaggcttataagaattgtttggtactacctatataaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgct 1375  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||||||||||||||||||||||||||||||| | || ||| ||| ||||| |||||||||| | ||||||||||||||| | || ||||||||||||    
T  1376 tgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtg 1475  T
Q  217 gggtcagtcgacaat 231  Q
    | |||||||||||||    
T  1476 gcgtcagtcgacaat 1490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 141; Significance: 6e-74; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 18 - 249
Target Start/End: Complemental strand, 10844705 - 10844473
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| |||| |||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||    
T  10844705 gaaggaaggcttataagagttgtttggtactacctatattaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgct 10844606  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    ||||||| |||||||||||||||||||||||||| | || |||  || |||||||||||||||| | ||||||||||||||| | || |||| ||||||     
T  10844605 tgacttgaagcaattttgggatgggtgacctaccgggaagtttctcggtaagcatgcgagtgaggacaaaacacgctgaaaagactcgtgtttgtttgta 10844506  T
Q  217 gggtcagtcgacaatactaaaagtcatctggga 249  Q
    ||||||||||||||| ||||||||| |||||||    
T  10844505 gggtcagtcgacaatcctaaaagtcgtctggga 10844473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 18 - 249
Target Start/End: Original strand, 17103137 - 17103370
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    |||||||| |||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||||| |||||||||||||| ||| ||||||||| ||    
T  17103137 gaaggaagacttataagaattgtttggtactgcctatatcaacaagctgcatcttcttttcggtagctcattccataagaactccacggttaagcgtgct 17103236  T
Q  117 tgacttggagcaattttgggatgggt-gacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgt 215  Q
    |||||||||||||||||||||||||| |||||||| | || ||| ||| ||||| |||||||||| | ||||||||||||||| | || |||||||||||    
T  17103237 tgacttggagcaattttgggatgggttgacctaccgggaagtttcccggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgt 17103336  T
Q  216 ggggtcagtcgacaatactaaaagtcatctggga 249  Q
    |||||||||||||||| ||||||||| |||||||    
T  17103337 ggggtcagtcgacaatcctaaaagtcgtctggga 17103370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 18 - 231
Target Start/End: Complemental strand, 22549085 - 22548871
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    |||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||||||||| ||    
T  22549085 gaaggaagacttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataaaaactccacagttaagcgtgct 22548986  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||||||||||||||||||||||||||||||| | || ||| ||  ||||| |||||||||| ||||||||||||||| | | || ||||||||||||    
T  22548985 tgacttggagcaattttgggatgggtgacctaccgggaagtttcccagtaagcgtgcgagtgaggataaaacacgctgaacagactcgtgttggtttgtg 22548886  T
Q  217 gggtcagtcgacaat 231  Q
    |||||||||| ||||    
T  22548885 gggtcagtcggcaat 22548871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 18 - 231
Target Start/End: Complemental strand, 12827344 - 12827130
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||    
T  12827344 gaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgct 12827245  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||||||||||||||||||||||||||||||| | || ||| ||| ||||  ||||||||||  ||||||||  | |||| | || ||||||||||||    
T  12827244 tgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagtgtgcgagtgaggttaaaacacttttaaaagactcgtgttggtttgtg 12827145  T
Q  217 gggtcagtcgacaat 231  Q
    |||||||||||||||    
T  12827144 gggtcagtcgacaat 12827130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 18 - 231
Target Start/End: Complemental strand, 22548639 - 22548425
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||  ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||||||||| ||    
T  22548639 gaaggaagttttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataataactccacagttaagcgtgct 22548540  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||||||||||||||||||||||||||||||| | || ||| ||  ||||| |||||||||| | ||||||||||||||| | || ||||||||||||    
T  22548539 tgacttggagcaattttgggatgggtgacctaccgggaagtttcccagtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtg 22548440  T
Q  217 gggtcagtcgacaat 231  Q
    |||||||||| ||||    
T  22548439 gggtcagtcggcaat 22548425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 18 - 239
Target Start/End: Original strand, 25148023 - 25148244
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| ||||||||||||||  |||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||| ||    
T  25148023 gaaggaaggcttataagaattgtttggtcttacctatatcaacaagatgcatattcttttcggtagctcattccataagaactccacagttaagcgtgct 25148122  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||| ||||||||||||||||||||||||||| |  || |||||||||| | ||||||||||   ||||||||||||||| | || ||||||||||||    
T  25148123 tgactttgagcaattttgggatgggtgacctacc-gggaagtttccgataaacgtgcgagtgaggtcaaaacacgctgaaaagactcgtgttggtttgtg 25148221  T
Q  217 gggtcagtcgacaatactaaaag 239  Q
    ||||||||||||||| |||||||    
T  25148222 gggtcagtcgacaatcctaaaag 25148244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 18 - 231
Target Start/End: Original strand, 25147592 - 25147805
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||| || |||||| ||| ||    
T  25147592 gaaggaaggcttataagaattgtttggtgctacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccatagttaatcgtgct 25147691  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||||||||||||||||||||||||||||||| | || ||| | ||||||| |||||||||| | ||||||||||||||| | || |||||||||||     
T  25147692 tgacttggagcaattttgggatgggtgacctaccgggaagtttcctgataagcgtgcgagtgagtacaaaacacgctgaaaagactcgtgttggtttgt- 25147790  T
Q  217 gggtcagtcgacaat 231  Q
    |||||||||| ||||    
T  25147791 gggtcagtcggcaat 25147805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 22 - 239
Target Start/End: Complemental strand, 27022424 - 27022207
Alignment:
Q  22 gaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtacttgac 120  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||||||| ||||||| |||| |||||||||||||| ||||||||||||| ||||||    
T  27022424 gaaggcttataagaattgtttggtactacctatatcaacaacatgcatcttattttcggcagctcattccataagaactccacagttaagcgtgcttgac 27022325  T
Q  121 ttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggt 220  Q
    |||||||||||||||||||||||||||||  |||| ||||  | ||||| |||||||||| | |||||||||| |||| | || ||||||||||||||||    
T  27022324 ttggagcaattttgggatgggtgacctactggaaagtttt-tggtaagcgtgcgagtgaggacaaaacacgctaaaaagactcgtgttggtttgtggggt 27022226  T
Q  221 cagtcgacaatactaaaag 239  Q
    ||||||||||| |||||||    
T  27022225 cagtcgacaatcctaaaag 27022207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 18 - 231
Target Start/End: Complemental strand, 34308569 - 34308355
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagc-tattccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| |||||||| ||    
T  34308569 gaaggaaggcttataagaactgtttggtactacctatatcaacaagatgcatcttcttttcggtagcctattccataagaactccacacttaagcgtgct 34308470  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    || ||||||||||||||| ||||||||||||||| | || ||| ||| |||||||| ||||||| | ||||||||||||||| | || || |||||||||    
T  34308469 tggcttggagcaattttgagatgggtgacctaccgggaagtttcccggtaagcatgtgagtgaggacaaaacacgctgaaaagactcgtgctggtttgtg 34308370  T
Q  217 gggtcagtcgacaat 231  Q
    |||||||||| ||||    
T  34308369 gggtcagtcggcaat 34308355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 26 - 241
Target Start/End: Original strand, 12100755 - 12100970
Alignment:
Q  26 gcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtacttgacttgg 124  Q
    ||||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||||||||| ||||||||||    
T  12100755 gcttataagatttgtttggtactacctatatcaataagatgcatcttcttttcggtagctcatttcataagaacttcacagttaagcgtgcttgacttgg 12100854  T
Q  125 agcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagt 224  Q
    ||||||||| |||||||||||||||| | || ||| |   ||||| |||||||||| | ||||||||||||||| | || ||||||||||||||||||||    
T  12100855 agcaatttt-ggatgggtgacctaccgggaagtttcctcgtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagt 12100953  T
Q  225 cgacaatactaaaagtc 241  Q
    ||||||| || ||||||    
T  12100954 cgacaatgctgaaagtc 12100970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 18 - 249
Target Start/End: Original strand, 27925955 - 27926186
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||| ||    
T  27925955 gaaggaaggattataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcatttcataagaactccacagttaagcgtgct 27926054  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    ||||||||||||| ||||||||||||||  |||| | || ||| ||| ||||  |||||||||| | |||||| |||||||| | || |||||||||||     
T  27926055 tgacttggagcaa-tttgggatgggtgaggtaccgggaagtttcccggtaagtgtgcgagtgaggacaaaacatgctgaaaagactcgtgttggtttgta 27926153  T
Q  217 gggtcagtcgacaatactaaaagtcatctggga 249  Q
    ||||||||||||||| || |||||| |||||||    
T  27926154 gggtcagtcgacaatgcttaaagtcgtctggga 27926186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 22 - 231
Target Start/End: Original strand, 22026439 - 22026650
Alignment:
Q  22 gaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtacttgac 120  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||||||    
T  22026439 gaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgac 22026538  T
Q  121 ttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtga-gaataaaacacgctgaaaaaattcatgttggtttgtgggg 219  Q
    |||||||||| ||||||||||| ||||| | | || ||| ||| ||||| ||||||||| ||  ||||||| ||||||| | || |||||||||||||||    
T  22026539 ttggagcaatattgggatgggtaacctatcgggaagtttcccggtaagcgtgcgagtgaggacaaaaacacactgaaaagactcgtgttggtttgtgggg 22026638  T
Q  220 tcagtcgacaat 231  Q
    ||||||| ||||    
T  22026639 tcagtcggcaat 22026650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 18 - 225
Target Start/End: Complemental strand, 34309029 - 34308817
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatat----caacaagatgcatcttcttttcggtagc-tattccataagaacttcacagttaagcg 112  Q
    ||||||||||||| ||||| |||||||||||||||||||    |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  34309029 gaaggaaggcttataagaactgtttggtactacctatatatatcaacaagatgcatcttcttttcggtagcctattccataagaactccacagttaagcg 34308930  T
Q  113 tacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtt 212  Q
    | |||| ||||||||||||||| ||||||||||||||| | || ||| ||| |||||||| ||||||| | ||||||||||||||| | || ||||||||    
T  34308929 tgcttggcttggagcaattttgagatgggtgacctaccgggaagtttcccggtaagcatgtgagtgaggacaaaacacgctgaaaagactcgtgttggtt 34308830  T
Q  213 tgtggggtcagtc 225  Q
    |||||||||||||    
T  34308829 tgtggggtcagtc 34308817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 18 - 231
Target Start/End: Complemental strand, 41659195 - 41658981
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    |||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||||| |||||||||||||  |    
T  41659195 gaaggaagacttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcgatagctcattacataagaactccacagttaagcgtgtt 41659096  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||||||||||||||||||| ||||||||||| | || ||| ||  ||||  |||||||||| | ||||||||||||||| | || ||||||||||||    
T  41659095 tgacttggagcaattttgggataggtgacctaccgggaagtttccctgtaagtgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtg 41658996  T
Q  217 gggtcagtcgacaat 231  Q
    |||||||||| ||||    
T  41658995 gggtcagtcggcaat 41658981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 26 - 239
Target Start/End: Complemental strand, 21316191 - 21315978
Alignment:
Q  26 gcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtacttgacttgg 124  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||| |||||||||| |||||||||| || ||||||||||    
T  21316191 gcttaaaagaattgtttggtactacctatatcaacaagatgcatcgtcttttcagtagctcatttcataagaactccacagttaagtgtgcttgacttgg 21316092  T
Q  125 agcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagt 224  Q
    || |||||||| | |||||||||||| |  || |||||| ||||| |||||||||| | ||||||||||||||| | || |||||||||||||||||| |    
T  21316091 agtaattttggtaagggtgacctacc-gcgaagtttccggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcaat 21315993  T
Q  225 cgacaatactaaaag 239  Q
    ||||||| |||||||    
T  21315992 cgacaatcctaaaag 21315978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 18 - 247
Target Start/End: Complemental strand, 8080432 - 8080202
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||| ||| | |||||||||||||||||||||||||||||||||||||| ||||||| ||||||  |||||||||||||||||||||||||||| ||    
T  8080432 gaaggaaagctgataagaattgtttggtactacctatatcaacaagatgcattttctttttggtagcccattccataagaacttcacagttaagcgtgct 8080333  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||||||| | | || |||||||| |||||| || || |||  || ||||| |||||||||| | ||||||||||||||| | || |||||||||||     
T  8080332 tgacttggagtagtctttggatgggtaacctactaggaagtttctcggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgta 8080233  T
Q  217 gggtcagtcgacaatactaaaagtcatctgg 247  Q
    ||| ||||||||||| || |||||| |||||    
T  8080232 gggccagtcgacaatgcttaaagtcgtctgg 8080202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 40 - 249
Target Start/End: Complemental strand, 31283719 - 31283510
Alignment:
Q  40 tttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggat 138  Q
    ||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||| |||||||||| || |||||||| |||||||||||| ||    
T  31283719 tttggtactacctatattaacaagatgcatcttcttttcggtagcccattccataagaactccacagttaagtgtgcttgactttgagcaattttgg-at 31283621  T
Q  139 gggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaa 238  Q
    |||||||||||| | || ||| ||| ||||| |||||||||| | ||||| || |||||| | || |||||||||||||||||||||||||||  | |||    
T  31283620 gggtgacctaccgggaagtttcccggtaagcgtgcgagtgaggacaaaacgcgttgaaaagactcgtgttggtttgtggggtcagtcgacaatgttgaaa 31283521  T
Q  239 gtcatctggga 249  Q
    ||| |||||||    
T  31283520 gtcgtctggga 31283510  T

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Target: chr8; HSP #18
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 18 - 146
Target Start/End: Original strand, 25144828 - 25144957
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||| ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||    
T  25144828 gaaggcaggcttataagaattgtttggtactacctatatcagcaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgct 25144927  T
Q  117 tgacttggagcaattttgggatgggtgacc 146  Q
    ||||||||||||||||||||||||||||||    
T  25144928 tgacttggagcaattttgggatgggtgacc 25144957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 18 - 225
Target Start/End: Original strand, 2044114 - 2044322
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtag-ctattccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||| ||||| | ||||||||| |||| ||||||||||||| ||    
T  2044114 gaaggaaggcttataagaattgtttgatactacctatatcaacaagatgcattttctttttggtagcccattccataataactccacagttaagcgtgct 2044213  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||||||| | | || ||||||||||||||   | || ||||||| ||||| |||||||||| | ||||||||||||||| | || | |||||||||     
T  2044214 tgacttggagtagtctttggatgggtgacctaatgggaagttttccggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtattggtttgta 2044313  T
Q  217 gggtcagtc 225  Q
    |||||||||    
T  2044314 gggtcagtc 2044322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 18 - 215
Target Start/End: Original strand, 32292453 - 32292651
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||| ||||| |||||||||||||||||| ||||||||||||| ||||||||||||| | ||||  |||||||||||||| ||||||||||||| ||    
T  32292453 gaaggaatgcttataagaattgtttggtactatctatatcaacaagttgcatcttctttttgctagcccattccataagaactccacagttaagcgtgct 32292552  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgt 215  Q
    |||||||||| | | || |||||||||| ||||| | || ||||||| ||||| || ||||||| | ||||||||||||||| | || |||||||||||    
T  32292553 tgacttggagtagtctttggatgggtgatctaccgggaagttttccggtaagcgtgtgagtgaggacaaaacacgctgaaaagactcgtgttggtttgt 32292651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 18 - 215
Target Start/End: Complemental strand, 33852348 - 33852150
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    |||||||  |||| ||||||||||||||||||||||||| ||||||||| |||||||||| ||||||  ||||||||||||||||||| |||||||| ||    
T  33852348 gaaggaaaacttataagaattgtttggtactacctatattaacaagatgtatcttctttttggtagcccattccataagaacttcacaattaagcgtgct 33852249  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgt 215  Q
    |||||||||| | | || |||||||||||||| | |||| |||   ||||||| |||||||||| | |||||||||| |||| | |||||||| |||||    
T  33852248 tgacttggagtagtctttggatgggtgacctatcggaaagtttcatgataagcgtgcgagtgaggacaaaacacgctaaaaagactcatgttgatttgt 33852150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 22 - 231
Target Start/End: Original strand, 41913030 - 41913240
Alignment:
Q  22 gaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtag-ctattccataagaacttcacagttaagcgtacttgac 120  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||| ||||| | |||||||||||||| | ||||||||||| ||||||    
T  41913030 gaaggcttataagaattgtttggtgctacctatatcaacaagatgcgtcttctttttggtagcccattccataagaactccgcagttaagcgtgcttgac 41913129  T
Q  121 ttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggt 220  Q
    ||| || | | || ||||| ||||||||| ||||| |||   | ||||| ||| |||||| | |||||||| |||||||| || |||| |||| | ||||    
T  41913130 ttgaagtagtctttggatgagtgacctactagaaagtttcttggtaagcgtgcaagtgaggacaaaacacgttgaaaaaactcgtgttagtttatagggt 41913229  T
Q  221 cagtcgacaat 231  Q
    |||||||||||    
T  41913230 cagtcgacaat 41913240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 18 - 145
Target Start/End: Complemental strand, 6465000 - 6464872
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||| |||| ||||||||||||| ||    
T  6465000 gaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcattttctttttggtagctcattccataacaactccacagttaagcgtgct 6464901  T
Q  117 tgacttggagcaattttgggatgggtgac 145  Q
    |||||||||| | | || |||||||||||    
T  6464900 tgacttggagtagtctttggatgggtgac 6464872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 18 - 121
Target Start/End: Original strand, 10844939 - 10845043
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||    
T  10844939 gaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgct 10845038  T
Q  117 tgact 121  Q
    |||||    
T  10845039 tgact 10845043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 27 - 241
Target Start/End: Complemental strand, 30527563 - 30527348
Alignment:
Q  27 cttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtacttgacttgga 125  Q
    |||| |||||||||||||||| || || ||||| ||||| ||||||||||| ||||||  ||| |||||||||| ||||||||||  |  ||||||| ||    
T  30527563 cttataagaattgtttggtaccacttacatcaataagatacatcttcttttgggtagcccatttcataagaactccacagttaagattgtttgactttga 30527464  T
Q  126 gcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtc 225  Q
    | ||| || |||||||||| ||||| ||||| || ||| ||||| |||||||||| ||||||||||||||||| | || ||||| ||||| || ||||||    
T  30527463 gtaatctttggatgggtgatctacctgaaaacttcccggtaagcgtgcgagtgaggataaaacacgctgaaaagactcgtgttgatttgtaggatcagtc 30527364  T
Q  226 gacaatactaaaagtc 241  Q
    |||||| || ||||||    
T  30527363 gacaatgcttaaagtc 30527348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 35 - 231
Target Start/End: Original strand, 6466783 - 6466976
Alignment:
Q  35 aattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctattccataagaacttcacagttaagcgtacttgacttggagcaattttg 134  Q
    ||||||||||||||||||||| ||||||||||||||||  ||||  |||| ||| |||||||||| || | ||||| |||||||||||||||||||||||    
T  6466783 aattgtttggtactacctataccaacaagatgcatctt--tttca-tagccatttcataagaactacaaatttaagtgtacttgacttggagcaattttg 6466879  T
Q  135 ggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 231  Q
    | ||||||||||| |  | || |||||    |||||| ||||||| || ||| ||| || |||||| ||||||||||||||||||||||||| ||||    
T  6466880 gtatgggtgaccttcttggaagttttctagaaagcatacgagtgaaaacaaagcacactaaaaaaactcatgttggtttgtggggtcagtcggcaat 6466976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 18 - 247
Target Start/End: Complemental strand, 15819105 - 15818876
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagc-tattccataagaacttcacagttaagcgtact 116  Q
    ||||||| ||||| || |||||||||||||||| |||||||||| ||||||||||||||||||||||  ||||||||||||| ||||||||||   | ||    
T  15819105 gaaggaatgcttagaaaaattgtttggtactacatatatcaacatgatgcatcttcttttcggtagcacattccataagaac-tcacagttaaatttgct 15819007  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||||||| |   || ||||||| ||||| |  | || ||| |||| |||  |||||||||| | ||| ||| ||||||| | |  ||||||||||||    
T  15819006 tgacttggagtaggctttggatgggcgaccttctgggaagtttcccgaaaagtgtgcgagtgaggacaaagcacactgaaaagacttgtgttggtttgtg 15818907  T
Q  217 gggtcagtcgacaatactaaaagtcatctgg 247  Q
    ||| |||||| ||||||| |||||| |||||    
T  15818906 gggccagtcggcaatacttaaagtcgtctgg 15818876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 28375144 - 28375042
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||  |||||||| | ||||| |||||||||| ||    
T  28375144 gaaggaaggcttataagaattgtttggtactacctacatcaacaagatgcatcttcttttcggtagctctttccataacagcttcatagttaagcgtgct 28375045  T
Q  117 tga 119  Q
    |||    
T  28375044 tga 28375042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 27 - 239
Target Start/End: Original strand, 28453403 - 28453616
Alignment:
Q  27 cttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtag-ctattccataagaacttcacagttaagcgtacttgacttgga 125  Q
    |||| |||||||||||  |||||||||||| |||||||||||||||||||  ||||| | ||||||||||||||  |||||||||||| |||||||||||    
T  28453403 cttataagaattgttttatactacctatattaacaagatgcatcttctttatggtagcccattccataagaactctacagttaagcgtgcttgacttgga 28453502  T
Q  126 gcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtc 225  Q
    | | | || |||||| ||||||||  | || ||| |  |||||  |||||||||| | |||||| |||||||| | || |||| ||||||  | ||||||    
T  28453503 gtagtctttggatggatgacctactcggaagtttcctaataagactgcgagtgaggacaaaacatgctgaaaagagtcgtgtttgtttgtaagatcagtc 28453602  T
Q  226 gacaatactaaaag 239  Q
    |||||| |||||||    
T  28453603 gacaatcctaaaag 28453616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 18 - 222
Target Start/End: Original strand, 3745157 - 3745362
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    |||||||  |||| ||||| ||||| |||||||||||| |||||| |||||||||||||| ||||||  ||||||||| |||| |||||| |||||| ||    
T  3745157 gaaggaaaacttataagaactgtttagtactacctataccaacaatatgcatcttctttttggtagcccattccataataactccacagtcaagcgtgct 3745256  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttc-cgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgt 215  Q
    |||||| ||||||||||||||||| ||||| | | || || |||| | | |||| || || ||| ||||||||| |||||||| | |||||||| |||||    
T  3745257 tgacttagagcaattttgggatggctgacc-atctgagaagtttctcaaaaagcgtgtgaatgataataaaacatgctgaaaagactcatgttgatttgt 3745355  T
Q  216 ggggtca 222  Q
     ||||||    
T  3745356 tgggtca 3745362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 18 - 147
Target Start/End: Complemental strand, 27819336 - 27819206
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||||| | ||||||||||||||||||||||||||||||| |||||||||||||||  ||||| ||||||||| |||| |||||||||| ||  |    
T  27819336 gaaggaaggctaataagaattgtttggtactacctatatcaacaaaatgcatcttcttttcaatagctcattccataaaaactccacagttaagtgtgtt 27819237  T
Q  117 tgacttggagcaattttgggatgggtgacct 147  Q
    |||||| ||| | | || |||||||||||||    
T  27819236 tgactttgagtagtatttggatgggtgacct 27819206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 27021969 - 27021904
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtag 83  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  27021969 gaaggaaggcttataagaattgtttggtactacttatatcaacaagatgcatcttcttttcggtag 27021904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 22 - 106
Target Start/End: Complemental strand, 22840615 - 22840530
Alignment:
Q  22 gaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagt 106  Q
    |||| |||| |||||||||||||||||| ||||||||||||||||||||||||||| | ||||| |||||||||||||| ||||||    
T  22840615 gaagacttataagaattgtttggtactatctatatcaacaagatgcatcttctttttgttagctcattccataagaactccacagt 22840530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 147
Target Start/End: Complemental strand, 15567646 - 15567516
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| ||||||||||||  ||||| |||| ||||||||| ||||||||||| ||||| | ||| |||||||||| | ||||||| |||  |    
T  15567646 gaaggaaggcttataagaattgtttgacactacatataccaacaagatacatcttctttttggtagttcatttcataagaactccgcagttaatcgtgtt 15567547  T
Q  117 tgacttggagcaattttgggatgggtgacct 147  Q
    |||||||||| | |||||| |||| ||||||    
T  15567546 tgacttggagtagttttggaatggatgacct 15567516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 18 - 144
Target Start/End: Complemental strand, 15568095 - 15567972
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctattccataagaacttcacagttaagcgtactt 117  Q
    |||||||| |||| || ||||||||||||  |||||||||||||||||||||||| ||||   |   | ||  ||||||||| |||| ||||||||||||    
T  15568095 gaaggaagacttataacaattgtttggtatgacctatatcaacaagatgcatcttttttttttt---tttttaataagaactccacaattaagcgtactt 15567999  T
Q  118 gacttggagcaattttgggatgggtga 144  Q
    ||||  |||||||||||||||||||||    
T  15567998 gactcagagcaattttgggatgggtga 15567972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 115 - 231
Target Start/End: Original strand, 32292095 - 32292211
Alignment:
Q  115 cttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttg 214  Q
    |||||||||||| | | || |||||||||||||||| | || ||| ||| ||||| |||||||||| | ||||||||||||||| | || ||||||||||    
T  32292095 cttgacttggagtagtctttggatgggtgacctaccgggaagtttcccggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttg 32292194  T
Q  215 tggggtcagtcgacaat 231  Q
    | |||||||||| ||||    
T  32292195 tagggtcagtcggcaat 32292211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 22705228 - 22705282
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatctt 72  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  22705228 gaaggaagggttataagaattgtttggtactacctatatcaacaagatgcatctt 22705282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 145
Target Start/End: Original strand, 3744694 - 3744822
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagc-tattccataagaacttcacagttaagcgtact 116  Q
    |||||||| |||| ||||||||||||  |||||||||| |||||| ||||| |||||||| ||||||  ||| ||||||||||  ||| |||||| |  |    
T  3744694 gaaggaagacttataagaattgtttgacactacctataccaacaatatgcaccttctttttggtagcacatttcataagaactctacaattaagctttat 3744793  T
Q  117 tgacttggagcaattttgggatgggtgac 145  Q
    | |||| ||||||||||||||| ||||||    
T  3744794 taactttgagcaattttgggattggtgac 3744822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 34 - 249
Target Start/End: Original strand, 6466329 - 6466544
Alignment:
Q  34 gaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctattccataagaacttcacagttaagcgtacttgacttggagcaatttt 133  Q
    ||||||||||||||||| |||| ||||||| ||||||||| ||| |||||  ||| |||||||| | ||  |||| | || ||||||||| |||||||||    
T  6466329 gaattgtttggtactacttataccaacaagttgcatcttccttttggtagtcatttcataagaaatccattgttaggtgtgcttgacttgaagcaatttt 6466428  T
Q  134 gggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatac 233  Q
    | |||  ||| |||    | || |||  | | |||||| |||||||| | ||| |||||| |||| | |  ||||||||||||||| |||||| ||||||    
T  6466429 gagataagtggccttttgggaagtttctcaaaaagcatacgagtgaggacaaagcacgctaaaaagacttgtgttggtttgtggggccagtcggcaatac 6466528  T
Q  234 taaaagtcatctggga 249  Q
    | |||||| |||||||    
T  6466529 tgaaagtcgtctggga 6466544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 58 - 215
Target Start/End: Complemental strand, 10729736 - 10729580
Alignment:
Q  58 aacaagatgcatcttcttttcggtagc-tattccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaa 156  Q
    |||||||||||||||||||| |||||| ||||||||||| ||| |||| ||||| || |||| |||| |||||||||||||||  ||||||    ||||     
T  10729736 aacaagatgcatcttctttttggtagcctattccataaggactccacaattaagggtgcttggcttgaagcaattttgggatgactgaccttatggaaag 10729637  T
Q  157 ttttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgt 215  Q
    |||   || |||| |||||||||  | ||||||  | ||||||||||||||||||||||    
T  10729636 tttcatgaaaagcgtgcgagtgaagacaaaaca--cagaaaaaattcatgttggtttgt 10729580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 51 - 239
Target Start/End: Original strand, 25307855 - 25308042
Alignment:
Q  51 ctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctac 149  Q
    ||||||||||||||| |||||| |||  ||||||  ||||  |||||||| ||||||||||| | |||||||||| | | | || ||||||||||| |||    
T  25307855 ctatatcaacaagatacatctttttt--ggtagcccattctgtaagaactccacagttaagcttgcttgacttggtgtagtctttggatgggtgacgtac 25307952  T
Q  150 cagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaag 239  Q
      |||| |||| ||  |||| |||||||||| | |||  |||||||||| | || ||||| ||| |||| ||||||| |||| |||||||    
T  25307953 ttgaaagtttttcggcaagcgtgcgagtgaggacaaagtacgctgaaaagactcgtgttgatttatgggatcagtcggcaatcctaaaag 25308042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 147
Target Start/End: Original strand, 1297072 - 1297193
Alignment:
Q  27 cttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggta-gctattccataagaacttcacagttaagcgtacttgacttgga 125  Q
    |||| |||||||||||||||||||||||| |||||||||  || ||||||||||||  | |||  ||||||||| || ||||||| ||  |||||||| |    
T  1297072 cttataagaattgtttggtactacctataccaacaagatttatattcttttcggtatcccattatataagaactccatagttaagtgtgtttgacttgaa 1297171  T
Q  126 gcaattttgggatgggtgacct 147  Q
    | ||| || ||||| |||||||    
T  1297172 gtaatctttggatgagtgacct 1297193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 241
Target Start/End: Complemental strand, 6463510 - 6463409
Alignment:
Q  141 gtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttgg-tttgtggggtcagtcgacaatactaaaag 239  Q
    |||||||||||||||| ||  || ||||| |||||||||| | ||||||||||||||| | || |||||| ||| | ||||||||||||||| || ||||    
T  6463510 gtgacctaccagaaaacttctcggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggttttttagggtcagtcgacaatgcttaaag 6463411  T
Q  240 tc 241  Q
    ||    
T  6463410 tc 6463409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 22 - 109
Target Start/End: Complemental strand, 30334994 - 30334906
Alignment:
Q  22 gaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaa 109  Q
    |||| |||| || ||||||||| ||||||||||| ||||||||| ||||||||||||| ||||| | | ||||| ||||||| ||||||    
T  30334994 gaagacttataaaaattgtttgatactacctataccaacaagatacatcttcttttcgatagctcaattcataataacttcatagttaa 30334906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 231
Target Start/End: Original strand, 9251093 - 9251155
Alignment:
Q  169 catgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 231  Q
    |||| ||||||| | ||||||||||||||||| |  |||||||||||||||||| ||||||||    
T  9251093 catgtgagtgaggacaaaacacgctgaaaaaacttgtgttggtttgtggggtcaatcgacaat 9251155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 17429556 - 17429611
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttc 73  Q
    |||||||| ||||  || ||| ||||||||||||||||||||||||||| ||||||    
T  17429556 gaaggaagacttatgagtattatttggtactacctatatcaacaagatgtatcttc 17429611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 139; Significance: 9e-73; HSPs: 54)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 18 - 231
Target Start/End: Original strand, 20850377 - 20850591
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  |||||||||||| ||    
T  20850377 gaaggaaggcttataagaattgttttgtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactctacagttaagcgtgct 20850476  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||||||||||||||||||||||||||||||| | || ||| ||| ||||| |||||||||| | ||||||||||||||| | || ||||||||||||    
T  20850477 tgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtg 20850576  T
Q  217 gggtcagtcgacaat 231  Q
    |||||||||| ||||    
T  20850577 gggtcagtcggcaat 20850591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 18 - 231
Target Start/End: Complemental strand, 13191603 - 13191389
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagcta-ttccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||    
T  13191603 gaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcgttccataagaacttcacagttaagcgtgct 13191504  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||||||||||||||| ||||||||||| ||| | || ||| ||||||||| |||||||||| | |||| || ||||||| | || ||||||||||||    
T  13191503 tgacttggagcaattttgagatgggtgaccaaccgggaagtttcccgataagcgtgcgagtgaggacaaaatacactgaaaagactcgtgttggtttgtg 13191404  T
Q  217 gggtcagtcgacaat 231  Q
    |||||||||| ||||    
T  13191403 gggtcagtcggcaat 13191389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 18 - 231
Target Start/End: Complemental strand, 17027621 - 17027407
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||| ||||||||||||| ||    
T  17027621 gaaggaaggcttataagaattgtttggtactacctatatcaacaagattcatcttcttttcggtagctcatttcataagaactccacagttaagcgtgct 17027522  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||||||||||||||||||||||||||||||| | || ||| ||| ||||| || ||||||| | ||||||||||||||| | || ||||||||||||    
T  17027521 tgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagcgtgtgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtg 17027422  T
Q  217 gggtcagtcgacaat 231  Q
    |||||||||| ||||    
T  17027421 gggtcagtcggcaat 17027407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 18 - 231
Target Start/End: Original strand, 7911934 - 7912148
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    |||||||  |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| || | ||    
T  7911934 gaaggaaaacttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttatgcttgct 7912033  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||||||||||||||||||||||||||||||| | ||  ||  || |||||||||||||||| | ||||||||||||||| | |  ||||||||||||    
T  7912034 tgacttggagcaattttgggatgggtgacctaccgggaagattctcggtaagcatgcgagtgaggacaaaacacgctgaaaagacttgtgttggtttgtg 7912133  T
Q  217 gggtcagtcgacaat 231  Q
    |||||||||||||||    
T  7912134 gggtcagtcgacaat 7912148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 23 - 231
Target Start/End: Original strand, 13492393 - 13492603
Alignment:
Q  23 aaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagcta-ttccataagaacttcacagttaagcgtacttgact 121  Q
    |||||||| |||||||||||| || ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||||    
T  13492393 aaggcttataagaattgtttgatattacctatatcaacaagatgcatcttcttttcggtagctaattccataagaactccacagttaagcgtgcttgact 13492492  T
Q  122 tggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtga-gaataaaacacgctgaaaaaattcatgttggtttgtggggt 220  Q
    ||||||||||||||||||||||||||||| | || ||| ||  ||||| ||||||||| ||| ||||||||||||||| | || ||||||||||||||||    
T  13492493 tggagcaattttgggatgggtgacctaccgggaagtttcccagtaagcgtgcgagtgaggaaaaaaacacgctgaaaagactcgtgttggtttgtggggt 13492592  T
Q  221 cagtcgacaat 231  Q
    |||||| ||||    
T  13492593 cagtcggcaat 13492603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 37 - 231
Target Start/End: Original strand, 9352137 - 9352332
Alignment:
Q  37 ttgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgg 135  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  9352137 ttgtttggtactacctatataaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgg 9352236  T
Q  136 gatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 231  Q
    ||||||||||||||| | || |||  || ||||| |||||||||| | |||||| |||||||| | || |||||||||||||||||||||| ||||    
T  9352237 gatgggtgacctacctggaagtttctcggtaagcgtgcgagtgaggacaaaacatgctgaaaagactcgtgttggtttgtggggtcagtcggcaat 9352332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 18 - 223
Target Start/End: Complemental strand, 20896778 - 20896571
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||| ||| ||||||||| ||    
T  20896778 gaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcagtagctcattccataagaactccacggttaagcgtgct 20896679  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtga-gaataaaacacgctgaaaaaattcatgttggtttgt 215  Q
    || ||||||||||||||||||||||||||||||| | |||||| ||| ||||  ||||||||| ||  ||||||| ||||||| | || |||||||||||    
T  20896678 tggcttggagcaattttgggatgggtgacctaccgggaaatttcccggtaagtgtgcgagtgaggagaaaaacacactgaaaagactcgtgttggtttgt 20896579  T
Q  216 ggggtcag 223  Q
    ||||||||    
T  20896578 ggggtcag 20896571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 18 - 225
Target Start/End: Original strand, 13492845 - 13493054
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||    
T  13492845 gaaggaaggcttataataattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgct 13492944  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtga-gaataaaacacgctgaaaaaattcatgttggtttgt 215  Q
    |||||| ||||||||||||||||||||||||||| |||| ||  ||| ||||| ||||||||| ||  |||||| |||||||| | || ||||| |||||    
T  13492945 tgacttagagcaattttgggatgggtgacctaccggaaagttacccggtaagcgtgcgagtgaggacaaaaacatgctgaaaagactcgtgttgatttgt 13493044  T
Q  216 ggggtcagtc 225  Q
     |||||||||    
T  13493045 agggtcagtc 13493054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 34 - 249
Target Start/End: Original strand, 7912382 - 7912598
Alignment:
Q  34 gaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattt 132  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| || |||||| ||| ||||||||||||||||||    
T  7912382 gaattgtttggtactacctatatcaacaagatgcattttcttttcggtagctcattccataagaactccatagttaaacgtgcttgacttggagcaattt 7912481  T
Q  133 tgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaata 232  Q
    ||| ||||||||||| |  | || ||| ||| ||||| | |||||||| | ||||||||||||||| | ||||||||||||||||||| ||||| ||||     
T  7912482 tggaatgggtgacctgctgggaagtttcccgttaagcgtacgagtgaggacaaaacacgctgaaaagactcatgttggtttgtggggttagtcggcaatc 7912581  T
Q  233 ctaaaagtcatctggga 249  Q
    || ||||  ||||||||    
T  7912582 ctgaaagcaatctggga 7912598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 18 - 231
Target Start/End: Original strand, 23776497 - 23776710
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    |||||||| |||| |||||| || |||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||||||    
T  23776497 gaaggaagacttataagaatcgtctggtactacctatatcaacaagatgcatcttcttttcggtagctcatttcataagaacttcaca-ttaagcgtact 23776595  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||||||||||||||||||||| ||||||||  | || ||| |   ||| | |||||||||  | ||||||||||||||| |||| ||||||||||||    
T  23776596 tgacttggagcaattttgggatggatgacctactgggaagtttcctagtaaacgtgcgagtgacgacaaaacacgctgaaaagattcgtgttggtttgtg 23776695  T
Q  217 gggtcagtcgacaat 231  Q
    | |||||||| ||||    
T  23776696 gagtcagtcggcaat 23776710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 18 - 231
Target Start/End: Complemental strand, 23986407 - 23986193
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||| ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| |  |||||||||||||||||||||| || ||    
T  23986407 gaaggtaggcttataagaattgtttggtactacctatatgaacaagatgcatcttcttttcggtagctcaaaccataagaacttcacagttaagtgtgct 23986308  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    ||||||||||||||||||||||||||||||| |  | || |||  ||  |||| |||||||||| | || |||||||||||| | |  ||||||||||||    
T  23986307 tgacttggagcaattttgggatgggtgaccttctgggaagtttcacggaaagcgtgcgagtgaggagaagacacgctgaaaagacttgtgttggtttgtg 23986208  T
Q  217 gggtcagtcgacaat 231  Q
    |||||||||| ||||    
T  23986207 gggtcagtcggcaat 23986193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 19 - 231
Target Start/End: Complemental strand, 17731202 - 17730985
Alignment:
Q  19 aaggaaggcttaaaagaattgtttggtactacctatatcaacaagat----gcatcttcttttcggtagct-attccataagaacttcacagttaagcgt 113  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||||    |||||||||||||||||||| ||||  |||||||| |||| ||||||||    
T  17731202 aaggaagacttataagaattgtttggtactacctatatcaacaagatagatgcatcttcttttcggtagctcattctttaagaactccacatttaagcgt 17731103  T
Q  114 acttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggttt 213  Q
     |||||||||||||||||||| ||| ||||||||||| |||| |||  || ||||| ||| |||||| | |||||||||| |||| | || |||||||||    
T  17731102 gcttgacttggagcaattttgagataggtgacctaccggaaagtttatcggtaagcgtgcaagtgaggacaaaacacgctaaaaagactcgtgttggttt 17731003  T
Q  214 gtggggtcagtcgacaat 231  Q
    || |||||||||||||||    
T  17731002 gtagggtcagtcgacaat 17730985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 18 - 147
Target Start/End: Original strand, 16520024 - 16520154
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    |||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||    
T  16520024 gaaggaaggcttatgagatttgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgct 16520123  T
Q  117 tgacttggagcaattttgggatgggtgacct 147  Q
    |||||||||||||||||| ||||||||||||    
T  16520124 tgacttggagcaattttgagatgggtgacct 16520154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 18 - 238
Target Start/End: Original strand, 11062341 - 11062562
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||| ||||||  |||||||||||||| ||||||||||||| ||    
T  11062341 gaaggaaggcttataagaagtgttttgtactacctatatcaacaagatgcatcttctttttggtagcccattccataagaactccacagttaagcgtgct 11062440  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||||||| | | || |||||||||||||| | |||| ||| ||||||| |  | ||||||| | |||||||||||||||||||  ||||| ||| |     
T  11062441 tgacttggagtagtctttggatgggtgacctatcggaaagtttcccgataaacccgtgagtgaggacaaaacacgctgaaaaaatttgtgttgatttata 11062540  T
Q  217 gggtcagtcgacaatactaaaa 238  Q
    | |||||||| |||| ||||||    
T  11062541 gagtcagtcggcaatcctaaaa 11062562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 61 - 231
Target Start/End: Original strand, 28780209 - 28780380
Alignment:
Q  61 aagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattt 159  Q
    |||||||||||| |||||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| | || |||    
T  28780209 aagatgcatcttgttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagttt 28780308  T
Q  160 tccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 231  Q
    || | ||||  |||||||||| ||||||||   |||||| | || ||||||||||||||||||| |||||||    
T  28780309 tctggtaagtgtgcgagtgaggataaaacattttgaaaagactcgtgttggtttgtggggtcagccgacaat 28780380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 18 - 249
Target Start/End: Complemental strand, 20126272 - 20126040
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagc-tattccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| |||||| ||||| ||||||||||||||||||||||||||||||||| ||||||  |||||||||||| | |||| |||||||| ||    
T  20126272 gaaggaaggcttataagaatggtttgatactacctatatcaacaagatgcatcttctttttggtagcacattccataagaattccacaattaagcgtgct 20126173  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||||||| | | || | ||||| ||||||||   || ||| ||  ||||| |||||||||| | ||||||| ||||||| | || |||||||||||     
T  20126172 tgacttggagtagtctttgaatgggcgacctacctagaagtttcccagtaagcgtgcgagtgaggacaaaacacactgaaaagactcgtgttggtttgta 20126073  T
Q  217 gggtcagtcgacaatactaaaagtcatctggga 249  Q
    ||||| ||||||||| || |||||| |||||||    
T  20126072 gggtccgtcgacaatgcttaaagtcgtctggga 20126040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 18 - 231
Target Start/End: Complemental strand, 2890929 - 2890715
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtag-ctattccataagaacttcacagttaagcgtact 116  Q
    ||||||||| ||| |||||||||| || |||||||||||||| ||||||| |||||||||| |||| | |||||||||||||| ||||||||||||| ||    
T  2890929 gaaggaaggtttataagaattgttagggactacctatatcaaaaagatgcttcttcttttcagtagcccattccataagaactccacagttaagcgtgct 2890830  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    ||||||| |  | |  | |||||||||||||||    || ||| ||||||||| |||||||||| | |||||||||| |||| | || |||||||||||     
T  2890829 tgacttgaaatagtactaggatgggtgacctactgagaagtttcccgataagcgtgcgagtgaggacaaaacacgctaaaaagactcgtgttggtttgta 2890730  T
Q  217 gggtcagtcgacaat 231  Q
    |||||||||||||||    
T  2890729 gggtcagtcgacaat 2890715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 22 - 147
Target Start/End: Original strand, 15929642 - 15929768
Alignment:
Q  22 gaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtacttgac 120  Q
    ||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| |||||||||||||  || ||    
T  15929642 gaaggcttataagaattatttggtactacctatatcaacaaaatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgtttaac 15929741  T
Q  121 ttggagcaattttgggatgggtgacct 147  Q
     || |||||||||||||||||||||||    
T  15929742 atgaagcaattttgggatgggtgacct 15929768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 22 - 242
Target Start/End: Original strand, 1991613 - 1991834
Alignment:
Q  22 gaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtacttgac 120  Q
    ||||||||| ||||||||||||||| ||| ||| | |||||||||||||||||||||||||||| ||| |||||||||||||||||||| | |  ||||     
T  1991613 gaaggcttacaagaattgtttggtattacatatctaaacaagatgcatcttcttttcggtagctcatttcataagaacttcacagttaaacattattgat 1991712  T
Q  121 ttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggt 220  Q
    |||||| | |||| ||||||||||||| |   ||| |||||||| ||||||| ||||||  | |||  |||||||||||| || ||||| |||||||| |    
T  1991713 ttggagtagtttttggatgggtgaccttctgaaaagttttccgaaaagcatgtgagtgaagacaaagtacgctgaaaaaactcgtgttgatttgtgggat 1991812  T
Q  221 cagtcgacaatactaaaagtca 242  Q
    ||||| |||||| | |||||||    
T  1991813 cagtcaacaatatttaaagtca 1991834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 26 - 147
Target Start/End: Complemental strand, 9440391 - 9440269
Alignment:
Q  26 gcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtacttgacttgg 124  Q
    ||||| |||||||||| |||||||| |||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||| || ||||| ||||    
T  9440391 gcttataagaattgttcggtactacttatatcaacaagatgcattttcttttcggtagctcactccataagaacttcacagttaagtgtgcttgatttgg 9440292  T
Q  125 agcaattttgggatgggtgacct 147  Q
    ||||||||| |||||||||||||    
T  9440291 agcaatttttggatgggtgacct 9440269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 22 - 142
Target Start/End: Complemental strand, 2681302 - 2681181
Alignment:
Q  22 gaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtacttgac 120  Q
    |||| |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||| ||| |     
T  2681302 gaagacttataagaattgtttggtactacccatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacaattaagcgtgcttaat 2681203  T
Q  121 ttggagcaattttgggatgggt 142  Q
    ||||| ||||||||||||||||    
T  2681202 ttggaacaattttgggatgggt 2681181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 18 - 249
Target Start/End: Original strand, 21311571 - 21311803
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    |||||||| |||| ||||||||||||||| |||||| || |||||||| ||||||||||| || |||| |||||||||||||| | ||||||||||| ||    
T  21311571 gaaggaagccttataagaattgtttggtattacctagataaacaagatccatcttctttttggaagctcattccataagaactccgcagttaagcgtgct 21311670  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||| ||| | | ||  ||||||||||||||| | |  ||||||| ||||  |||||||||  | ||||||||||| ||  | || |||||||||||     
T  21311671 tgactttgagtagtcttatgatgggtgacctaccgggatgttttccggtaagtgtgcgagtgaagacaaaacacgctgtaaggactcgtgttggtttgta 21311770  T
Q  217 gggtcagtcgacaatactaaaagtcatctggga 249  Q
    |||||| |||||||| || |||||| |||||||    
T  21311771 gggtcaatcgacaatgcttaaagtcgtctggga 21311803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 18 - 249
Target Start/End: Original strand, 21312027 - 21312259
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtag-ctattccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||||| | ||| |||||||| | || |||||| ||| ||    
T  21312027 gaaggaaggcttataagaattgttaggtactacctatatcaacaagatgcatcttctttttggtagcccatttcataagaaatccatagttaaacgtgct 21312126  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||||||||| | ||  |||| |||||||||| | || ||| ||| ||||  ||  |||||  | |||||||  |||||| | |  |||||||||||     
T  21312127 tgacttggagcagtcttatgatgagtgacctaccgggaagtttcccggtaagtgtgtaagtgaagacaaaacacattgaaaagactggtgttggtttgta 21312226  T
Q  217 gggtcagtcgacaatactaaaagtcatctggga 249  Q
    ||||||||||||||| || |||||| |||||||    
T  21312227 gggtcagtcgacaatgcttaaagtcgtctggga 21312259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 18 - 231
Target Start/End: Complemental strand, 2720654 - 2720439
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatc-ttcttttcggtagct-attccataagaacttcacagttaagcgtac 115  Q
    |||||||| |||| ||||||||||||||||||||||||| |||||||  |||| || |||| ||||||| |||||||||||||| |||||||||| || |    
T  2720654 gaaggaagacttataagaattgtttggtactacctatattaacaagacacatctttttttttggtagctcattccataagaactccacagttaagtgtgc 2720555  T
Q  116 ttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgt 215  Q
    ||||||||||| | | || ||||||||||| ||   | || ||| ||||||||| |||||||||||| |||||||||||| || | || ||| ||||||     
T  2720554 ttgacttggagtagtctttggatgggtgacatattgggaagtttcccgataagcgtgcgagtgagaacaaaacacgctgagaagactcgtgtcggtttgc 2720455  T
Q  216 ggggtcagtcgacaat 231  Q
     |||||||||| ||||    
T  2720454 agggtcagtcggcaat 2720439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 18 - 231
Target Start/End: Complemental strand, 9440947 - 9440733
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||| ||||| ||||||| ||||||||||| | |||||||||||||||| |||||||| |||||  |  |||||||||||||||||||||| ||  |    
T  9440947 gaaggaatgcttataagaattctttggtactacttttatcaacaagatgcattttcttttcagtagcccaaaccataagaacttcacagttaagtgtgtt 9440848  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||| |||||||||||||||||||||||| |  | || ||| |||| ||   ||| |||||  | |||| |||||||||||| || || |||||||||    
T  9440847 tgactttgagcaattttgggatgggtgaccttcttggaagtttcccgaaaaatgtgcaagtgatgacaaaatacgctgaaaaaactcgtgctggtttgtg 9440748  T
Q  217 gggtcagtcgacaat 231  Q
    |||||||||| ||||    
T  9440747 gggtcagtcggcaat 9440733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 18 - 122
Target Start/End: Complemental strand, 6331002 - 6330897
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    |||||||| |||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||| ||||||||||||| ||    
T  6331002 gaaggaagacttataagaattgtttggtactacctatatcaacaatatgcatcttcttttcggtagctcatttcataagaactccacagttaagcgtgct 6330903  T
Q  117 tgactt 122  Q
    ||||||    
T  6330902 tgactt 6330897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 18 - 231
Target Start/End: Complemental strand, 14771809 - 14771595
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggt-agctattccataagaacttcacagttaagcgtact 116  Q
    |||||||| |||| |||||||||||||||||||||||||||||||||| ||| ||||||| ||| | |||||||||||||||| |||||||||| || ||    
T  14771809 gaaggaagacttataagaattgtttggtactacctatatcaacaagatccatattctttttggtaatctattccataagaactccacagttaagtgtgct 14771710  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
     ||| ||||| | | || ||||| |||||||||  | || ||| ||  ||| | | |||| ||| | |||||||||||| || | ||||||||||||||     
T  14771709 agacgtggagtagtctttggatgagtgacctactcggaagtttaccagtaaacgtacgagcgaggacaaaacacgctgataagactcatgttggtttgta 14771610  T
Q  217 gggtcagtcgacaat 231  Q
    | |||||||||||||    
T  14771609 gagtcagtcgacaat 14771595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 18 - 99
Target Start/End: Original strand, 27334217 - 27334299
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaact 99  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  27334217 gaaggaaagcttataagaattgtttggtactacctatatcaacaagatgaatcttcttttcggtagctcattccataagaact 27334299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 18 - 99
Target Start/End: Original strand, 27394957 - 27395039
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaact 99  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  27394957 gaaggaaagcttataagaattgtttggtactacctatatcaacaagatgaatcttcttttcggtagctcattccataagaact 27395039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 109
Target Start/End: Original strand, 3652542 - 3652634
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaa 109  Q
    ||||||||||||| ||||||||| || ||||||||||||||||||||||||||||||||| ||||| | |||||||||||||| |||||||||    
T  3652542 gaaggaaggcttataagaattgtctgatactacctatatcaacaagatgcatcttctttttggtagttcattccataagaactccacagttaa 3652634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 22 - 144
Target Start/End: Original strand, 17851434 - 17851557
Alignment:
Q  22 gaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtag-ctattccataagaacttcacagttaagcgtacttgac 120  Q
    ||||||||| ||||  ||||||||||||||| |||||||||||||||||||||||| ||||| | |||| ||||||||| |||| |||||||| ||||||    
T  17851434 gaaggcttataagatatgtttggtactacctttatcaacaagatgcatcttctttttggtagcccattctataagaactccacaattaagcgtgcttgac 17851533  T
Q  121 ttggagcaattttgggatgggtga 144  Q
    |||||| | | || ||||||||||    
T  17851534 ttggagtagtcttcggatgggtga 17851557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 38 - 149
Target Start/End: Original strand, 17850994 - 17851106
Alignment:
Q  38 tgtttggtactacctatatcaacaagatgcatcttcttttcggtag-ctattccataagaacttcacagttaagcgtacttgacttggagcaattttggg 136  Q
    ||||||||||||||| |||||||||||||||||||||||  ||||| | |||| ||||||||| ||||||||||||| |||||||||||| | | || ||    
T  17850994 tgtttggtactacctttatcaacaagatgcatcttctttctggtagcccattctataagaactccacagttaagcgtgcttgacttggagtagtcttcgg 17851093  T
Q  137 atgggtgacctac 149  Q
    ||||| |||||||    
T  17851094 atgggagacctac 17851106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 26 - 240
Target Start/End: Complemental strand, 28065920 - 28065703
Alignment:
Q  26 gcttaaaagaattgtttggtactacctatatcaacaagatgcatc---ttcttttcggtagc-tattccataagaacttcacagttaagcgtacttgact 121  Q
    ||||| |||||||||||||||||| || |||||||||||||||||   || |||| |||||| ||||||||||||||| |||| |||||| |  ||||||    
T  28065920 gcttataagaattgtttggtactatctctatcaacaagatgcatctttttttttttggtagcttattccataagaactccacaattaagcatgtttgact 28065821  T
Q  122 tggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtc 221  Q
    | ||||| ||||| ||||||| ||||  | || || ||||||| |||| || || |||  | |||||||||| |||||  ||||||||| ||  ||||||    
T  28065820 ttgagcagttttgtgatgggtaacctttc-gagaagtttccgaaaagcgtgtgaatgatgacaaaacacgctaaaaaatctcatgttggattacggggtc 28065722  T
Q  222 agtcgacaatactaaaagt 240  Q
    | ||||||||||| |||||    
T  28065721 aatcgacaatacttaaagt 28065703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 145
Target Start/End: Complemental strand, 3885177 - 3885052
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||| ||||||||||||||||||||||||| ||||  ||||| || |||||| ||   ||||||| ||||||||||||||||| |||| | ||| ||    
T  3885177 gaaggaatgcttaaaagaattgtttggtactacatatactaacaaaatacatcttttt---ggtagcttattccataagaacttcaaagttgaacgtgct 3885081  T
Q  117 tgacttggagcaattttgggatgggtgac 145  Q
    |||||||||||||||||| ||| ||||||    
T  3885080 tgacttggagcaattttgagataggtgac 3885052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 18 - 191
Target Start/End: Complemental strand, 33775094 - 33774918
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaaca--agatgcatcttcttttcggtag-ctattccataagaacttcacagttaagcgta 114  Q
    ||||||||| ||| ||||||||| |||| |||||||||||||||  |||||||||||||||| | ||| | |||||||||||||| |||||||||| ||     
T  33775094 gaaggaaggattataagaattgtctggtgctacctatatcaacaagagatgcatcttctttttgatagtccattccataagaactccacagttaagtgtg 33774995  T
Q  115 cttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacg 191  Q
     |||||||| || | | || |||||||||||||||    || |||| || ||||| |||||||||| | ||||||||    
T  33774994 tttgacttgcagtagtctttggatgggtgacctactgagaagtttttcggtaagcgtgcgagtgaggaaaaaacacg 33774918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 231
Target Start/End: Original strand, 20735753 - 20735965
Alignment:
Q  20 aggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtag-ctattccataagaacttcacagttaagcgtacttg 118  Q
    ||||||||||| |||||||||||| |||||| |||||||||||||||||||||||||||||||| | |||| |||| |||| || ||||||| ||  |||    
T  20735753 aggaaggcttataagaattgtttgatactacttatatcaacaagatgcatcttcttttcggtagtccattctataaaaactccatagttaagtgtggttg 20735852  T
Q  119 acttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggg 218  Q
     ||||||| |   || |||||||| |||| | || || ||| | |  |||||||| | |||| | |||||||||| |||| | |   || ||||||||||    
T  20735853 gcttggagtagcctttggatgggtaaccttcaaggaagtttccaggaaagcatgcaattgaggacaaaacacgctaaaaagacttgcgtcggtttgtggg 20735952  T
Q  219 gtcagtcgacaat 231  Q
    |||||| ||||||    
T  20735953 gtcagttgacaat 20735965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 61 - 241
Target Start/End: Complemental strand, 2891340 - 2891160
Alignment:
Q  61 aagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattt 159  Q
    ||||||||||||  ||| ||||||  ||||||||| |||| |||||||||  || ||||| |||||| | | || ||||||||||||||| |  |  |||    
T  2891340 aagatgcatctttgttttggtagcccattccataaaaactccacagttaaatgtgcttgatttggagtagtctttggatgggtgacctactacgatgttt 2891241  T
Q  160 tccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtc 241  Q
     ||| ||||| |||||||||| | ||||||||||||||| |||| ||||||||||| |||||||||| |||| || ||||||    
T  2891240 -ccggtaagcgtgcgagtgaggacaaaacacgctgaaaagattcgtgttggtttgtagggtcagtcggcaatgcttaaagtc 2891160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 40 - 226
Target Start/End: Original strand, 12194406 - 12194592
Alignment:
Q  40 tttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggat 138  Q
    ||||| |||| |||||||||||||||||||||||||||   ||  | |||||||||||||| ||||||||||| |  ||||| |||||||||||| ||||    
T  12194406 tttggcactatctatatcaacaagatgcatcttcttttttataattcattccataagaactccacagttaagcatgtttgacatggagcaattttaggat 12194505  T
Q  139 gggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcg 226  Q
    || ||||||   ||||| ||||||   || | || ||||  | | ||||||| ||||||| | |||||||||||| ||||||||||||    
T  12194506 ggatgaccttttagaaagttttccagaaaacgtgtgagtttggacaaaacacactgaaaagactcatgttggttt-tggggtcagtcg 12194592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 32 - 190
Target Start/End: Original strand, 17205409 - 17205567
Alignment:
Q  32 aagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtag-ctattccataagaacttcacagttaagcgtacttgacttggagcaat 130  Q
    ||||||||||||||||||||| || ||||||||| |||||| |||| ||||| | |||||||||||||| ||  ||||| | | ||||| |||||| |||    
T  17205409 aagaattgtttggtactacctttaccaacaagattcatcttgtttt-ggtagcccattccataagaactccattgttaaacatgcttgatttggagtaat 17205507  T
Q  131 tttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacac 190  Q
    ||||||||||| |||||    |||| |||| ||  || |||||||||||||| |||||||    
T  17205508 tttgggatgggagacctttatgaaagtttttcggaaaacatgcgagtgagaacaaaacac 17205567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 26 - 99
Target Start/End: Original strand, 15929263 - 15929337
Alignment:
Q  26 gcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaact 99  Q
    ||||| ||||||||||||||| | |||||||||| ||||||||| ||||||||||||||| ||||||||||||||    
T  15929263 gcttataagaattgtttggtaatgcctatatcaataagatgcatattcttttcggtagctcattccataagaact 15929337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 31821782 - 31821704
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataag 95  Q
    ||||||| ||||| ||||||| |||||||||| |||||||||||||||||||||| |||| ||||||| ||||||||||    
T  31821782 gaaggaatgcttataagaattatttggtactaactatatcaacaagatgcatcttttttttggtagctcattccataag 31821704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 35 - 139
Target Start/End: Complemental strand, 30729912 - 30729807
Alignment:
Q  35 aattgtttggtactacctatatcaacaagatgcatcttcttttcggtag-ctattccataagaacttcacagttaagcgtacttgacttggagcaatttt 133  Q
    |||||||||||||||| ||||| |||| |||  |||||||||| ||||| | |||| |||||||||| | |||||||||| ||||| || ||||||||||    
T  30729912 aattgtttggtactacgtatataaacatgattgatcttcttttgggtagtcaattctataagaactttatagttaagcgttcttgaatttgagcaatttt 30729813  T
Q  134 gggatg 139  Q
    ||||||    
T  30729812 gggatg 30729807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 96 - 240
Target Start/End: Original strand, 3652658 - 3652802
Alignment:
Q  96 aacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctga 195  Q
    |||| ||||||||||| | |||||||||||| | | || |||||||||||||||| | ||  || ||| ||||| |||||||||| | |||| | |||||    
T  3652658 aactccacagttaagcttgcttgacttggagtagtctttggatgggtgacctaccgggaagcttcccggtaagcgtgcgagtgaggacaaaaaaagctga 3652757  T
Q  196 aaaaattcatgttggtttgtggggtcagtcgacaatactaaaagt 240  Q
    ||| | || ||||||||||| |||||||| |||||| || |||||    
T  3652758 aaagactcttgttggtttgtagggtcagttgacaatgcttaaagt 3652802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 126
Target Start/End: Original strand, 20732636 - 20732743
Alignment:
Q  20 aggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtag-ctattccataagaacttcacagttaagcgtacttg 118  Q
    ||||||||||| ||||||| ||||||||||||||||| || || |||||| ||||||||||||| | |||| |||| ||||  || |||||| || ||||    
T  20732636 aggaaggcttataagaattatttggtactacctatattaataatatgcatattcttttcggtagcccattcaataaaaactctacggttaagagtgcttg 20732735  T
Q  119 acttggag 126  Q
    ||||||||    
T  20732736 acttggag 20732743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 22 - 133
Target Start/End: Original strand, 32292945 - 32293055
Alignment:
Q  22 gaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagc-tattccataagaacttcacagttaagcgtacttgac 120  Q
    ||||||||| |||||||||||||||||||||||| |||||| || |||||| ||||  ||| |  |||  ||||||||| || ||||||||| |||||||    
T  32292945 gaaggcttataagaattgtttggtactacctataccaacaaaatacatcttgtttttagtaacacatt--ataagaactccatagttaagcgaacttgac 32293042  T
Q  121 ttggagcaatttt 133  Q
    || ||||||||||    
T  32293043 tttgagcaatttt 32293055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 22 - 125
Target Start/End: Original strand, 28583023 - 28583127
Alignment:
Q  22 gaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtacttgac 120  Q
    ||||||||| ||||||| |||| ||| | |||||||||||||||||||| ||||| |||||| | |||||||||||| | ||||| |||| || ||||||    
T  28583023 gaaggcttataagaattatttgatacgatctatatcaacaagatgcatcatctttccggtagttcattccataagaaatccacagctaagtgtccttgac 28583122  T
Q  121 ttgga 125  Q
     ||||    
T  28583123 atgga 28583127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 240
Target Start/End: Complemental strand, 21729670 - 21729612
Alignment:
Q  182 ataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagt 240  Q
    ||||||||||||||||| |||||||||||||||   ||||||||| ||||||| |||||    
T  21729670 ataaaacacgctgaaaatattcatgttggtttggcaggtcagtcgtcaatacttaaagt 21729612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 231
Target Start/End: Original strand, 27334305 - 27334363
Alignment:
Q  173 cgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 231  Q
    |||||||| | ||||||||||||||| | || ||||| |||||||||||||||||||||    
T  27334305 cgagtgaggacaaaacacgctgaaaagactcgtgttgatttgtggggtcagtcgacaat 27334363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 231
Target Start/End: Original strand, 27395045 - 27395103
Alignment:
Q  173 cgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 231  Q
    |||||||| | ||||||||||||||| | || ||||| |||||||||||||||||||||    
T  27395045 cgagtgaggacaaaacacgctgaaaagactcgtgttgatttgtggggtcagtcgacaat 27395103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 234
Target Start/End: Original strand, 1664012 - 1664080
Alignment:
Q  166 aagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatact 234  Q
    |||| |||||||||||| |||| | ||| |||| ||||||||||||||||  ||||| |||||||||||    
T  1664012 aagcgtgcgagtgagaacaaaatatgctaaaaagattcatgttggtttgtctggtcaatcgacaatact 1664080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 226
Target Start/End: Original strand, 11062026 - 11062094
Alignment:
Q  158 tttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcg 226  Q
    |||||| ||||| |||||||||| | |||||||||| |||||| || ||||||||||| |||| |||||    
T  11062026 tttccggtaagcgtgcgagtgaggacaaaacacgctaaaaaaactcgtgttggtttgtagggttagtcg 11062094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 147
Target Start/End: Complemental strand, 34660584 - 34660468
Alignment:
Q  32 aagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaat 130  Q
    |||| |||||||||| || ||||||| |||| |||||||||| ||  ||||||| |   |||| ||||| || |||||||| ||||||||||| |||||     
T  34660584 aagagttgtttggtattatctatatcgacaatatgcatcttccttctggtagctcaaatcatacgaactccatagttaagcatacttgacttgaagcaag 34660485  T
Q  131 tttgggatgggtgacct 147  Q
    |||  ||||||||||||    
T  34660484 ttttagatgggtgacct 34660468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 240
Target Start/End: Complemental strand, 31416021 - 31415956
Alignment:
Q  174 gagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagt 240  Q
    ||||||| | ||||||||||||||| || | |||||||||||||| ||||||| ||||||| |||||    
T  31416021 gagtgaggacaaaacacgctgaaaagat-cgtgttggtttgtgggatcagtcggcaatacttaaagt 31415956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 125
Target Start/End: Original strand, 10964359 - 10964468
Alignment:
Q  17 agaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagc-tattccataagaacttcacagttaagcgtac 115  Q
    ||||| ||| |||| ||||||||||||||||||| |||||||| || ||  || ||||||| |||||| || ||||||| |||| ||||  |||| |||     
T  10964359 agaagaaagacttacaagaattgtttggtactacatatatcaataaaataaatattctttttggtagcttaatccataaaaactccacaaataagtgtat 10964458  T
Q  116 ttgacttgga 125  Q
    |||| |||||    
T  10964459 ttgagttgga 10964468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 139; Significance: 9e-73; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 18 - 231
Target Start/End: Complemental strand, 13150644 - 13150430
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||    
T  13150644 gaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgct 13150545  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||||||||||||||||||||||||||||||| | || ||| ||| ||||  |||||||||| | ||||||||||||||| | || ||||| ||||||    
T  13150544 tgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagtgtgcgagtgaggacaaaacacgctgaaaagactcgtgttgatttgtg 13150445  T
Q  217 gggtcagtcgacaat 231  Q
    |||||||||||||||    
T  13150444 gggtcagtcgacaat 13150430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 18 - 231
Target Start/End: Complemental strand, 31284366 - 31284152
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||    
T  31284366 gaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgct 31284267  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    ||||||||||||||||||||||||||||||| || | || |||||||| |||| |||||||| | | ||||||||| ||||| | || ||||||||||||    
T  31284266 tgacttggagcaattttgggatgggtgacctgccgggaagttttccgacaagcgtgcgagtggggacaaaacacgccgaaaagactcgtgttggtttgtg 31284167  T
Q  217 gggtcagtcgacaat 231  Q
    |||||||||| ||||    
T  31284166 gggtcagtcggcaat 31284152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 18 - 231
Target Start/End: Original strand, 50347802 - 50348016
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||| ||    
T  50347802 gaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttctttttggtagctcattccataagaactccacagttaagcgtgct 50347901  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    ||||||||||||||||||||||||||||||||||   || ||| ||||||||  |||||||||| | ||||||||||||||| | || ||||||||||||    
T  50347902 tgacttggagcaattttgggatgggtgacctaccgagaagtttcccgataagtgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtg 50348001  T
Q  217 gggtcagtcgacaat 231  Q
    |||||||||||||||    
T  50348002 gggtcagtcgacaat 50348016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 18 - 226
Target Start/End: Original strand, 28561802 - 28562010
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||    
T  28561802 gaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgct 28561901  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||||||||||||||||||| ||||||||||  | || ||| ||| ||||| |||||||||| | ||||||||||||||| | || ||||||||||||    
T  28561902 tgacttggagcaattttgggat-ggtgacctacggggaagtttcccggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtg 28562000  T
Q  217 gggtcagtcg 226  Q
    ||||||||||    
T  28562001 gggtcagtcg 28562010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 18 - 231
Target Start/End: Original strand, 16811437 - 16811649
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| |||||||||| |||||||||||| |||||||||||||||||||||||||||||| |||||||||||| | ||||||||||||| ||    
T  16811437 gaaggaaggcttataagaattgttgggtactacctatttcaacaagatgcatcttcttttcggtagctcattccataagaattccacagttaagcgtgct 16811536  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||||||||||||||||||||||||||||||| | || ||| |||||||||||||||||||| | |||  |||||||||| | || ||||||||||||    
T  16811537 tgacttggagcaattttgggatgggtgacctaccgggaagtttcccgataagcatgcgagtgaggacaaa--acgctgaaaagactcgtgttggtttgtg 16811634  T
Q  217 gggtcagtcgacaat 231  Q
    |||||||||| ||||    
T  16811635 gggtcagtcggcaat 16811649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 18 - 231
Target Start/End: Complemental strand, 11180124 - 11179910
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||| ||    
T  11180124 gaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttcttttcggtagctcatttcataagaactccacagttaagcgtgct 11180025  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||||||||||||||||||||||||||||||| | |  ||| ||| ||||  || ||||||| | ||||||||||||||| | || ||||||||||||    
T  11180024 tgacttggagcaattttgggatgggtgacctaccgggatgtttcccggtaagtgtgtgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtg 11179925  T
Q  217 gggtcagtcgacaat 231  Q
    |||||||||||||||    
T  11179924 gggtcagtcgacaat 11179910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 18 - 239
Target Start/End: Original strand, 39653220 - 39653442
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||| ||||| |||||||||| | ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||| || ||    
T  39653220 gaaggaaagcttataagaattgttggatactacctatatcaacaagatgcatcttcttttcggtagctcattccatgagaactccacagttaagtgtgct 39653319  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||||||||||||||||||||||||||||||| | || ||| ||| ||||  |||||||||| | ||||||||||||||| | || ||||||||||||    
T  39653320 tgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagtgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtg 39653419  T
Q  217 gggtcagtcgacaatactaaaag 239  Q
    ||||||||||||||| |||||||    
T  39653420 gggtcagtcgacaatgctaaaag 39653442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 19 - 231
Target Start/End: Original strand, 14820211 - 14820424
Alignment:
Q  19 aaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagcta-ttccataagaacttcacagttaagcgtactt 117  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||  ||||||||||||| ||||||||||||| |||    
T  14820211 aaggaaggcttataagaattgtttggtactacttatatcaacaagatgcatcttattttcggtagctcgttccataagaactccacagttaagcgtgctt 14820310  T
Q  118 gacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtgg 217  Q
    |||||||| |||||||||||||||||||||| | |||| ||| ||| ||||||||| |||||| | ||||||||||||||| | || |||||||||||||    
T  14820311 gacttggaacaattttgggatgggtgacctatcggaaagtttcccggtaagcatgcaagtgaggacaaaacacgctgaaaagactcgtgttggtttgtgg 14820410  T
Q  218 ggtcagtcgacaat 231  Q
    ||||||||| ||||    
T  14820411 ggtcagtcggcaat 14820424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 25 - 239
Target Start/End: Original strand, 8067343 - 8067558
Alignment:
Q  25 ggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtacttgacttg 123  Q
    |||||| ||||||||||| ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| || |||||||||| |||||||||    
T  8067343 ggcttataagaattgtttagtactacctatatcaacaagatgcatctttttttcggtagctcattccataagaactccatagttaagcgtgcttgacttg 8067442  T
Q  124 gagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcag 223  Q
    ||||||||||||||||||||||||||| | || ||| ||||||||| |||||||||| | ||||||||||||||| | || |||||||||||| |||||     
T  8067443 gagcaattttgggatgggtgacctaccgggaagtttcccgataagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtgaggtcaa 8067542  T
Q  224 tcgacaatactaaaag 239  Q
    ||| |||| |||||||    
T  8067543 tcggcaatcctaaaag 8067558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 18 - 231
Target Start/End: Original strand, 32227556 - 32227770
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||| ||    
T  32227556 gaaggaaggcttataagaattgttgggtactacctatattaacaagatgcatcttcttttcggtagctcatttcataagaactccacagttaagcgtgct 32227655  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||||||||||||||||||||||||||||||| | || ||| ||||||||  |||||||||| | |||||||  |||||| | || |||||||||||     
T  32227656 tgacttggagcaattttgggatgggtgacctaccgggaagtttcccgataagtgtgcgagtgaggaaaaaacacattgaaaagactcgtgttggtttgta 32227755  T
Q  217 gggtcagtcgacaat 231  Q
    |||||||||||||||    
T  32227756 gggtcagtcgacaat 32227770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 22 - 231
Target Start/End: Complemental strand, 27187416 - 27187205
Alignment:
Q  22 gaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtacttgac 120  Q
    ||||||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||| ||| |||||||||| ||||||||||||| ||||||    
T  27187416 gaaggcttataagaattgtttggtactacctatatcactaagatgcatcttcttttcggtagctcatttcataagaactccacagttaagcgtgcttgac 27187317  T
Q  121 ttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtga-gaataaaacacgctgaaaaaattcatgttggtttgtgggg 219  Q
    || ||||||||||||||||||||||||||| | || ||| ||||||||| ||||||||| ||  ||||||||||||||| | || |||||||||||||||    
T  27187316 tttgagcaattttgggatgggtgacctaccgggaagtttcccgataagcgtgcgagtgaggacaaaaacacgctgaaaagactcgtgttggtttgtgggg 27187217  T
Q  220 tcagtcgacaat 231  Q
    ||||||| ||||    
T  27187216 tcagtcggcaat 27187205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 18 - 231
Target Start/End: Complemental strand, 13150189 - 13149975
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| |||||||||| |||||||||| ||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||| ||    
T  13150189 gaaggaaggcttataagaattgttgggtactacctgtatcaacaagatgcatcttcttttcagtagctcattccataagaactccacagttaagcgtgct 13150090  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    ||||||||||||||||||| |||||||||||||| | || |||  || ||||  ||| |||||| | ||||||||||||||| | || ||||||||||||    
T  13150089 tgacttggagcaattttggaatgggtgacctaccgggaagtttctcggtaagtgtgcaagtgaggacaaaacacgctgaaaagactcgtgttggtttgtg 13149990  T
Q  217 gggtcagtcgacaat 231  Q
    |||||||||||||||    
T  13149989 gggtcagtcgacaat 13149975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 18 - 231
Target Start/End: Complemental strand, 32227311 - 32227097
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||| ||||||| ||| |||||||||| ||||||||||||| ||    
T  32227311 gaaggaaggcttataagaattgttgggtactacctatattaacaagatgcatcttctttttggtagctcatttcataagaactccacagttaagcgtgct 32227212  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||||||||||||||||||||||||||||||| | || ||| ||| ||||  |||||||||| | |||||||  |||||| | || ||||||||||||    
T  32227211 tgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagtgtgcgagtgaggaaaaaacacattgaaaagactcgtgttggtttgtg 32227112  T
Q  217 gggtcagtcgacaat 231  Q
    |||||||||||||||    
T  32227111 gggtcagtcgacaat 32227097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 18 - 231
Target Start/End: Complemental strand, 32386824 - 32386610
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagcta-ttccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||| ||    
T  32386824 gaaggaaggcttataagaattgtttggtactacctatattaacaagatgcatcttcttttcagtagctaattccataagaactccacagttaagcgtgct 32386725  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||||||||||||||||||||||||||| ||| |||| |||   | ||||| | |||||||| | |||||||||| |||| | || ||||||||||||    
T  32386724 tgacttggagcaattttgggatgggtgacccaccggaaagtttcttggtaagcgtccgagtgaggacaaaacacgctaaaaagactcgtgttggtttgtg 32386625  T
Q  217 gggtcagtcgacaat 231  Q
    |||||||||| ||||    
T  32386624 gggtcagtcggcaat 32386610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 19 - 239
Target Start/End: Original strand, 14814006 - 14814227
Alignment:
Q  19 aaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagcta-ttccataagaacttcacagttaagcgtactt 117  Q
    |||||||||||| || ||||||||||||||||||||||||| |||||||||||||||||||||||||  ||||||||||||| ||||||||||||| |||    
T  14814006 aaggaaggcttataataattgtttggtactacctatatcaataagatgcatcttcttttcggtagctcgttccataagaactccacagttaagcgtgctt 14814105  T
Q  118 gacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtgg 217  Q
    ||||||||||||||||| |||||||||||||||  ||  ||| ||| ||||| |||||||||  | ||||||||||||||| | || |||||||||||||    
T  14814106 gacttggagcaattttgtgatgggtgacctaccgaaaggtttcccggtaagcgtgcgagtgaagacaaaacacgctgaaaagactcgtgttggtttgtgg 14814205  T
Q  218 ggtcagtcgacaatactaaaag 239  Q
    ||| ||||| ||||||| ||||    
T  14814206 ggttagtcggcaatactgaaag 14814227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 18 - 249
Target Start/End: Original strand, 37045091 - 37045320
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggta-gctattccataagaacttcacagttaagcgtact 116  Q
    ||||||| ||||| ||||||||||||||| |||||||||||||||| ||||||||||||| ||||  |||||||||||||||| ||||||||||||| ||    
T  37045091 gaaggaatgcttataagaattgtttggtaatacctatatcaacaaggtgcatcttctttttggtaccctattccataagaactccacagttaagcgtgct 37045190  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||||||| | | || |||||||||||||||| | |   || |||||||||||||||||||| | ||||||||||||||| | || |||||||||||     
T  37045191 tgacttggagtagtctttggatgggtgacctaccggga---ttcccgataagcatgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgta 37045287  T
Q  217 gggtcagtcgacaatactaaaagtcatctggga 249  Q
    ||||||||||||||| || |||||| |||||||    
T  37045288 gggtcagtcgacaatgcttaaagtcgtctggga 37045320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 21 - 249
Target Start/End: Original strand, 16810984 - 16811213
Alignment:
Q  21 ggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtacttga 119  Q
    |||||||||| ||||||||||  |||||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||| || |||||    
T  16810984 ggaaggcttataagaattgttgcgtactaactatatctacaagatgcatcttcttttcggtagctcattccataagaacttcacatttaagtgtgcttga 16811083  T
Q  120 cttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtgggg 219  Q
    |||| |||||||||||||||||||||||||| | || ||| ||  ||||| |||||||||| | |||| |||||||||| |||| |||||||||||||||    
T  16811084 cttgtagcaattttgggatgggtgacctaccgggaagtttccccgtaagcgtgcgagtgaggacaaaatacgctgaaaagattcgtgttggtttgtgggg 16811183  T
Q  220 tcagtcgacaatactaaaagtcatctggga 249  Q
    || |||| |||| || ||||  ||||||||    
T  16811184 tcggtcggcaatcctgaaagcaatctggga 16811213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 18 - 247
Target Start/End: Complemental strand, 4067450 - 4067220
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    |||||||| |||| || ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||||| ||||||||||||| ||    
T  4067450 gaaggaagacttataaaaattgtttggtactacctatatcaacaagatgcatcttctttttggtagctcattacataagaactccacagttaagcgtgct 4067351  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||||||| | | || |||||| ||||||||| |||| ||||| | ||||| ||| |||||| | ||||||||||||||| |    |||||||||||     
T  4067350 tgacttggagtagtctttggatggatgacctaccggaaagttttctggtaagcgtgcaagtgaggacaaaacacgctgaaaagaccagtgttggtttgta 4067251  T
Q  217 gggtcagtcgacaatactaaaagtcatctgg 247  Q
    |||||||||| |||| || |||||| |||||    
T  4067250 gggtcagtcggcaatgcttaaagtcgtctgg 4067220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 18 - 225
Target Start/End: Complemental strand, 20885207 - 20884999
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    |||||||| |||| |||||||||||| |||||||||||||||||||||||||||||||||  |||||  |||||||||||||| |||| |||||||| ||    
T  20885207 gaaggaagacttataagaattgtttgatactacctatatcaacaagatgcatcttctttttagtagcacattccataagaactccacaattaagcgtgct 20885108  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||||||| | | || |||||||||||||||| | |||||| ||| ||||| ||| ||| || | ||||||||||||||| | || |||||||||||     
T  20885107 tgacttggagtagtatttggatgggtgacctaccgggaaatttcccgttaagcgtgcaagttaggacaaaacacgctgaaaagactcgtgttggtttgta 20885008  T
Q  217 gggtcagtc 225  Q
    |||||||||    
T  20885007 gggtcagtc 20884999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 18 - 241
Target Start/End: Complemental strand, 25230338 - 25230114
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||| ||||||  |||| ||||||||| |||||||| |||| ||    
T  25230338 gaaggaaggcttataagaattatttggtactacctatatcaacaagatacatcttctttttggtagcccattcaataagaactccacagttatgcgtgct 25230239  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||||||| | | ||  ||||||||||||| ||| || ||||||| |||||  ||||||||| | |||||||| || ||| | |  |||||||||||     
T  25230238 tgacttggagtagtcttatgatgggtgacctatcaggaagttttccggtaagcgagcgagtgaggacaaaacacgttggaaagactagtgttggtttgta 25230139  T
Q  217 gggtcagtcgacaatactaaaagtc 241  Q
    ||||||||||||||| || ||||||    
T  25230138 gggtcagtcgacaatgcttaaagtc 25230114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 18 - 241
Target Start/End: Complemental strand, 25237925 - 25237701
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||| ||||||  |||| ||||||||| |||||||| |||| ||    
T  25237925 gaaggaaggcttataagaattatttggtactacctatatcaacaagatacatcttctttttggtagcccattcaataagaactccacagttatgcgtgct 25237826  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||||||| | | ||  ||||||||||||| ||| || ||||||| |||||  ||||||||| | |||||||| || ||| | |  |||||||||||     
T  25237825 tgacttggagtagtcttatgatgggtgacctatcaggaagttttccggtaagcgagcgagtgaggacaaaacacgttggaaagactagtgttggtttgta 25237726  T
Q  217 gggtcagtcgacaatactaaaagtc 241  Q
    ||||||||||||||| || ||||||    
T  25237725 gggtcagtcgacaatgcttaaagtc 25237701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 18 - 249
Target Start/End: Complemental strand, 25238774 - 25238542
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtag-ctattccataagaacttcacagttaagcgtact 116  Q
    |||||||| |||| |||||||||||||||||| || |||||||||||||||||||||||| ||||| | |||||||||||||| ||||||||||||| ||    
T  25238774 gaaggaagacttataagaattgtttggtactatctttatcaacaagatgcatcttctttttggtagcccattccataagaactccacagttaagcgtgct 25238675  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||||||| | | || |||| ||||||||| | | || ||||  | |||||||||||||||| | ||||||||||||||| | || |||||||||||     
T  25238674 tgacttggagtagtctttggattggtgacctatcgggaagttttttggtaagcatgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgta 25238575  T
Q  217 gggtcagtcgacaatactaaaagtcatctggga 249  Q
     |||| |||| ||||  | |||||| |||||||    
T  25238574 tggtcggtcggcaatggttaaagtcgtctggga 25238542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 18 - 241
Target Start/End: Original strand, 7493937 - 7494161
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtag-ctattccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||||| | |  ||||||||||| |||| |||||| | ||    
T  7493937 gaaggaaggcttataagaattttttggtactacttatatcaacaagatgcatcttcttttcggtagcccaaaccataagaactccacatttaagcatgct 7494036  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    ||||||||||   | || | |||| |||||| | || |||||| |||  |||| |||||||||||| ||| |||| |||||| | |||||||||| ||||    
T  7494037 tgacttggagttgtcttagcatggctgaccttctaggaaatttcccgtaaagcgtgcgagtgagaacaaagcacgttgaaaagactcatgttggtatgtg 7494136  T
Q  217 gggtcagtcgacaatactaaaagtc 241  Q
    ||||||||||||||| || ||||||    
T  7494137 gggtcagtcgacaattcttaaagtc 7494161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 18 - 240
Target Start/End: Original strand, 30529743 - 30529965
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtag-ctattccataagaacttcacagttaagcgtact 116  Q
    |||| |||||||| ||||||| |||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||||||| |||||||||| ||    
T  30529743 gaagtaaggcttataagaattttttggtactacctatatcaacaagatgcatcttctttttggtagcccattccataagaacttcatagttaagcgtgct 30529842  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||||||| | | || |||||||||||||| | | || ||| ||  |||||||||||||||| | |||||||||| |||| | |  ||||||||||      
T  30529843 tgacttggagtagtctttggatgggtgaccta-ctggaagtttcccagtaagcatgcgagtgaggacaaaacacgctaaaaagacttgtgttggtttgca 30529941  T
Q  217 gggtcagtcgacaatactaaaagt 240  Q
    |||| ||||| |||| || |||||    
T  30529942 gggttagtcggcaatgcttaaagt 30529965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 18 - 231
Target Start/End: Complemental strand, 25230795 - 25230581
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtag-ctattccataagaacttcacagttaagcgtact 116  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||| | ||||||||||||||  ||| |||||||| ||    
T  25230795 gaaggaaggtttataagaattgtttggtactacctatatcaacaagatgcattttctttttggtagcccattccataagaactcaacaattaagcgtgct 25230696  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||||||| | | ||  |||||||| |||||  | || ||| ||| ||||| |||||||||||  ||||||||||| ||| | || |||||||||||     
T  25230695 tgacttggagtagtcttatgatgggtgccctactgggaagtttcccggtaagcgtgcgagtgagatcaaaacacgctggaaagactcgtgttggtttgta 25230596  T
Q  217 gggtcagtcgacaat 231  Q
    ||||||||| |||||    
T  25230595 gggtcagtctacaat 25230581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 18 - 231
Target Start/End: Complemental strand, 25238382 - 25238168
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtag-ctattccataagaacttcacagttaagcgtact 116  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||| | ||||||||||||||  ||| |||||||| ||    
T  25238382 gaaggaaggtttataagaattgtttggtactacctatatcaacaagatgcattttctttttggtagcccattccataagaactcaacaattaagcgtgct 25238283  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||||||| | | ||  |||||||| |||||  | || ||| ||| ||||| |||||||||||  ||||||||||| ||| | || |||||||||||     
T  25238282 tgacttggagtagtcttatgatgggtgccctactgggaagtttcccggtaagcgtgcgagtgagatcaaaacacgctggaaagactcgtgttggtttgta 25238183  T
Q  217 gggtcagtcgacaat 231  Q
    ||||||||| |||||    
T  25238182 gggtcagtctacaat 25238168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 18 - 147
Target Start/End: Original strand, 29224380 - 29224510
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtag-ctattccataagaacttcacagttaagcgtact 116  Q
    |||||||| |||| ||||||||||||||||||||||||  |||||||||||||||||||||||||| | |  |||||||||||||||| |||||||| ||    
T  29224380 gaaggaagacttataagaattgtttggtactacctatactaacaagatgcatcttcttttcggtagcccaaaccataagaacttcacaattaagcgtgct 29224479  T
Q  117 tgacttggagcaattttgggatgggtgacct 147  Q
    |||||||||||||||||||||||||||||||    
T  29224480 tgacttggagcaattttgggatgggtgacct 29224510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 26 - 155
Target Start/End: Original strand, 41472364 - 41472494
Alignment:
Q  26 gcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtacttgacttgg 124  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| | |||||||||||||| ||| ||||| ||| |||||||||     
T  41472364 gcttataagaattgtttggtactacatatatcaacaagatgcatcttcttttcggtagatcattccataagaactccacggttaaacgtgcttgacttga 41472463  T
Q  125 agcaattttgggatgggtgacctaccagaaa 155  Q
    | |||||||||||||||||||||||| ||||    
T  41472464 aacaattttgggatgggtgacctaccggaaa 41472494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 19 - 239
Target Start/End: Original strand, 25248168 - 25248390
Alignment:
Q  19 aaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtag-ctattccataagaacttcacagttaagcgtactt 117  Q
    |||||| | ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||| |||| ||| ||| ||||| |||    
T  25248168 aaggaatgtttataagaattgtttggtactacctatatcaacaagatgcatcttctttttggtagcccattccataataactccacggttcagcgtgctt 25248267  T
Q  118 gacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaa-attcatgttggtttgtg 216  Q
    ||||||||| | | ||  ||||| ||||||||| | || |||  || ||||| |||||||||| | |||||||| ||||||| | || ||||| ||||||    
T  25248268 gacttggagtagtcttatgatggatgacctaccgggaagtttcacggtaagcgtgcgagtgaggacaaaacacgttgaaaaagactcgtgttgatttgtg 25248367  T
Q  217 gggtcagtcgacaatactaaaag 239  Q
     ||| |||||||||| |||||||    
T  25248368 aggttagtcgacaatcctaaaag 25248390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 18 - 241
Target Start/End: Original strand, 7477247 - 7477471
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtag-ctattccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| ||||||| ||||||||||| |||||||||||||| ||||||||||||||||| | |  ||||||||||| |||| |||||| | ||    
T  7477247 gaaggaaggcttataagaattttttggtactacttatatcaacaagatacatcttcttttcggtagcccaaaccataagaactccacatttaagcatgct 7477346  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||| ||| | | || |||||| ||||||    | ||||||  ||  |||| |||||||||||| ||| |||| |||||| | |||||||||| ||||    
T  7477347 tgacttagagtagtcttaggatggctgaccttatgggaaatttctcggaaagcgtgcgagtgagaacaaagcacgttgaaaagactcatgttggtatgtg 7477446  T
Q  217 gggtcagtcgacaatactaaaagtc 241  Q
    ||||||||||||||| || ||||||    
T  7477447 gggtcagtcgacaattcttaaagtc 7477471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 18 - 149
Target Start/End: Original strand, 39640993 - 39641125
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    |||||||| |||| |||| ||||||||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||| |||||||||||||  |    
T  39640993 gaaggaagacttataagagttgtttggtactacctatatcaataagatgcatcttctttttggtagctcattccataagaactccacagttaagcgtgtt 39641092  T
Q  117 tgacttggagcaattttgggatgggtgacctac 149  Q
    |||||||||||| | || |||| ||||||||||    
T  39641093 tgacttggagcagtctttggattggtgacctac 39641125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 21 - 241
Target Start/End: Complemental strand, 25802635 - 25802414
Alignment:
Q  21 ggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtag-ctattccataagaacttcacagttaagcgtacttga 119  Q
    |||||||| | |||||| ||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||||| | |||||||||||||  ||||    
T  25802635 ggaaggctgataagaatggtttggtactacctatatcaacaagatgcatcttcttttcgatagcccattccataagaaatccacagttaagcgtgtttga 25802536  T
Q  120 cttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtgggg 219  Q
    ||||||| | | || ||| ||||||||| | || || |||  ||| |||  ||||||| ||   ||||||||||||||| |    ||||||||||| |||    
T  25802535 cttggagtagtcttaggacgggtgaccttctaggaagtttctcgaaaagagtgcgagtaaggtcaaaacacgctgaaaagacgtgtgttggtttgtaggg 25802436  T
Q  220 tcagtcgacaatactaaaagtc 241  Q
    |||||| ||||| || ||||||    
T  25802435 tcagtcaacaatgcttaaagtc 25802414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 113
Target Start/End: Complemental strand, 25239167 - 25239071
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtag-ctattccataagaacttcacagttaagcgt 113  Q
    ||||||| ||||| ||||||| |||||||||||||||||||||||||||||||||||||| ||||| | |||||||||||||| |||||||||||||    
T  25239167 gaaggaacgcttataagaattttttggtactacctatatcaacaagatgcatcttctttttggtagcccattccataagaactccacagttaagcgt 25239071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 51 - 231
Target Start/End: Complemental strand, 53150869 - 53150688
Alignment:
Q  51 ctatatcaacaagatgcatcttcttttcggtagcta-ttccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacc-ta 148  Q
    |||||| |||||||||||| || ||||||||||| | || |||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||| ||    
T  53150869 ctatattaacaagatgcatatttttttcggtagccaatttcataagaacttcacagttaaccgtgcttaacttggagcaattttgggatgggtgacctta 53150770  T
Q  149 ccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 231  Q
      || || ||| || | ||||  ||||||||| | |||||| | |||||| | ||||||| |||||||||||||||| |||||    
T  53150769 tgag-aagtttcccaaaaagcgggcgagtgaggacaaaacatgttgaaaagactcatgttagtttgtggggtcagtcaacaat 53150688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 35 - 147
Target Start/End: Original strand, 2911168 - 2911281
Alignment:
Q  35 aattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaatttt 133  Q
    ||||||||| || |||||||||||||||||||||| ||||||| ||||||| |||||||||||||| ||||||||||||| |||||||||||| | | ||    
T  2911168 aattgtttgatattacctatatcaacaagatgcatattctttttggtagctcattccataagaactccacagttaagcgtgcttgacttggagtagtctt 2911267  T
Q  134 gggatgggtgacct 147  Q
     ||||| |||||||    
T  2911268 tggatgagtgacct 2911281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 19 - 155
Target Start/End: Original strand, 41474054 - 41474191
Alignment:
Q  19 aaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtactt 117  Q
    ||||||| |||| |||||||||||| |||| ||||||||||||||||  || ||||||| ||| | | |||| |||| |||| |||||| |||||| |||    
T  41474054 aaggaagacttataagaattgtttgatacttcctatatcaacaagattgatattctttttggtggatcattctataaaaactccacagtcaagcgtgctt 41474153  T
Q  118 gacttggagcaattttgggatgggtgacctaccagaaa 155  Q
    |||||||| ||||||||||||||||||| |||||||||    
T  41474154 gacttggaacaattttgggatgggtgacataccagaaa 41474191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 18 - 106
Target Start/End: Complemental strand, 32797025 - 32796936
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagc-tattccataagaacttcacagt 106  Q
    |||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||  |||||  |||||||||||||| ||||||    
T  32797025 gaagcaagacttataagaattgtttggtactacctatatcaacaagatgcatcttcttttttgtagcacattccataagaactccacagt 32796936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 233
Target Start/End: Original strand, 15405606 - 15405818
Alignment:
Q  22 gaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagcta-ttccataagaacttcacagttaagcgtacttgac 120  Q
    ||||||||| ||||||||||||||| ||||  || |||||||||||  ||||||||| ||||| |   |||| |||||| || ||||||  || ||||||    
T  15405606 gaaggcttataagaattgtttggtattaccggtaccaacaagatgccacttcttttcagtagccaggaccattagaactccaaagttaaatgtgcttgac 15405705  T
Q  121 ttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggt 220  Q
    ||||| ||||||||||||||||||||| |  | || |||||| | |||  ||| |||||| | ||| |||||||||| ||  | |||||||||||  |||    
T  15405706 ttggatcaattttgggatgggtgaccttctgggaagttttcctaaaagtgtgcaagtgaggacaaagcacgctgaaagaacccgtgttggtttgtaaggt 15405805  T
Q  221 cagtcgacaatac 233  Q
    ||| |||||||||    
T  15405806 caggcgacaatac 15405818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 22 - 233
Target Start/End: Original strand, 15392570 - 15392782
Alignment:
Q  22 gaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagcta-ttccataagaacttcacagttaagcgtacttgac 120  Q
    ||||||||| ||||||||||||||| ||||  || |||||||||||  ||||||||| ||||| |   |||| |||||| || ||||||  || ||||||    
T  15392570 gaaggcttataagaattgtttggtattaccggtaccaacaagatgccacttcttttcagtagccaggaccatcagaactccaaagttaaatgtgcttgac 15392669  T
Q  121 ttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggt 220  Q
    ||||| ||||||||||||||||||||| |  | || |||||| | |||  ||| |||||| | | | |||||||||| || || |||||||||||  |||    
T  15392670 ttggatcaattttgggatgggtgaccttctgggaagttttcctaaaagtgtgcaagtgaggacatagcacgctgaaagaactcgtgttggtttgtaaggt 15392769  T
Q  221 cagtcgacaatac 233  Q
     || |||||||||    
T  15392770 aaggcgacaatac 15392782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 32 - 147
Target Start/End: Complemental strand, 25803080 - 25802964
Alignment:
Q  32 aagaattgtttggtactacctatatcaacaagatgcatcttcttttcggta-gctattccataagaacttcacagttaagcgtacttgacttggagcaat 130  Q
    ||||||||||||||||||||||||  ||||||||| |||||||||||||||  | ||| |||||||||| |  |||||||||| |||||||||||  | |    
T  25803080 aagaattgtttggtactacctataaaaacaagatgtatcttcttttcggtatcccatttcataagaactccgtagttaagcgtgcttgacttggactagt 25802981  T
Q  131 tttgggatgggtgacct 147  Q
     || |||||||||||||    
T  25802980 cttaggatgggtgacct 25802964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 22 - 147
Target Start/End: Original strand, 15411015 - 15411141
Alignment:
Q  22 gaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagcta-ttccataagaacttcacagttaagcgtacttgac 120  Q
    ||||||||| ||||||||||||||| ||||  || |||||||||||  ||||||||| ||||| |   |||| |||||| || ||||||  || ||||||    
T  15411015 gaaggcttataagaattgtttggtattaccggtaccaacaagatgccacttcttttcagtagccaggaccattagaactccaaagttaaatgtgcttgac 15411114  T
Q  121 ttggagcaattttgggatgggtgacct 147  Q
    ||||| |||||||||||||||||||||    
T  15411115 ttggatcaattttgggatgggtgacct 15411141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 22 - 147
Target Start/End: Original strand, 15417431 - 15417557
Alignment:
Q  22 gaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagcta-ttccataagaacttcacagttaagcgtacttgac 120  Q
    ||||||||| ||||||||||||||| ||||  || |||||||||||  ||||||||| ||||| |   |||| |||||| || ||||||  || ||||||    
T  15417431 gaaggcttataagaattgtttggtattaccggtaccaacaagatgccacttcttttcagtagccaggaccattagaactccaaagttaaatgtgcttgac 15417530  T
Q  121 ttggagcaattttgggatgggtgacct 147  Q
    ||||| |||||||||||||||||||||    
T  15417531 ttggatcaattttgggatgggtgacct 15417557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 19 - 132
Target Start/End: Complemental strand, 31104049 - 31103933
Alignment:
Q  19 aaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct---attccataagaacttcacagttaagcgtac 115  Q
    ||||||| |||| |||||||||||| ||||| ||||| |||| |||||||| ||||||| |||||||   ||||||||||||||||||| ||||| ||      
T  31104049 aaggaagacttataagaattgtttgatactatctataccaactagatgcattttctttttggtagctctcattccataagaacttcacatttaagtgtct 31103950  T
Q  116 ttgacttggagcaattt 132  Q
    ||||||| ||| |||||    
T  31103949 ttgactttgagtaattt 31103933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 32 - 147
Target Start/End: Original strand, 3899870 - 3899986
Alignment:
Q  32 aagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagc-tattccataagaacttcacagttaagcgtacttgacttggagcaat 130  Q
    ||||||||||||||||||| |||| |||||||||||||||| ||||||  | |  |   |||||||||| |||| | |||| | ||||||||||||||||    
T  3899870 aagaattgtttggtactacatataccaacaagatgcatctttttttcgacaacacaaatcataagaactccacaataaagcatgcttgacttggagcaat 3899969  T
Q  131 tttgggatgggtgacct 147  Q
    ||||| |||||||||||    
T  3899970 tttggtatgggtgacct 3899986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 22 - 233
Target Start/End: Original strand, 15388203 - 15388415
Alignment:
Q  22 gaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctatt-ccataagaacttcacagttaagcgtacttgac 120  Q
    ||||||||| ||||||||||| ||| ||||  || |||||||||||  ||||||||| ||||| |   |||| |||||| || ||||||  || ||||||    
T  15388203 gaaggcttataagaattgtttcgtattaccagtaccaacaagatgccacttcttttcagtagccaggaccatcagaactccaaagttaaatgtgcttgac 15388302  T
Q  121 ttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggt 220  Q
    ||||| ||||||||||||||||||||| |  | || |||||| | |||  ||| |||||| | | | |||||||||| || || |||||||||||  |||    
T  15388303 ttggatcaattttgggatgggtgaccttctgggaagttttcctaaaagtgtgcaagtgaggacatagcacgctgaaagaactcgtgttggtttgtaaggt 15388402  T
Q  221 cagtcgacaatac 233  Q
     || |||||||||    
T  15388403 aaggcgacaatac 15388415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 147
Target Start/End: Original strand, 15377344 - 15377470
Alignment:
Q  22 gaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctatt-ccataagaacttcacagttaagcgtacttgac 120  Q
    ||||||||| ||||||||||||||| |||   || |||||||||||  ||||||||| ||| | |   |||| |||||| |||||||||  || ||||||    
T  15377344 gaaggcttataagaattgtttggtattactggtaccaacaagatgccacttcttttcagtacccaggaccattagaactccacagttaaatgtgcttgac 15377443  T
Q  121 ttggagcaattttgggatgggtgacct 147  Q
    ||||| |||||||||||||||||||||    
T  15377444 ttggatcaattttgggatgggtgacct 15377470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 32 - 144
Target Start/End: Complemental strand, 26310065 - 26309952
Alignment:
Q  32 aagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaat 130  Q
    ||||||| |||| |||||| |||| ||| ||||||||||||||||  ||||||| ||||||| ||||||  ||||||||  ||| |||||||  | ||||    
T  26310065 aagaattttttgttactacatataccaaaaagatgcatcttctttatggtagctcattccattagaactcgacagttaaatgtatttgacttaaaacaat 26309966  T
Q  131 tttgggatgggtga 144  Q
    ||||||||||||||    
T  26309965 tttgggatgggtga 26309952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 165 - 241
Target Start/End: Complemental strand, 25239069 - 25238993
Alignment:
Q  165 taagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtc 241  Q
    ||||| || ||||||| | ||||||||||||||| | || ||||||||||| ||||||||||||||| || ||||||    
T  25239069 taagcgtgtgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtagggtcagtcgacaatgcttaaagtc 25238993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 3890048 - 3890094
Alignment:
Q  32 aagaattgtttggtactacctatatcaacaagatgcatcttcttttc 78  Q
    |||||||||||| |||||| ||||||||||||||||||||| |||||    
T  3890048 aagaattgtttgctactacatatatcaacaagatgcatctttttttc 3890094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 231
Target Start/End: Original strand, 41473745 - 41473811
Alignment:
Q  165 taagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 231  Q
    ||||| |||||||||| | ||||||||||||||| |  | |||||||||||||||||||||| ||||    
T  41473745 taagcgtgcgagtgaggacaaaacacgctgaaaagacccgtgttggtttgtggggtcagtcgccaat 41473811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 52 - 114
Target Start/End: Complemental strand, 43736777 - 43736714
Alignment:
Q  52 tatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgta 114  Q
    ||||||||||| |||||||||||| | ||||||| ||| |||||||| ||||| ||||||||||    
T  43736777 tatatcaacaatatgcatcttcttgttggtagctcatttcataagaatttcactgttaagcgta 43736714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 143
Target Start/End: Original strand, 12762939 - 12763023
Alignment:
Q  59 acaagatgcatcttcttttcggtag-ctattccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtg 143  Q
    |||||||||||| |||||| ||||| |||  ||||| |||||  |||| |||  ||||||||||||||| ||||||||||||||||    
T  12762939 acaagatgcatcgtcttttaggtagcctaaaccataggaactcaacaggtaattgtacttgacttggag-aattttgggatgggtg 12763023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 215
Target Start/End: Original strand, 18318860 - 18318909
Alignment:
Q  166 aagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgt 215  Q
    |||| |||||||||||| ||||||||||||||| ||||  ||||||||||    
T  18318860 aagcgtgcgagtgagaacaaaacacgctgaaaagattcgggttggtttgt 18318909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 241
Target Start/End: Original strand, 2911288 - 2911364
Alignment:
Q  165 taagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtc 241  Q
    ||||| |||||||||| | |||||||| |||||| | || ||||||||||| || ||| |||||||| || ||||||    
T  2911288 taagcgtgcgagtgaggacaaaacacgttgaaaagactcgtgttggtttgtaggatcaatcgacaatgcttaaagtc 2911364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 141
Target Start/End: Original strand, 15381258 - 15381310
Alignment:
Q  89 ccataagaacttcacagttaagcgtacttgacttggagcaattttgggatggg 141  Q
    ||||||||||| |||| ||||| || ||||||||||| |||||||| ||||||    
T  15381258 ccataagaactccacatttaagtgtgcttgacttggatcaattttgagatggg 15381310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 141
Target Start/End: Original strand, 15396493 - 15396545
Alignment:
Q  89 ccataagaacttcacagttaagcgtacttgacttggagcaattttgggatggg 141  Q
    ||||||||||| |||| ||||| || ||||||||||| |||||||| ||||||    
T  15396493 ccataagaactccacatttaagtgtgcttgacttggatcaattttgagatggg 15396545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 141
Target Start/End: Original strand, 15410629 - 15410681
Alignment:
Q  89 ccataagaacttcacagttaagcgtacttgacttggagcaattttgggatggg 141  Q
    ||||||||||| |||| ||||| || ||||||||||| |||||||| ||||||    
T  15410629 ccataagaactccacatttaagtgtgcttgacttggatcaattttgagatggg 15410681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322 (Bit Score: 135; Significance: 2e-70; HSPs: 1)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 18 - 231
Target Start/End: Original strand, 19022 - 19236
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||| ||||||||||||| ||    
T  19022 gaaggaaggcttataagaattgtttggtactacctatatcaacaagattcatcttcttttcggtagctcatttcataagaactccacagttaagcgtgct 19121  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||||||||||||||||||||||||||||||| | || ||| ||| ||||| || ||||||| | ||||||||||||||| | || ||||||||||||    
T  19122 tgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagcgtgtgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtg 19221  T
Q  217 gggtcagtcgacaat 231  Q
    |||||||||| ||||    
T  19222 gggtcagtcggcaat 19236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 135; Significance: 2e-70; HSPs: 69)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 18 - 231
Target Start/End: Complemental strand, 7678706 - 7678492
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| || ||    
T  7678706 gaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttcttttcggtagcttattccataagaactccacagttaagtgtgct 7678607  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||||||||||||||||||||||||||||||| | || ||| ||| ||||  |||||||||| | ||||||||||||||| | || ||| ||||||||    
T  7678606 tgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagtgtgcgagtgaggacaaaacacgctgaaaagactcgtgtaggtttgtg 7678507  T
Q  217 gggtcagtcgacaat 231  Q
    |||||||||||||||    
T  7678506 gggtcagtcgacaat 7678492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 18 - 241
Target Start/End: Complemental strand, 44471409 - 44471185
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    |||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||    
T  44471409 gaaggaagacttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgct 44471310  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    ||| |||||||||||||||||||||||||||||| | |||||| ||| |||||  ||||||||| | |||||| |||| ||| | || |||||||||||     
T  44471309 tgatttggagcaattttgggatgggtgacctaccgggaaatttcccggtaagcgggcgagtgaggacaaaacatgctggaaagactcgtgttggtttgta 44471210  T
Q  217 gggtcagtcgacaatactaaaagtc 241  Q
    ||||||||||||||| || ||||||    
T  44471209 gggtcagtcgacaattcttaaagtc 44471185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 18 - 231
Target Start/End: Original strand, 49998692 - 49998906
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    |||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||  |    
T  49998692 gaaggaagacttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgtt 49998791  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||||||||||||||||||||||||||||||| | || ||| ||| ||||  |||||||||| | ||||||||||||||| | || ||||||||||||    
T  49998792 tgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagtgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtg 49998891  T
Q  217 gggtcagtcgacaat 231  Q
    ||| |||||| ||||    
T  49998892 gggacagtcggcaat 49998906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 18 - 218
Target Start/End: Complemental strand, 4127973 - 4127772
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagcta-ttccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||| |||||||||| ||    
T  4127973 gaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagccaattccataagaacttcagagttaagcgtgct 4127874  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    || ||| |||||||||||||||||||||||||||  ||| ||||||| ||||| || ||||||| | ||||||||||||||| | || ||||||||||||    
T  4127873 tggcttagagcaattttgggatgggtgacctaccgaaaagttttccggtaagcgtgtgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtg 4127774  T
Q  217 gg 218  Q
    ||    
T  4127773 gg 4127772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 18 - 231
Target Start/End: Original strand, 35871684 - 35871897
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| | |||||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||| ||    
T  35871684 gaaggaaggcttatatgaattgtttggtaccacctatatcaacaagatgcat-ttcttttcggtagctcattccataagaactccacagttaagcgtgct 35871782  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||||||||||||||||||||||||||||| | |||| ||| ||| ||| | |||||||||| | ||||||||||||||| | || ||||||||||||    
T  35871783 tgacttggagcaattttgggatgggtgacctatcggaaagtttcccggtaaacgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtg 35871882  T
Q  217 gggtcagtcgacaat 231  Q
    || ||||||| ||||    
T  35871883 ggatcagtcggcaat 35871897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 18 - 193
Target Start/End: Complemental strand, 12692083 - 12691907
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||    
T  12692083 gaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgct 12691984  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgct 193  Q
    |||||||||||||||||||||||||||||||||  | || ||| ||| ||||| |||||||||| | ||||||||||    
T  12691983 tgacttggagcaattttgggatgggtgacctactgggaagtttcccggtaagcgtgcgagtgaggacaaaacacgct 12691907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 22 - 248
Target Start/End: Complemental strand, 44470954 - 44470728
Alignment:
Q  22 gaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtacttgac 120  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| || || |||||||||||||| ||||||||||||| ||||||    
T  44470954 gaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttctgttcg-taactcattccataagaactccacagttaagcgtgcttgac 44470856  T
Q  121 ttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggt 220  Q
    |||||||||||||||||||| ||||||||| | || ||| ||| ||||| |||||||||| | ||||||||||| ||| | || ||||||||||| ||||    
T  44470855 ttggagcaattttgggatggttgacctaccgggaagtttcccggtaagcgtgcgagtgaggacaaaacacgctggaaagactcgtgttggtttgtagggt 44470756  T
Q  221 cagtcgacaatactaaaagtcatctggg 248  Q
    ||||| ||||| || |||||| ||||||    
T  44470755 cagtcaacaattcttaaagtcgtctggg 44470728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 18 - 231
Target Start/End: Complemental strand, 23350367 - 23350153
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||||||| |||||||||| ||    
T  23350367 gaaggaaggcttataagaattgtttggtacttcctatatcaacaagatgcatcttcttttcggtagctccttccataagaacttcatagttaagcgtgct 23350268  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttc-cgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgt 215  Q
    |||||||||||||||||||||||| ||||||||| || || |||| |  ||||| || ||||||| | ||||||| ||||||| | || |||||||||||    
T  23350267 tgacttggagcaattttgggatggatgacctacc-gagaagtttctctgtaagcgtgtgagtgaggacaaaacacactgaaaagactcgtgttggtttgt 23350169  T
Q  216 ggggtcagtcgacaat 231  Q
    ||||||||||| ||||    
T  23350168 ggggtcagtcggcaat 23350153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 19 - 231
Target Start/End: Complemental strand, 24629516 - 24629306
Alignment:
Q  19 aaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtactt 117  Q
    |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||| | ||||||||||||| |||    
T  24629516 aaggaatgcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtacctcgttccataagaattccacagttaagcgtgctt 24629417  T
Q  118 gacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtgg 217  Q
    ||||||||||||||||||||||||||||||||| | |||    ||| ||||| |||||||||| | ||||||||||||||| | || |||| ||||||||    
T  24629416 gacttggagcaattttgggatgggtgacctaccgggaaa---cccggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttagtttgtgg 24629320  T
Q  218 ggtcagtcgacaat 231  Q
    ||||||||| ||||    
T  24629319 ggtcagtcggcaat 24629306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 18 - 249
Target Start/End: Complemental strand, 23943326 - 23943094
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    |||||||| |||| || || | |||||||||||||||||||||||||||||||||||||| ||||||  |||||||||||||| ||||||||||||| ||    
T  23943326 gaaggaagacttataaaaaatatttggtactacctatatcaacaagatgcatcttctttttggtagcacattccataagaactccacagttaagcgtgct 23943227  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||||||| | | || |||||||||||| ||| | || ||| ||| ||||| |||||||||| | ||||||||||||||| | || |||||||||||     
T  23943226 tgacttggagtagtctttggatgggtgaccaaccgggaagtttcccggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgta 23943127  T
Q  217 gggtcagtcgacaatactaaaagtcatctggga 249  Q
    ||||||||||||||| || |||||| |||||||    
T  23943126 gggtcagtcgacaatgcttaaagtcgtctggga 23943094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 18 - 231
Target Start/End: Complemental strand, 50398622 - 50398408
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || |||||||||| ||    
T  50398622 gaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccatagttaagcgtgct 50398523  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||||||| | | ||  ||||||||||||||| | || ||| ||| ||||| |||||||||| | |||| || ||| ||| | || |||||||||||     
T  50398522 tgacttggagtattcttatgatgggtgacctaccgggaagtttaccggtaagcgtgcgagtgaggacaaaatacactggaaagactcgtgttggtttgta 50398423  T
Q  217 gggtcagtcgacaat 231  Q
    |||||||||| ||||    
T  50398422 gggtcagtcggcaat 50398408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 32 - 196
Target Start/End: Complemental strand, 50814895 - 50814730
Alignment:
Q  32 aagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaat 130  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||||||||||||||||    
T  50814895 aagaattgtttggtactatctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaat 50814796  T
Q  131 tttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaa 196  Q
    |||||||||| ||||||||| | || ||| ||| ||| | |||||||||| | |||||||||||||    
T  50814795 tttgggatggatgacctaccgggaagtttcccggtaaacgtgcgagtgaggacaaaacacgctgaa 50814730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 24 - 150
Target Start/End: Complemental strand, 24629055 - 24628928
Alignment:
Q  24 aggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagcta-ttccataagaacttcacagttaagcgtacttgactt 122  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||| ||||||||||||| ||||||||    
T  24629055 aggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcagtagctcgttccataagaactccacagttaagcgtgcttgactt 24628956  T
Q  123 ggagcaattttgggatgggtgacctacc 150  Q
    ||||||||||||||||||||||||||||    
T  24628955 ggagcaattttgggatgggtgacctacc 24628928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 18 - 241
Target Start/End: Complemental strand, 1645833 - 1645609
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtag-ctattccataagaacttcacagttaagcgtact 116  Q
    |||||||| |||| ||||||||||||||| |||||||||||||||||||||||||||||| ||||| | |||||||||||||| ||||||||||||| ||    
T  1645833 gaaggaagacttataagaattgtttggtattacctatatcaacaagatgcatcttctttttggtagcccattccataagaactccacagttaagcgtgct 1645734  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||||||| | | || |||||||||||||||||| || |||     ||||| |||||||||| | |||||||| |||||| | || |||||||||||     
T  1645733 tgacttggagtagtctttggatgggtgacctaccaggaagtttctttgtaagcgtgcgagtgaggacaaaacacgttgaaaagactcgtgttggtttgta 1645634  T
Q  217 gggtcagtcgacaatactaaaagtc 241  Q
    |||||||| | |||| || ||||||    
T  1645633 gggtcagttggcaatgcttaaagtc 1645609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 18 - 240
Target Start/End: Complemental strand, 51331365 - 51331144
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||| |||||||||| ||||||||||||| ||    
T  51331365 gaaggaaggcttataagaattgtttggtactatctatatcaacaagatacatcttcttttcggtagctcatttcataagaactccacagttaagcgtgct 51331266  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||||||| | | ||  ||||||||||||||| | ||||||| |||||||| ||||| |||| | ||||||| ||| ||| | || | || ||||||     
T  51331265 tgacttggagtattcttatgatgggtgacctaccgggaaatttt-cgataagcgtgcgaatgaggacaaaacacactg-aaagactcgtattagtttgta 51331168  T
Q  217 gggtcagtcgacaatactaaaagt 240  Q
    |||||||||| |||| ||||||||    
T  51331167 gggtcagtcggcaatcctaaaagt 51331144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 27 - 239
Target Start/End: Original strand, 1464212 - 1464424
Alignment:
Q  27 cttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtacttgacttgga 125  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| || ||||| ||| |||||||    
T  1464212 cttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcatttcataagaacttcacaatttagcgtgcttaacttgga 1464311  T
Q  126 gcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtc 225  Q
    |||||||||||||||||||||| |    || |||||| | || | ||||||| || | | ||||||||| ||||| || ||||| ||||||||||| |||    
T  1464312 gcaattttgggatgggtgaccttctgagaagttttccaaaaaacgtgcgagttaggacacaacacgctg-aaaaactcgtgttgatttgtggggtcggtc 1464410  T
Q  226 gacaatactaaaag 239  Q
    || ||| |||||||    
T  1464411 gataatcctaaaag 1464424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 18 - 241
Target Start/End: Original strand, 3169262 - 3169486
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    |||||||| |||| || ||||||||||||||||||||||||||||||||||||||||||| |||| |  | |||||||||||| |||| |||||||| ||    
T  3169262 gaaggaagacttataaaaattgtttggtactacctatatcaacaagatgcatcttctttttggtaacccaatccataagaactccacacttaagcgtgct 3169361  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||||||| | | || ||||| ||||||||||||||| |||   | ||||| |||||||||| | |||||||| |||||| | || |||||||||||     
T  3169362 tgacttggagtagtctttggatgagtgacctaccagaaagtttcttggtaagcgtgcgagtgaggacaaaacacgttgaaaatactcgtgttggtttgta 3169461  T
Q  217 gggtcagtcgacaatactaaaagtc 241  Q
    |||||||| | ||||||| ||||||    
T  3169462 gggtcagttggcaatacttaaagtc 3169486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 18 - 249
Target Start/End: Original strand, 21067790 - 21068019
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtag-ctattccataagaacttcacagttaagcgtact 116  Q
    |||||||| |||| |||||||||||||| ||||||||||||||||||| ||| || ||   ||||| | |||||||||||||||||||||||||||| ||    
T  21067790 gaaggaagacttataagaattgtttggtgctacctatatcaacaagatacattttttt---ggtagtccattccataagaacttcacagttaagcgtgct 21067886  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    ||||||| || | | || |||||||||||||||| | || ||| ||| ||| | |||||||||| | ||||||| |||||||||||| |||||||||||     
T  21067887 tgacttgaagtagtctttggatgggtgacctaccgggaagtttaccggtaaacgtgcgagtgaggacaaaacacactgaaaaaattcgtgttggtttgta 21067986  T
Q  217 gggtcagtcgacaatactaaaagtcatctggga 249  Q
    || | ||||| |||| || ||||||||||||||    
T  21067987 ggcttagtcggcaatgcttaaagtcatctggga 21068019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 18 - 231
Target Start/End: Complemental strand, 50399077 - 50398864
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||  |    
T  50399077 gaaggaaggcttataagaattgtttggtactacctatatcaacacgatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgtt 50398978  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||||||| | | ||  ||||||||||||||| |  || || ||| ||| | ||| |||||| | |||||||| || ||| | || |||||||||||     
T  50398977 tgacttggagtattcttatgatgggtgacctaccggggaa-ttcccggtaaacgtgcaagtgaggacaaaacacgttggaaagactcgtgttggtttgta 50398879  T
Q  217 gggtcagtcgacaat 231  Q
    |||||||||| ||||    
T  50398878 gggtcagtcggcaat 50398864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 22 - 249
Target Start/End: Complemental strand, 9423938 - 9423710
Alignment:
Q  22 gaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtacttgac 120  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||||||||||   |||||  |||||||||||| |||||| ||||| || |||||     
T  9423938 gaaggcttataataattgtttggtactacctatatcaacaagatgcatcttctttctagtagcccattccataagaatttcacaattaagtgtgcttgaa 9423839  T
Q  121 ttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggt 220  Q
    |||||| | | || |||||||||||||||| | |||||| ||| |||||||||||||||| | ||||||||||||||| | || ||||||| |||  |||    
T  9423838 ttggagtagtcttaggatgggtgacctaccgggaaatttcccgttaagcatgcgagtgaggacaaaacacgctgaaaagactcgtgttggtgtgtacggt 9423739  T
Q  221 cagtcgacaatactaaaagtcatctggga 249  Q
    | || | |||| || |||||||| |||||    
T  9423738 ccgttggcaatgcttaaagtcatttggga 9423710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 18 - 149
Target Start/End: Complemental strand, 21220415 - 21220283
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| || |||| ||||||||| |||||||||||||  |    
T  21220415 gaaggaatgcttataagaattgtttggtactacctatatcaacaagatgcatcttctttttggtaactcattctataagaactacacagttaagcgtgtt 21220316  T
Q  117 tgacttggagcaattttgggatgggtgacctac 149  Q
    ||||||||||||||||||||| |||||||||||    
T  21220315 tgacttggagcaattttgggacgggtgacctac 21220283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 18 - 197
Target Start/End: Complemental strand, 23942873 - 23942693
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagc-tattccataagaacttcacagttaagcgtact 116  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||  |||||  |||||||||||||| ||||||||||||| ||    
T  23942873 gaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttttgtagcacattccataagaactccacagttaagcgtgct 23942774  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaa 197  Q
    |||||||||| | | || |||||| ||||||||| |||| ||| |  |||||| |||||||||| | |||||||| |||||    
T  23942773 tgacttggagtagtctttggatggatgacctaccggaaagtttccaaataagcgtgcgagtgaggacaaaacacgttgaaa 23942693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 18 - 224
Target Start/End: Original strand, 27026559 - 27026765
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtag-ctattccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||||||||||| |||| ||||| | |||||||||||||| |  |||||||||| ||    
T  27026559 gaaggaaggcttataagaattgtttgatactacctatatcaacaagatgcatctt-tttttggtagcccattccataagaactacgtagttaagcgtgct 27026657  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    ||||||| ||||||||||||| ||||||||| | || || ||| || | |||| || || |||| | ||||||||||||||| | || |||| |||||||    
T  27026658 tgacttgaagcaattttgggaagggtgaccttctaggaagtttaccaaaaagcgtgtgactgaggaaaaaacacgctgaaaagactcgtgtttgtttgtg 27026757  T
Q  217 gggtcagt 224  Q
    ||| ||||    
T  27026758 gggccagt 27026765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 18 - 231
Target Start/End: Complemental strand, 4127521 - 4127288
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct--------------------attccataagaa 97  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||                     |||||||||||    
T  4127521 gaaggaagacttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttccataagaa 4127422  T
Q  98 cttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaa 197  Q
    || ||||||||||| |  ||| ||||||||||||||||||||||||| ||| | | || ||| ||| ||||| || ||||||| | ||||||||||||||    
T  4127421 ctccacagttaagcatgattggcttggagcaattttgggatgggtgagctatcgggaagtttcccggtaagcgtgtgagtgaggacaaaacacgctgaaa 4127322  T
Q  198 aaattcatgttggtttgtggggtcagtcgacaat 231  Q
    | | || |||||||||||||||||||||| ||||    
T  4127321 agactcgtgttggtttgtggggtcagtcggcaat 4127288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 18 - 231
Target Start/End: Complemental strand, 14572234 - 14572024
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtag-ctattccataagaacttcacagttaagcgtact 116  Q
    ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||  ||||||||||| ||||   |||||| ||    
T  14572234 gaagggaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc-tttcggtagcctaaaccataagaactccaca---aagcgtgct 14572139  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||| ||||||||||| |||||||||||| |  | || |||  ||  |||| || ||||||| | |||||||| |||||| | || |||||||||| |    
T  14572138 tgacttagagcaattttgagatgggtgaccttctgggaagtttctcggaaagcgtgtgagtgaggacaaaacacggtgaaaagactcgtgttggtttgcg 14572039  T
Q  217 gggtcagtcgacaat 231  Q
    |||||||||| ||||    
T  14572038 gggtcagtcggcaat 14572024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 18 - 249
Target Start/End: Original strand, 21067338 - 21067570
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    |||||||| || | || |||| ||||||||||| ||||||||||||||||||||||||| |||||||| |||| | ||| ||| |||| |||||||| ||    
T  21067338 gaaggaagactaataataattatttggtactacatatatcaacaagatgcatcttctttccggtagctcattctaaaagtactccacaattaagcgtgct 21067437  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||||||| | | || ||| |||||||||||| |||| |||  || ||||| |||||||| | | ||||||| ||||||| | || |||| ||||||     
T  21067438 tgacttggagtagtctttggaggggtgacctaccggaaagtttctcggtaagcgtgcgagtggggacaaaacacactgaaaagactcgtgttagtttgtt 21067537  T
Q  217 gggtcagtcgacaatactaaaagtcatctggga 249  Q
    ||||||||| ||||| || |||||| |||||||    
T  21067538 gggtcagtccacaatgcttaaagtcgtctggga 21067570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 32 - 231
Target Start/End: Complemental strand, 27578527 - 27578327
Alignment:
Q  32 aagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaat 130  Q
    ||||||| |||||| |||||||||||||||||||||||||||||||||||| |  |  ||||||||||| || |||||||||| |||||||| || ||||    
T  27578527 aagaattatttggtgctacctatatcaacaagatgcatcttcttttcggtatcccaaaccataagaactccatagttaagcgtgcttgacttcgaacaat 27578428  T
Q  131 tttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaa 230  Q
    ||||||||| | ||||| |  | || |||||||| |||| |||||||||| | ||||||||| ||||| | || || ||||||||||| |||||| ||||    
T  27578427 tttgggatgagcgaccttctgggaagttttccgacaagcgtgcgagtgaggacaaaacacgcagaaaagactcgtgatggtttgtgggatcagtcaacaa 27578328  T
Q  231 t 231  Q
    |    
T  27578327 t 27578327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 18 - 147
Target Start/End: Complemental strand, 31817936 - 31817806
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtag-ctattccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||| | ||| ||||||||||||| |||||||||| ||    
T  31817936 gaaggaaggcttataagaattgttcggtactacctataccaacaagatgcatcttcttttcggtagtccatttcataagaacttcatagttaagcgtgct 31817837  T
Q  117 tgacttggagcaattttgggatgggtgacct 147  Q
    ||||||| || | |||| ||||||| |||||    
T  31817836 tgacttgtagtagttttaggatgggcgacct 31817806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 32 - 249
Target Start/End: Original strand, 33764930 - 33765148
Alignment:
Q  32 aagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaat 130  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||  |||||| |||  |||||||||||||| |||||||| ||||| ||||| ||||    
T  33764930 aagaattgtttggtgctacctataccaacaagatgcatcttcttttttgtagctcattttataagaacttcacacttaagcgtgcttgatttggatcaat 33765029  T
Q  131 tttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaa 230  Q
    ||||||||||||||| | | || |  |||| | | ||||||| ||| |||   ||||||| || |||| | || |||||||||||| ||||| |||||||    
T  33765030 tttgggatgggtgactttctaggagttttttcaaaaagcatgtgagcgaggtcaaaacacactaaaaagactcgtgttggtttgtgaggtcaatcgacaa 33765129  T
Q  231 tactaaaagtcatctggga 249  Q
    | || |||||||| |||||    
T  33765130 tgcttaaagtcatatggga 33765148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 40 - 140
Target Start/End: Complemental strand, 15306153 - 15306052
Alignment:
Q  40 tttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggat 138  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| |||||||| ||||||| |||||||    
T  15306153 tttggtactacctatataaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgactttgagcaatcttgggat 15306054  T
Q  139 gg 140  Q
    ||    
T  15306053 gg 15306052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 18 - 224
Target Start/End: Complemental strand, 8467884 - 8467690
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctattccataagaacttcacagttaagcgtactt 117  Q
    |||||||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||    ||   |||||| ||||||||||||| |||    
T  8467884 gaaggaagacttataagaattgtttggtactacctataccaacaagatgcatcttcttttcggtagc----cc---agaactccacagttaagcgtgctt 8467792  T
Q  118 gacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtgg 217  Q
    |||||||||||||||     ||||||||||    | || |||  ||  ||||||||||||||| | |||||||| |||||| | || |||||||||||||    
T  8467791 gacttggagcaattt-----tgggtgaccttatgggaagtttctcggaaagcatgcgagtgaggacaaaacacgttgaaaagactcgtgttggtttgtgg 8467697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 18 - 147
Target Start/End: Original strand, 17628567 - 17628697
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtag-ctattccataagaacttcacagttaagcgtact 116  Q
    ||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| ||| | |  ||||||||| | ||||||| ||||| |     
T  17628567 gaaggtaggcttataagaattgtttggtactacctataccaacaagatgcatcttcttttcgatagcccaacccataagaattccacagttgagcgtgcc 17628666  T
Q  117 tgacttggagcaattttgggatgggtgacct 147  Q
    |||||||||||||||||| ||||||||||||    
T  17628667 tgacttggagcaattttgagatgggtgacct 17628697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 18 - 225
Target Start/End: Original strand, 14351851 - 14352059
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggta-gctattccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||  |||| || |||||||||| ||||||||||||||||||||||||||| ||||  |||||||||||||||| |||||||||||||  |    
T  14351851 gaaggaaggcttgtaagagttttttggtactatctatatcaacaagatgcatcttctttttggtatcctattccataagaactccacagttaagcgtgtt 14351950  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||| ||| | | || |||||| ||||||||   ||| ||||||  ||||| ||| |||||  | |||| | |||||||| | ||||||||||||||     
T  14351951 tgacttcgagtagtctttggatggatgacctactgcaaagttttccagtaagcgtgcaagtgaagacaaaatatgctgaaaagactcatgttggtttgta 14352050  T
Q  217 gggtcagtc 225  Q
     ||||||||    
T  14352051 tggtcagtc 14352059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 18 - 138
Target Start/End: Complemental strand, 43929047 - 43928927
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctattccataagaacttcacagttaagcgtactt 117  Q
    ||||||| ||||| ||||||||||||||||||| |||| ||||||||||||||||||||| ||||| |||| |||||||| | |||| |||| ||| |||    
T  43929047 gaaggaaagcttacaagaattgtttggtactacatataccaacaagatgcatcttctttttggtagttatttcataagaaatccacaattaaacgtgctt 43928948  T
Q  118 gacttggagcaattttgggat 138  Q
    ||||| |||||||||||||||    
T  43928947 gactttgagcaattttgggat 43928927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 18 - 231
Target Start/End: Original strand, 13266142 - 13266356
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| || |||| ||| ||||| |||||||||| |||||||||||| |||||||||||  |   || ||||||  ||||||||||||| ||    
T  13266142 gaaggaaggcttataataattttttagtactccctatatcaataagatgcatcttattttcggtagcccaaatcacaagaaccccacagttaagcgtgct 13266241  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||| ||| |||||| |||||||||||||    | || |||||||| |||  |||||||||| | |||||| | |||||| | |  ||||||||||||    
T  13266242 tgactttgagaaattttaggatgggtgaccttttgggaagttttccgaaaagtgtgcgagtgaggagaaaacatgttgaaaagacttgtgttggtttgtg 13266341  T
Q  217 gggtcagtcgacaat 231  Q
    |||||||||||||||    
T  13266342 gggtcagtcgacaat 13266356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 126
Target Start/End: Complemental strand, 53996199 - 53996090
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||| ||||| || ||||||||||||||||||||||||||||||| ||||||||||| |||| || |||||||||||||| |||||||||| || ||    
T  53996199 gaaggaatgcttataaaaattgtttggtactacctatatcaacaagattcatcttctttttggtatctcattccataagaactccacagttaagtgtgct 53996100  T
Q  117 tgacttggag 126  Q
    ||||||||||    
T  53996099 tgacttggag 53996090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 26 - 120
Target Start/End: Complemental strand, 14571797 - 14571702
Alignment:
Q  26 gcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtag-ctattccataagaacttcacagttaagcgtacttgac 120  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||  ||||||||||| ||||||||||||| ||||||    
T  14571797 gcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcagtagcctaaaccataagaactccacagttaagcgtgcttgac 14571702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 35 - 144
Target Start/End: Complemental strand, 23091578 - 23091468
Alignment:
Q  35 aattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaatttt 133  Q
    |||||||||||||||| ||||| |||||||||||||||||||  ||||||| |||| |||| |||| ||||||||||| | ||||||||| |||||||||    
T  23091578 aattgtttggtactacatatattaacaagatgcatcttctttctggtagcttattctataaaaactccacagttaagcatgcttgacttgtagcaatttt 23091479  T
Q  134 gggatgggtga 144  Q
    |||||||||||    
T  23091478 gggatgggtga 23091468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 27029333 - 27029426
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtag-ctattccataagaacttcacagttaag 110  Q
    |||||||| |||| ||||||| ||||||||||| |||||||||||||||||||||||||||||||| | |||||||||||||| ||||||||||    
T  27029333 gaaggaagacttataagaattatttggtactacttatatcaacaagatgcatcttcttttcggtagcccattccataagaactccacagttaag 27029426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 22 - 212
Target Start/End: Complemental strand, 20306241 - 20306051
Alignment:
Q  22 gaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggta-gctattccataagaacttcacagttaagcgtacttgac 120  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||||   |||||| ||||  | ||| |||||||||| ||| ||||||||| ||||||    
T  20306241 gaaggcttataagaattgtttggtactatctatatcaacaagatgca---tctttttggtatcccatttcataagaactacacggttaagcgtgcttgac 20306145  T
Q  121 ttggagcaattttgggatgggtgacctac--cagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtt 212  Q
    |||||||||||||  |||||||| |||||   || || ||| |||| || | ||| |||||| | ||||||| ||||||| || ||||||||||    
T  20306144 ttggagcaatttttagatgggtgccctactataggaagtttcccgaaaaacgtgcaagtgaggacaaaacactctgaaaagatccatgttggtt 20306051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 32 - 142
Target Start/End: Original strand, 17028944 - 17029055
Alignment:
Q  32 aagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaat 130  Q
    |||||||||| ||| ||||||||||||||||||||| |||| ||||   ||||| ||||||||||||||||| ||||||| || ||||||||||||||||    
T  17028944 aagaattgttaggtgctacctatatcaacaagatgcgtcttattttacctagcttattccataagaacttcatagttaagagtgcttgacttggagcaat 17029043  T
Q  131 tttgggatgggt 142  Q
    || |||||||||    
T  17029044 ttcgggatgggt 17029055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 22 - 147
Target Start/End: Complemental strand, 27578989 - 27578863
Alignment:
Q  22 gaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctat-tccataagaacttcacagttaagcgtacttgac 120  Q
    |||| |||| ||||||||||||||||||| ||||||||  |||  |||||||||||| |||||  | |||||||||||| ||||||||||||| ||| ||    
T  27578989 gaagacttataagaattgtttggtactacatatatcaattagacacatcttcttttcagtagccctatccataagaactacacagttaagcgtgcttaac 27578890  T
Q  121 ttggagcaattttgggatgggtgacct 147  Q
    ||||||| ||||||||||| |||||||    
T  27578889 ttggagcgattttgggatgcgtgacct 27578863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 35 - 147
Target Start/End: Original strand, 17029403 - 17029516
Alignment:
Q  35 aattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaatttt 133  Q
    |||||||| |||||||||||||||||||||||||| ||  ||| |||| || |||||||||||||| |||||||||| || ||| |||||||||| ||||    
T  17029403 aattgtttagtactacctatatcaacaagatgcatattacttttggtaccttattccataagaactccacagttaagagtgcttaacttggagcattttt 17029502  T
Q  134 gggatgggtgacct 147  Q
    ||| ||||||||||    
T  17029503 gggttgggtgacct 17029516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 150
Target Start/End: Complemental strand, 29628751 - 29628619
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtag-ctattccataagaacttcacagttaagcgtact 116  Q
    |||||||| |||| |||||||||||||||||||||||||||||||||||  |||| | || ||||| | |||||||||||||| |||||||||||||  |    
T  29628751 gaaggaagacttataagaattgtttggtactacctatatcaacaagatgtgtctt-tgtttggtagcccattccataagaactccacagttaagcgtgtt 29628653  T
Q  117 tgacttggagcaattttgggatgggtgacctacc 150  Q
    |||||||||| | | || ||||||||||| ||||    
T  29628652 tgacttggagtagtctttggatgggtgacttacc 29628619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 32 - 147
Target Start/End: Original strand, 4185785 - 4185901
Alignment:
Q  32 aagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaat 130  Q
    |||||||||||| ||| || |||| ||||||||||||||||||||| ||||||| |||| | |||||||  |||||||||  | ||||||||||||||||    
T  4185785 aagaattgtttgataccacatataccaacaagatgcatcttctttttggtagctcattctacaagaactctacagttaagtatgcttgacttggagcaat 4185884  T
Q  131 tttgggatgggtgacct 147  Q
    |||||||| ||||||||    
T  4185885 tttgggataggtgacct 4185901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 27 - 125
Target Start/End: Complemental strand, 13613972 - 13613874
Alignment:
Q  27 cttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtacttgacttgga 125  Q
    |||| |||||||||||| ||| ||||||||||||||||||||||||| ||||||||| | |||| ||||||||| |||||||||||||  ||||||||||    
T  13613972 cttataagaattgtttgataccacctatatcaacaagatgcatcttc-tttcggtagttcattctataagaactccacagttaagcgtgtttgacttgga 13613874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 32 - 233
Target Start/End: Complemental strand, 52048736 - 52048545
Alignment:
Q  32 aagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctattccataagaacttcacagttaagcgtacttgacttggagcaatt 131  Q
    |||||||||||| |||||| ||||  |||||||||||||||| ||| |  ||  |||||||||||||| |||||||||         |||||||||||||    
T  52048736 aagaattgtttgatactacgtatactaacaagatgcatcttcattttgtaagtcattccataagaactccacagttaa---------acttggagcaatt 52048646  T
Q  132 ttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 231  Q
    || | |||| |||||| | || || |||  ||| |||  ||| |||||| | ||||||||||||||| ||||||||||||||||| | ||||||||||||    
T  52048645 ttag-atggatgaccttctaggaagtttctcgaaaagagtgcaagtgaggacaaaacacgctgaaaagattcatgttggtttgtgagatcagtcgacaat 52048547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 116 - 249
Target Start/End: Original strand, 40607086 - 40607219
Alignment:
Q  116 ttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgt 215  Q
    |||| ||||||||| |||||||||||||||||||| |||| |||  || ||||| | |||||||| | |||| |||||||||||| || ||||| |||||    
T  40607086 ttgatttggagcaaatttgggatgggtgacctaccggaaagtttatcggtaagcgttcgagtgaggacaaaatacgctgaaaaaactcgtgttgatttgt 40607185  T
Q  216 ggggtcagtcgacaatactaaaagtcatctggga 249  Q
    ||  ||||||| |||| || || ||| |||||||    
T  40607186 ggaatcagtcggcaatgcttaaggtcgtctggga 40607219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 87 - 147
Target Start/End: Complemental strand, 11828499 - 11828439
Alignment:
Q  87 ttccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacct 147  Q
    ||||||||||||| ||||||||||||| ||| |||||||||| ||||||||||||||||||    
T  11828499 ttccataagaactccacagttaagcgtgctttacttggagcatttttgggatgggtgacct 11828439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 91 - 147
Target Start/End: Complemental strand, 27578296 - 27578240
Alignment:
Q  91 ataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacct 147  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||| |||||||    
T  27578296 ataagaacttcacagttaagcgtgcttgacttggagcagttttgggatgagtgacct 27578240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 140
Target Start/End: Original strand, 41869974 - 41870097
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggt-agctattccataagaacttcacagttaagcgtact 116  Q
    |||||||| |||| ||||||||| || |||||||||||||||||||| ||||||||||||| || | | |   ||||||||||||||| ||| || |  |    
T  41869974 gaaggaagacttataagaattgtatgatactacctatatcaacaagacgcatcttcttttcagtaacccaaatcataagaacttcacaattatgcatgtt 41870073  T
Q  117 tgacttggagcaattttgggatgg 140  Q
    |||| | |||||||||||||||||    
T  41870074 tgacatagagcaattttgggatgg 41870097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 89 - 226
Target Start/End: Complemental strand, 14571700 - 14571563
Alignment:
Q  89 ccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaac 188  Q
    ||||||||||| ||||||||||||| |||||||||||||||||| | ||||||||| ||    | || |||  ||  |||  || ||||||| | |||||    
T  14571700 ccataagaactccacagttaagcgtgcttgacttggagcaatttcgagatgggtgatcttttgggaagtttctcggaaagtgtgtgagtgaggacaaaac 14571601  T
Q  189 acgctgaaaaaattcatgttggtttgtggggtcagtcg 226  Q
    ||| |||||| | || ||||||||||||||||||||||    
T  14571600 acgttgaaaagactcgtgttggtttgtggggtcagtcg 14571563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 18 - 245
Target Start/End: Complemental strand, 23976303 - 23976074
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttc-ttttcggtag-ctattccataagaacttcacagttaagcgtac 115  Q
    ||||||||  ||| ||||||||||||||||||||||||  |||||||||||||||| ||||   ||| | |   ||||| |||| ||||||||| ||| |    
T  23976303 gaaggaagagttataagaattgtttggtactacctatactaacaagatgcatcttcttttttcatagccaaaatcataaaaactccacagttaaacgtgc 23976204  T
Q  116 ttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgt 215  Q
    ||||||||||  |||||||||||| |||| ||      |  ||| || | || ||||||  |||| | ||||||||||||||| | | |||||||||| |    
T  23976203 ttgacttggaataattttgggatgagtgagcttatgtgatgtttcccaaaaaacatgcggctgaggaaaaaacacgctgaaaagactaatgttggtttat 23976104  T
Q  216 ggggtcagtcgacaatactaaaagtcatct 245  Q
    |||||||||| ||||| |||||| ||||||    
T  23976103 ggggtcagtcaacaattctaaaaatcatct 23976074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 35 - 147
Target Start/End: Original strand, 42838696 - 42838812
Alignment:
Q  35 aattgtttggtactacctatatcaacaagatgcatctt--cttttcggtagct-attccataagaac-ttcacagttaagcgtacttgacttggagcaat 130  Q
    |||||||||||||||||||||||||||| |||||||||   |||||| ||| | ||||||||||||| |||||||||||||||  ||||||| || ||||    
T  42838696 aattgtttggtactacctatatcaacaaaatgcatctttctttttcgatagttcattccataagaactttcacagttaagcgtgtttgacttagaacaat 42838795  T
Q  131 tttgggatgggtgacct 147  Q
      ||| |||| ||||||    
T  42838796 aatggaatggatgacct 42838812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 137
Target Start/End: Original strand, 34554493 - 34554605
Alignment:
Q  26 gcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtag-ctattccataagaacttcacagttaagcgtacttgacttgg 124  Q
    ||||| ||||||||||||  |||||||||| || |||||||||| || |||| ||||| | ||||||||||||||||| |||||| | |  ||||||| |    
T  34554493 gcttataagaattgtttgacactacctataccagcaagatgcattttatttttggtagaccattccataagaacttcatagttaaacatgtttgacttag 34554592  T
Q  125 agcaattttggga 137  Q
    || ||||||||||    
T  34554593 agaaattttggga 34554605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 37 - 85
Target Start/End: Complemental strand, 39902518 - 39902470
Alignment:
Q  37 ttgtttggtactacctatatcaacaagatgcatcttcttttcggtagct 85  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  39902518 ttgtttggtactatctatatcaacaagatgcatcttcttttcgatagct 39902470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 109
Target Start/End: Original strand, 4186224 - 4186315
Alignment:
Q  19 aaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtag-ctattccataagaacttcacagttaa 109  Q
    |||||| ||||| ||||||  |||||||||||||| || |||||||| ||||||||||| ||||| | ||| |||||||||| |||||||||    
T  4186224 aaggaatgcttataagaatgatttggtactacctacatgaacaagattcatcttctttttggtagcccattgcataagaactacacagttaa 4186315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 15268138 - 15268043
Alignment:
Q  136 gatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 231  Q
    ||||||||| ||||| | ||||||  || ||||  |||||||||| | ||||||||||||||| | || |||||||||||||||||||||| ||||    
T  15268138 gatgggtgagctaccgggaaatttctcggtaagtgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaat 15268043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 123
Target Start/End: Complemental strand, 31817482 - 31817376
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtag-ctattccataagaacttcacagttaagcgtact 116  Q
    ||||||| | ||| || ||||||||||||||||||||| |||||| ||||||||||||||| | || | ||||| ||||||||  ||| ||||||||  |    
T  31817482 gaaggaacgtttataataattgtttggtactacctataccaacaaaatgcatcttcttttccgcagcccattccttaagaactctacaattaagcgtgtt 31817383  T
Q  117 tgacttg 123  Q
    |||||||    
T  31817382 tgacttg 31817376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 174 - 239
Target Start/End: Original strand, 5810047 - 5810112
Alignment:
Q  174 gagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaag 239  Q
    ||||||| ||||||||||||||||| | |||||||| |||||||||| ||||| |||| |||||||    
T  5810047 gagtgaggataaaacacgctgaaaagactcatgttgatttgtggggttagtcggcaatcctaaaag 5810112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 110
Target Start/End: Original strand, 44831061 - 44831146
Alignment:
Q  26 gcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtag-ctattccataagaacttcacagttaag 110  Q
    ||||| || ||||||||||||||||||| |  ||||||||| || ||||||||||||| | ||| |||| ||||||||||||||||    
T  44831061 gcttataaaaattgtttggtactacctaaactaacaagatgtatattcttttcggtagcccatttcatatgaacttcacagttaag 44831146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 157 - 241
Target Start/End: Original strand, 7381463 - 7381547
Alignment:
Q  157 ttttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtc 241  Q
    ||||||| ||||| |||||||||| | ||||||||||||||| |  | ||||||||||| |||||||||| |||| || ||||||    
T  7381463 ttttccggtaagcgtgcgagtgaggacaaaacacgctgaaaagacccgtgttggtttgtagggtcagtcggcaatgcttaaagtc 7381547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 139
Target Start/End: Original strand, 17629033 - 17629145
Alignment:
Q  27 cttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtag-ctattccataagaacttcacagttaagcgtacttgacttgga 125  Q
    |||| ||||||||||||||||||||||||  || ||||||| |||||||||  | || | | |||| ||||| | |||| |||||| | |||||||||||    
T  17629033 cttataagaattgtttggtactacctatactaataagatgcctcttctttttagaagcccaatccaaaagaattccaca-ttaagcatgcttgacttgga 17629131  T
Q  126 gcaattttgggatg 139  Q
    ||||||||| ||||    
T  17629132 gcaattttgagatg 17629145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 147
Target Start/End: Complemental strand, 26200279 - 26200247
Alignment:
Q  115 cttgacttggagcaattttgggatgggtgacct 147  Q
    |||||||||||||||||||||||||||||||||    
T  26200279 cttgacttggagcaattttgggatgggtgacct 26200247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 231
Target Start/End: Original strand, 35477870 - 35477930
Alignment:
Q  171 tgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 231  Q
    |||||| ||| | ||||||||||||||| | || |||||||||||||||||||||| ||||    
T  35477870 tgcgagagaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaat 35477930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 247
Target Start/End: Original strand, 24194612 - 24194675
Alignment:
Q  184 aaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtcatctgg 247  Q
    |||| ||||||||||||||| ||||  |||||||||| ||| | ||||||| ||||||||||||    
T  24194612 aaaatacgctgaaaaaattcgtgttaatttgtggggttagttgccaatactgaaagtcatctgg 24194675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 246
Target Start/End: Complemental strand, 53854859 - 53854702
Alignment:
Q  89 ccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaac 188  Q
    ||||||||||| || |||||||| |  | |||||| || | |||| ||||| ||||||||||| ||| ||| ||| ||| | |||||||||  | ||||     
T  53854859 ccataagaactccatagttaagcatgttagacttgaagtagtttttggatgtgtgacctaccaaaaagtttaccggtaaacgtgcgagtgatgacaaaat 53854760  T
Q  189 acgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtcatctg 246  Q
    ||| |||||| | || ||||| ||||| |||| ||||| |||| || |||||| ||||    
T  53854759 acgttgaaaagactcgtgttgatttgtagggttagtcggcaatgcttaaagtcgtctg 53854702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 241
Target Start/End: Complemental strand, 4414323 - 4414247
Alignment:
Q  165 taagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtc 241  Q
    ||||| ||||||| || | ||||||| ||||||| | || ||||||||||| |||||||||| |||| || ||||||    
T  4414323 taagcgtgcgagtcaggacaaaacacactgaaaagactcgtgttggtttgtagggtcagtcggcaatgcttaaagtc 4414247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 142
Target Start/End: Complemental strand, 52299902 - 52299826
Alignment:
Q  67 catcttcttttcggtagc-tattccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggt 142  Q
    |||||||||||  ||||| ||||| |||||||||||| |||||| | | ||||| || |||||||||| ||||||||    
T  52299902 catcttcttttttgtagcctattcaataagaacttcatagttaaacatgcttgattttgagcaattttaggatgggt 52299826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 131; Significance: 5e-68; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 19 - 240
Target Start/End: Original strand, 10357 - 10578
Alignment:
Q  19 aaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtactt 117  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||||| |||    
T  10357 aaggaaggcttataagaattgtttagtactacctatatcaacaagatgcatctttttttcggtagctcattccataagaactccacagttaagcgtgctt 10456  T
Q  118 gacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtgg 217  Q
    |||||||||||||||| |||||||||||||||| | || ||| | | ||||| |||||||||| | ||||||||||||||| | || |||||||||||||    
T  10457 gacttggagcaatttt-ggatgggtgacctaccgggaagtttcctggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtgg 10555  T
Q  218 ggtcagtcgacaatactaaaagt 240  Q
    |||||||||||||| || |||||    
T  10556 ggtcagtcgacaatgctgaaagt 10578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 130; Significance: 2e-67; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 18 - 226
Target Start/End: Complemental strand, 107553 - 107344
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||    
T  107553 gaaggaaggcttataagaattgtttgatactaccaatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgct 107454  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    ||||||||||||||||||||||||||||| |||| | || ||| ||| ||||| |||||||||| | |||||| |||||||| | || ||||||||||||    
T  107453 tgacttggagcaattttgggatgggtgacgtaccgggaagtttcccggtaagcgtgcgagtgaggacaaaacatgctgaaaagactcgtgttggtttgtg 107354  T
Q  217 gggtcagtcg 226  Q
    ||||||||||    
T  107353 gggtcagtcg 107344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 127; Significance: 1e-65; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 18 - 231
Target Start/End: Original strand, 2798 - 3012
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||| ||    
T  2798 gaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatattcttttcggtagctcattccataagaactccacagttaagcgtgct 2897  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    ||||||||||||||||||||||||| |||||||| | || ||| ||| ||||  |||||||||| | ||||||||||||||| | || ||||| ||||||    
T  2898 tgacttggagcaattttgggatgggagacctaccgggaagtttcccggtaagtgtgcgagtgaggacaaaacacgctgaaaagactcgtgttgatttgtg 2997  T
Q  217 gggtcagtcgacaat 231  Q
    |||||||||| ||||    
T  2998 gggtcagtcggcaat 3012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 124; Significance: 8e-64; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 18 - 231
Target Start/End: Original strand, 105776 - 105990
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| ||||||||||||| ||    
T  105776 gaaggaaggcttataagaattgtttggtactacctatatcaacaaaatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgct 105875  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttcc-gataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgt 215  Q
    ||||||||||||||||||||||| |||||||||| || || ||||| | ||||| |||||||||| | ||||||||||||||| | || ||||||||| |    
T  105876 tgacttggagcaattttgggatgtgtgacctacc-gagaagtttcctggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttat 105974  T
Q  216 ggggtcagtcgacaat 231  Q
     |||||||||| ||||    
T  105975 agggtcagtcggcaat 105990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 124; Significance: 8e-64; HSPs: 4)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 18 - 231
Target Start/End: Complemental strand, 162768 - 162553
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    |||||||| |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| | ||||||||||| ||    
T  162768 gaaggaagacttataagaattgtttggtactacctatattaacaagatgcatcttcttttcggtagctcattccataagaactccgcagttaagcgtgct 162669  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaa-attcatgttggtttgt 215  Q
    ||||||||||||| ||||||||| |||||||||| | || |||  |||||||| |||||||||| | |||||||||||||||| | || |||||||||||    
T  162668 tgacttggagcaactttgggatgagtgacctacctggaagtttcgcgataagcgtgcgagtgaggacaaaacacgctgaaaaagactcgtgttggtttgt 162569  T
Q  216 ggggtcagtcgacaat 231  Q
    ||||||||||| ||||    
T  162568 ggggtcagtcggcaat 162553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 58 - 249
Target Start/End: Original strand, 163167 - 163359
Alignment:
Q  58 aacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaa 156  Q
    |||||||||||||||||||||||||||| ||||  |||||| | ||||||||||||| |||||||||||||||||||||||||||||||||||| || ||    
T  163167 aacaagatgcatcttcttttcggtagctcattctttaagaattccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctacc-gagaa 163265  T
Q  157 ttttccga-taagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtcatctggga 249  Q
     ||||| | ||||| |||||||||| | ||||||||||||||| | || ||||||||||| ||||| ||||||||| || |||||| |||||||    
T  163266 gtttcccagtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtagggtctgtcgacaatcctgaaagtcgtctggga 163359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 61 - 231
Target Start/End: Complemental strand, 163181 - 163010
Alignment:
Q  61 aagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattt 159  Q
    |||||||||||| |||||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| | | || |||    
T  163181 aagatgcatcttgttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctatcgggaagttt 163082  T
Q  160 tccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 231  Q
      || ||||| | |||||||| | ||||||||||||||| | || ||||||||||||||| |||||| ||||    
T  163081 ctcggtaagcgttcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggccagtcggcaat 163010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 18 - 147
Target Start/End: Complemental strand, 69905 - 69775
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||| ||||| || ||||||||||||||||||||||||||| |||||||||| |||||  ||||| |||||||||||||| |||||||| |||  ||    
T  69905 gaaggaatgcttataataattgtttggtactacctatatcaacatgatgcatctttttttcattagctcattccataagaactccacagttatgcgggct 69806  T
Q  117 tgacttggagcaattttgggatgggtgacct 147  Q
    ||||| |||| | | || |||||||||||||    
T  69805 tgactaggagtagtctttggatgggtgacct 69775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 123; Significance: 3e-63; HSPs: 3)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 32 - 249
Target Start/End: Original strand, 5091 - 5308
Alignment:
Q  32 aagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaat 130  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||| ||| ||||||||||||    
T  5091 aagaattgtttggtactacctatattaacaagatgcatcttcttttcggtagctcatttcataagaactccacagttaagcgtgcttaacttggagcaat 5190  T
Q  131 tttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaa 230  Q
    || ||||||||||||||||| | |||||| ||| ||||  |||||||||| | ||||||||||||||| | || ||||||||||| ||||||||||||||    
T  5191 tt-gggatgggtgacctacctggaaatttcccggtaagtgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtagggtcagtcgacaa 5289  T
Q  231 tactaaaagtcatctggga 249  Q
    | || |||||| |||||||    
T  5290 tgcttaaagtcgtctggga 5308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 18 - 241
Target Start/End: Original strand, 4617 - 4840
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  ||||||||| |||||||||| || ||    
T  4617 gaaggaaggtttagaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcattttataagaactccacagttaagtgtgct 4716  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    | ||||||||||| |||||||||||||||||||| | || ||| ||| ||||  |||||||||| | ||||||||||||||| | || |||||||||||     
T  4717 taacttggagcaa-tttgggatgggtgacctaccgggaagtttcccggtaagtgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgta 4815  T
Q  217 gggtcagtcgacaatactaaaagtc 241  Q
    ||||||||||||||| || ||||||    
T  4816 gggtcagtcgacaatgcttaaagtc 4840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 241
Target Start/End: Original strand, 5346 - 5403
Alignment:
Q  184 aaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagtc 241  Q
    ||||||||||||||| | || ||||||||||| |||| |||||||||| || ||||||    
T  5346 aaaacacgctgaaaagactcgtgttggtttgtagggtaagtcgacaatgcttaaagtc 5403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 123; Significance: 3e-63; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 18 - 231
Target Start/End: Original strand, 154813 - 155027
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| |||||||||| |||||||||| ||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||| ||    
T  154813 gaaggaaggcttataagaattgttgggtactacctgtatcaacaagatgcatcttcttttcagtagctcattccataagaactccacagttaagcgtgct 154912  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    ||||||||||||||||||| |||||||||||||| | || |||  || ||||  ||| |||||| | ||||||||||||||| | || ||||||||||||    
T  154913 tgacttggagcaattttggaatgggtgacctaccgggaagtttctcggtaagtgtgctagtgaggacaaaacacgctgaaaagactcgtgttggtttgtg 155012  T
Q  217 gggtcagtcgacaat 231  Q
    |||||||||||||||    
T  155013 gggtcagtcgacaat 155027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 171 - 231
Target Start/End: Original strand, 154512 - 154572
Alignment:
Q  171 tgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 231  Q
    |||||||||| | ||||||||||||||| | || ||||| |||||||||||||||||||||    
T  154512 tgcgagtgaggacaaaacacgctgaaaagactcgtgttgatttgtggggtcagtcgacaat 154572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 48 - 231
Target Start/End: Complemental strand, 13593 - 13409
Alignment:
Q  48 tacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacc 146  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||    
T  13593 tacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccacagttaagcgtgcttgactttgagcaattttgggatgggtgacc 13494  T
Q  147 taccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 231  Q
    |||| | || |||     ||||| |||||||||| | ||||||||||||||| | || |||||||||||||||||||||| ||||    
T  13493 taccgggaagtttctttgtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaat 13409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 99; Significance: 7e-49; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 18 - 247
Target Start/End: Complemental strand, 17688 - 17458
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||| ||||| |||||||||||||||||||||||||||||| |||| |||||||||| ||||||| | | |||||||||| ||||||||||||| ||    
T  17688 gaaggaaagcttataagaattgtttggtactacctatatcaacaggatgtatcttctttttggtagctcaattcataagaactccacagttaagcgtgct 17589  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||||||| | | || |||||||||||||||  |||| |||| || ||||| |||||||||| | ||||||||||||||| | || ||||||||  |     
T  17588 tgacttggagtactctttggatgggtgacctactcgaaagtttttcggtaagcgtgcgagtgaggacaaaacacgctgaaaagactcgtgttggttcata 17489  T
Q  217 gggtcagtcgacaatactaaaagtcatctgg 247  Q
    |||||||||| ||||||| ||| || |||||    
T  17488 gggtcagtcggcaatacttaaaatcgtctgg 17458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 18 - 247
Target Start/End: Complemental strand, 18224 - 17995
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagcta-ttccataagaacttcacagttaagcgtact 116  Q
    |||||||| |||| |||||||||||| |||||||||||||||||||||||||||| |||| |||||||| ||||||||||||| ||||||||||||| ||    
T  18224 gaaggaagacttataagaattgtttgatactacctatatcaacaagatgcatcttttttt-ggtagctaattccataagaactccacagttaagcgtgct 18126  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||||||| | | || ||||||||||||||   |||| |||| || ||| | |||||||||| | | ||||||||||||| | || ||||| |||||     
T  18125 tgacttggagtagtctttggatgggtgacctattggaaagtttttcggtaaacgtgcgagtgaggacacaacacgctgaaaagactcgtgttgatttgta 18026  T
Q  217 gggtcagtcgacaatactaaaagtcatctgg 247  Q
    |||||| |||||||| || |||||| |||||    
T  18025 gggtcaatcgacaatgcttaaagtcgtctgg 17995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 96; Significance: 4e-47; HSPs: 1)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 61 - 231
Target Start/End: Complemental strand, 14749 - 14578
Alignment:
Q  61 aagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattt 159  Q
    |||||||||||| |||||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| | || |||    
T  14749 aagatgcatcttgttttcggtagctcattccataagaactccacagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagttt 14650  T
Q  160 tccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaat 231  Q
     ||| ||||  |||||||||| | |||||| |||||||| | || ||||||||||||||||||| |||||||    
T  14649 cccggtaagtgtgcgagtgaggacaaaacatgctgaaaagactcgtgttggtttgtggggtcagccgacaat 14578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 89; Significance: 6e-43; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 73 - 240
Target Start/End: Original strand, 421 - 589
Alignment:
Q  73 cttttcggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcat 171  Q
    ||||||||||||| ||||||||| | || || |||||||||| |||||| ||||||||||||||||||||||||||||| | || ||| |||||||||||    
T  421 cttttcggtagctcattccataaaatctccatagttaagcgtgcttgacatggagcaattttgggatgggtgacctaccgggaagtttcccgataagcat 520  T
Q  172 gcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagt 240  Q
    | ||||||| | ||||||||||||||| | || |||||||||||||||||||||| |||| ||||||||    
T  521 gtgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctaaaagt 589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 77; Significance: 9e-36; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 18 - 231
Target Start/End: Original strand, 245142 - 245352
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtag-ctattccataagaacttcacagttaagcgtact 116  Q
    ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||  ||||||||||| ||||   |||||| ||    
T  245142 gaagggaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc-tttcggtagcctaaaccataagaactccaca---aagcgtgct 245237  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||||| ||||||||||| |||||||||||| |  | || |||  ||  |||| || ||||||| | |||||||| |||||| | || |||||||||| |    
T  245238 tgacttagagcaattttgagatgggtgaccttctgggaagtttctcggaaagcgtgtgagtgaggacaaaacacggtgaaaagactcgtgttggtttgcg 245337  T
Q  217 gggtcagtcgacaat 231  Q
    |||||||||| ||||    
T  245338 gggtcagtcggcaat 245352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 26 - 120
Target Start/End: Original strand, 245579 - 245674
Alignment:
Q  26 gcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtag-ctattccataagaacttcacagttaagcgtacttgac 120  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||  ||||||||||| ||||||||||||| ||||||    
T  245579 gcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcagtagcctaaaccataagaactccacagttaagcgtgcttgac 245674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 89 - 226
Target Start/End: Original strand, 245676 - 245813
Alignment:
Q  89 ccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaac 188  Q
    ||||||||||| ||||||||||||| |||||||||||||||||| | ||||||||| ||    | || |||  ||  |||  || ||||||| | |||||    
T  245676 ccataagaactccacagttaagcgtgcttgacttggagcaatttcgagatgggtgatcttttgggaagtttctcggaaagtgtgtgagtgaggacaaaac 245775  T
Q  189 acgctgaaaaaattcatgttggtttgtggggtcagtcg 226  Q
    ||| |||||| | || ||||||||||||||||||||||    
T  245776 acgttgaaaagactcgtgttggtttgtggggtcagtcg 245813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0557 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0557
Description:

Target: scaffold0557; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 18 - 239
Target Start/End: Original strand, 2161 - 2374
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtag-ctattccataagaacttcacagttaagcgtact 116  Q
    ||||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||| ||||| | ||||| |||||||| ||||||||||| | ||    
T  2161 gaaggaaggcttataagaattgtttggtactccctatataaacaagatgcatcttctttttggtagcccattccttaagaactccacagttaagcatgct 2260  T
Q  117 tgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgtg 216  Q
    |||| ||||| | | ||  |||||||||||||||           || ||||| |||||||||| | ||||||||||||||| | || |||||||||||     
T  2261 tgacatggagtagtcttatgatgggtgacctacc---------ctcggtaagcgtgcgagtgaggagaaaacacgctgaaaagactcgtgttggtttgta 2351  T
Q  217 gggtcagtcgacaatactaaaag 239  Q
    || |||||||||||| |||||||    
T  2352 ggatcagtcgacaatcctaaaag 2374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 74; Significance: 6e-34; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 102 - 227
Target Start/End: Complemental strand, 1706 - 1581
Alignment:
Q  102 acagttaagcgtacttgacttggagcaattttgggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaat 201  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| | || ||| ||| |||||||| ||||||| | |||||||||| |||| |     
T  1706 acagttaagcgtgcttgacttggagcaattttgggatgggtgacctaccgggaagtttcccggtaagcatgtgagtgaggacaaaacacgctaaaaagac 1607  T
Q  202 tcatgttggtttgtggggtcagtcga 227  Q
    || |||||||||||||||||||||||    
T  1606 tcgtgttggtttgtggggtcagtcga 1581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 18 - 126
Target Start/End: Original strand, 14797 - 14906
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtact 116  Q
    ||||||| ||||| ||||||||||||||| |||||||||||| |||||||||| |||||||||||  | |||  ||||||||||||||||||||| |  |    
T  14797 gaaggaatgcttataagaattgtttggtaatacctatatcaataagatgcatcgtcttttcggtaattcattgaataagaacttcacagttaagcatgtt 14896  T
Q  117 tgacttggag 126  Q
    ||||||||||    
T  14897 tgacttggag 14906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 23729 - 23785
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttct 74  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  23729 gaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttct 23785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 4072 - 4006
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagc 84  Q
    ||||||| ||||| ||||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  4072 gaaggaatgcttataagaattgtttggtactacctgtatcaacaagatgcatcttctttttggtagc 4006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 142364 - 142305
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttctttt 77  Q
    ||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  142364 gaaggaatgtttataagaattgtttggtactacctatatcaacaagatgcatcttctttt 142305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 22 - 147
Target Start/End: Complemental strand, 44807 - 44681
Alignment:
Q  22 gaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctatt-ccataagaacttcacagttaagcgtacttgac 120  Q
    ||||||||| ||||||||||||||| ||||  || |||||||||||  ||||||||| ||||| |   |||| |||||| || ||||||  || ||||||    
T  44807 gaaggcttataagaattgtttggtattaccggtaccaacaagatgccacttcttttcagtagccaggaccattagaactccaaagttaaatgtgcttgac 44708  T
Q  121 ttggagcaattttgggatgggtgacct 147  Q
    ||||| |||||||||||||||||||||    
T  44707 ttggatcaattttgggatgggtgacct 44681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 35 - 215
Target Start/End: Original strand, 26143 - 26322
Alignment:
Q  35 aattgtttggtactacctatatcaacaagatgcatcttcttttcggtagct-attccataagaacttcacagttaagcgtacttgacttggagcaatttt 133  Q
    |||| ||||||||||| |||||||||| ||||||||||||||| ||||||| |||  |||||||||   |||||||| || |||||||||||| | ||||    
T  26143 aattttttggtactacatatatcaacatgatgcatcttctttttggtagctcattttataagaact--ccagttaagtgtgcttgacttggagtattttt 26240  T
Q  134 gggatgggtgacctaccagaaaattttccgataagcatgcgagtgagaataaaacacgctgaaaaaattcatgttggtttgt 215  Q
     ||||| |||| ||   ||||| |||  ||| |||| |||||| ||||| | ||||||||||||| | || ||||| |||||    
T  26241 aggatgagtgagcttatagaaagtttctcgaaaagcttgcgagggagaacataacacgctgaaaagactcgtgttgatttgt 26322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 147
Target Start/End: Original strand, 7070 - 7128
Alignment:
Q  89 ccataagaacttcacagttaagcgtacttgacttggagcaattttgggatgggtgacct 147  Q
    ||||||||||| ||||||||||| | ||||||||||||||||||||| |||||||||||    
T  7070 ccataagaactccacagttaagcatgcttgacttggagcaattttggtatgggtgacct 7128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 45442 - 45497
Alignment:
Q  18 gaaggaaggcttaaaagaattgtttggtactacctatatcaacaagatgcatcttc 73  Q
    |||||||| ||||  |||||| ||||||||||||||||||||||||||| ||||||    
T  45442 gaaggaagacttatgagaattatttggtactacctatatcaacaagatgtatcttc 45497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 240
Target Start/End: Complemental strand, 63030 - 62974
Alignment:
Q  184 aaaacacgctgaaaaaattcatgttggtttgtggggtcagtcgacaatactaaaagt 240  Q
    ||||||||||||||| | || | |||||||||||||||||||| |||| || |||||    
T  63030 aaaacacgctgaaaagactcgtattggtttgtggggtcagtcggcaatcctgaaagt 62974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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