View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5232_low_9 (Length: 326)

Name: NF5232_low_9
Description: NF5232
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5232_low_9
NF5232_low_9
[»] scaffold0110 (1 HSPs)
scaffold0110 (22-309)||(4182-4469)
[»] chr3 (47 HSPs)
chr3 (23-207)||(38462208-38462390)
chr3 (48-167)||(23785221-23785340)
chr3 (73-196)||(40122763-40122884)
chr3 (121-199)||(20192664-20192741)
chr3 (36-193)||(36646355-36646511)
chr3 (95-190)||(24887315-24887409)
chr3 (22-141)||(43115048-43115167)
chr3 (41-183)||(54775079-54775219)
chr3 (111-184)||(36783382-36783454)
chr3 (97-228)||(1816488-1816619)
chr3 (111-167)||(2201094-2201150)
chr3 (23-210)||(2321099-2321288)
chr3 (22-165)||(14548680-14548823)
chr3 (111-207)||(20502116-20502219)
chr3 (96-172)||(25453892-25453968)
chr3 (92-167)||(23315592-23315667)
chr3 (131-190)||(49586984-49587042)
chr3 (73-167)||(24785171-24785265)
chr3 (97-167)||(31337435-31337505)
chr3 (34-132)||(37273135-37273233)
chr3 (131-233)||(41028919-41029020)
chr3 (156-225)||(16790181-16790249)
chr3 (98-147)||(20874339-20874388)
chr3 (126-183)||(42038940-42038996)
chr3 (92-207)||(24158532-24158645)
chr3 (73-217)||(27792789-27792932)
chr3 (111-164)||(33965537-33965592)
chr3 (113-225)||(43116478-43116589)
chr3 (116-199)||(1395606-1395688)
chr3 (75-181)||(2318596-2318703)
chr3 (95-162)||(23249529-23249596)
chr3 (111-190)||(28306102-28306180)
chr3 (47-162)||(41452494-41452609)
chr3 (122-195)||(2865718-2865789)
chr3 (111-165)||(19679376-19679430)
chr3 (94-168)||(21872302-21872376)
chr3 (111-224)||(31075604-31075717)
chr3 (42-147)||(1217779-1217884)
chr3 (121-166)||(3467446-3467491)
chr3 (111-164)||(33405215-33405268)
chr3 (122-167)||(54965472-54965517)
chr3 (129-197)||(8007761-8007828)
chr3 (121-205)||(12923383-12923466)
chr3 (133-189)||(15304417-15304472)
chr3 (111-207)||(22232753-22232848)
chr3 (111-183)||(24235731-24235802)
chr3 (139-207)||(44374720-44374787)
[»] chr6 (47 HSPs)
chr6 (23-190)||(281808-281974)
chr6 (110-216)||(10016463-10016568)
chr6 (47-184)||(2117353-2117489)
chr6 (115-167)||(3181120-3181172)
chr6 (115-198)||(29274281-29274363)
chr6 (41-183)||(5328925-5329065)
chr6 (121-230)||(5550036-5550144)
chr6 (115-196)||(22742304-22742384)
chr6 (112-184)||(2027455-2027526)
chr6 (111-207)||(4248885-4248980)
chr6 (129-217)||(8470054-8470141)
chr6 (42-205)||(9027506-9027669)
chr6 (122-226)||(10452419-10452522)
chr6 (47-147)||(28088207-28088306)
chr6 (67-167)||(31671078-31671178)
chr6 (88-167)||(3785725-3785804)
chr6 (20-207)||(8420154-8420340)
chr6 (120-183)||(34429747-34429809)
chr6 (151-212)||(5637313-5637375)
chr6 (36-189)||(9093528-9093681)
chr6 (73-207)||(10154148-10154281)
chr6 (36-146)||(10616514-10616624)
chr6 (111-184)||(1402946-1403018)
chr6 (149-226)||(2514610-2514686)
chr6 (111-164)||(5623125-5623178)
chr6 (23-103)||(2460111-2460191)
chr6 (111-183)||(4006665-4006736)
chr6 (36-167)||(4080884-4081013)
chr6 (143-199)||(24774693-24774748)
chr6 (78-226)||(32386578-32386725)
chr6 (111-182)||(2112152-2112222)
chr6 (42-205)||(7148596-7148757)
chr6 (99-162)||(10032542-10032605)
chr6 (128-183)||(24836264-24836318)
chr6 (47-166)||(30523627-30523745)
chr6 (23-225)||(32975887-32976088)
chr6 (92-195)||(33787774-33787876)
chr6 (114-228)||(3204593-3204706)
chr6 (79-184)||(4247077-4247181)
chr6 (96-189)||(24782004-24782096)
chr6 (113-190)||(31624202-31624278)
chr6 (22-167)||(33887796-33887941)
chr6 (111-147)||(4246396-4246432)
chr6 (93-197)||(6654552-6654655)
chr6 (111-167)||(25426136-25426192)
chr6 (91-167)||(28660788-28660864)
chr6 (20-64)||(32917266-32917310)
[»] chr5 (56 HSPs)
chr5 (74-207)||(28586777-28586909)
chr5 (42-198)||(16889671-16889826)
chr5 (135-227)||(20982207-20982298)
chr5 (41-184)||(14295456-14295598)
chr5 (25-183)||(37588322-37588479)
chr5 (66-199)||(12975282-12975413)
chr5 (113-228)||(39128545-39128659)
chr5 (73-163)||(18875331-18875421)
chr5 (115-227)||(9202800-9202912)
chr5 (36-189)||(35960359-35960510)
chr5 (65-197)||(12425508-12425639)
chr5 (116-167)||(32059642-32059693)
chr5 (22-197)||(32172590-32172764)
chr5 (136-226)||(37063147-37063236)
chr5 (25-183)||(37526161-37526318)
chr5 (94-167)||(38047886-38047959)
chr5 (114-199)||(39257438-39257521)
chr5 (139-199)||(7096203-7096262)
chr5 (121-217)||(19177396-19177491)
chr5 (22-170)||(30217045-30217192)
chr5 (47-133)||(1437611-1437697)
chr5 (128-223)||(35135727-35135821)
chr5 (119-165)||(14980471-14980517)
chr5 (111-218)||(26209461-26209566)
chr5 (112-181)||(12595789-12595857)
chr5 (150-207)||(35095870-35095926)
chr5 (41-154)||(36542260-36542373)
chr5 (126-199)||(38829698-38829770)
chr5 (42-147)||(41957430-41957535)
chr5 (115-167)||(36539712-36539764)
chr5 (111-167)||(41277398-41277454)
chr5 (128-167)||(583838-583877)
chr5 (70-189)||(3970687-3970806)
chr5 (20-166)||(6109452-6109596)
chr5 (107-146)||(8177581-8177620)
chr5 (92-167)||(15003543-15003618)
chr5 (68-207)||(18704041-18704178)
chr5 (25-183)||(37690598-37690756)
chr5 (92-195)||(38831486-38831587)
chr5 (92-218)||(19113146-19113271)
chr5 (116-170)||(19369276-19369330)
chr5 (34-167)||(26390760-26390893)
chr5 (68-199)||(15074754-15074883)
chr5 (42-119)||(18700399-18700475)
chr5 (113-166)||(18857450-18857503)
chr5 (94-167)||(37198111-37198184)
chr5 (47-147)||(2569679-2569779)
chr5 (115-195)||(8481157-8481236)
chr5 (47-167)||(10272415-10272535)
chr5 (115-199)||(12595503-12595586)
chr5 (113-184)||(14599353-14599425)
chr5 (111-167)||(26516366-26516422)
chr5 (131-183)||(29116998-29117049)
chr5 (123-207)||(31694445-31694528)
chr5 (111-167)||(35550915-35550970)
chr5 (115-163)||(41017697-41017745)
[»] chr8 (55 HSPs)
chr8 (47-228)||(4558704-4558884)
chr8 (68-225)||(28769344-28769500)
chr8 (68-196)||(12361130-12361257)
chr8 (105-184)||(27728063-27728141)
chr8 (111-194)||(33209268-33209350)
chr8 (111-207)||(35298525-35298621)
chr8 (34-214)||(39551180-39551359)
chr8 (92-199)||(29973016-29973122)
chr8 (133-207)||(35534931-35535004)
chr8 (94-167)||(4763884-4763957)
chr8 (96-225)||(10727106-10727233)
chr8 (34-166)||(30191112-30191244)
chr8 (74-190)||(1470867-1470982)
chr8 (111-207)||(8799332-8799427)
chr8 (150-226)||(14482110-14482185)
chr8 (92-167)||(6509332-6509407)
chr8 (20-167)||(6950288-6950435)
chr8 (53-184)||(11183495-11183625)
chr8 (131-225)||(3645884-3645977)
chr8 (122-199)||(10076335-10076410)
chr8 (105-167)||(34770858-34770920)
chr8 (79-158)||(43704392-43704473)
chr8 (139-228)||(34563156-34563244)
chr8 (111-228)||(35869743-35869859)
chr8 (112-196)||(3936787-3936870)
chr8 (73-133)||(10079080-10079140)
chr8 (22-217)||(13652132-13652327)
chr8 (22-217)||(13710775-13710970)
chr8 (73-133)||(30277255-30277315)
chr8 (149-225)||(39392747-39392822)
chr8 (17-217)||(41620245-41620444)
chr8 (86-146)||(44865587-44865647)
chr8 (34-133)||(8060669-8060768)
chr8 (68-195)||(9699940-9700066)
chr8 (79-198)||(11795028-11795146)
chr8 (116-183)||(26820150-26820216)
chr8 (111-162)||(30013189-30013240)
chr8 (73-168)||(42215316-42215411)
chr8 (68-162)||(26284800-26284894)
chr8 (121-227)||(29699161-29699266)
chr8 (73-167)||(31862459-31862553)
chr8 (111-225)||(35453671-35453784)
chr8 (22-64)||(40280185-40280227)
chr8 (114-196)||(42597339-42597420)
chr8 (120-205)||(6918236-6918320)
chr8 (173-218)||(8629025-8629070)
chr8 (98-167)||(31885094-31885162)
chr8 (79-184)||(39561557-39561661)
chr8 (150-207)||(40356798-40356854)
chr8 (115-167)||(787158-787210)
chr8 (68-140)||(8062322-8062394)
chr8 (115-183)||(30040598-30040664)
chr8 (73-145)||(31705073-31705145)
chr8 (20-100)||(39049305-39049385)
chr8 (111-167)||(41336693-41336749)
[»] chr4 (51 HSPs)
chr4 (96-207)||(44319877-44319986)
chr4 (22-206)||(4071811-4071989)
chr4 (46-184)||(24929443-24929580)
chr4 (111-207)||(54325085-54325180)
chr4 (121-207)||(8422897-8422980)
chr4 (121-199)||(30338650-30338727)
chr4 (133-207)||(36734820-36734893)
chr4 (79-216)||(21157686-21157822)
chr4 (128-199)||(11389461-11389531)
chr4 (47-162)||(24091434-24091549)
chr4 (33-196)||(45128280-45128442)
chr4 (114-181)||(53626729-53626795)
chr4 (111-218)||(2980514-2980625)
chr4 (139-212)||(4191661-4191734)
chr4 (73-167)||(7694020-7694114)
chr4 (86-176)||(30581700-30581790)
chr4 (106-204)||(32066453-32066549)
chr4 (136-210)||(32724043-32724116)
chr4 (73-183)||(49219090-49219199)
chr4 (112-190)||(55870390-55870467)
chr4 (92-160)||(18019944-18020013)
chr4 (25-165)||(23819057-23819197)
chr4 (111-228)||(24443944-24444060)
chr4 (74-207)||(30207582-30207713)
chr4 (97-207)||(3891504-3891611)
chr4 (111-207)||(18630607-18630702)
chr4 (131-207)||(19422345-19422420)
chr4 (23-103)||(27123312-27123392)
chr4 (111-167)||(46859896-46859952)
chr4 (112-167)||(13949893-13949948)
chr4 (25-167)||(6987703-6987845)
chr4 (115-197)||(29373939-29374020)
chr4 (73-167)||(31038877-31038971)
chr4 (149-207)||(47970245-47970302)
chr4 (116-198)||(50745936-50746017)
chr4 (27-84)||(2841675-2841732)
chr4 (34-167)||(2996539-2996672)
chr4 (109-190)||(21953217-21953297)
chr4 (94-167)||(32920431-32920504)
chr4 (121-166)||(42321937-42321982)
chr4 (93-154)||(42866047-42866108)
chr4 (73-146)||(43824270-43824343)
chr4 (111-167)||(927442-927498)
chr4 (111-167)||(3175917-3175973)
chr4 (98-189)||(7368090-7368181)
chr4 (75-163)||(18628555-18628643)
chr4 (129-225)||(30024609-30024704)
chr4 (115-163)||(41097295-41097343)
chr4 (136-184)||(41701514-41701561)
chr4 (111-167)||(51630077-51630133)
chr4 (73-145)||(56055739-56055810)
[»] chr2 (66 HSPs)
chr2 (111-207)||(17952749-17952844)
chr2 (41-166)||(9556206-9556331)
chr2 (94-207)||(28803537-28803649)
chr2 (114-167)||(33256706-33256759)
chr2 (96-207)||(33267556-33267659)
chr2 (95-199)||(12215742-12215845)
chr2 (73-184)||(6227701-6227811)
chr2 (111-214)||(18962086-18962188)
chr2 (132-226)||(18884789-18884883)
chr2 (73-167)||(22681195-22681289)
chr2 (73-207)||(7103492-7103624)
chr2 (54-193)||(1939323-1939461)
chr2 (111-167)||(5043608-5043664)
chr2 (111-167)||(11513864-11513920)
chr2 (51-167)||(43141837-43141953)
chr2 (92-203)||(5133703-5133813)
chr2 (111-198)||(13866825-13866911)
chr2 (139-198)||(32098384-32098442)
chr2 (136-199)||(33192128-33192190)
chr2 (41-163)||(33525945-33526067)
chr2 (92-160)||(3059303-3059372)
chr2 (34-207)||(9478226-9478398)
chr2 (74-195)||(25790065-25790185)
chr2 (46-167)||(28039315-28039436)
chr2 (150-207)||(31461365-31461421)
chr2 (114-167)||(33942116-33942169)
chr2 (98-199)||(34054936-34055036)
chr2 (139-196)||(37033982-37034038)
chr2 (20-117)||(41809202-41809299)
chr2 (74-227)||(42817387-42817539)
chr2 (131-226)||(11393433-11393528)
chr2 (131-226)||(11410094-11410189)
chr2 (47-199)||(25609731-25609882)
chr2 (111-207)||(37053521-37053616)
chr2 (48-167)||(14666514-14666633)
chr2 (111-198)||(15377701-15377787)
chr2 (111-162)||(18066099-18066150)
chr2 (68-167)||(18840762-18840861)
chr2 (41-195)||(42457887-42458041)
chr2 (116-218)||(3102609-3102710)
chr2 (121-163)||(3235442-3235483)
chr2 (111-217)||(3673724-3673829)
chr2 (121-167)||(4550743-4550789)
chr2 (121-207)||(13630339-13630424)
chr2 (96-162)||(13736326-13736392)
chr2 (73-195)||(30537537-30537658)
chr2 (136-226)||(35459818-35459907)
chr2 (22-59)||(6547248-6547285)
chr2 (50-127)||(7283002-7283079)
chr2 (20-133)||(11488277-11488388)
chr2 (111-207)||(15780006-15780099)
chr2 (34-146)||(30552614-30552727)
chr2 (123-184)||(31740019-31740079)
chr2 (124-217)||(35329880-35329972)
chr2 (115-207)||(1493565-1493656)
chr2 (96-207)||(6993757-6993866)
chr2 (121-181)||(9395083-9395142)
chr2 (113-165)||(9551547-9551599)
chr2 (111-147)||(25800815-25800851)
chr2 (92-152)||(26282057-26282117)
chr2 (121-205)||(28810431-28810514)
chr2 (123-195)||(29430695-29430765)
chr2 (42-134)||(32821808-32821900)
chr2 (151-207)||(33197327-33197382)
chr2 (121-165)||(37766766-37766810)
chr2 (112-167)||(43299451-43299507)
[»] chr7 (57 HSPs)
chr7 (112-227)||(47003994-47004108)
chr7 (113-199)||(9527140-9527225)
chr7 (22-227)||(27481253-27481457)
chr7 (111-190)||(3802187-3802265)
chr7 (111-206)||(11208377-11208471)
chr7 (26-196)||(27121557-27121718)
chr7 (22-199)||(33894558-33894738)
chr7 (25-183)||(48157082-48157239)
chr7 (97-205)||(28340878-28340985)
chr7 (73-167)||(38010680-38010774)
chr7 (23-196)||(4966094-4966266)
chr7 (113-165)||(17989073-17989125)
chr7 (112-195)||(1417203-1417285)
chr7 (36-190)||(5006484-5006635)
chr7 (111-199)||(23721436-23721528)
chr7 (120-207)||(24973871-24973957)
chr7 (94-165)||(28340427-28340498)
chr7 (92-167)||(29363484-29363559)
chr7 (36-198)||(3500940-3501100)
chr7 (111-161)||(5369739-5369789)
chr7 (92-162)||(10190766-10190836)
chr7 (73-199)||(27378838-27378962)
chr7 (73-199)||(28165026-28165151)
chr7 (113-167)||(31002727-31002781)
chr7 (41-146)||(33645939-33646044)
chr7 (68-162)||(44821930-44822024)
chr7 (121-167)||(45777229-45777275)
chr7 (121-199)||(45813238-45813315)
chr7 (96-196)||(2048075-2048172)
chr7 (111-204)||(27548193-27548285)
chr7 (136-217)||(45593792-45593872)
chr7 (111-180)||(46825052-46825120)
chr7 (112-184)||(2727409-2727480)
chr7 (139-207)||(3241368-3241435)
chr7 (139-207)||(7244629-7244696)
chr7 (111-167)||(12110326-12110382)
chr7 (115-199)||(33709382-33709466)
chr7 (40-204)||(46081963-46082129)
chr7 (42-134)||(46281119-46281211)
chr7 (20-167)||(3468580-3468727)
chr7 (126-197)||(35536044-35536114)
chr7 (73-184)||(40688996-40689106)
chr7 (68-167)||(44151485-44151584)
chr7 (141-199)||(5276159-5276216)
chr7 (45-131)||(9423576-9423662)
chr7 (139-205)||(15328535-15328600)
chr7 (150-196)||(42656453-42656498)
chr7 (143-184)||(2999141-2999181)
chr7 (111-199)||(7274396-7274482)
chr7 (131-228)||(24975810-24975906)
chr7 (97-146)||(25507336-25507385)
chr7 (73-198)||(37064230-37064357)
chr7 (121-217)||(5373142-5373237)
chr7 (92-184)||(22759136-22759227)
chr7 (111-207)||(27492722-27492817)
chr7 (20-64)||(36537977-36538021)
chr7 (139-167)||(44178999-44179027)
[»] scaffold0024 (1 HSPs)
scaffold0024 (34-228)||(27482-27675)
[»] chr1 (72 HSPs)
chr1 (93-199)||(15361646-15361753)
chr1 (42-184)||(30259465-30259607)
chr1 (68-167)||(39347972-39348071)
chr1 (112-183)||(49517021-49517091)
chr1 (75-198)||(52013833-52013956)
chr1 (73-167)||(10199418-10199512)
chr1 (42-196)||(17420141-17420294)
chr1 (115-189)||(33527199-33527272)
chr1 (111-192)||(7218122-7218202)
chr1 (22-167)||(15581220-15581365)
chr1 (111-207)||(4363680-4363774)
chr1 (88-160)||(8130409-8130481)
chr1 (111-167)||(48830124-48830180)
chr1 (22-105)||(4868428-4868510)
chr1 (68-167)||(12477292-12477391)
chr1 (128-183)||(15360845-15360899)
chr1 (76-207)||(17269177-17269307)
chr1 (76-167)||(25479547-25479638)
chr1 (79-190)||(33723398-33723508)
chr1 (121-199)||(5941505-5941582)
chr1 (68-166)||(21012757-21012855)
chr1 (68-167)||(35017540-35017641)
chr1 (96-166)||(44422666-44422736)
chr1 (149-207)||(48282060-48282118)
chr1 (123-200)||(3319992-3320069)
chr1 (110-167)||(15565879-15565936)
chr1 (111-184)||(17631149-17631221)
chr1 (111-164)||(25006082-25006135)
chr1 (36-133)||(27140478-27140575)
chr1 (94-167)||(27738211-27738284)
chr1 (68-168)||(6279364-6279464)
chr1 (68-204)||(6981422-6981557)
chr1 (111-195)||(17422986-17423070)
chr1 (116-164)||(37272639-37272687)
chr1 (136-207)||(45107550-45107619)
chr1 (150-206)||(46499941-46499996)
chr1 (136-199)||(781192-781255)
chr1 (131-166)||(4215339-4215374)
chr1 (112-175)||(5592734-5592797)
chr1 (115-202)||(6265026-6265112)
chr1 (111-166)||(10581125-10581180)
chr1 (121-184)||(17628549-17628611)
chr1 (111-162)||(19462814-19462865)
chr1 (111-197)||(23544687-23544773)
chr1 (92-167)||(28467337-28467411)
chr1 (73-172)||(30257644-30257743)
chr1 (72-167)||(34179881-34179976)
chr1 (95-226)||(40304087-40304216)
chr1 (139-213)||(48748659-48748731)
chr1 (111-205)||(4548649-4548743)
chr1 (112-190)||(5756735-5756812)
chr1 (41-167)||(15515507-15515633)
chr1 (73-167)||(16322815-16322909)
chr1 (81-147)||(25005815-25005881)
chr1 (51-190)||(28689440-28689580)
chr1 (115-157)||(29415642-29415684)
chr1 (129-199)||(45999354-45999423)
chr1 (47-184)||(3924574-3924710)
chr1 (68-145)||(6659502-6659579)
chr1 (69-182)||(12564505-12564616)
chr1 (73-146)||(23902077-23902150)
chr1 (121-227)||(29666367-29666473)
chr1 (131-228)||(29793991-29794086)
chr1 (126-167)||(47877088-47877129)
chr1 (92-133)||(51929804-51929845)
chr1 (111-167)||(10586420-10586476)
chr1 (115-195)||(21516312-21516391)
chr1 (130-166)||(28788605-28788641)
chr1 (115-167)||(30371114-30371166)
chr1 (136-196)||(35080143-35080202)
chr1 (111-167)||(45205034-45205090)
chr1 (135-199)||(45804212-45804275)
[»] scaffold0590 (1 HSPs)
scaffold0590 (136-207)||(1147-1217)
[»] scaffold0508 (1 HSPs)
scaffold0508 (111-230)||(9823-9941)
[»] scaffold0275 (1 HSPs)
scaffold0275 (136-207)||(2758-2828)
[»] scaffold0053 (1 HSPs)
scaffold0053 (115-199)||(20114-20197)
[»] scaffold0147 (1 HSPs)
scaffold0147 (37-133)||(12678-12775)
[»] scaffold0584 (1 HSPs)
scaffold0584 (73-145)||(1343-1414)
[»] scaffold0446 (1 HSPs)
scaffold0446 (73-145)||(5469-5540)
[»] scaffold0072 (1 HSPs)
scaffold0072 (136-228)||(4878-4969)


Alignment Details
Target: scaffold0110 (Bit Score: 284; Significance: 1e-159; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 22 - 309
Target Start/End: Original strand, 4182 - 4469
Alignment:
Q  22 cacttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttatta 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  4182 cacttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccgtaagctttctagcatagcttatta 4281  T
Q  122 aaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaaacacttatcct 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4282 aaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaaacacttatcct 4381  T
Q  222 ataagcgataaactaatctgttatctaagtattaatgtatgatggttgcttttttaagtgttttttcaatgctttggagctctgtagt 309  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4382 ataagcgataaactaatctgttatctaagtattaatgtatgatggttgcttttttaagtgttttttcaatgctttggagctctgtagt 4469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 61; Significance: 4e-26; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 23 - 207
Target Start/End: Complemental strand, 38462390 - 38462208
Alignment:
Q  23 acttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaa 122  Q
    |||||| || ||| ||||||||| ||||  |||||| |||||  ||| | |||||||||||| | ||| |||||||||||| ||| | ||||||||| ||    
T  38462390 acttgtaagattgattgtgagagcttatacaaacaa-ttatgacttgaccataagttgttttcagcttatttccataagctatcttggatagcttatgaa 38462292  T
Q  123 aacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatga 207  Q
    ||||| ||||||  ||||||||||| ||||||||||||||||||| |||  ||||||||||| ||||| |||| ||| |||||||    
T  38462291 aacagtttatagcatatatgaaaacagtttgactttattttatct-tttggtatagaaatagcttataaataaacacttatatga 38462208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 48 - 167
Target Start/End: Complemental strand, 23785340 - 23785221
Alignment:
Q  48 tatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaac 147  Q
    |||||||||| ||||||   |||| |||||||||||| | |||||||||||||||| || |  | ||||| | ||||||| |||||| ||||||||| ||    
T  23785340 tatggaaacagcttatggcgtgtccataagttgttttcagcttgtttccataagctctccatgagagcttgtgaaaacagtttatagcttatatgaatac 23785241  T
Q  148 ggtttgactttattttatct 167  Q
     |||||||||||||||||||    
T  23785240 agtttgactttattttatct 23785221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 73 - 196
Target Start/End: Original strand, 40122763 - 40122884
Alignment:
Q  73 ataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctctttt 172  Q
    |||||||||||| | ||| ||||||| | |||| ||| ||||||||| |||||| ||||||| || ||||||||| ||||||||||||||||||| |||     
T  40122763 ataagttgtttttagcttatttccattaactttttaggatagcttataaaaacaacttatagctt-tatgaaaacagtttgactttattttatct-tttg 40122860  T
Q  173 ttatagaaatagattatatataag 196  Q
    |||| ||||||| ||||| |||||    
T  40122861 ttattgaaatagcttatacataag 40122884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 121 - 199
Target Start/End: Original strand, 20192664 - 20192741
Alignment:
Q  121 aaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcac 199  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||| ||| ||||| |||||| ||||| ||||||||    
T  20192664 aaaacagcttatagattatatgaaaactgtttgactttattttatct-tttgttatataaatagcttatacataagcac 20192741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 36 - 193
Target Start/End: Original strand, 36646355 - 36646511
Alignment:
Q  36 tttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagt 135  Q
    |||| ||||| |||||||||| |||||||   |||| ||||| |||||| ||||| |||| |||| || ||||| ||||||||| ||||||  |||||      
T  36646355 tttgggagagcttatggaaaccacttatggcatgtccataagctgttttcatcttatttctataaactctctaggatagcttatgaaaacaagttataac 36646454  T
Q  136 ttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatat 193  Q
    ||||||||||||  ||  |||||||||||||| ||| | |||||||||| ||||||||    
T  36646455 ttatatgaaaacaattatactttattttatct-tttgtcatagaaatagcttatatat 36646511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 95 - 190
Target Start/End: Original strand, 24887315 - 24887409
Alignment:
Q  95 ccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattata 190  Q
    ||||||||| || || ||||||||| |||||||||| ||| ||||||||| || |||||||||||||||||||  || |||||||||||| |||||    
T  24887315 ccataagctctccaggatagcttatgaaaacagcttttagcttatatgaatacagtttgactttattttatct-attgttatagaaatagcttata 24887409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 141
Target Start/End: Complemental strand, 43115167 - 43115048
Alignment:
Q  22 cacttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttatta 121  Q
    |||||||||| |||||||  |||||||||||||||||||||||   |||| |||| ||||||| | ||| |||||||||||| || |  |||| | || |    
T  43115167 cacttgtgagattgtttggaagagtttatggaaacaacttatgacatgtccataacttgttttcagcttatttccataagctctcaatgatagttcatga 43115068  T
Q  122 aaacagcttatagtttatat 141  Q
    ||||| ||||||| ||||||    
T  43115067 aaacaacttatagcttatat 43115048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 41 - 183
Target Start/End: Complemental strand, 54775219 - 54775079
Alignment:
Q  41 gagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttata 140  Q
    ||||||||||||||| ||||||||   |||| ||||| || ||| ||||| ||| ||||| || || |  ||| ||||  ||||||||||||| || |||    
T  54775219 gagagtttatggaaataacttatgttatgtccataagctgctttcatcttattttcataaactctccatgataacttacgaaaacagcttataatt-ata 54775121  T
Q  141 tgaaaacggtttgactttattttatctcttttttatagaaata 183  Q
    | |||| |||||||||||||||||||| ||| |||||||||||    
T  54775120 taaaaatggtttgactttattttatct-tttgttatagaaata 54775079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 184
Target Start/End: Original strand, 36783382 - 36783454
Alignment:
Q  111 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatag 184  Q
    ||||||||| ||||||||| |||||||||||||||||  ||| |||||||||||||| |||  |||||||||||    
T  36783382 atagcttatgaaaacagctaatagtttatatgaaaacaattttactttattttatct-tttggtatagaaatag 36783454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 97 - 228
Target Start/End: Complemental strand, 1816619 - 1816488
Alignment:
Q  97 ataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttat-agaaatagattatatataa 195  Q
    ||||||| || || ||||||||| |||||| ||||||  |||||  ||||| ||||||||||||||||||| ||| |||| | |||||| ||||| || |    
T  1816619 ataagctctccagtatagcttatgaaaacaacttatatcttatacaaaaacagtttgactttattttatct-tttattataaaaaatagtttatacatta 1816521  T
Q  196 gcacatatatgagaaacacttatcctataagcg 228  Q
    || | ||||||| ||||| |||| |||||||||    
T  1816520 gctcttatatgataaacaattatgctataagcg 1816488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 111 - 167
Target Start/End: Complemental strand, 2201150 - 2201094
Alignment:
Q  111 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 167  Q
    |||||| || |||||||||||||| |||||||||||| |||||||||| ||||||||    
T  2201150 atagctaatgaaaacagcttatagcttatatgaaaacagtttgactttgttttatct 2201094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 23 - 210
Target Start/End: Complemental strand, 2321288 - 2321099
Alignment:
Q  23 acttgtgagcttgtttgtgagagtttatggaaacaactta-tgcattgtcaataagttgttttaatcttgtttccataagctttc--tagcatagcttat 119  Q
    ||||||||| ||||||| |||||||||||||||||||||| | |||   || ||||||||||| |  |  |||||||| ||| ||  ||| |||||||||    
T  2321288 acttgtgagattgtttgagagagtttatggaaacaacttattacatgcccattaagttgttttcagttaatttccataggctctctataggatagcttat 2321189  T
Q  120 -taaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaa 210  Q
      ||||||   | |||||||||||||||  ||||||||||| ||||||| ||| |||| ||| ||| |||||  ||||||||||||||||||    
T  2321188 gaaaaacaagatctagtttatatgaaaatagtttgacttta-tttatct-tttgttattgaattagcttatacgtaagcacatatatgagaa 2321099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 22 - 165
Target Start/End: Original strand, 14548680 - 14548823
Alignment:
Q  22 cacttgtgagcttgtttgtgagagtttatggaaacaacttatg-cattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttatt 120  Q
    ||||||||||  |||||| ||||| ||||| ||||||| |||| |||| | |||| | |||||| | ||| |||||||||||| || || ||| |||||     
T  14548680 cacttgtgagactgtttgagagagcttatgaaaacaacgtatgacatttt-aataggctgttttcagcttatttccataagctctccagaataacttatg 14548778  T
Q  121 aaaacagcttatagtttatatgaaaacggtttgactttattttat 165  Q
    |||||| ||||||| ||||||||||||  ||||| || |||||||    
T  14548779 aaaacaacttatagcttatatgaaaactttttgatttgattttat 14548823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 111 - 207
Target Start/End: Original strand, 20502116 - 20502219
Alignment:
Q  111 atagcttattaaaacagcttatagtttatatgaaaac-ggtttgactttattttatctcttttttatagaaataga------ttatatataagcacatat 203  Q
    ||||||||| ||||||||||||||  ||||||||||| | ||||||||||||| |||| ||| | |||||||||||      |||||||||||||| |||    
T  20502116 atagcttatgaaaacagcttatagcgtatatgaaaacagttttgactttatttgatctttttgtcatagaaatagaaatagcttatatataagcacttat 20502215  T
Q  204 atga 207  Q
    ||||    
T  20502216 atga 20502219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 96 - 172
Target Start/End: Original strand, 25453892 - 25453968
Alignment:
Q  96 cataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctctttt 172  Q
    ||||||||||| || |||| |||| |||| || |||||| ||||| |||||| ||||||||||||||||||| ||||    
T  25453892 cataagctttccaggatagtttatgaaaataggttataggttatacgaaaacagtttgactttattttatctgtttt 25453968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 167
Target Start/End: Complemental strand, 23315667 - 23315592
Alignment:
Q  92 tttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 167  Q
    |||||||||||| | ||| |||||||||  ||||| |||||||  |||||||||||  ||||||||||||||||||    
T  23315667 tttccataagctctttagaatagcttatggaaacatcttatagcctatatgaaaacaatttgactttattttatct 23315592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 131 - 190
Target Start/End: Original strand, 49586984 - 49587042
Alignment:
Q  131 atagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattata 190  Q
    |||| |||||||||||| ||||||||||||||||||| ||| |||||||||||| |||||    
T  49586984 atagcttatatgaaaacagtttgactttattttatct-tttgttatagaaatagcttata 49587042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 73 - 167
Target Start/End: Complemental strand, 24785265 - 24785171
Alignment:
Q  73 ataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 167  Q
    |||||||||||| | ||| ||| |||||||| || || ||||||||| ||||||  |||||| |||||  ||||| | |||||||||||||||||    
T  24785265 ataagttgtttttagcttatttacataagctctcgaggatagcttatgaaaacacgttatagattatacaaaaacagattgactttattttatct 24785171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 167
Target Start/End: Original strand, 31337435 - 31337505
Alignment:
Q  97 ataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 167  Q
    |||||||||||||  |||||||| || ||| ||||||  |||||| ||||| |||||||||||||||||||    
T  31337435 ataagctttctagattagcttatgaatacaacttataacttatataaaaacagtttgactttattttatct 31337505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 132
Target Start/End: Complemental strand, 37273233 - 37273135
Alignment:
Q  34 tgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttat 132  Q
    |||||| ||||| ||||||||||||||||||   |||| |||||||||||| | ||| |||||||||| | || |  ||||||||| ||||||| ||||    
T  37273233 tgtttgggagagcttatggaaacaacttatgacatgtccataagttgttttcaacttatttccataagttctccaagatagcttatgaaaacagtttat 37273135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 131 - 233
Target Start/End: Original strand, 41028919 - 41029020
Alignment:
Q  131 atagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaaacacttatcctataagcgat 230  Q
    |||| |||| ||||||| | ||||||||||||| ||| ||| |||||||||||| ||||| |||||||| ||||||| || || |||  ||||||| |||    
T  41028919 atagcttatttgaaaacagattgactttattttttct-tttgttatagaaatagcttatacataagcacttatatgataagcatttaagctataagagat 41029017  T
Q  231 aaa 233  Q
    |||    
T  41029018 aaa 41029020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 156 - 225
Target Start/End: Original strand, 16790181 - 16790249
Alignment:
Q  156 tttattttatctcttttttatagaaatagattatatataagcacatatatgagaaacacttatcctataa 225  Q
    |||||||||||| ||| |||||||||||  |||||||||||||| ||||||| |||| ||||| ||||||    
T  16790181 tttattttatct-tttgttatagaaataacttatatataagcacttatatgataaacgcttatgctataa 16790249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 98 - 147
Target Start/End: Original strand, 20874339 - 20874388
Alignment:
Q  98 taagctttctagcatagcttattaaaacagcttatagtttatatgaaaac 147  Q
    |||||| | ||| ||||||||| |||||||||||||||||||||||||||    
T  20874339 taagctatttaggatagcttatgaaaacagcttatagtttatatgaaaac 20874388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 126 - 183
Target Start/End: Complemental strand, 42038996 - 42038940
Alignment:
Q  126 agcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaata 183  Q
    ||||||||| ||||||||||||||||||||||||||  |||| ||| |||||||||||    
T  42038996 agcttatagcttatatgaaaacggtttgactttattagatct-tttgttatagaaata 42038940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 207
Target Start/End: Original strand, 24158532 - 24158645
Alignment:
Q  92 tttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatat 191  Q
    |||||||||||| || || ||||||||| ||||||||||||   ||||||  |||| |||| |||||| |||||   ||| |||||||||||  |||||     
T  24158532 tttccataagctctccaggatagcttatgaaaacagcttattacttatat--aaacagtttcactttactttattcatttgttatagaaataacttatac 24158629  T
Q  192 ataagcacatatatga 207  Q
    |||||||| |||||||    
T  24158630 ataagcacttatatga 24158645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 217
Target Start/End: Complemental strand, 27792932 - 27792789
Alignment:
Q  73 ataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctctttt 172  Q
    |||||||||||| | ||| |||| ||||||| |  |  |||| |||| |||||| |||  || |||||||||||  ||||||| ||||||||||| |||     
T  27792932 ataagttgttttcagcttatttctataagctctacatgatagtttatgaaaacaacttgcagcttatatgaaaatagtttgaccttattttatct-tttg 27792834  T
Q  173 ttatagaaatagattatatataagcacatatatgagaaacactta 217  Q
    || | ||||||| ||||| |||||||| ||||||| |||| ||||    
T  27792833 tttttgaaatagcttatacataagcacttatatgataaactctta 27792789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 164
Target Start/End: Original strand, 33965537 - 33965592
Alignment:
Q  111 atagcttattaaaacagcttatag--tttatatgaaaacggtttgactttatttta 164  Q
    ||||||||| |||||| |||||||  ||||||||||||| ||||||||||||||||    
T  33965537 atagcttatgaaaacatcttatagcttttatatgaaaacagtttgactttatttta 33965592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 225
Target Start/End: Original strand, 43116478 - 43116589
Alignment:
Q  113 agcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaaac 212  Q
    ||||||| |||||  ||||||| |||||||||||  |||||| || ||||||||| ||| |||||||||||| ||| | |||| ||| | ||||| ||||    
T  43116478 agcttatgaaaacgacttatagcttatatgaaaattgtttgatttgattttatct-tttgttatagaaatagcttacacataaacacttgtatgataaac 43116576  T
Q  213 acttatcctataa 225  Q
    | |||| ||||||    
T  43116577 atttatgctataa 43116589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 116 - 199
Target Start/End: Complemental strand, 1395688 - 1395606
Alignment:
Q  116 ttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcac 199  Q
    |||| ||||||| | |||| |||||||||||   |||||||||||||||||| ||| |||||||||||| ||||| ||| ||||    
T  1395688 ttatgaaaacagttcatagcttatatgaaaataatttgactttattttatct-tttgttatagaaatagcttatacatatgcac 1395606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 75 - 181
Target Start/End: Complemental strand, 2318703 - 2318596
Alignment:
Q  75 aagttgttttaatcttgtttccataagctttcta-gcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttt 173  Q
    |||||||||| | ||| |||| ||||||| || | | ||| ||||| |||||| ||||||||||||||||||||  ||||| || |||||||||  || |    
T  2318703 aagttgttttcagcttatttctataagctctccaagaataacttataaaaacaacttatagtttatatgaaaacaatttgatttgattttatcttgttgt 2318604  T
Q  174 tatagaaa 181  Q
    ||||||||    
T  2318603 tatagaaa 2318596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 95 - 162
Target Start/End: Complemental strand, 23249596 - 23249529
Alignment:
Q  95 ccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattt 162  Q
    ||||||||||||||  ||||||||| |||||| ||||||  |||||| ||||| ||||||||| ||||    
T  23249596 ccataagctttctaagatagcttatgaaaacaacttatatcttatataaaaacagtttgacttcattt 23249529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 111 - 190
Target Start/End: Complemental strand, 28306180 - 28306102
Alignment:
Q  111 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattata 190  Q
    ||||||||| |||||| ||| ||  |||||||||||| |||||||||||||||| || ||| ||||||| |||| |||||    
T  28306180 atagcttatgaaaacaacttgtaacttatatgaaaacagtttgactttatttta-ctttttgttatagagatagcttata 28306102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 47 - 162
Target Start/End: Complemental strand, 41452609 - 41452494
Alignment:
Q  47 ttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaa 146  Q
    |||| |||||||||||||   |||| ||||| |||||| | ||| |||||| ||  | || || ||||||||| ||||||||||| |  | |||||||||    
T  41452609 ttatagaaacaacttatgatatgtctataagctgttttcaccttatttccacaacttctccaggatagcttatgaaaacagcttacaactaatatgaaaa 41452510  T
Q  147 cggtttgactttattt 162  Q
    | ||||||||||||||    
T  41452509 cagtttgactttattt 41452494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 195
Target Start/End: Original strand, 2865718 - 2865789
Alignment:
Q  122 aaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataa 195  Q
    ||||| ||||||| ||||||||||||  ||||||||| |||||   |||| |||||||||||| ||||||||||    
T  2865718 aaacaacttataggttatatgaaaacaatttgactttgtttta--actttgttatagaaatagcttatatataa 2865789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 19679376 - 19679430
Alignment:
Q  111 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttat 165  Q
    |||| |||| |||||| ||||||| ||||| |||||| |||||||||||||||||    
T  19679376 atagtttataaaaacaacttatagcttataagaaaacagtttgactttattttat 19679430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 168
Target Start/End: Original strand, 21872302 - 21872376
Alignment:
Q  94 tccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctc 168  Q
    ||||||| ||||| || ||||||||| |||||| ||||||| |||||| ||||   |||||| ||||||||||||    
T  21872302 tccataaactttccaggatagcttatgaaaacaacttatagcttatatcaaaaaaatttgaccttattttatctc 21872376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 224
Target Start/End: Complemental strand, 31075717 - 31075604
Alignment:
Q  111 atagcttattaaaacagcttatagtttatatgaaaacggtttg-actttattttatctcttttttatagaaatagattatatataagcacatatatgaga 209  Q
    ||||||| | ||||||| |||||||||| ||||||||| |||| |||||| ||||| | ||| ||| | |||||| ||||||||||| || ||||||| |    
T  31075717 atagcttgtgaaaacagtttatagtttacatgaaaacgatttgtactttactttatat-tttgttaaataaatagcttatatataagtacttatatgaca 31075619  T
Q  210 aacacttatcctata 224  Q
    | | ||||| |||||    
T  31075618 agcgcttatactata 31075604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 147
Target Start/End: Original strand, 1217779 - 1217884
Alignment:
Q  42 agagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatat 141  Q
    |||| ||| ||||||| ||||||   |||| |||||||||||| |||||  || |||||| | || || ||||||||| |||||||||||||  ||| ||    
T  1217779 agagcttacggaaacagcttatgacatgtccataagttgttttcatcttactttcataagttctcaaggatagcttatgaaaacagcttataacttacat 1217878  T
Q  142 gaaaac 147  Q
    ||||||    
T  1217879 gaaaac 1217884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 166
Target Start/End: Original strand, 3467446 - 3467491
Alignment:
Q  121 aaaacagcttatagtttatatgaaaacggtttgactttattttatc 166  Q
    |||||| |||||||| |||||||||||  |||||||||||||||||    
T  3467446 aaaacaacttatagtctatatgaaaacaatttgactttattttatc 3467491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 164
Target Start/End: Original strand, 33405215 - 33405268
Alignment:
Q  111 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttatttta 164  Q
    ||||||||| |||||||||||||| ||||||||||||   || |||||||||||    
T  33405215 atagcttatgaaaacagcttatagcttatatgaaaacaaattaactttatttta 33405268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 167
Target Start/End: Complemental strand, 54965517 - 54965472
Alignment:
Q  122 aaacagcttatagtttatatgaaaacggtttgactttattttatct 167  Q
    ||||| ||| |||||||||||||||  |||||||||||||||||||    
T  54965517 aaacaacttgtagtttatatgaaaattgtttgactttattttatct 54965472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 197
Target Start/End: Original strand, 8007761 - 8007828
Alignment:
Q  129 ttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagc 197  Q
    |||||| |||||||| ||| ||||||||||| ||||||| ||| ||||||||| || ||||| ||||||    
T  8007761 ttatagcttatatgataacagtttgactttactttatct-tttgttatagaaacagcttatacataagc 8007828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 121 - 205
Target Start/End: Original strand, 12923383 - 12923466
Alignment:
Q  121 aaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatat 205  Q
    |||||| ||||||| ||||| |||| | ||||||||||||||||||| ||| ||| || ||||| ||||| | |||||| |||||    
T  12923383 aaaacaacttatagcttataagaaagcagtttgactttattttatct-tttattacagcaatagcttatacacaagcacttatat 12923466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 189
Target Start/End: Original strand, 15304417 - 15304472
Alignment:
Q  133 agtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattat 189  Q
    |||||||||||||||  ||| |||||||||||||| ||| |||||||||||| ||||    
T  15304417 agtttatatgaaaacaatttaactttattttatct-tttgttatagaaatagcttat 15304472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 207
Target Start/End: Complemental strand, 22232848 - 22232753
Alignment:
Q  111 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatga 207  Q
    ||||||||| |||| ||||||    |||||||||||| ||||||||||||||||||  ||| ||||| |||||| ||||| || ||||  |||||||    
T  22232848 atagcttatgaaaatagcttacgacttatatgaaaacagtttgactttattttatc-atttgttatataaatagcttatacatgagcatttatatga 22232753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 183
Target Start/End: Original strand, 24235731 - 24235802
Alignment:
Q  111 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaata 183  Q
    ||||||||| |||||| ||||||| ||||||  |||  |||||||||||| |||||| ||| |||||||||||    
T  24235731 atagcttatgaaaacaacttatagcttatattcaaatagtttgactttatattatct-tttgttatagaaata 24235802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 139 - 207
Target Start/End: Original strand, 44374720 - 44374787
Alignment:
Q  139 tatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatga 207  Q
    |||||||||  |||||||||||||||||| ||| ||| ||| |||| ||||| |||||||| |||||||    
T  44374720 tatgaaaacaatttgactttattttatct-tttgttaaagatatagcttatacataagcacttatatga 44374787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 60; Significance: 1e-25; HSPs: 47)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 23 - 190
Target Start/End: Original strand, 281808 - 281974
Alignment:
Q  23 acttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaa 122  Q
    |||||||||  |||||| ||||| | |||||| |||||||||   |||| |||||||||||| | ||| ||||||| |||| ||||| ||||||||| ||    
T  281808 acttgtgagactgtttgggagagctaatggaagcaacttatgacatgtctataagttgttttcagcttatttccatgagctctctaggatagcttatgaa 281907  T
Q  123 aacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattata 190  Q
     ||||||||||| ||||||||||||   ||||||||||||||||| ||| |||||| ||||| |||||    
T  281908 cacagcttatagcttatatgaaaacaagttgactttattttatct-tttgttataggaatagcttata 281974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 110 - 216
Target Start/End: Complemental strand, 10016568 - 10016463
Alignment:
Q  110 catagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgaga 209  Q
    |||||||||| |||||||||||| | |||||||| ||| |||| | |||||||||||| |||  | ||||||||| ||||| ||||| || |||||||||    
T  10016568 catagcttatgaaaacagcttatggcttatatgagaacagtttaaatttattttatct-tttggtttagaaatagcttatacataaggacttatatgaga 10016470  T
Q  210 aacactt 216  Q
    |||||||    
T  10016469 aacactt 10016463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 47 - 184
Target Start/End: Complemental strand, 2117489 - 2117353
Alignment:
Q  47 ttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaa 146  Q
    |||| ||||||| |||||   |||| ||||| |||||| | ||| |||| ||||||| ||||| ||| ||||| |||||| ||||||| |||||||||||    
T  2117489 ttatagaaacaatttatggcatgtctataagctgtttttagcttatttcaataagctctctaggataacttatgaaaacaacttatagattatatgaaaa 2117390  T
Q  147 cggtttgactttattttatctcttttttatagaaatag 184  Q
      |||||||||| ||||||| |||| | ||||||||||    
T  2117389 tagtttgactttgttttatc-ctttgtcatagaaatag 2117353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 115 - 167
Target Start/End: Original strand, 3181120 - 3181172
Alignment:
Q  115 cttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 167  Q
    ||||| ||||||| |||| ||||||||||||||||||||||||||||||||||    
T  3181120 cttatgaaaacagtttatggtttatatgaaaacggtttgactttattttatct 3181172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 115 - 198
Target Start/End: Original strand, 29274281 - 29274363
Alignment:
Q  115 cttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagca 198  Q
    ||||| ||||||| |||||| ||||||||||||  |||||||||||||||||| |||  ||||||||||| ||||| |||||||    
T  29274281 cttatgaaaacagtttatagcttatatgaaaacaatttgactttattttatct-tttgctatagaaatagcttatacataagca 29274363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 41 - 183
Target Start/End: Complemental strand, 5329065 - 5328925
Alignment:
Q  41 gagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttata 140  Q
    ||||||||||||||| ||||||||   |||| ||||| || ||| ||||| ||| ||||| || || |  ||| ||||  ||||||||||||| || |||    
T  5329065 gagagtttatggaaataacttatgttatgtccataagctgctttcatcttattttcataaactctccatgataacttacgaaaacagcttataatt-ata 5328967  T
Q  141 tgaaaacggtttgactttattttatctcttttttatagaaata 183  Q
    | |||| |||||||||||||||||||| ||| |||||||||||    
T  5328966 taaaaatggtttgactttattttatct-tttgttatagaaata 5328925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 121 - 230
Target Start/End: Complemental strand, 5550144 - 5550036
Alignment:
Q  121 aaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaaacacttatcc 220  Q
    |||||||||||||| ||||||||||||  ||||||||||| ||||||| || |||| ||||||   |||| |||||||| |||||||  | | ||||| |    
T  5550144 aaaacagcttatagcttatatgaaaacaatttgactttatgttatctc-ttattatcgaaatactatatacataagcacttatatgaccagcgcttatgc 5550046  T
Q  221 tataagcgat 230  Q
    ||||||||||    
T  5550045 tataagcgat 5550036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 115 - 196
Target Start/End: Complemental strand, 22742384 - 22742304
Alignment:
Q  115 cttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataag 196  Q
    ||||| |||| ||||||||| ||||||||||||  ||||||||||||||||| |||| ||||| |||||| ||||| |||||    
T  22742384 cttataaaaatagcttatagcttatatgaaaacaatttgactttattttatc-ctttgttatacaaatagcttatagataag 22742304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 112 - 184
Target Start/End: Original strand, 2027455 - 2027526
Alignment:
Q  112 tagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatag 184  Q
    |||||||| | |||||||||||| |||||||||||  ||||||||||||||||||| ||| ||||| ||||||    
T  2027455 tagcttatgagaacagcttataggttatatgaaaatagtttgactttattttatct-tttgttataaaaatag 2027526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 111 - 207
Target Start/End: Complemental strand, 4248980 - 4248885
Alignment:
Q  111 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatga 207  Q
    ||||||||  |||||| ||||| |||||||  ||| |  |||||||||||||||||| ||| |||| ||||||| |||||||||||||| |||||||    
T  4248980 atagcttaggaaaacaccttattgtttatacaaaatcaatttgactttattttatct-tttgttattgaaatagcttatatataagcacttatatga 4248885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 129 - 217
Target Start/End: Original strand, 8470054 - 8470141
Alignment:
Q  129 ttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaaacactta 217  Q
    ||||||||| ||||||||||||||||||||||||| ||  ||| ||| |||||||| |||| ||||||||| |||| || || ||||||    
T  8470054 ttatagtttttatgaaaacggtttgactttattttctc-atttgttacagaaatagcttatttataagcacttatacgataagcactta 8470141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 42 - 205
Target Start/End: Complemental strand, 9027669 - 9027506
Alignment:
Q  42 agagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagct-ttctagcatagcttattaaaacagcttatagtttata 140  Q
    |||| ||||||||| ||||||||   |||| |||||||||||| | ||| ||| |||||||| |||| | |||| |||   || ||||||||   |||||    
T  9027669 agagcttatggaaataacttatgacatgtccataagttgttttcagcttattttcataagctcttcttggataggttaacgaaccagcttattacttata 9027570  T
Q  141 tgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatat 205  Q
    | ||||| ||||||||||||||||||| | | || ||||||||| ||||| |||||||| |||||    
T  9027569 ttaaaacagtttgactttattttatct-tctattgtagaaatagcttatagataagcacttatat 9027506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 122 - 226
Target Start/End: Original strand, 10452419 - 10452522
Alignment:
Q  122 aaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaaacacttatcct 221  Q
    ||||| ||||||| |||||||||||  |||||| |||||||||| | ||| |||||||||||| ||||| ||||||||  |||||| |  ||||||| ||    
T  10452419 aaacaacttatagcttatatgaaaatagtttgattttattttatat-tttgttatagaaatagcttatacataagcactgatatgatagccacttatgct 10452517  T
Q  222 ataag 226  Q
    |||||    
T  10452518 ataag 10452522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 47 - 147
Target Start/End: Original strand, 28088207 - 28088306
Alignment:
Q  47 ttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaa 146  Q
    ||||||||||||||||| ||| ||| ||| |||||||| | ||| ||||||| |||| || |  ||||||||| ||||||| |||||| |||||||||||    
T  28088207 ttatggaaacaacttatacat-gtctataggttgttttgagcttatttccatgagctctccatgatagcttatgaaaacagtttatagcttatatgaaaa 28088305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 67 - 167
Target Start/End: Original strand, 31671078 - 31671178
Alignment:
Q  67 ttgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatc 166  Q
    ||||| || ||||||||| | ||| ||| |||||||| ||||| |||| |||  |||||||||||||| ||||||||||||  ||| ||||| |||||||    
T  31671078 ttgtctatcagttgttttcagcttattttcataagctatctaggatagtttacgaaaacagcttatagcttatatgaaaacaatttaactttgttttatc 31671177  T
Q  167 t 167  Q
    |    
T  31671178 t 31671178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 167
Target Start/End: Original strand, 3785725 - 3785804
Alignment:
Q  88 cttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 167  Q
    |||||||  ||||||| || || ||||||||  |||||||||||||| ||||| |||||| |||| ||||||||||||||    
T  3785725 cttgtttttataagctctccagaatagcttacaaaaacagcttatagcttatacgaaaacagtttaactttattttatct 3785804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 207
Target Start/End: Original strand, 8420154 - 8420340
Alignment:
Q  20 aacacttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttat 119  Q
    ||||||||||||  |||| ||||||| |||| |||| | ||||||   |||| | ||| | |||| | ||| |||||||||||| || |  ||||||||     
T  8420154 aacacttgtgagactgttagtgagagcttatagaaatagcttatgacatgtccacaagctattttcaacttatttccataagctctccattatagcttac 8420253  T
Q  120 taaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatga 207  Q
     | ||||||||||| ||||||| || || ||||||||||||||||||  ||| ||| |||||||  || || |||||||| |||||||    
T  8420254 gagaacagcttatattttatataaacacagtttgactttattttatc-atttattaaagaaataacttgtacataagcacttatatga 8420340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 120 - 183
Target Start/End: Original strand, 34429747 - 34429809
Alignment:
Q  120 taaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaata 183  Q
    ||||||| ||||||||||||| |||||| ||| |||||||||||||||| || |||||||||||    
T  34429747 taaaacaacttatagtttataagaaaacagttagactttattttatctc-ttattatagaaata 34429809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 212
Target Start/End: Original strand, 5637313 - 5637375
Alignment:
Q  151 ttgactttattttatc-tcttttttatagaaatagattatatataagcacatatatgagaaac 212  Q
    |||||||||||||||| ||||||| |||||||||| ||||| |||||||| ||||||| ||||    
T  5637313 ttgactttattttatcttctttttgatagaaatagtttataaataagcacttatatgataaac 5637375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 189
Target Start/End: Original strand, 9093528 - 9093681
Alignment:
Q  36 tttgtgagagtttatggaaacaacttatg-cattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatag 134  Q
    |||||||||| ||||| ||| | |||||| |||||| |||||  |||||| | ||| ||| | |||| | ||||  | ||||||| ||||||||||||||    
T  9093528 tttgtgagagcttatgaaaatagcttatgacattgttaataacctgttttcagcttattttcttaagttctctaagacagcttatgaaaacagcttatag 9093627  T
Q  135 tttatatgaaaacggtttgactttattttatctcttttttatagaaatagattat 189  Q
     ||||| ||||||  ||| |||||||||||||| |||  ||||||||||| ||||    
T  9093628 cttatacgaaaacaatttaactttattttatct-tttgatatagaaatagcttat 9093681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 73 - 207
Target Start/End: Complemental strand, 10154281 - 10154148
Alignment:
Q  73 ataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctctttt 172  Q
    |||||||||||| |  || ||||||||||||||  |   |||| ||| |||  ||||||||  |||||||||||| ||||||||||||||||||| ||||    
T  10154281 ataagttgttttcagtttatttccataagcttttcatgctagcctatgaaagtagcttataacttatatgaaaacagtttgactttattttatct-tttt 10154183  T
Q  173 ttatagaaatagattatatataagcacatatatga 207  Q
     |||||||| || || || | |||||| |||||||    
T  10154182 ctatagaaacagcttgtacagaagcacttatatga 10154148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 146
Target Start/End: Original strand, 10616514 - 10616624
Alignment:
Q  36 tttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagt 135  Q
    |||| ||||| ||||||||||||||||||   ||||  |||||||| || | ||| |||  ||||||| || |  ||||||||||||||| ||||||| |    
T  10616514 tttgggagagcttatggaaacaacttatgacatgtccgtaagttgtgttcagcttatttttataagctctccaaaatagcttattaaaacggcttatatt 10616613  T
Q  136 ttatatgaaaa 146  Q
    |||||||||||    
T  10616614 ttatatgaaaa 10616624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 111 - 184
Target Start/End: Complemental strand, 1403018 - 1402946
Alignment:
Q  111 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatag 184  Q
    ||||||||| ||||||  |||||| |||||||||||  |||| |||||||||||||| ||| ||||||||||||    
T  1403018 atagcttatgaaaacaatttatagcttatatgaaaatagtttaactttattttatct-tttgttatagaaatag 1402946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 149 - 226
Target Start/End: Complemental strand, 2514686 - 2514610
Alignment:
Q  149 gtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaaacacttatcctataag 226  Q
    ||||||||||||||||||| ||| |||||||||||| ||||| |||||||| || |||| || || |||| |||||||    
T  2514686 gtttgactttattttatct-tttattatagaaatagcttatacataagcacttacatgataagcatttatgctataag 2514610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 111 - 164
Target Start/End: Complemental strand, 5623178 - 5623125
Alignment:
Q  111 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttatttta 164  Q
    ||||||||| |||||| ||||||||||||||||||||  |||| ||||||||||    
T  5623178 atagcttatgaaaacaacttatagtttatatgaaaactatttggctttatttta 5623125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 103
Target Start/End: Original strand, 2460111 - 2460191
Alignment:
Q  23 acttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagct 103  Q
    |||||||||  |||||| ||||| ||||||||||||||||||   ||||  ||||||||||| | ||| ||||||||||||    
T  2460111 acttgtgagactgtttgagagagcttatggaaacaacttatgacatgtctttaagttgttttcaacttatttccataagct 2460191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 183
Target Start/End: Complemental strand, 4006736 - 4006665
Alignment:
Q  111 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaata 183  Q
    ||||||||| |||||| ||||||| |||||| |||||  |||||||||||||||||  ||| |||||||||||    
T  4006736 atagcttatgaaaacaacttatagcttatataaaaacaatttgactttattttatc-atttgttatagaaata 4006665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 167
Target Start/End: Complemental strand, 4081013 - 4080884
Alignment:
Q  36 tttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagt 135  Q
    |||| |||| |||||| |||||||||||||  |||  |||||||||||| | ||| ||||  |||||| |  || ||||||| |  ||| |||||||| |    
T  4081013 tttgagagattttatgaaaacaacttatgccatgttcataagttgttttcaacttatttc--taagctctgaagaatagcttctgcaaaaagcttataat 4080916  T
Q  136 ttatatgaaaacggtttgactttattttatct 167  Q
    |||||||||||| |||||||||| ||| ||||    
T  4080915 ttatatgaaaaccgtttgactttgtttcatct 4080884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 143 - 199
Target Start/End: Complemental strand, 24774748 - 24774693
Alignment:
Q  143 aaaacggtttgactttattttatctcttttttatagaaatagattatatataagcac 199  Q
    ||||| ||||||||||||||||| | ||| |||||||||||| ||||||||||||||    
T  24774748 aaaacagtttgactttattttatat-tttgttatagaaatagtttatatataagcac 24774693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 226
Target Start/End: Original strand, 32386578 - 32386725
Alignment:
Q  78 ttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttata 177  Q
    ||||||| | ||| ||| |||||||| || || ||| || || |||||| | ||||  ||||||||||||  |||||| ||||||||||| ||| |||      
T  32386578 ttgttttcagcttattttcataagctctccaggataactaatgaaaacaacgtataccttatatgaaaacaatttgaccttattttatct-tttcttagt 32386676  T
Q  178 gaaatagattatatataagcacatatatgagaaacacttatcctataag 226  Q
    |||||||  |||| |||||||| ||||||| ||||| |||| |||||||    
T  32386677 gaaatagtctatacataagcacttatatgataaacatttatactataag 32386725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 111 - 182
Target Start/End: Complemental strand, 2112222 - 2112152
Alignment:
Q  111 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaat 182  Q
    |||| |||| |||||| ||||||||||||||| ||||  ||| |||||||||||||| ||| ||||||||||    
T  2112222 atagtttatgaaaacaacttatagtttatatg-aaacaatttaactttattttatctttttattatagaaat 2112152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 42 - 205
Target Start/End: Complemental strand, 7148757 - 7148596
Alignment:
Q  42 agagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatat 141  Q
    |||| ||| ||||||||||||||  ||||| ||||| | |||| | ||| ||| |||||||| || ||  ||||||||||||| | ||||||| ||||||    
T  7148757 agagcttacggaaacaacttatgacttgtccataagctattttcaacttattttcataagctctccagggtagcttattaaaataccttatagcttatat 7148658  T
Q  142 gaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatat 205  Q
    | |||  ||| || ||| |||||||| ||  || ||||||||| ||||| |||||||| |||||    
T  7148657 gtaaagagttgga-ttttttttatct-ttagttgtagaaatagcttatacataagcacttatat 7148596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 99 - 162
Target Start/End: Complemental strand, 10032605 - 10032542
Alignment:
Q  99 aagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattt 162  Q
    |||||| |||||||||||||| || ||||||||||| ||||||||||   ||||| ||||||||    
T  10032605 aagcttgctagcatagcttataaagacagcttatagcttatatgaaattagtttgcctttattt 10032542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 128 - 183
Target Start/End: Original strand, 24836264 - 24836318
Alignment:
Q  128 cttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaata 183  Q
    ||||||||||||| ||||||  |||||||||||||||||| ||| |||||||||||    
T  24836264 cttatagtttatacgaaaacaatttgactttattttatct-tttgttatagaaata 24836318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 47 - 166
Target Start/End: Complemental strand, 30523745 - 30523627
Alignment:
Q  47 ttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaa 146  Q
    |||||||||||||||||||  |||  ||||| |||||| | ||  |||| |||| || || || ||||||||| |||| | ||||||| ||||||||| |    
T  30523745 ttatggaaacaacttatgccatgttcataagctgttttcaactaatttctataacctctcaaggatagcttatgaaaa-aacttatagcttatatgaaga 30523647  T
Q  147 cggtttgactttattttatc 166  Q
    || |||||| ||||||||||    
T  30523646 cgatttgacattattttatc 30523627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 23 - 225
Target Start/End: Complemental strand, 32976088 - 32975887
Alignment:
Q  23 acttgtgagcttgtttgtgagagtttatggaaacaacttatg-cattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttatta 121  Q
    |||||||||  ||||||  |||| |||| |||||| |||||| |||| || ||||| |||||| | | || ||| |||| | ||| || ||||||||| |    
T  32976088 acttgtgagactgtttggaagagcttatagaaacagcttatgacatt-tccataagctgttttcagcgtgcttctataatcattccaggatagcttatga 32975990  T
Q  122 aaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaaacacttatcct 221  Q
    ||||| ||||| | || |||  |||| ||||||||||||||||| | ||| ||| |||||||  ||||| |||| ||| |||||||||| | ||||| ||    
T  32975989 aaacaacttattgcttctattgaaacagtttgactttattttatat-tttgttacagaaataacttatacataaacacttatatgagaagcgcttatgct 32975891  T
Q  222 ataa 225  Q
    ||||    
T  32975890 ataa 32975887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 195
Target Start/End: Original strand, 33787774 - 33787876
Alignment:
Q  92 tttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatat 191  Q
    |||||||||||| || |  ||| ||||| |||||||||||||  |||||||||| |  ||||||||| |||||| | ||| |||||||||||| |||||     
T  33787774 tttccataagctctccaagataacttatgaaaacagcttataacttatatgaaatcaatttgactttgttttatat-tttgttatagaaatagtttatac 33787872  T
Q  192 ataa 195  Q
    ||||    
T  33787873 ataa 33787876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 228
Target Start/End: Original strand, 3204593 - 3204706
Alignment:
Q  114 gcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaaaca 213  Q
    |||||| ||||||  || ||| |||||||||||| ||| ||||||||||||||| ||| |||||||| ||| ||||   ||||||| ||||||| | | |    
T  3204593 gcttatgaaaacaatttctagcttatatgaaaacagttcgactttattttatct-tttattatagaagtagtttattcgtaagcacttatatgatataaa 3204691  T
Q  214 cttatcctataagcg 228  Q
    ||||  |||||||||    
T  3204692 cttacactataagcg 3204706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 184
Target Start/End: Original strand, 4247077 - 4247181
Alignment:
Q  79 tgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatag 178  Q
    |||||| | ||||||| ||||||| |||||| | | ||||| |||||||||||||  |||||||||||| |    ||| |||||||||| ||| ||||||    
T  4247077 tgttttcagcttgttttcataagccttctaggacaacttatgaaaacagcttataacttatatgaaaacagaccaactctattttatct-tttgttatag 4247175  T
Q  179 aaatag 184  Q
    ||||||    
T  4247176 aaatag 4247181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 189
Target Start/End: Complemental strand, 24782096 - 24782004
Alignment:
Q  96 cataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattat 189  Q
    |||||||| || || |||| ||||||||  ||||||||  ||||||||||||  ||||| || ||||||||| ||| |||||||||||| ||||    
T  24782096 cataagctctcaaggatagtttattaaagtagcttataacttatatgaaaacaatttgatttgattttatct-tttgttatagaaatagcttat 24782004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 190
Target Start/End: Complemental strand, 31624278 - 31624202
Alignment:
Q  113 agcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattata 190  Q
    ||||||||||||||||| |||| ||||| ||||||  ||| |  ||||||||||| ||| |||||||||||| |||||    
T  31624278 agcttattaaaacagctaatagattatacgaaaacaatttaaacttattttatct-tttgttatagaaatagcttata 31624202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 167
Target Start/End: Complemental strand, 33887941 - 33887796
Alignment:
Q  22 cacttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttatta 121  Q
    |||||||||  ||||||| |||| |||||| ||| | ||||||   |||  | |||||||||| | ||| ||||||||||| ||  || ||||||||| |    
T  33887941 cacttgtgacattgtttgagagaatttatgaaaatagcttatgacatgttcacaagttgttttcaacttatttccataagcatttcaggatagcttatga 33887842  T
Q  122 aaacagcttatagtttatatgaaaacggtttgactttattttatct 167  Q
    |||||| |||| | |||||  ||||| |||||| ||| ||||||||    
T  33887841 aaacagtttattgattatactaaaacagtttgagtttgttttatct 33887796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 147
Target Start/End: Complemental strand, 4246432 - 4246396
Alignment:
Q  111 atagcttattaaaacagcttatagtttatatgaaaac 147  Q
    ||||||||| |||||||||||||| ||||||||||||    
T  4246432 atagcttatgaaaacagcttatagattatatgaaaac 4246396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 197
Target Start/End: Complemental strand, 6654655 - 6654552
Alignment:
Q  93 ttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatata 192  Q
    ||||||||||| || |  ||||| ||||||||||||||| |||||| |  |||||  |||||||| ||||||| | ||| |||||||||||  ||||| |    
T  6654655 ttccataagctctccaagatagcatattaaaacagcttaaagtttaaacaaaaacaatttgacttaattttat-tatttgttatagaaataacttataca 6654557  T
Q  193 taagc 197  Q
    |||||    
T  6654556 taagc 6654552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 167
Target Start/End: Complemental strand, 25426192 - 25426136
Alignment:
Q  111 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 167  Q
    ||||||||| |||| ||||||||| ||| |||||| |  ||||||||||||||||||    
T  25426192 atagcttataaaaatagcttatagcttacatgaaagcaatttgactttattttatct 25426136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 167
Target Start/End: Original strand, 28660788 - 28660864
Alignment:
Q  91 gtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 167  Q
    |||||||||||||||  || |||| |||| ||||||  ||||| ||||||||||||   ||| ||||||||||||||    
T  28660788 gtttccataagcttttaaggatagtttatgaaaacaatttataatttatatgaaaataatttaactttattttatct 28660864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 32917310 - 32917266
Alignment:
Q  20 aacacttgtgagcttgtttgtgagagtttatggaaacaacttatg 64  Q
    ||||||||||||  |||||| ||||| ||||||||||||||||||    
T  32917310 aacacttgtgagactgtttgggagagcttatggaaacaacttatg 32917266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 2e-24; HSPs: 56)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 74 - 207
Target Start/End: Original strand, 28586777 - 28586909
Alignment:
Q  74 taagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttt 173  Q
    |||| |||||| | ||| |||| ||||||| ||||| ||||||  | ||||||||||||| ||||||||||||| ||||||||||||||||||| ||| |    
T  28586777 taagctgttttcagcttatttcgataagctctctaggatagctcgtcaaaacagcttataatttatatgaaaacagtttgactttattttatct-tttgt 28586875  T
Q  174 tatagaaatagattatatataagcacatatatga 207  Q
    |||||||||||  |||| |||| |||||||||||    
T  28586876 tatagaaatagtgtatacataaccacatatatga 28586909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 42 - 198
Target Start/End: Complemental strand, 16889826 - 16889671
Alignment:
Q  42 agagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatat 141  Q
    |||| ||||| ||||| ||||| |  |||| |||||||||||| |  || ||||||||| || ||||||||||||||| |||||||||||||| || |||    
T  16889826 agagattatgaaaacagcttatactatgtctataagttgttttcagattatttccataaactctctagcatagcttatgaaaacagcttatagcttctat 16889727  T
Q  142 gaaaacggtttgactttattttatctcttttttatagaaatagattatatataagca 198  Q
     ||||| ||||||||| | ||||||| ||| |||| ||||||| ||||| |||||||    
T  16889726 aaaaacagtttgacttaagtttatct-tttgttatggaaatagcttatacataagca 16889671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 135 - 227
Target Start/End: Original strand, 20982207 - 20982298
Alignment:
Q  135 tttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaaacacttatcctataagc 227  Q
    ||||||||||||||| |||||||||||||||| |||| |||||||||||| ||||| |||||||| ||||||| || ||||||| ||||||||    
T  20982207 tttatatgaaaacgggttgactttattttatc-ctttgttatagaaatagcttatacataagcacttatatgataagcacttatgctataagc 20982298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 41 - 184
Target Start/End: Complemental strand, 14295598 - 14295456
Alignment:
Q  41 gagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttata 140  Q
    ||||| ||||| ||||| ||||||   |||| ||||| |||||| | |||  ||| | ||||| || || ||||||||  |||||||||||||| |||||    
T  14295598 gagagcttatgaaaacagcttatgatatgtcgataagctgttttcagcttacttctaaaagctctccaggatagcttacgaaaacagcttatagcttata 14295499  T
Q  141 tgaaaacggtttgactttattttatctcttttttatagaaatag 184  Q
    ||||||| ||||||||||||||||||| ||| ||||||||||||    
T  14295498 tgaaaacagtttgactttattttatct-tttgttatagaaatag 14295456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 25 - 183
Target Start/End: Original strand, 37588322 - 37588479
Alignment:
Q  25 ttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaa 124  Q
    |||||||  |||||| ||||| ||||| | ||||| |||| | ||| |||||| |||||| | ||| |||||||||||| || || ||| ||||| ||||    
T  37588322 ttgtgagactgtttgagagagcttatgaatacaacctatgaaatgttaataagctgttttcagcttatttccataagctctccagaataacttatgaaaa 37588421  T
Q  125 cagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaata 183  Q
    || ||||||| ||||||||||||  ||||| || ||||||||| ||| |||||||||||    
T  37588422 caacttatagcttatatgaaaactttttgatttgattttatct-tttattatagaaata 37588479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 66 - 199
Target Start/End: Complemental strand, 12975413 - 12975282
Alignment:
Q  66 attgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttat 165  Q
    |||||| |||||||||||| | ||| || ||||||||| || |  ||||||||| || ||||||||||| ||||||||||||  ||||| ||||||||||    
T  12975413 attgtccataagttgttttcaacttatt-ccataagctctccaagatagcttatgaacacagcttatagcttatatgaaaacaatttgattttattttat 12975315  T
Q  166 ctcttttttatagaaatagattatatataagcac 199  Q
     ||||| |||||| ||||| || |||||||||||    
T  12975314 -tctttgttataggaatagtttgtatataagcac 12975282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 113 - 228
Target Start/End: Complemental strand, 39128659 - 39128545
Alignment:
Q  113 agcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaaac 212  Q
    ||||||| |||| || ||||||||||| ||| |||  |||||||||||||||||| ||| |||||||| ||| ||||| |||||||||||||| | |||     
T  39128659 agcttataaaaatagtttatagtttatttgagaacaatttgactttattttatct-tttgttatagaattagcttatacataagcacatatattaaaaaa 39128561  T
Q  213 acttatcctataagcg 228  Q
     ||||| |||||||||    
T  39128560 gcttatgctataagcg 39128545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 73 - 163
Target Start/End: Complemental strand, 18875421 - 18875331
Alignment:
Q  73 ataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttatttt 163  Q
    |||||||||||| | |||||||||||||||| || || ||| |||||||||||||||||||  || ||||||| |  ||||||||||||||    
T  18875421 ataagttgttttcaacttgtttccataagctctccaggatatcttattaaaacagcttataacttgtatgaaatcaatttgactttatttt 18875331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 115 - 227
Target Start/End: Original strand, 9202800 - 9202912
Alignment:
Q  115 cttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatat-atgagaaaca 213  Q
    ||||| |||||||||||| | ||||||||||||  ||| |||||||||||||| |||  || |||||||| |||||||||||||| ||| |||| |||||    
T  9202800 cttatgaaaacagcttattgcttatatgaaaacaatttaactttattttatct-tttgctacagaaatagcttatatataagcacttatcatgataaaca 9202898  T
Q  214 cttatcctataagc 227  Q
    ||| | ||||||||    
T  9202899 cttgtgctataagc 9202912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 36 - 189
Target Start/End: Complemental strand, 35960510 - 35960359
Alignment:
Q  36 tttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagt 135  Q
    |||| ||||| |||||||| ||||||| |   |||| ||||| |||||| | ||| ||||  || |||||| || ||||||||| ||| || ||||||||    
T  35960510 tttgagagagcttatggaagcaacttacgacatgtccataagatgtttttagcttatttctttacgctttccaggatagcttatgaaatcaacttatagt 35960411  T
Q  136 ttatatgaaaacggtttgactttattttatctcttttttatagaaatagattat 189  Q
    ||||||| |||  ||||||||||||||||||| ||| |||||||||||| ||||    
T  35960410 ttatatg-aaatagtttgactttattttatct-tttattatagaaatagtttat 35960359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 65 - 197
Target Start/End: Complemental strand, 12425639 - 12425508
Alignment:
Q  65 cattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttatttta 164  Q
    |||||||||||||||||||| | ||| ||| |||||| | || |  ||||||| | |||||||||||||| ||||| ||||||  ||| |||||||||||    
T  12425639 cattgtcaataagttgttttcaacttattttcataagttctccaagatagcttgtgaaaacagcttatagcttatacgaaaacaatttaactttatttta 12425540  T
Q  165 tctcttttttatagaaatagattatatataagc 197  Q
    ||| |||  |||| |||||| ||||| ||||||    
T  12425539 tct-tttactatataaatagtttatacataagc 12425508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 116 - 167
Target Start/End: Original strand, 32059642 - 32059693
Alignment:
Q  116 ttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 167  Q
    |||| |||||||||||||| |||||||||||| |||||||||||||||||||    
T  32059642 ttatgaaaacagcttatagcttatatgaaaacagtttgactttattttatct 32059693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 197
Target Start/End: Complemental strand, 32172764 - 32172590
Alignment:
Q  22 cacttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttatta 121  Q
    |||||||||| | ||||| ||||| ||||||||||||||||||   |||| |||||   |||| | ||| ||||||| || | |  |  ||||||||| |    
T  32172764 cacttgtgagatagtttgggagagcttatggaaacaacttatgacatgtccataagccattttcagcttatttccattagttcttcatgatagcttatga 32172665  T
Q  122 aaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagc 197  Q
    ||||||||||||| ||||||| ||||   ||||||| ||||||||| ||| || ||||||||| ||||| ||||||    
T  32172664 aaacagcttatagcttatatgtaaacaacttgacttcattttatct-tttgttgtagaaatagtttatacataagc 32172590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 136 - 226
Target Start/End: Original strand, 37063147 - 37063236
Alignment:
Q  136 ttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaaacacttatcctataag 226  Q
    |||||||||||  ||||||||||||||||||| ||| |||||||||||| ||||| |||||||  ||||||| || || |||| |||||||    
T  37063147 ttatatgaaaatagtttgactttattttatct-tttgttatagaaatagtttatacataagcatttatatgacaagcatttatgctataag 37063236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 25 - 183
Target Start/End: Original strand, 37526161 - 37526318
Alignment:
Q  25 ttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaa 124  Q
    |||||||  |||||| ||||| ||||| | ||||| ||||   ||| |||||| |||||| | ||| |||||||||||| || || | | ||||| ||||    
T  37526161 ttgtgagactgtttgagagagcttatgaatacaacctatgacatgttaataagctgttttcagcttatttccataagctctccagaacaacttatgaaaa 37526260  T
Q  125 cagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaata 183  Q
    || ||||||| ||||||||||||  ||||| || ||||||||| ||| |||||||||||    
T  37526261 caacttatagcttatatgaaaactttttgatttgattttatct-tttattatagaaata 37526318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 94 - 167
Target Start/End: Original strand, 38047886 - 38047959
Alignment:
Q  94 tccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 167  Q
    |||||||||| || || ||||||||| |||||||| |||||| ||||||||||   ||||||||||||||||||    
T  38047886 tccataagctctccaggatagcttatgaaaacagcatatagtatatatgaaaataatttgactttattttatct 38047959  T

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Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 114 - 199
Target Start/End: Original strand, 39257438 - 39257521
Alignment:
Q  114 gcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcac 199  Q
    |||||| |||||| ||||||||||||||||||| ||||||||||||||||| || ||| ||||||| ||||  |||| ||||||||    
T  39257438 gcttatgaaaacaacttatagtttatatgaaaa-ggtttgactttattttacct-tttgttatagagatagcatatacataagcac 39257521  T

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Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 139 - 199
Target Start/End: Original strand, 7096203 - 7096262
Alignment:
Q  139 tatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcac 199  Q
    |||||||| |||||||||||||||||||| ||| |||||||||||| ||||| ||||||||    
T  7096203 tatgaaaatggtttgactttattttatct-tttgttatagaaatagcttatacataagcac 7096262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 121 - 217
Target Start/End: Complemental strand, 19177491 - 19177396
Alignment:
Q  121 aaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaaacactta 217  Q
    |||||| ||||||| |||||||||||| ||| ||||| ||||||||| | | || ||||||||| ||||| |||||||| ||||||| || ||||||    
T  19177491 aaaacaacttatagcttatatgaaaacagttagacttaattttatct-tctgttgtagaaatagtttatacataagcacttatatgataatcactta 19177396  T

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Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 22 - 170
Target Start/End: Complemental strand, 30217192 - 30217045
Alignment:
Q  22 cacttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttatta 121  Q
    ||||||||||  |||||  ||||| ||||||||  | ||||||||| ||| |||||||||||||   || |||||||||||| || || ||||||||| |    
T  30217192 cacttgtgagactgtttaggagagcttatggaattatcttatgcat-gtccataagttgttttaggtttatttccataagctctccaggatagcttatga 30217094  T
Q  122 aaacagcttatagtttatatgaaaacggtttgactttattttatctctt 170  Q
    || |||||||||| |||  |||||    || ||||||||||||||||||    
T  30217093 aagcagcttatagattacgtgaaattaattagactttattttatctctt 30217045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 133
Target Start/End: Original strand, 1437611 - 1437697
Alignment:
Q  47 ttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttat-taaaacagcttata 133  Q
    ||||||||||||||||| ||| ||| |||||| ||||| ||||||||||||| ||||||| |  |||||||||  |||||||||||||    
T  1437611 ttatggaaacaacttatacat-gtccataagtcgttttgatcttgtttccatgagctttccatgatagcttatgaaaaacagcttata 1437697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 128 - 223
Target Start/End: Original strand, 35135727 - 35135821
Alignment:
Q  128 cttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaaacacttatcctat 223  Q
    ||||||| |||||||||||  ||||||||||||||||||| ||| |||||||||||  ||||| |||| ||| ||||||  || ||||||| ||||    
T  35135727 cttatagcttatatgaaaatagtttgactttattttatct-tttgttatagaaatatcttatacataaacacttatatgttaagcacttatgctat 35135821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 165
Target Start/End: Complemental strand, 14980517 - 14980471
Alignment:
Q  119 ttaaaacagcttatagtttatatgaaaacggtttgactttattttat 165  Q
    ||||||||| |||||||||| |||||||| |||||||||||||||||    
T  14980517 ttaaaacaggttatagtttagatgaaaacagtttgactttattttat 14980471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 111 - 218
Target Start/End: Original strand, 26209461 - 26209566
Alignment:
Q  111 atagcttattaaaacagcttatagtttata-tgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgaga 209  Q
    ||||||||| |||||||||||||| ||||| |||||||  || ||||||||||||||   || |||||||||||  ||||| ||||||| |||| ||| |    
T  26209461 atagcttatgaaaacagcttatagcttatattgaaaacaattggactttattttatc---ttgttatagaaataacttatacataagcaaatatgtgata 26209557  T
Q  210 aacacttat 218  Q
    | |||||||    
T  26209558 agcacttat 26209566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 112 - 181
Target Start/End: Original strand, 12595789 - 12595857
Alignment:
Q  112 tagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaa 181  Q
    |||||||| ||| ||||| |||||||||||||||||  ||| |||||||||||||| ||| |||||||||    
T  12595789 tagcttatgaaaccagctcatagtttatatgaaaacaatttaactttattttatct-tttgttatagaaa 12595857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 150 - 207
Target Start/End: Original strand, 35095870 - 35095926
Alignment:
Q  150 tttgactttattttatctcttttttatagaaatagattatatataagcacatatatga 207  Q
    |||||||||||||||||| ||| |||||||||||| ||| |||||||||| |||||||    
T  35095870 tttgactttattttatct-tttgttatagaaatagtttaaatataagcacttatatga 35095926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 154
Target Start/End: Original strand, 36542260 - 36542373
Alignment:
Q  41 gagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttata 140  Q
    |||| |||||||||||| ||||||   |||| | ||| |||||| | ||| |||||| ||||| ||||| |||||||||  || |||||||||| |||||    
T  36542260 gagattttatggaaacatcttatgacatgtccagaagctgtttttaacttatttccacaagctctctaggatagcttatggaatcagcttatagcttata 36542359  T
Q  141 tgaaaacggtttga 154  Q
    ||| ||| ||||||    
T  36542360 tgagaacagtttga 36542373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 126 - 199
Target Start/End: Original strand, 38829698 - 38829770
Alignment:
Q  126 agcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcac 199  Q
    |||||||||||||| |||||||  | |||||| ||||||||| ||| ||||| |||||| ||||||||||||||    
T  38829698 agcttatagtttatttgaaaaccatatgacttaattttatct-tttattataaaaataggttatatataagcac 38829770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 42 - 147
Target Start/End: Original strand, 41957430 - 41957535
Alignment:
Q  42 agagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatat 141  Q
    |||| ||| ||||||| ||||||   |||| |||||||||||| ||||| ||| |||||| | || || ||||||||| |||||||||||||  ||| ||    
T  41957430 agagcttacggaaacagcttatgacatgtccataagttgttttcatcttattttcataagttctcaaggatagcttatgaaaacagcttataacttacat 41957529  T
Q  142 gaaaac 147  Q
    ||||||    
T  41957530 gaaaac 41957535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 167
Target Start/End: Complemental strand, 36539764 - 36539712
Alignment:
Q  115 cttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 167  Q
    ||||| |||||| ||||||| |||||||||||| | |||||||||||||||||    
T  36539764 cttataaaaacaacttatagcttatatgaaaacaggttgactttattttatct 36539712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 167
Target Start/End: Original strand, 41277398 - 41277454
Alignment:
Q  111 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 167  Q
    ||||||||| |||||| ||| ||  |||||||||||| |||||||||||||||||||    
T  41277398 atagcttatgaaaacaacttttaacttatatgaaaacagtttgactttattttatct 41277454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 128 - 167
Target Start/End: Original strand, 583838 - 583877
Alignment:
Q  128 cttatagtttatatgaaaacggtttgactttattttatct 167  Q
    ||||||| |||||||||||| |||||||||||||||||||    
T  583838 cttatagcttatatgaaaacagtttgactttattttatct 583877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 70 - 189
Target Start/End: Original strand, 3970687 - 3970806
Alignment:
Q  70 tcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctct 169  Q
    |||||||| | |||| | ||| ||| |||||||| || || ||||||||| |||  ||||| ||| ||||| |||| | | ||||||||||||||||| |    
T  3970687 tcaataagctattttcagcttattttcataagctctccagtatagcttatgaaattagcttctagattataagaaagcagattgactttattttatcttt 3970786  T
Q  170 tttttatagaaatagattat 189  Q
     | |||||||||||| ||||    
T  3970787 gtgttatagaaatagtttat 3970806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 166
Target Start/End: Complemental strand, 6109596 - 6109452
Alignment:
Q  20 aacacttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttat 119  Q
    ||||||||||||  | |||  ||||| ||||||||| || |||||   |||| |||||||||||| | ||| |||||| ||||| || | ||||||| ||    
T  6109596 aacacttgtgagaatattttggagagcttatggaaaaaaattatgatatgtccataagttgttttcagcttatttccaaaagctctcgaacatagctaat 6109497  T
Q  120 taaaacagcttatagtttatatgaaaacggtttgactttattttatc 166  Q
     | || ||||||||| | ||||||||||  | |||||||||||||||    
T  6109496 gagaatagcttatagctaatatgaaaac--tgtgactttattttatc 6109452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 107 - 146
Target Start/End: Original strand, 8177581 - 8177620
Alignment:
Q  107 tagcatagcttattaaaacagcttatagtttatatgaaaa 146  Q
    ||||||||||||| ||||||| ||||||||||||||||||    
T  8177581 tagcatagcttatgaaaacagtttatagtttatatgaaaa 8177620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 167
Target Start/End: Original strand, 15003543 - 15003618
Alignment:
Q  92 tttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 167  Q
    |||||||||||| ||| | ||||||||| |||||  ||||||| ||||||||| |  |||||| ||||||||||||    
T  15003543 tttccataagctctcttggatagcttatgaaaaccacttatagcttatatgaagagagtttgattttattttatct 15003618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 207
Target Start/End: Original strand, 18704041 - 18704178
Alignment:
Q  68 tgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 167  Q
    |||| |||||||||||| | ||| |||||||||| | | |   ||||||||| |||||| ||||||| |||||| ||||  | ||||||||| |||||||    
T  18704041 tgtctataagttgttttcagcttatttccataagatctttgtaatagcttatgaaaacaacttatagcttatataaaaatagcttgacttta-tttatct 18704139  T
Q  168 cttttttatagaaatagattatatataagcacatatatga 207  Q
     ||| |||||||||||  ||||| ||||| || |||||||    
T  18704140 -tttgttatagaaataacttatacataagaacttatatga 18704178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 25 - 183
Target Start/End: Original strand, 37690598 - 37690756
Alignment:
Q  25 ttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagctt-attaaa 123  Q
    |||||||  |||||| ||||| ||||| | ||||| ||||   ||| |||||| |||||| | ||| |||||||||||| || |  ||| ||| || |||    
T  37690598 ttgtgagactgtttgagagagcttatgaatacaacctatgacatgttaataagctgttttcagcttatttccataagctctccataataactttatgaaa 37690697  T
Q  124 acagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaata 183  Q
    ||| ||||||| ||||||||||||  ||||| || ||||||||| ||| |||||||||||    
T  37690698 acaacttatagcttatatgaaaactttttgatttgattttatct-tttattatagaaata 37690756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 195
Target Start/End: Original strand, 38831486 - 38831587
Alignment:
Q  92 tttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatat 191  Q
    ||||||| |||| ||||  ||||||||  |||||| |||||  |||||| |||||| ||||||||||||||||||| ||| | | |||||||| ||||||    
T  38831486 tttccatcagctatctatgatagcttaa-aaaacaacttatcatttatacgaaaacagtttgactttattttatct-tttataacagaaatagcttatat 38831583  T
Q  192 ataa 195  Q
    ||||    
T  38831584 ataa 38831587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 218
Target Start/End: Original strand, 19113146 - 19113271
Alignment:
Q  92 tttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatat 191  Q
    ||||||| | || ||||| ||| || ||| ||||| ||||||||||||| |||||   || ||| ||||||||| | ||| ||||| |||||| |||||     
T  19113146 tttccattacctctctagaataactcattgaaacaacttatagtttataagaaaaaaattcgacattattttat-tttttgttataaaaatagtttatac 19113244  T
Q  192 ataagcacatatatgagaaacacttat 218  Q
    |||||||  ||||||| ||||||||||    
T  19113245 ataagcaattatatgataaacacttat 19113271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 170
Target Start/End: Complemental strand, 19369330 - 19369276
Alignment:
Q  116 ttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctctt 170  Q
    |||| ||| ||||||||||||||||||||||| ||| ||  ||||||||||||||    
T  19369330 ttatgaaaccagcttatagtttatatgaaaacagttcgagcttattttatctctt 19369276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 167
Target Start/End: Original strand, 26390760 - 26390893
Alignment:
Q  34 tgtttgtgagagtttatggaaacaacttatg-cattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttat 132  Q
    |||||| ||||| | || ||||||||||||  ||| ||| ||||| |||||| | ||| |||||||||||| || || ||| ||||  ||| || |||||    
T  26390760 tgtttgagagagctgatagaaacaacttatctcatagtccataagctgttttcaccttatttccataagctctccaggataacttaggaaaccatcttat 26390859  T
Q  133 agtttatatgaaaacggtttgactttattttatct 167  Q
    || |||||||||||| |||| || |||||||||||    
T  26390860 agcttatatgaaaacagtttaac-ttattttatct 26390893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 199
Target Start/End: Original strand, 15074754 - 15074883
Alignment:
Q  68 tgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 167  Q
    |||| ||||| |||||| | ||| ||||||||||||||| || ||| ||||| |||||| ||||||| |   |||||||| |||||| | |||| |||||    
T  15074754 tgtccataagctgttttcagcttatttccataagctttccagtataacttatgaaaacaacttatagct--catgaaaacagtttgattatattctatct 15074851  T
Q  168 cttttttatagaaatagatt-atatataagcac 199  Q
     ||| |||||||||||  || ||||||||||||    
T  15074852 -tttattatagaaataacttcatatataagcac 15074883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 119
Target Start/End: Complemental strand, 18700475 - 18700399
Alignment:
Q  42 agagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttat 119  Q
    |||| ||||||||||||||||||   |||| |||||||||||| | ||| | ||||||||||||| || |||||||||    
T  18700475 agagcttatggaaacaacttatgacatgtctataagttgttttcagctt-tatccataagctttcaaggatagcttat 18700399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 166
Target Start/End: Original strand, 18857450 - 18857503
Alignment:
Q  113 agcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatc 166  Q
    ||||||| |||||||||||||| |||||  |||||  |||||||||||||||||    
T  18857450 agcttatgaaaacagcttatagattatagaaaaacaatttgactttattttatc 18857503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 167
Target Start/End: Original strand, 37198111 - 37198184
Alignment:
Q  94 tccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 167  Q
    |||||||||| |||||||||||| || ||||||  |||||  ||| |||||| | |||||| ||||||||||||    
T  37198111 tccataagctatctagcatagctaatgaaaacaatttataacttaaatgaaatcagtttgattttattttatct 37198184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 147
Target Start/End: Original strand, 2569679 - 2569779
Alignment:
Q  47 ttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaa 146  Q
    ||||||||| | ||||||   |||| ||||| ||||||||  || | | |||||||||| ||  |||| |||| |||||||||||||| |||||||||||    
T  2569679 ttatggaaatagcttatgacatgtccataagctgttttaagtttatattcataagctttttatgatagtttatgaaaacagcttatagattatatgaaaa 2569778  T
Q  147 c 147  Q
    |    
T  2569779 c 2569779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 115 - 195
Target Start/End: Complemental strand, 8481236 - 8481157
Alignment:
Q  115 cttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataa 195  Q
    ||||| ||||||||||||||| ||||| |||   |||| |||||||||||||| ||| ||||| ||||| |||||| ||||    
T  8481236 cttatgaaaacagcttatagtgtatataaaatttgtttaactttattttatct-tttattatataaataaattatacataa 8481157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 167
Target Start/End: Original strand, 10272415 - 10272535
Alignment:
Q  47 ttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaa 146  Q
    |||| |||||||||||||   ||||  ||||||||||| | ||| ||| ||||| || || |  || |||||| |||||| ||||||| ||||| |||||    
T  10272415 ttatagaaacaacttatgacatgtctgtaagttgttttcagcttattttcataaactctccaagatggcttatgaaaacaacttatagcttatacgaaaa 10272514  T
Q  147 cggtttgactttattttatct 167  Q
    |  |||||||| |||||||||    
T  10272515 caatttgacttaattttatct 10272535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 115 - 199
Target Start/End: Original strand, 12595503 - 12595586
Alignment:
Q  115 cttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcac 199  Q
    ||||| ||| ||||||||| |||||| ||||||  ||||| |||||||||||| |||  ||||||||||| ||||| | ||||||    
T  12595503 cttataaaatcagcttataatttatacgaaaactatttgaatttattttatct-tttgctatagaaatagcttatacacaagcac 12595586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 184
Target Start/End: Original strand, 14599353 - 14599425
Alignment:
Q  113 agcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctctttt-ttatagaaatag 184  Q
    |||||||  ||||| ||||||  |||||||||||| ||||||||| ||||||||  |||| ||||||||||||    
T  14599353 agcttatcgaaacaacttataacttatatgaaaacagtttgacttaattttatcagttttgttatagaaatag 14599425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 167
Target Start/End: Complemental strand, 26516422 - 26516366
Alignment:
Q  111 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 167  Q
    ||||||||| ||||||| |||||  ||||||||||   |||||||||||||||||||    
T  26516422 atagcttatgaaaacagtttataacttatatgaaagtagtttgactttattttatct 26516366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 183
Target Start/End: Original strand, 29116998 - 29117049
Alignment:
Q  131 atagtttatatgaaaacggtttgactttattttatctcttttttatagaaata 183  Q
    |||| ||||| |||||| ||||||||||||||||||| ||| |||||||||||    
T  29116998 atagcttatacgaaaacagtttgactttattttatct-tttgttatagaaata 29117049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 207
Target Start/End: Complemental strand, 31694528 - 31694445
Alignment:
Q  123 aacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatga 207  Q
    |||| |||||||||| ||| ||||| ||||||||||| ||||| | ||| ||||||| |||| ||||  |||||||| |||||||    
T  31694528 aacaacttatagtttgtataaaaacagtttgactttagtttatgt-tttgttatagacatagcttattcataagcacttatatga 31694445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 167
Target Start/End: Complemental strand, 35550970 - 35550915
Alignment:
Q  111 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 167  Q
    |||| |||| ||||||||||||||||||||||||||    |||||||||||||||||    
T  35550970 ataggttataaaaacagcttatagtttatatgaaaa-taattgactttattttatct 35550915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 115 - 163
Target Start/End: Complemental strand, 41017745 - 41017697
Alignment:
Q  115 cttattaaaacagcttatagtttatatgaaaacggtttgactttatttt 163  Q
    ||||| |||||| ||||||| ||||| ||||| ||||||||||||||||    
T  41017745 cttatgaaaacaacttatagcttataggaaaatggtttgactttatttt 41017697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 5e-22; HSPs: 55)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 47 - 228
Target Start/End: Complemental strand, 4558884 - 4558704
Alignment:
Q  47 ttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaa 146  Q
    ||||||||| ||||||||   |||| |||||||||||| |  || |||||||||||| ||||| |||||||||  |||||||||||||  ||||||||||    
T  4558884 ttatggaaataacttatgatgtgtctataagttgtttttagtttatttccataagctctctaggatagcttatggaaacagcttatagcatatatgaaaa 4558785  T
Q  147 cggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaaacacttatcctataagcg 228  Q
       ||| |||||||||||||| ||| |||||||||||| ||||| |||| ||| || || | ||||  |||| |||||||||    
T  4558784 taatttaactttattttatct-tttattatagaaatagcttatacataaacacttacataataaacgtttatgctataagcg 4558704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 68 - 225
Target Start/End: Original strand, 28769344 - 28769500
Alignment:
Q  68 tgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 167  Q
    |||| |||||||||||| | ||| ||||||||| || || |  ||||||||| |||||||||||||| ||||| |||||  ||||||||| |||||||      
T  28769344 tgtccataagttgttttcagcttatttccataaactctccaaaatagcttatgaaaacagcttatagcttataagaaaatagtttgacttaattttat-a 28769442  T
Q  168 cttttttatagaaatagattatatataagcacatatatgagaaacacttatcctataa 225  Q
     ||| |||||| ||||| ||||| |||||||  ||||||| || ||||||| ||||||    
T  28769443 gtttgttataggaatagcttatacataagcatttatatgataagcacttatgctataa 28769500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 68 - 196
Target Start/End: Complemental strand, 12361257 - 12361130
Alignment:
Q  68 tgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 167  Q
    |||| ||||| |||||| | ||| ||||||| |||| ||  | ||| ||||| |||||||||||||| ||||||||||||  |||||||| |||||||||    
T  12361257 tgtccataagctgttttcaacttatttccattagctctcctgaataacttatgaaaacagcttatagcttatatgaaaacaatttgacttcattttatct 12361158  T
Q  168 cttttttatagaaatagattatatataag 196  Q
     || ||||||||||||  |||||||||||    
T  12361157 -ttatttatagaaataacttatatataag 12361130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 105 - 184
Target Start/End: Original strand, 27728063 - 27728141
Alignment:
Q  105 tctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatag 184  Q
    ||||| ||||||||| |||||| || ||| ||||||||||||  ||||||||||||||||||| ||||||||||||||||    
T  27728063 tctaggatagcttatgaaaacaactaatactttatatgaaaatagtttgactttattttatct-ttttttatagaaatag 27728141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 111 - 194
Target Start/End: Original strand, 33209268 - 33209350
Alignment:
Q  111 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatata 194  Q
    ||||||||| |||| |||||||||||||||||||||| ||| ||||||||||||||| ||  |||||||||||| |||| ||||    
T  33209268 atagcttataaaaatagcttatagtttatatgaaaacagttcgactttattttatct-ttcattatagaaatagcttatttata 33209350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 111 - 207
Target Start/End: Original strand, 35298525 - 35298621
Alignment:
Q  111 atagcttattaaaacagcttatagtttata-tgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatga 207  Q
    ||||||||| |||||| ||||||||||||| ||||||| ||||| ||||||||||||| ||| |||  ||||||| ||||| |||||||| |||||||    
T  35298525 atagcttatgaaaacaacttatagtttatattgaaaactgtttggctttattttatct-tttgttactgaaatagcttatacataagcacttatatga 35298621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 34 - 214
Target Start/End: Original strand, 39551180 - 39551359
Alignment:
Q  34 tgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttata 133  Q
    |||||| |||| |||||||||||||||||||   |||| | ||| |||||| | ||| |||  ||||||| || || | ||||||| |||||| ||||||    
T  39551180 tgtttgggagaatttatggaaacaacttatgacatgtccaaaagctgtttttaacttatttttataagctctccaggaaagcttatgaaaacaacttata 39551279  T
Q  134 gtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaaacac 214  Q
    | || |||||| || ||||  ||||||||||||| ||| |||| ||| ||| ||||| |||| ||| ||||||| ||||||    
T  39551280 gcttgtatgaagacagtttagctttattttatct-tttattatggaagtaggttatacataaacacttatatgataaacac 39551359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 92 - 199
Target Start/End: Complemental strand, 29973122 - 29973016
Alignment:
Q  92 tttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatat 191  Q
    ||||||||| || || || ||||||||| |||||| ||||||| |||| ||||||  |||||||||||||||| || | | ||| |||||||| ||||||    
T  29973122 tttccataaactctcaaggatagcttatgaaaacaacttatagcttatgtgaaaatagtttgactttattttacct-tgtgttaaagaaatagcttatat 29973024  T
Q  192 ataagcac 199  Q
    ||||||||    
T  29973023 ataagcac 29973016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 133 - 207
Target Start/End: Original strand, 35534931 - 35535004
Alignment:
Q  133 agtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatga 207  Q
    ||||||||  ||||| |||||||||||||||| || ||| |||||||||||| |||||||||||||| |||||||    
T  35534931 agtttatacaaaaacagtttgactttattttaact-tttattatagaaatagcttatatataagcacttatatga 35535004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 94 - 167
Target Start/End: Complemental strand, 4763957 - 4763884
Alignment:
Q  94 tccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 167  Q
    |||||||||| |  || ||||||||  |||||||||||||| |||| |||||||||||||| ||||||||||||    
T  4763957 tccataagctcttcaggatagcttagaaaaacagcttatagcttatgtgaaaacggtttgaatttattttatct 4763884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 96 - 225
Target Start/End: Complemental strand, 10727233 - 10727106
Alignment:
Q  96 cataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataa 195  Q
    |||||||||| ||| ||||||||| |||||| ||||||  |||| |||||||  ||||| ||||||| |||| |||  ||||||||||| ||||  ||||    
T  10727233 cataagctttttagaatagcttat-aaaacaacttataacttatgtgaaaacactttgaatttatttcatct-tttgctatagaaatagcttatgcataa 10727136  T
Q  196 gcacatatatgagaaacacttatcctataa 225  Q
    |||| |||||||  ||||||||| ||||||    
T  10727135 gcacttatatgatgaacacttatgctataa 10727106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 166
Target Start/End: Original strand, 30191112 - 30191244
Alignment:
Q  34 tgtttgtgagagtttatggaaacaacttatg-cattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttat 132  Q
    |||||| ||||| |||||||||||||||||| |||  |||| || ||||||| | ||| ||||||||| | ||  || ||||||||| |||| |||||||    
T  30191112 tgtttgggagagcttatggaaacaacttatgacatgttcaa-aacttgttttcagcttatttccataaacatttcaggatagcttatcaaaatagcttat 30191210  T
Q  133 agtttatatgaaaacggtttgactttattttatc 166  Q
    || |||||||  | | ||||||||||||||||||    
T  30191211 agattatatgtgagcagtttgactttattttatc 30191244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 74 - 190
Target Start/End: Original strand, 1470867 - 1470982
Alignment:
Q  74 taagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttt 173  Q
    ||||||||||| ||||| ||| | ||| ||||  |  |||| |||| |||||||||||||| ||||||||||    |||||||||||||||||| ||| |    
T  1470867 taagttgttttcatcttattttcctaaacttttcatgataggttatgaaaacagcttatagcttatatgaaagtaatttgactttattttatct-tttat 1470965  T
Q  174 tatagaaatagattata 190  Q
    ||||||||||| |||||    
T  1470966 tatagaaatagcttata 1470982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 111 - 207
Target Start/End: Complemental strand, 8799427 - 8799332
Alignment:
Q  111 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatga 207  Q
    ||||||||| |||||| |||||| ||||| || |||  ||||||||||||||||||| ||| |||||||||||   || ||| ||||||||||||||    
T  8799427 atagcttataaaaacaccttataatttatctggaaatagtttgactttattttatct-tttgttatagaaataacatacatacaagcacatatatga 8799332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 150 - 226
Target Start/End: Complemental strand, 14482185 - 14482110
Alignment:
Q  150 tttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaaacacttatcctataag 226  Q
    |||||||||||||||||| ||| |||||||||||| ||||| |||||||| ||||||| || |||| || |||||||    
T  14482185 tttgactttattttatct-tttgttatagaaatagtttatacataagcacttatatgataagcactaatgctataag 14482110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 167
Target Start/End: Original strand, 6509332 - 6509407
Alignment:
Q  92 tttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 167  Q
    |||| ||||||| || || ||||||||| |||||||||||||| |||||| || ||  ||||||||||||||||||    
T  6509332 tttcaataagctctccaggatagcttatgaaaacagcttatagcttatataaatacaatttgactttattttatct 6509407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 167
Target Start/End: Complemental strand, 6950435 - 6950288
Alignment:
Q  20 aacacttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttat 119  Q
    |||| ||||||| ||||||| ||||| ||||| ||||||| ||||   |||| |||||||||||| | ||| |||||||||||| | ||| ||| ||| |    
T  6950435 aacatttgtgagattgtttgggagagcttatgtaaacaacctatgacatgtcgataagttgttttcagcttatttccataagctctttaggataactttt 6950336  T
Q  120 --taaaacagcttatagtttatatgaaaacggtttgactttattttatct 167  Q
      ||||  ||||||||  |||||||||||| ||||| ||||| |||||||    
T  6950335 tataaattagcttata--ttatatgaaaacagtttgtctttactttatct 6950288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 53 - 184
Target Start/End: Complemental strand, 11183625 - 11183495
Alignment:
Q  53 aaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggttt 152  Q
    ||||||||||||   |||| ||||| |||||| | ||| |||||||||||| || ||  |||||| | |||||||||||||| | ||||||  || ||||    
T  11183625 aaacaacttatgatatgtctataagctgttttcagcttatttccataagctctccagggtagcttgtgaaaacagcttatagctaatatgaggacagttt 11183526  T
Q  153 gactttattttatctcttttttatagaaatag 184  Q
    |||||| |||||||| || ||| |||||||||    
T  11183525 gactttgttttatctgttgttt-tagaaatag 11183495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 131 - 225
Target Start/End: Original strand, 3645884 - 3645977
Alignment:
Q  131 atagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaaacacttatcctataa 225  Q
    |||| |||||||||||  |||||| ||| |||||| | ||| |||||||||||| ||||| | |||||| ||||||| |||||||||| ||||||    
T  3645884 atagcttatatgaaaatagtttgattttgttttatat-tttcttatagaaatagcttatacacaagcacttatatgataaacacttatgctataa 3645977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 199
Target Start/End: Original strand, 10076335 - 10076410
Alignment:
Q  122 aaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcac 199  Q
    |||||||||||| |||||||||||||  ||||||||  || ||| | ||| |||||||||||||||||| ||||||||    
T  10076335 aaacagcttataatttatatgaaaacaatttgactt--ttatatttttttattatagaaatagattatacataagcac 10076410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 105 - 167
Target Start/End: Complemental strand, 34770920 - 34770858
Alignment:
Q  105 tctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 167  Q
    ||||| ||||||||| |||||| ||||||| ||| ||||||||  ||||||||||||||||||    
T  34770920 tctaggatagcttatgaaaacaacttatagcttaaatgaaaacaatttgactttattttatct 34770858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 158
Target Start/End: Original strand, 43704392 - 43704473
Alignment:
Q  79 tgttttaatcttgtttccataagctttctagcata--gcttattaaaacagcttatagtttatatgaaaacggtttgacttt 158  Q
    |||||||| ||| ||||||||||||||  || |||   ||||| |||||| |||||||||||||||||||| ||||||||||    
T  43704392 tgttttaagcttatttccataagcttttgaggataactcttatgaaaacaacttatagtttatatgaaaacagtttgacttt 43704473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 139 - 228
Target Start/End: Complemental strand, 34563244 - 34563156
Alignment:
Q  139 tatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaaacacttatcctataagcg 228  Q
    ||||||||  |||||||||||||||||| |||| | |||||||||  |||||||||||||| ||||||| |||   |||| |||||||||    
T  34563244 tatgaaaattgtttgactttattttatc-ctttgtcatagaaataacttatatataagcacttatatgataaatgtttatgctataagcg 34563156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 111 - 228
Target Start/End: Complemental strand, 35869859 - 35869743
Alignment:
Q  111 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaa 210  Q
    ||||||||| |||||| ||||||| |||||||||||  |||||| |||||||||| | ||| || ||||||| | ||||| ||||| || ||||||| ||    
T  35869859 atagcttatgaaaacaacttatagcttatatgaaaattgtttgaatttattttatat-tttgttgtagaaatcgcttatacataagaacttatatgataa 35869761  T
Q  211 acacttatcctataagcg 228  Q
       ||||| |||||||||    
T  35869760 gtgcttatgctataagcg 35869743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 196
Target Start/End: Complemental strand, 3936870 - 3936787
Alignment:
Q  112 tagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataag 196  Q
    |||||||  |||||||||||||| ||||| ||| ||  |||  |||||||||||| |||| |||||||||||||||||| |||||    
T  3936870 tagcttacgaaaacagcttatagcttataggaagacaatttagctttattttatc-ctttgttatagaaatagattatacataag 3936787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 133
Target Start/End: Original strand, 10079080 - 10079140
Alignment:
Q  73 ataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttata 133  Q
    |||||||||||||| ||| ||||||||| ||||| || |||||| || |||||||||||||    
T  10079080 ataagttgttttaagcttctttccataaactttccagaatagctcatgaaaacagcttata 10079140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 217
Target Start/End: Complemental strand, 13652327 - 13652132
Alignment:
Q  22 cacttgtgagcttgtttgtgagagtttatggaaacaacttatg-cattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttatt 120  Q
    |||||||||| |||||||  |||| ||||||| |||| ||||  || || | ||||| ||||||   ||| ||||| |||||| || || |||||||||     
T  13652327 cacttgtgaggttgtttggaagagcttatggacacaaattataacaatgactataagctgttttctacttatttccttaagctctccagaatagcttata 13652228  T
Q  121 aaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaaacactta 217  Q
    ||||||  |||||  ||||||||||||  ||| |||| |||  |||| |||  ||||||||||| ||||| |||||||| || |||| |||||||||    
T  13652227 aaaacaatttataacttatatgaaaacaatttcacttcattccatct-tttgctatagaaatagcttatacataagcacttagatgataaacactta 13652132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 217
Target Start/End: Complemental strand, 13710970 - 13710775
Alignment:
Q  22 cacttgtgagcttgtttgtgagagtttatggaaacaacttatg-cattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttatt 120  Q
    |||||||||| |||||||  |||| ||||||| |||| ||||  || || | ||||| ||||||   ||| ||||| |||||| || || |||||||||     
T  13710970 cacttgtgaggttgtttggaagagcttatggacacaaattataacaatgactataagctgttttctacttatttccttaagctctccagaatagcttata 13710871  T
Q  121 aaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaaacactta 217  Q
    ||||||  |||||  ||||||||||||  ||| |||| |||  |||| |||  ||||||||||| ||||| |||||||| || |||| |||||||||    
T  13710870 aaaacaatttataacttatatgaaaacaatttcacttcattccatct-tttgctatagaaatagcttatacataagcacttagatgataaacactta 13710775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 133
Target Start/End: Original strand, 30277255 - 30277315
Alignment:
Q  73 ataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttata 133  Q
    |||||||||||| | ||| ||||||||| || ||||| ||||||||| |||||||||||||    
T  30277255 ataagttgttttcagcttatttccataaactctctaggatagcttatgaaaacagcttata 30277315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 225
Target Start/End: Original strand, 39392747 - 39392822
Alignment:
Q  149 gtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaaacacttatcctataa 225  Q
    ||||||||||||||||||| ||| |||||||||||| ||||| |||  ||| ||||||| || ||||||| ||||||    
T  39392747 gtttgactttattttatct-tttgttatagaaatagtttatacatagccacttatatgataagcacttatgctataa 39392822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 217
Target Start/End: Original strand, 41620245 - 41620444
Alignment:
Q  17 atgaacacttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagct 116  Q
    |||||||| ||||||  |||| | || ||||||||||||||| |||||   |||| ||||||||||||   ||| ||| || |||||    |  ||||||    
T  41620245 atgaacacctgtgaggctgttagggaaagtttatggaaacaaattatgacatgtccataagttgttttccgcttattttcaaaagctcgacaagatagct 41620344  T
Q  117 tattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaaacactt 216  Q
    ||| |||||||||| |||  |||||||| |   |||||||||||||||||| ||| ||| | |||||  |||||||||||||| | ||||| || |||||    
T  41620345 tataaaaacagcttttagaatatatgaacataatttgactttattttatct-tttgttacaaaaataacttatatataagcacttgtatgataaccactt 41620443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 146
Target Start/End: Original strand, 44865587 - 44865647
Alignment:
Q  86 atcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaa 146  Q
    ||||| ||||||||| || ||||| ||||||||| ||| |||||||||| |||||||||||    
T  44865587 atcttatttccataaactctctagtatagcttataaaaccagcttatagcttatatgaaaa 44865647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 34 - 133
Target Start/End: Complemental strand, 8060768 - 8060669
Alignment:
Q  34 tgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttata 133  Q
    |||||| ||||| ||||| |||||| ||||| |  ||  ||||||| |||| | ||| |||||||||||| ||||| || |||||| |||||||||||||    
T  8060768 tgtttgagagagcttatgaaaacaaattatggaaagttcataagttattttcagcttatttccataagctctctaggattgcttatgaaaacagcttata 8060669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 195
Target Start/End: Complemental strand, 9700066 - 9699940
Alignment:
Q  68 tgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 167  Q
    |||| ||||| |||||| | ||| ||| |||||||| ||| | ||| | ||| ||||||||||||| ||||| |||||||  |||||| |||||||| ||    
T  9700066 tgtccataagctgttttcaccttattttcataagctctcttgaataacatatgaaaacagcttataatttatttgaaaacaatttgaccttattttaact 9699967  T
Q  168 cttttttatagaaatagattatatataa 195  Q
     ||| |||| ||||||| ||||| ||||    
T  9699966 -tttgttatcgaaatagcttatacataa 9699940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 79 - 198
Target Start/End: Complemental strand, 11795146 - 11795028
Alignment:
Q  79 tgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatag 178  Q
    |||||| | ||| |||||||||||| || |  ||||||||| ||| |||||||||  |||||||||||| || |||||||||| ||| | ||| | ||||    
T  11795146 tgttttcagcttatttccataagctctccataatagcttatgaaatcagcttataacttatatgaaaacagtgtgactttattgtatgt-tttgtcatag 11795048  T
Q  179 aaatagattatatataagca 198  Q
    ||| || ||||| |||||||    
T  11795047 aaaaagcttatacataagca 11795028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 116 - 183
Target Start/End: Complemental strand, 26820216 - 26820150
Alignment:
Q  116 ttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaata 183  Q
    |||| ||||| ||||||||||||||  ||||  ||||||||||||||||||| ||| |||||||||||    
T  26820216 ttatgaaaacggcttatagtttataacaaaatagtttgactttattttatct-tttgttatagaaata 26820150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 111 - 162
Target Start/End: Complemental strand, 30013240 - 30013189
Alignment:
Q  111 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattt 162  Q
    ||||||||| |||||||||||||| ||||||| |||| ||||||||| ||||    
T  30013240 atagcttatgaaaacagcttatagcttatatggaaacagtttgacttaattt 30013189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 73 - 168
Target Start/End: Original strand, 42215316 - 42215411
Alignment:
Q  73 ataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctc 168  Q
    ||||| |||||| | ||| ||| |||||||| || || ||||| ||| |||| || |||||| |||||  ||||| ||||||||||||||||||||    
T  42215316 ataagctgttttcagcttatttacataagctctccaggatagcatatgaaaataggttatagattatacaaaaacagtttgactttattttatctc 42215411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 162
Target Start/End: Original strand, 26284800 - 26284894
Alignment:
Q  68 tgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattt 162  Q
    |||| |||||||||||| | ||| ||| |||||||| |  || ||| ||||  |||||| ||| || ||||||||||||| ||||||||||||||    
T  26284800 tgtctataagttgttttcagcttattttcataagctatacaggataacttacgaaaacaacttgtactttatatgaaaacagtttgactttattt 26284894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 227
Target Start/End: Complemental strand, 29699266 - 29699161
Alignment:
Q  121 aaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaaacacttatcc 220  Q
    |||||||||||||  ||| |||| |||  |||||||||||||||||| ||| |||||||||||  || || |||||||  ||||||| ||| | |||| |    
T  29699266 aaaacagcttataacttagatgacaacattttgactttattttatct-tttgttatagaaataacttgtacataagcatttatatgataaatatttatgc 29699168  T
Q  221 tataagc 227  Q
    |||||||    
T  29699167 tataagc 29699161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 167
Target Start/End: Complemental strand, 31862553 - 31862459
Alignment:
Q  73 ataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 167  Q
    ||||| |||||| | ||| ||| |||||||| ||||| ||| ||||| |||||| ||||||| ||||| || ||  |||||||||||| ||||||    
T  31862553 ataagctgttttcagcttattttcataagctctctaggataacttatgaaaacatcttatagcttatacgagaatagtttgactttatattatct 31862459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 225
Target Start/End: Original strand, 35453671 - 35453784
Alignment:
Q  111 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaa 210  Q
    ||||||||  |||||| | ||||  ||||||||||   |||| |||||||||||||| ||| || |||||| |||||||||||||| || ||||||| ||    
T  35453671 atagcttaaaaaaacaacctataacttatatgaaactagtttaactttattttatct-tttgttgtagaaacagattatatataagtacttatatgacaa 35453769  T
Q  211 acacttatcctataa 225  Q
     | ||||| ||||||    
T  35453770 gcgcttatgctataa 35453784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 64
Target Start/End: Original strand, 40280185 - 40280227
Alignment:
Q  22 cacttgtgagcttgtttgtgagagtttatggaaacaacttatg 64  Q
    ||||| |||| ||||||| ||||||||||||||||||||||||    
T  40280185 cacttatgagattgtttgagagagtttatggaaacaacttatg 40280227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 196
Target Start/End: Complemental strand, 42597420 - 42597339
Alignment:
Q  114 gcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataag 196  Q
    |||||| |||||| ||||||| ||  ||||||||  ||| |||||||||||||| ||| |||||||||||| ||||| |||||    
T  42597420 gcttatgaaaacaacttatagcttgcatgaaaacaattttactttattttatct-tttgttatagaaatagcttatacataag 42597339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 205
Target Start/End: Original strand, 6918236 - 6918320
Alignment:
Q  120 taaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatat 205  Q
    |||| ||| |||||| ||||  |||||| ||||||||||||||||||| ||| ||||| |||||| ||||||| || ||| |||||    
T  6918236 taaagcagtttatagcttattagaaaacagtttgactttattttatct-tttattatataaatagcttatatacaaacacttatat 6918320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 218
Target Start/End: Complemental strand, 8629070 - 8629025
Alignment:
Q  173 ttatagaaatagattatatataagcacatatatgagaaacacttat 218  Q
    |||||||||||| ||||| |||||||| ||||||| ||||||||||    
T  8629070 ttatagaaatagcttataaataagcacttatatgataaacacttat 8629025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 167
Target Start/End: Original strand, 31885094 - 31885162
Alignment:
Q  98 taagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 167  Q
    |||||| ||||| ||||||||  ||||||| |||||| |||||  |||||||||||||||| ||||||||    
T  31885094 taagctctctaggatagcttac-aaaacagtttatagcttatacaaaaacggtttgactttcttttatct 31885162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 184
Target Start/End: Original strand, 39561557 - 39561661
Alignment:
Q  79 tgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatag 178  Q
    |||||| | ||| ||||||||||||||  |  ||||||||  |||||| ||||||||||| ||||||||   | |||||||||||||  |||| ||||||    
T  39561557 tgttttcagcttatttccataagcttttcatgatagcttacgaaaacaacttatagtttagatgaaaacaaatcgactttattttat-actttgttatag 39561655  T
Q  179 aaatag 184  Q
    ||||||    
T  39561656 aaatag 39561661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 207
Target Start/End: Complemental strand, 40356854 - 40356798
Alignment:
Q  150 tttgactttattttatctcttttttatagaaatagattatatataagcacatatatga 207  Q
    |||||||||||||||||| ||| ||||| |||||| ||||| |||||||| |||||||    
T  40356854 tttgactttattttatct-tttattatataaatagcttatagataagcacttatatga 40356798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 115 - 167
Target Start/End: Original strand, 787158 - 787210
Alignment:
Q  115 cttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 167  Q
    ||||| ||||||| |||||| |||||||| |||  ||||||||||||||||||    
T  787158 cttatgaaaacagtttatagcttatatgataacaatttgactttattttatct 787210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 140
Target Start/End: Complemental strand, 8062394 - 8062322
Alignment:
Q  68 tgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttata 140  Q
    |||| ||||| |||||| | ||| ||||||||| || ||||  ||||||||| |||||||||||||| |||||    
T  8062394 tgtccataagatgttttcagcttatttccataatctctctaagatagcttatgaaaacagcttatagcttata 8062322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 115 - 183
Target Start/End: Original strand, 30040598 - 30040664
Alignment:
Q  115 cttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaata 183  Q
    ||||| |||||| ||||||||||||| |||||| | ||||||||||| ||| ||||| |||||||||||    
T  30040598 cttatgaaaacaacttatagtttata-gaaaacagattgactttattctat-tctttgttatagaaata 30040664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 145
Target Start/End: Complemental strand, 31705145 - 31705073
Alignment:
Q  73 ataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaa 145  Q
    ||||| |||||| | ||| ||||||||| || || || | ||||||| |||||||||||||| ||||||||||    
T  31705145 ataagctgttttcagcttatttccataaactctcaaggacagcttatgaaaacagcttatagcttatatgaaa 31705073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 100
Target Start/End: Complemental strand, 39049385 - 39049305
Alignment:
Q  20 aacacttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataa 100  Q
    |||| ||||||| |||||||||| || ||||| |||||||||||    |||||||||| |||||| | ||||||| |||||    
T  39049385 aacatttgtgagattgtttgtgaaagcttatgaaaacaacttataacatgtcaataagctgttttcaacttgtttgcataa 39049305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 167
Target Start/End: Original strand, 41336693 - 41336749
Alignment:
Q  111 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 167  Q
    ||||||||| ||||||  || ||||||||||||||||  ||||||| ||||||||||    
T  41336693 atagcttatgaaaacaagttctagtttatatgaaaacaatttgactatattttatct 41336749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 5e-19; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 96 - 207
Target Start/End: Complemental strand, 44319986 - 44319877
Alignment:
Q  96 cataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataa 195  Q
    |||||| | ||||| ||||||||| |||| ||||| ||| |||||||||||| ||| ||||||||||||  |||||||||||||||||| ||||| || |    
T  44319986 cataagttctctaggatagcttatcaaaatagcttgtagcttatatgaaaacagttcgactttatttta--tcttttttatagaaatagtttatacatga 44319889  T
Q  196 gcacatatatga 207  Q
    |||| |||||||    
T  44319888 gcacttatatga 44319877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 22 - 206
Target Start/End: Complemental strand, 4071989 - 4071811
Alignment:
Q  22 cacttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttatta 121  Q
    ||||||||||  |||||| ||||| ||||| ||||| ||||||  ||||   ||||||||||| | ||| | |||||||||| ||||   |||||||| |    
T  4071989 cacttgtgagactgtttgagagagcttatgaaaacagcttatgatttgttggtaagttgttttcagctt-tgtccataagctctcta---tagcttatca 4071894  T
Q  122 aaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatg 206  Q
     |||| ||||||| |||||||||||   |||||||||||||||||| ||| |||||||||||| |||||||||| ||| ||||||    
T  4071893 taacaacttatagcttatatgaaaataatttgactttattttatct-tttgttatagaaatag-ttatatataaacacttatatg 4071811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 46 - 184
Target Start/End: Complemental strand, 24929580 - 24929443
Alignment:
Q  46 tttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaa 145  Q
    |||||||||||| ||||||   |||  |||| ||||||| | ||| |||||||||||| ||||| | || |||| |||||| ||||||| || |||||||    
T  24929580 tttatggaaacagcttatggcatgttcataaattgttttcagcttatttccataagctctctagtagagtttatgaaaacaacttatagcttttatgaaa 24929481  T
Q  146 acggtttgactttattttatctcttttttatagaaatag 184  Q
    || ||| ||||||||||||||| ||| ||||||||||||    
T  24929480 acagttagactttattttatct-tttgttatagaaatag 24929443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 111 - 207
Target Start/End: Original strand, 54325085 - 54325180
Alignment:
Q  111 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatga 207  Q
    ||||||| | |||| ||||||||| |||||||||||| ||||||||||||||||||| ||| | |||||||||| ||||| | |||||| |||||||    
T  54325085 atagcttttgaaaatagcttatagcttatatgaaaacagtttgactttattttatct-tttgtaatagaaatagtttatacacaagcacttatatga 54325180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 121 - 207
Target Start/End: Original strand, 8422897 - 8422980
Alignment:
Q  121 aaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatga 207  Q
    |||||| ||||||| ||||||||||||  |  ||||||||||||||| ||||||||| |||||| ||||| ||||||||||||||||    
T  8422897 aaaacaacttatagcttatatgaaaacaat--gactttattttatct-ttttttataaaaatagcttatacataagcacatatatga 8422980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 121 - 199
Target Start/End: Original strand, 30338650 - 30338727
Alignment:
Q  121 aaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcac 199  Q
    ||||||| |||||| |||||||||||| |||| |||||||| ||||| ||| |||||||||||| ||||| ||||||||    
T  30338650 aaaacagtttatagcttatatgaaaacagtttaactttattctatct-tttgttatagaaatagtttatacataagcac 30338727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 133 - 207
Target Start/End: Complemental strand, 36734893 - 36734820
Alignment:
Q  133 agtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatga 207  Q
    ||||||||||||||  |||||||||||||||| || ||| ||||||||| |||||||| |||||||| |||||||    
T  36734893 agtttatatgaaaatagtttgactttattttacct-tttgttatagaaagagattatacataagcacttatatga 36734820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 216
Target Start/End: Complemental strand, 21157822 - 21157686
Alignment:
Q  79 tgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatag 178  Q
    |||||| | ||| |||||||||||| |  || ||||| ||| |||||| ||||||| ||| |||||||| ||||||||||| |||||  |||| ||||      
T  21157822 tgtttttagcttatttccataagctcttcaggatagcatatgaaaacatcttatagcttacatgaaaacagtttgactttagtttat-actttgttatca 21157724  T
Q  179 aaatagattatatataagcacatatatgagaaacactt 216  Q
    |||||| | ||| |||||||| ||||||| ||||||||    
T  21157723 aaatagctgatacataagcacttatatgataaacactt 21157686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 128 - 199
Target Start/End: Complemental strand, 11389531 - 11389461
Alignment:
Q  128 cttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcac 199  Q
    |||||||||||||| ||||| |||| |||||| ||||||| |||||||||||||||  ||||| ||||||||    
T  11389531 cttatagtttatattaaaacagtttaactttactttatct-ttttttatagaaataatttatacataagcac 11389461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 162
Target Start/End: Complemental strand, 24091549 - 24091434
Alignment:
Q  47 ttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaa 146  Q
    ||||||||||||||||||  |||   || ||||||||| |  |||||||||||| | ||| || ||| ||||| ||||||| |||||| |||||||||||    
T  24091549 ttatggaaacaacttatgatttgcacattagttgttttcagtttgtttccataaaccttccaggataacttatgaaaacagtttatagcttatatgaaaa 24091450  T
Q  147 cggtttgactttattt 162  Q
       |||||||||||||    
T  24091449 taatttgactttattt 24091434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 196
Target Start/End: Original strand, 45128280 - 45128442
Alignment:
Q  33 ttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttat 132  Q
    ||||||| ||||| |||||||||||||| ||    |||| || || |||||| | ||| |||||||||||||| ||| | || |||| ||||||  ||||    
T  45128280 ttgtttgagagagcttatggaaacaactgatatcatgtccatgagctgttttcagcttatttccataagctttataggacagtttatgaaaacaatttat 45128379  T
Q  133 agtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataag 196  Q
    || |||||||| ||   ||||| || ||||||||| ||| |||||||||||| ||||| |||||    
T  45128380 agcttatatgagaataatttgatttgattttatct-tttgttatagaaatagtttatacataag 45128442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 114 - 181
Target Start/End: Complemental strand, 53626795 - 53626729
Alignment:
Q  114 gcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaa 181  Q
    |||||| |||||||||||||| ||||||||||||  ||||| |||||||||||| ||| |||||||||    
T  53626795 gcttatgaaaacagcttatagcttatatgaaaacattttgaatttattttatct-tttgttatagaaa 53626729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 111 - 218
Target Start/End: Original strand, 2980514 - 2980625
Alignment:
Q  111 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctc----ttttttatagaaatagattatatataagcacatatatg 206  Q
    ||||||||| | |||| ||||||  || ||||||||  ||||||||||||||| | ||    ||| |||||||||||| ||||| |||||||| ||||||    
T  2980514 atagcttatgagaacaacttataacttgtatgaaaatagtttgactttattttgtttcattttttgttatagaaatagcttatacataagcacttatatg 2980613  T
Q  207 agaaacacttat 218  Q
    | ||||||||||    
T  2980614 ataaacacttat 2980625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 212
Target Start/End: Complemental strand, 4191734 - 4191661
Alignment:
Q  139 tatgaaaacggtttgactttattttatctctttt-ttatagaaatagattatatataagcacatatatgagaaac 212  Q
    ||||||||| ||||||||||||||| | |||||| |||||||||||| ||||| |||||||| ||||||| ||||    
T  4191734 tatgaaaacagtttgactttatttt-tatcttttgttatagaaatagcttatacataagcacttatatgataaac 4191661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 73 - 167
Target Start/End: Original strand, 7694020 - 7694114
Alignment:
Q  73 ataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 167  Q
    |||||||||||| | ||| ||||||||| || || || ||| ||||| |||||||||||||| |||||  ||||| ||||||||| |||| ||||    
T  7694020 ataagttgttttcagcttatttccataaactctccaggataacttatgaaaacagcttatagcttatacaaaaacagtttgacttcatttcatct 7694114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 176
Target Start/End: Original strand, 30581700 - 30581790
Alignment:
Q  86 atcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttat 176  Q
    ||||| ||||||||| || || |  ||| |||||||||||||||||||| ||||| |||||  ||||||||| ||||||||| || |||||    
T  30581700 atcttatttccataaactctccaagataacttattaaaacagcttatagcttatacgaaaatagtttgacttcattttatcttttatttat 30581790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 204
Target Start/End: Original strand, 32066453 - 32066549
Alignment:
Q  106 ctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatata 204  Q
    |||| ||||||||| |||||||||||||| | ||||||| ||||||| | |||||||||||| ||| ||||| || ||| ||||| |||||||| ||||    
T  32066453 ctaggatagcttataaaaacagcttatagctcatatgaacacggttt-aatttattttatct-tttgttataaaagtagtttatacataagcacttata 32066549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 210
Target Start/End: Complemental strand, 32724116 - 32724043
Alignment:
Q  136 ttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaa 210  Q
    |||||||||||  ||||||||||||||||||| ||| | |||||||||||||| | ||||||||  |||||||||    
T  32724116 ttatatgaaaatagtttgactttattttatct-tttgtaatagaaatagattagacataagcactgatatgagaa 32724043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 73 - 183
Target Start/End: Complemental strand, 49219199 - 49219090
Alignment:
Q  73 ataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctctttt 172  Q
    |||||||||||| | ||| ||||||||| || | ||  |||| |||| |||||| ||||||| |||||||||||   |||||||||||||||| | |||     
T  49219199 ataagttgttttcagcttatttccataatctctttaagatagtttatgaaaacaacttatagcttatatgaaaataatttgactttattttatat-tttg 49219101  T
Q  173 ttatagaaata 183  Q
    |||||||||||    
T  49219100 ttatagaaata 49219090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 112 - 190
Target Start/End: Original strand, 55870390 - 55870467
Alignment:
Q  112 tagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattata 190  Q
    |||||||| |||||| ||||||| |||| ||||||| |||||||||||||| |||| ||| ||||| |||| |||||||    
T  55870390 tagcttatgaaaacaacttatagcttatgtgaaaacagtttgactttatttgatct-tttgttataaaaatggattata 55870467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 92 - 160
Target Start/End: Complemental strand, 18020013 - 18019944
Alignment:
Q  92 tttccataagctttctagcatagcttattaaaacagcttata-gtttatatgaaaacggtttgactttat 160  Q
    ||||||||| || ||||||||||||||| |||||| || | | |||||||||||||| ||||||||||||    
T  18020013 tttccataaactctctagcatagcttatgaaaacaactcacaagtttatatgaaaacagtttgactttat 18019944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 25 - 165
Target Start/End: Complemental strand, 23819197 - 23819057
Alignment:
Q  25 ttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagct-ttctagcatagcttattaaa 123  Q
    |||||||  ||||||  |||||||| | ||||| ||||||   |||| |||||||||||| ||||| |||| ||||||| ||| || ||||||||| |||    
T  23819197 ttgtgagactgtttggaagagtttaagaaaacagcttatgacatgtccataagttgttttcatcttatttctataagctcttcaag-atagcttatgaaa 23819099  T
Q  124 acagcttatagtttatatgaaaacggtttgactttattttat 165  Q
    |||  |||||  |||||||||||| ||||||||  |||||||    
T  23819098 acatgttataacttatatgaaaacagtttgactacattttat 23819057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 111 - 228
Target Start/End: Complemental strand, 24444060 - 24443944
Alignment:
Q  111 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaa 210  Q
    ||||||||| |||||| ||||||| |||||||||||  |||||| |||||||||| | ||| || ||||||| | ||||| ||||| || ||||||| ||    
T  24444060 atagcttatgaaaacaacttatagcttatatgaaaattgtttgaatttattttatat-tttgttgtagaaatcgcttatacataagaacttatatgataa 24443962  T
Q  211 acacttatcctataagcg 228  Q
       ||||| |||||||||    
T  24443961 gtgcttatgctataagcg 24443944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 74 - 207
Target Start/End: Original strand, 30207582 - 30207713
Alignment:
Q  74 taagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttt 173  Q
    |||| |||||| | ||| ||||||||| || ||||   |||||||| |||||| ||||||| |||||||||||| |||||| |||||||||| | ||| |    
T  30207582 taagctgttttcagcttatttccataatctctctaaggtagcttatgaaaacaacttatagcttatatgaaaacagtttga-tttattttat-tttttgt 30207679  T
Q  174 tatagaaatagattatatataagcacatatatga 207  Q
    ||||||| ||   |||| |||||||| |||||||    
T  30207680 tatagaactaacatatacataagcacttatatga 30207713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 207
Target Start/End: Complemental strand, 3891611 - 3891504
Alignment:
Q  97 ataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataag 196  Q
    ||||||| ||||| ||||||||| |||||| |||| |  |||||  ||||||||| ||||||||||||||    | |||||||||||| ||||  |||||    
T  3891611 ataagctctctaggatagcttataaaaacaacttacatattatacaaaaacggttcgactttattttatc---ctgttatagaaatagtttattcataag 3891515  T
Q  197 cacatatatga 207  Q
    ||| |||||||    
T  3891514 cacttatatga 3891504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 207
Target Start/End: Complemental strand, 18630702 - 18630607
Alignment:
Q  111 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatga 207  Q
    ||||||| | |||||| ||||||| ||||||||||||   ||||||||||||||||| ||| |||| ||||||| ||||  |||||| | |||||||    
T  18630702 atagcttgtgaaaacaacttatagcttatatgaaaaccaattgactttattttatct-tttgttattgaaatagtttatgcataagcgcttatatga 18630607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 207
Target Start/End: Complemental strand, 19422420 - 19422345
Alignment:
Q  131 atagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatga 207  Q
    ||||||||||||||||  ||||||||||||| ||||| ||| |||||||||||  ||||| |||||||  |||||||    
T  19422420 atagtttatatgaaaaatgtttgactttattatatct-tttgttatagaaataacttatacataagcatttatatga 19422345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 103
Target Start/End: Original strand, 27123312 - 27123392
Alignment:
Q  23 acttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagct 103  Q
    |||||||||  |||||| ||||| ||||||||||||||||||   ||||  ||||||||||| | ||| ||||||||||||    
T  27123312 acttgtgagactgtttgagagagcttatggaaacaacttatgacatgtctttaagttgttttcaacttatttccataagct 27123392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 167
Target Start/End: Complemental strand, 46859952 - 46859896
Alignment:
Q  111 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 167  Q
    |||| |||| |||||||||||||| || |||||||| | ||||||||||||||||||    
T  46859952 ataggttataaaaacagcttatagattgtatgaaaatgatttgactttattttatct 46859896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 112 - 167
Target Start/End: Original strand, 13949893 - 13949948
Alignment:
Q  112 tagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 167  Q
    ||||||||  ||||| ||||||| ||||||||||||  ||||||||||||||||||    
T  13949893 tagcttatacaaacaacttatagcttatatgaaaacaatttgactttattttatct 13949948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 167
Target Start/End: Original strand, 6987703 - 6987845
Alignment:
Q  25 ttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaa 124  Q
    |||||||  |||||| ||||| ||||||| ||||||||||   |||| ||||  | |||| | ||| |||||||||||| || || ||||| ||  ||||    
T  6987703 ttgtgagactgtttgggagagcttatggatacaacttatgacatgtccataaactattttcaacttatttccataagctctccaggatagcgtaaaaaaa 6987802  T
Q  125 cagcttatagtttatatgaaaacggtttgactttattttatct 167  Q
     | || |||||| ||| |||||| |||||||||| ||||||||    
T  6987803 taactaatagttaatacgaaaacagtttgactttgttttatct 6987845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 115 - 197
Target Start/End: Original strand, 29373939 - 29374020
Alignment:
Q  115 cttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagc 197  Q
    ||||| ||||||  |||||| ||||||||| ||  |||||| ||||||||||| | | |||||||||||| ||||||||||||    
T  29373939 cttatgaaaacaaattatagcttatatgaatacattttgacattattttatct-tctgttatagaaatagcttatatataagc 29374020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 167
Target Start/End: Original strand, 31038877 - 31038971
Alignment:
Q  73 ataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 167  Q
    |||||||||||| | ||| |||| ||||| | ||||  | ||||||| ||||  |||||||  ||||||||||||  ||||||||||||||||||    
T  31038877 ataagttgttttcaacttatttctataagttctctattagagcttataaaaatggcttataacttatatgaaaacaatttgactttattttatct 31038971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 207
Target Start/End: Complemental strand, 47970302 - 47970245
Alignment:
Q  149 gtttgactttattttatctcttttttatagaaatagattatatataagcacatatatga 207  Q
    ||||||||| ||||||||| ||| |||||||||||| ||||| |||||||| |||||||    
T  47970302 gtttgacttcattttatct-tttgttatagaaatagcttatacataagcacttatatga 47970245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 198
Target Start/End: Complemental strand, 50746017 - 50745936
Alignment:
Q  116 ttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagca 198  Q
    |||| |||||| ||| |||||||||| ||||| |||||| |||||||||||| ||| ||||| |||||| ||| | |||||||    
T  50746017 ttataaaaacaacttgtagtttatataaaaacagtttgattttattttatct-tttgttataaaaatagcttagacataagca 50745936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 84
Target Start/End: Complemental strand, 2841732 - 2841675
Alignment:
Q  27 gtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgtttt 84  Q
    ||||| ||||||| ||||||||||| || |||||||||   |||||||||||||||||    
T  2841732 gtgagattgtttgcgagagtttatgaaagcaacttatgacatgtcaataagttgtttt 2841675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 167
Target Start/End: Complemental strand, 2996672 - 2996539
Alignment:
Q  34 tgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttata 133  Q
    |||||| ||||| ||||| ||||||||||||   |||| ||||| | |||| | ||| ||| |||| ||| || |  ||||||||| |||||| ||||||    
T  2996672 tgtttgagagagcttatgaaaacaacttatgacatgtccataagcttttttcaacttattttcatacgctctccaagatagcttatgaaaacaacttata 2996573  T
Q  134 gtttatatgaaaacggtttgactttattttatct 167  Q
      |||||| |||||  ||||||| ||||||||||    
T  2996572 acttatataaaaacaatttgactgtattttatct 2996539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 190
Target Start/End: Complemental strand, 21953297 - 21953217
Alignment:
Q  109 gcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattata 190  Q
    ||||||||||| ||||  |||||||| |||||| ||||  |||||||||||||||  || ||| |||||||||||| |||||    
T  21953297 gcatagcttatcaaaatggcttatagcttatataaaaagagtttgactttattttccct-tttgttatagaaatagtttata 21953217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 167
Target Start/End: Original strand, 32920431 - 32920504
Alignment:
Q  94 tccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 167  Q
    ||||||| ||||  || ||| ||||| |||||| ||||||| || ||| |||||| ||||||||||||||||||    
T  32920431 tccataaacttttcaggataacttatgaaaacaacttatagcttctattaaaacgatttgactttattttatct 32920504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 166
Target Start/End: Original strand, 42321937 - 42321982
Alignment:
Q  121 aaaacagcttatagtttatatgaaaacggtttgactttattttatc 166  Q
    |||||| |||||| |||||||||||||  |||||||||||||||||    
T  42321937 aaaacaacttataatttatatgaaaacaatttgactttattttatc 42321982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 154
Target Start/End: Complemental strand, 42866108 - 42866047
Alignment:
Q  93 ttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttga 154  Q
    ||||||||||| || || ||||||||| |||||| ||||||| |||||| ||||| ||||||    
T  42866108 ttccataagctctcaaggatagcttatgaaaacaacttatagcttatataaaaacagtttga 42866047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 146
Target Start/End: Complemental strand, 43824343 - 43824270
Alignment:
Q  73 ataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaa 146  Q
    |||||||||||| | ||| ||||||||||||||| || ||| ||||  |||| ||||||||  |||||||||||    
T  43824343 ataagttgttttcagcttatttccataagctttccaggataacttacgaaaaaagcttataacttatatgaaaa 43824270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 167
Target Start/End: Complemental strand, 927498 - 927442
Alignment:
Q  111 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 167  Q
    |||||||||  |||||  |||||| |||||||||||| |||||||||||||| ||||    
T  927498 atagcttatgcaaacaagttatagcttatatgaaaacagtttgactttatttcatct 927442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 167
Target Start/End: Complemental strand, 3175973 - 3175917
Alignment:
Q  111 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 167  Q
    ||||||||| |||||||||||||  |||  |||||||  ||||||||||||||||||    
T  3175973 atagcttatgaaaacagcttataacttacttgaaaacaatttgactttattttatct 3175917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 189
Target Start/End: Original strand, 7368090 - 7368181
Alignment:
Q  98 taagctttctagcatagcttattaaaacagcttata-gtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattat 189  Q
    |||||| ||||| |||||||||  ||||| |||||| | ||||||||||||  ||||||||||||||| || ||| | |||||||||| ||||    
T  7368090 taagctctctagaatagcttatggaaacaacttataagcttatatgaaaacaatttgactttatttta-ctttttatcatagaaatagtttat 7368181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 163
Target Start/End: Original strand, 18628555 - 18628643
Alignment:
Q  75 aagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttatttt 163  Q
    |||||||||| | ||| |||||||||||| || |  ||| ||||| ||||||| |||||  |||||| ||||| |||||||| ||||||    
T  18628555 aagttgttttcagcttatttccataagctctccaagataacttatgaaaacagtttataacttatataaaaacagtttgactatatttt 18628643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 225
Target Start/End: Complemental strand, 30024704 - 30024609
Alignment:
Q  129 ttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaaacacttatcctataa 225  Q
    |||||| ||||||||||||  ||| |||||||||||||| ||| |||||||||||  ||||  ||||| || ||||||| |||| ||| | ||||||    
T  30024704 ttatagcttatatgaaaacaattttactttattttatct-tttgttatagaaataacttatgcataagtacttatatgataaacgcttctactataa 30024609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 115 - 163
Target Start/End: Original strand, 41097295 - 41097343
Alignment:
Q  115 cttattaaaacagcttatagtttatatgaaaacggtttgactttatttt 163  Q
    ||||| |||||||||||||| | |||||||||| ||||||||| |||||    
T  41097295 cttatgaaaacagcttataggtaatatgaaaacagtttgacttaatttt 41097343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 184
Target Start/End: Original strand, 41701514 - 41701561
Alignment:
Q  136 ttatatgaaaacggtttgactttattttatctcttttttatagaaatag 184  Q
    ||||||||||||| |||||||||||||||||| ||| ||||| ||||||    
T  41701514 ttatatgaaaacgatttgactttattttatct-tttgttatataaatag 41701561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 167
Target Start/End: Complemental strand, 51630133 - 51630077
Alignment:
Q  111 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 167  Q
    ||||||||| |||| ||||||||| |||||| |||||  ||| ||||||||||||||    
T  51630133 atagcttatgaaaatagcttatagcttatatcaaaacaatttaactttattttatct 51630077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 145
Target Start/End: Complemental strand, 56055810 - 56055739
Alignment:
Q  73 ataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaa 145  Q
    |||||||||||| ||||| ||| ||||||| ||| || ||||||  |||||| ||||||||| ||||||||||    
T  56055810 ataagttgtttttatcttattttcataagc-ttccaggatagctagttaaaatagcttatagcttatatgaaa 56055739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 5e-19; HSPs: 66)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 111 - 207
Target Start/End: Original strand, 17952749 - 17952844
Alignment:
Q  111 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatga 207  Q
    ||||||||| |||||| ||| ||| |||||||||||  ||||||||||||||||||| ||| |||||||||||| |||||||||||| | |||||||    
T  17952749 atagcttatgaaaacatcttgtagcttatatgaaaatagtttgactttattttatct-tttgttatagaaatagcttatatataagctcttatatga 17952844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 41 - 166
Target Start/End: Complemental strand, 9556331 - 9556206
Alignment:
Q  41 gagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttata 140  Q
    ||||| ||||| |||||||| |||   |||| |||||| | ||| | ||| ||| |||||||||||||| ||||||||| ||||||| |||||| || ||    
T  9556331 gagagcttatgaaaacaactaatgacatgtccataagtagatttcaacttattttcataagctttctaggatagcttatgaaaacagtttatagcttgta 9556232  T
Q  141 tgaaaacggtttgactttattttatc 166  Q
    |||||||   ||||||||||||||||    
T  9556231 tgaaaacacgttgactttattttatc 9556206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 94 - 207
Target Start/End: Original strand, 28803537 - 28803649
Alignment:
Q  94 tccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatat 193  Q
    |||||||||| || || |||| |||  |||||| ||| ||| |||||||||| | ||||||||||||||||||| ||| |||| ||||||  ||||||||    
T  28803537 tccataagctctccaggatagtttaagaaaacaacttgtagcttatatgaaatcagtttgactttattttatct-tttgttatcgaaataacttatatat 28803635  T
Q  194 aagcacatatatga 207  Q
    |||||| |||||||    
T  28803636 aagcacttatatga 28803649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 114 - 167
Target Start/End: Complemental strand, 33256759 - 33256706
Alignment:
Q  114 gcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 167  Q
    |||||| ||||| ||||||||||||||||||||| |||||||||||||||||||    
T  33256759 gcttatgaaaactgcttatagtttatatgaaaacagtttgactttattttatct 33256706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 96 - 207
Target Start/End: Original strand, 33267556 - 33267659
Alignment:
Q  96 cataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataa 195  Q
    |||||||| || |||||||||||| |||||||||||||       ||||||| |||| ||||||||||| || ||| |||||||||||||||||| ||||    
T  33267556 cataagctctccagcatagcttataaaaacagcttata-------tgaaaacagtttaactttatttta-ctgtttgttatagaaatagattatacataa 33267647  T
Q  196 gcacatatatga 207  Q
    |||| |||||||    
T  33267648 gcacttatatga 33267659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 95 - 199
Target Start/End: Complemental strand, 12215845 - 12215742
Alignment:
Q  95 ccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatata 194  Q
    ||||||||| || || || |||||| ||||||||||||||  |||||| |||||| | ||||||||||||||| ||| || ||||||||| ||||| |||    
T  12215845 ccataagctctcaaggatggcttataaaaacagcttatagcatatatggaaacgggtcgactttattttatct-tttgttgtagaaatagtttatacata 12215747  T
Q  195 agcac 199  Q
    |||||    
T  12215746 agcac 12215742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 73 - 184
Target Start/End: Complemental strand, 6227811 - 6227701
Alignment:
Q  73 ataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctctttt 172  Q
    |||||||||||| | |||||| ||||||||| || |  ||||||||| |||||  |||||||||||||| |||||||||| | || ||||||||| |||     
T  6227811 ataagttgttttcagcttgttaccataagctctccaaaatagcttatgaaaaccacttatagtttatataaaaacggtttaatttaattttatct-tttg 6227713  T
Q  173 ttatagaaatag 184  Q
    ||||| ||||||    
T  6227712 ttatataaatag 6227701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 111 - 214
Target Start/End: Original strand, 18962086 - 18962188
Alignment:
Q  111 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaa 210  Q
    ||||||||| |||| || |||||| |||||||||||| |||| |||||||||||||| ||| ||||| |||||| | ||| |||||||| || |||| ||    
T  18962086 atagcttatgaaaatagtttatagcttatatgaaaacagtttaactttattttatct-tttgttataaaaatagctaatacataagcacttacatgataa 18962184  T
Q  211 acac 214  Q
    ||||    
T  18962185 acac 18962188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 132 - 226
Target Start/End: Complemental strand, 18884883 - 18884789
Alignment:
Q  132 tagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaaacacttatcctataag 226  Q
    |||| ||||||||||| |||||| |||||||||| | |||||||||||||||  ||||| || ||||| ||||||| ||| ||| || |||||||    
T  18884883 tagtgtatatgaaaacagtttgattttattttatattttttttatagaaataacttatacatgagcacttatatgataaaaactaatgctataag 18884789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 73 - 167
Target Start/End: Original strand, 22681195 - 22681289
Alignment:
Q  73 ataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 167  Q
    ||||| |||||| | ||| |||||||||| | ||||| |||| |||| |||||||||||||| ||||||||||||  |||| |||| ||||||||    
T  22681195 ataagctgtttttagcttatttccataagttctctaggatagattatgaaaacagcttatagcttatatgaaaacaatttggctttgttttatct 22681289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 73 - 207
Target Start/End: Original strand, 7103492 - 7103624
Alignment:
Q  73 ataagttgttttaatcttgtttccataagctttctagcatagcttattaaaa-cagcttatagtttatatgaaaacggtttgactttattttatctcttt 171  Q
    |||||||||||| | ||| ||| || || || ||||  ||||||||| |||| |||||||||| |||||| ||||| ||||||||||||||||||   ||    
T  7103492 ataagttgtttttagcttattttcacaaactctctaagatagcttatgaaaaacagcttatagcttatattaaaacagtttgactttattttatc---tt 7103588  T
Q  172 tttatagaaatagattatatataagcacatatatga 207  Q
     ||||| | |||| || || ||||||||||||||||    
T  7103589 gttataaatatagtttctacataagcacatatatga 7103624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 54 - 193
Target Start/End: Original strand, 1939323 - 1939461
Alignment:
Q  54 aacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatag-tttatatgaaaacggttt 152  Q
    |||||||||||   |||| ||||| |||||| | ||| |||||||||||| || || ||||||||| ||||||| |||||| |  |||||||||  ||||    
T  1939323 aacaacttatgacatgtccataagctgttttcaacttatttccataagctctccagtatagcttatgaaaacag-ttatagctcaatatgaaaatagttt 1939421  T
Q  153 gactttattttatctcttttttatagaaatagattatatat 193  Q
     |||||||||||||| ||| |||||||||||  ||||||||    
T  1939422 cactttattttatct-tttgttatagaaataacttatatat 1939461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 111 - 167
Target Start/End: Original strand, 5043608 - 5043664
Alignment:
Q  111 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 167  Q
    ||||||||| |||||| ||| ||| |||||||||||| |||||||||||||||||||    
T  5043608 atagcttatgaaaacaacttctagcttatatgaaaacagtttgactttattttatct 5043664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 111 - 167
Target Start/End: Complemental strand, 11513920 - 11513864
Alignment:
Q  111 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 167  Q
    ||||||||| |||||| ||||||| ||||||||||||  ||||||||||||||||||    
T  11513920 atagcttatgaaaacaacttatagcttatatgaaaacaatttgactttattttatct 11513864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 51 - 167
Target Start/End: Complemental strand, 43141953 - 43141837
Alignment:
Q  51 ggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggt 150  Q
    ||||||||||||||   || | |||||||||||| || || ||||||||| || |  || ||||||||| |||||| ||||||| ||||||| ||||  |    
T  43141953 ggaaacaacttatgacatgcccataagttgttttcattttatttccataaactcttcaggatagcttatgaaaacatcttatagcttatatggaaacaat 43141854  T
Q  151 ttgactttattttatct 167  Q
    ||||||||| |||||||    
T  43141853 ttgactttactttatct 43141837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 203
Target Start/End: Complemental strand, 5133813 - 5133703
Alignment:
Q  92 tttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatat 191  Q
    |||||||||||| |||   ||| ||| | |||||||||||||  |||||| ||||| ||||  ||||||||||||| ||| |||||||||||| |||||     
T  5133813 tttccataagctctcttagataacttttgaaaacagcttatatcttatataaaaacagtttatctttattttatct-tttgttatagaaatagcttatac 5133715  T
Q  192 ataagcacatat 203  Q
    ||||||| ||||    
T  5133714 ataagcaaatat 5133703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 111 - 198
Target Start/End: Complemental strand, 13866911 - 13866825
Alignment:
Q  111 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagca 198  Q
    |||||| || |||| ||||||||| |||||| ||||| ||||||||| ||||||||| |||  ||||||||||| ||||| |||||||    
T  13866911 atagctaatgaaaagagcttatagattatataaaaacagtttgacttaattttatct-tttgctatagaaatagtttatacataagca 13866825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 139 - 198
Target Start/End: Original strand, 32098384 - 32098442
Alignment:
Q  139 tatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagca 198  Q
    |||||||||  |||||||||||||||||| ||| |||||||||||| |||||||||||||    
T  32098384 tatgaaaacactttgactttattttatct-tttgttatagaaatagcttatatataagca 32098442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 136 - 199
Target Start/End: Complemental strand, 33192190 - 33192128
Alignment:
Q  136 ttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcac 199  Q
    |||||||||||| ||||||||||||||||||| | | |||||||||||| || |||||||||||    
T  33192190 ttatatgaaaacagtttgactttattttatct-tatgttatagaaatagtttttatataagcac 33192128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 163
Target Start/End: Original strand, 33525945 - 33526067
Alignment:
Q  41 gagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttata 140  Q
    ||||||| |||||||||||||||    |||| |||||||| ||| | ||| |||| |||| | |||||| ||||||||| |||| |||||||    ||||    
T  33525945 gagagttcatggaaacaacttataacatgtccataagttggtttcagcttatttctataaaccttctagtatagcttatgaaaaaagcttattacatata 33526044  T
Q  141 tgaaaacggtttgactttatttt 163  Q
    ||||||  |||||||||||||||    
T  33526045 tgaaaatagtttgactttatttt 33526067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 92 - 160
Target Start/End: Original strand, 3059303 - 3059372
Alignment:
Q  92 tttccataagctttctagcatagcttattaaaacagcttata-gtttatatgaaaacggtttgactttat 160  Q
    ||||||||| || ||||||||||||||| |||||| || | | |||||||||||||| ||||||||||||    
T  3059303 tttccataaactctctagcatagcttatgaaaacaactcacaagtttatatgaaaacagtttgactttat 3059372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 207
Target Start/End: Complemental strand, 9478398 - 9478226
Alignment:
Q  34 tgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttata 133  Q
    |||||| ||||||||||| |||||||||||    |||| ||||| |||||| |||||  |||||| | || || |  ||||||||  || ||||| ||||    
T  9478398 tgtttgagagagtttatgcaaacaacttattacatgtccataagctgttttcatcttacttccatcaactctccacgatagcttacgaacacagcatata 9478299  T
Q  134 gtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatga 207  Q
    | |||||||||||   ||||| ||||||||||||   | |||||||||||| ||||| |||| ||| |||||||    
T  9478298 gcttatatgaaaatattttgagtttattttatct-actgttatagaaatagcttatacataaacacttatatga 9478226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 74 - 195
Target Start/End: Complemental strand, 25790185 - 25790065
Alignment:
Q  74 taagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttt 173  Q
    |||| |||||| | ||| ||| |||||||| || || |||| ||||  |||||  || ||| |||||||||||| ||||||||| | ||||||| |||||    
T  25790185 taagctgttttgaacttattttcataagctctccaggatagattatccaaacaatttgtagcttatatgaaaacagtttgacttcactttatct-ttttt 25790087  T
Q  174 tatagaaatagattatatataa 195  Q
    |||||||||| |||||| ||||    
T  25790086 tatagaaatatattatacataa 25790065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 46 - 167
Target Start/End: Original strand, 28039315 - 28039436
Alignment:
Q  46 tttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaa 145  Q
    |||||| |||||| |||||  ||||  ||||| |||||| | ||| |||||||||  |||| |  | ||||||| ||||  |||||||||||||||||||    
T  28039315 tttatgaaaacaagttatgacttgttcataagctgttttcagcttatttccataacttttccaagaaagcttatgaaaattgcttatagtttatatgaaa 28039414  T
Q  146 acggtttgactttattttatct 167  Q
    ||  || |||||||||||||||    
T  28039415 acaattggactttattttatct 28039436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 150 - 207
Target Start/End: Complemental strand, 31461421 - 31461365
Alignment:
Q  150 tttgactttattttatctcttttttatagaaatagattatatataagcacatatatga 207  Q
    |||||||||||||||||| ||| |||||||||||| |||||||||| ||| |||||||    
T  31461421 tttgactttattttatct-tttgttatagaaatagcttatatataaccacttatatga 31461365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 114 - 167
Target Start/End: Complemental strand, 33942169 - 33942116
Alignment:
Q  114 gcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 167  Q
    |||||| |||||| ||||||| ||| |||||||| |||||||||||||||||||    
T  33942169 gcttatgaaaacaacttatagcttacatgaaaacagtttgactttattttatct 33942116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 98 - 199
Target Start/End: Original strand, 34054936 - 34055036
Alignment:
Q  98 taagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagc 197  Q
    |||||| | ||| ||||||||| |||||| ||||||   |||||| |||| ||||| ||||||||||||| ||| ||||||||||||  |||| ||||||    
T  34054936 taagctctataggatagcttatgaaaacaccttatatcatatatgtaaacagtttgcctttattttatct-tttgttatagaaatagcctatacataagc 34055034  T
Q  198 ac 199  Q
    ||    
T  34055035 ac 34055036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 139 - 196
Target Start/End: Complemental strand, 37034038 - 37033982
Alignment:
Q  139 tatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataag 196  Q
    ||||||||  ||||||||||||||||||| |||||||||||||||| ||||| |||||    
T  37034038 tatgaaaatcgtttgactttattttatct-ttttttatagaaatagtttatacataag 37033982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 117
Target Start/End: Original strand, 41809202 - 41809299
Alignment:
Q  20 aacacttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagctt 117  Q
    ||||||||||||  || |||| |||| || |||||||||||||||   |||  |||||||||||| | ||| |||||||||||||||||  |||||||    
T  41809202 aacacttgtgagactgattgtaagagcttgtggaaacaacttatgacatgttcataagttgtttttagcttatttccataagctttctaagatagctt 41809299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 74 - 227
Target Start/End: Original strand, 42817387 - 42817539
Alignment:
Q  74 taagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttt 173  Q
    ||||||||||| | |||  ||||||||||| |  || ||||||||| ||||||| ||||   |||||||||||| | ||||||| ||||||||| |||      
T  42817387 taagttgtttttagcttacttccataagctcttcagaatagcttatgaaaacagtttattacttatatgaaaacagcttgacttcattttatct-tttgg 42817485  T
Q  174 tatagaaatagattatatataagcacatatatgagaaacacttatcctataagc 227  Q
    ||||||||||   |||| || | ||| ||||||| |||| ||||| ||||||||    
T  42817486 tatagaaataacatataaatcaacacttatatgataaacgcttatgctataagc 42817539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 226
Target Start/End: Original strand, 11393433 - 11393528
Alignment:
Q  131 atagtttatatgaaaacgg-tttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaaacacttatcctataag 226  Q
    |||| |||||||||||||  ||||| |||||| ||||| |||  ||||||||||| ||||| |||||||| ||||||| |||||||| | |||||||    
T  11393433 atagcttatatgaaaacgaatttgaatttattatatct-tttgatatagaaatagcttatagataagcacttatatgataaacacttgtgctataag 11393528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 226
Target Start/End: Original strand, 11410094 - 11410189
Alignment:
Q  131 atagtttatatgaaaacgg-tttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaaacacttatcctataag 226  Q
    |||| |||||||||||||  ||||| |||||| ||||| |||  ||||||||||| ||||| |||||||| ||||||| |||||||| | |||||||    
T  11410094 atagcttatatgaaaacgaatttgaatttattatatct-tttgatatagaaatagcttatagataagcacttatatgataaacacttgtgctataag 11410189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 199
Target Start/End: Complemental strand, 25609882 - 25609731
Alignment:
Q  47 ttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaa 146  Q
    ||||||||||||||||||     || ||| |||||||| |  || ||||| ||| |||||||| |||  || | |||||| ||||||| ||||| |||||    
T  25609882 ttatggaaacaacttatgacaaatccatatgttgttttcaatttctttccttaaactttctagtataatttctaaaaacaacttatagcttatacgaaaa 25609783  T
Q  147 cggtttgactttattttatctcttttttatagaaatagattatatataagcac 199  Q
        ||||||||||||||||| ||| |||||||||||| ||||| ||||||||    
T  25609782 taaattgactttattttatct-tttcttatagaaatagcttatacataagcac 25609731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 207
Target Start/End: Complemental strand, 37053616 - 37053521
Alignment:
Q  111 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatga 207  Q
    |||||| || |||| | ||||||  |||||||||||| ||||||||||||||||| | | | ||||||||||||  |||| |||||||| |||||||    
T  37053616 atagctaatgaaaaaaacttataacttatatgaaaacagtttgactttattttat-tttctgttatagaaatagtctatacataagcacttatatga 37053521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 48 - 167
Target Start/End: Complemental strand, 14666633 - 14666514
Alignment:
Q  48 tatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaac 147  Q
    |||||||||||||||||   |||  ||| |||||||| | ||| ||| ||||||| | | |  ||||||| | |||||| ||||||  |||||||||| |    
T  14666633 tatggaaacaacttatgacatgttcataggttgttttcaccttattttcataagcataccaagatagcttgtgaaaacaacttataacttatatgaaatc 14666534  T
Q  148 ggtttgactttattttatct 167  Q
     |||||||||||||||||||    
T  14666533 agtttgactttattttatct 14666514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 111 - 198
Target Start/End: Complemental strand, 15377787 - 15377701
Alignment:
Q  111 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagca 198  Q
    ||||||||| |||||||||||||  ||||||||||||  | | ||||||||||||| ||||  ||||||| ||| ||||| |||||||    
T  15377787 atagcttatgaaaacagcttataacttatatgaaaacaatctaactttattttatc-ctttggtatagaagtagcttataaataagca 15377701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 111 - 162
Target Start/End: Complemental strand, 18066150 - 18066099
Alignment:
Q  111 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattt 162  Q
    ||||||||| |||||||||||||| ||||||||||||  ||| |||||||||    
T  18066150 atagcttatgaaaacagcttatagcttatatgaaaacaatttaactttattt 18066099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 167
Target Start/End: Complemental strand, 18840861 - 18840762
Alignment:
Q  68 tgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 167  Q
    ||||||||||||||||| ||||| |||||||||||| || |  | | ||||| ||| ||||||||||  ||||| ||||  | ||| |||||||||||||    
T  18840861 tgtcaataagttgttttcatcttatttccataagctctccaagacatcttataaaaccagcttatagaatatattaaaatagcttggctttattttatct 18840762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 41 - 195
Target Start/End: Complemental strand, 42458041 - 42457887
Alignment:
Q  41 gagagtttatggaaacaacttatg-cattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttat 139  Q
    ||||||||||| ||||||||||   |||| ||||||||||||||| | ||| ||| |||| | | ||||  ||||||||| || |||||| | || |||     
T  42458041 gagagtttatgaaaacaacttaaaacattttcaataagttgttttcagcttattttcatatgttctctaagatagcttatgaatacagctaagagcttaa 42457942  T
Q  140 atgaaaacggtttgactttattttatctcttttttatagaaatagattatatataa 195  Q
    |  |||||  ||| |||||||||||||| |||  ||||||||||||||||| ||||    
T  42457941 acaaaaacaatttaactttattttatct-tttactatagaaatagattatacataa 42457887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 218
Target Start/End: Complemental strand, 3102710 - 3102609
Alignment:
Q  116 ttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaaacact 215  Q
    |||| ||||||||| |||| |||||| ||||  ||||||||||||||||| | |||  |||| |||||| ||||| |||||||  ||||||| ||||| |    
T  3102710 ttatgaaaacagctaatagattatataaaaatagtttgactttattttatat-tttgctataaaaatagcttatacataagcagttatatgataaacatt 3102612  T
Q  216 tat 218  Q
    |||    
T  3102611 tat 3102609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 163
Target Start/End: Original strand, 3235442 - 3235483
Alignment:
Q  121 aaaacagcttatagtttatatgaaaacggtttgactttatttt 163  Q
    |||||||||||||||||||||| |||| |||||||||||||||    
T  3235442 aaaacagcttatagtttatatg-aaacagtttgactttatttt 3235483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 217
Target Start/End: Complemental strand, 3673829 - 3673724
Alignment:
Q  111 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaa 210  Q
    |||||| || |||| | ||||||  ||||||||||||  ||| |||||||||||| | ||| |||||||||||  | ||| |||||||| ||||||| ||    
T  3673829 atagctaatgaaaaaaacttataacttatatgaaaacaatttaactttattttatat-tttgttatagaaataactaatacataagcacttatatgacaa 3673731  T
Q  211 acactta 217  Q
    |||||||    
T  3673730 acactta 3673724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 167
Target Start/End: Complemental strand, 4550789 - 4550743
Alignment:
Q  121 aaaacagcttatagtttatatgaaaacggtttgactttattttatct 167  Q
    |||||| |||||||||||||||||||| | ||||| |||||||||||    
T  4550789 aaaacaacttatagtttatatgaaaacagcttgacgttattttatct 4550743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 207
Target Start/End: Original strand, 13630339 - 13630424
Alignment:
Q  121 aaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatga 207  Q
    |||||| ||||| | |||||||||||| |||||||||||| |||||| |||  || |||||||  ||||| |||||||| |||||||    
T  13630339 aaaacaacttattgattatatgaaaacagtttgactttatcttatct-tttgatagagaaataacttatacataagcacctatatga 13630424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 162
Target Start/End: Original strand, 13736326 - 13736392
Alignment:
Q  96 cataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattt 162  Q
    |||||||| ||||| ||||||||| |||||||||||||| | || ||||||  ||||||||| ||||    
T  13736326 cataagctctctagtatagcttatgaaaacagcttatagctgatgtgaaaatagtttgacttcattt 13736392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 195
Target Start/End: Original strand, 30537537 - 30537658
Alignment:
Q  73 ataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctctttt 172  Q
    ||||| |||||||  ||| ||||  |||||| || || ||||||||  | || ||||||||| |||||||||||| |||||||||||| | |||| ||      
T  30537537 ataagctgttttaggcttatttcattaagctctccagaatagcttacgagaatagcttatagcttatatgaaaactgtttgactttatatgatct-ttag 30537635  T
Q  173 ttatagaaatagattatatataa 195  Q
    |||||||||||| ||| ||||||    
T  30537636 ttatagaaatagcttacatataa 30537658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 226
Target Start/End: Complemental strand, 35459907 - 35459818
Alignment:
Q  136 ttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaaacacttatcctataag 226  Q
    ||||| ||||||  |||||||||||||||||| |||  |||| |||||| ||||| | || ||| ||||||| |||||||||| |||||||    
T  35459907 ttatacgaaaacaatttgactttattttatct-tttggtatacaaatagcttatacaaaatcacttatatgataaacacttatgctataag 35459818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 59
Target Start/End: Complemental strand, 6547285 - 6547248
Alignment:
Q  22 cacttgtgagcttgtttgtgagagtttatggaaacaac 59  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  6547285 cacttgtgagactgtttgtgagagtttatggaaacaac 6547248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 127
Target Start/End: Complemental strand, 7283079 - 7283002
Alignment:
Q  50 tggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacag 127  Q
    |||||||||||||||   |||| |||||||||||| ||||| | |||||||||| ||   |||||||||| |||||||    
T  7283079 tggaaacaacttatgatatgtccataagttgttttcatcttatatccataagctctcccacatagcttatgaaaacag 7283002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 133
Target Start/End: Complemental strand, 11488388 - 11488277
Alignment:
Q  20 aacacttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttat 119  Q
    ||||||| | || |||||| |||||| ||||| |||||||||||| || |||| ||||||||||| | ||| ||| ||||| || || || |||||||||    
T  11488388 aacacttttaagattgtttatgagagcttatgaaaacaacttatg-atggtca-taagttgttttcagcttatttgcataatctctccaggatagcttat 11488291  T
Q  120 taaaacagcttata 133  Q
     ||| |||||||||    
T  11488290 gaaagcagcttata 11488277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 207
Target Start/End: Complemental strand, 15780099 - 15780006
Alignment:
Q  111 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatga 207  Q
    ||||||||| |||||| ||||||| |||||||||||| ||||   |||||||||||| ||| ||||||| || | ||||| ||||| || |||||||    
T  15780099 atagcttatgaaaacaacttatagattatatgaaaaccgttt--atttattttatct-tttgttatagagattgtttataaataagaacttatatga 15780006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 146
Target Start/End: Original strand, 30552614 - 30552727
Alignment:
Q  34 tgtttgtgagagtttatggaaacaacttatgcattgtcaataagtt-gttttaatcttgtttccataagctttctagcatagcttattaaaacagcttat 132  Q
    |||||| || || |||| |||||||||||||   |||||||||||| ||||| | ||| |||||||||||| ||||| |||| |||| |||| |  ||||    
T  30552614 tgtttgagataggttatcgaaacaacttatgacatgtcaataagttggtttttagcttatttccataagctctctaggatagtttatgaaaataatttat 30552713  T
Q  133 agtttatatgaaaa 146  Q
    || | |||||||||    
T  30552714 agctgatatgaaaa 30552727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 184
Target Start/End: Original strand, 31740019 - 31740079
Alignment:
Q  123 aacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatag 184  Q
    |||| ||||||| |||||||||||  ||||||||||||||||||| ||  ||||||||||||    
T  31740019 aacaacttatagcttatatgaaaatagtttgactttattttatct-ttagttatagaaatag 31740079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 217
Target Start/End: Original strand, 35329880 - 35329972
Alignment:
Q  124 acagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaaacactta 217  Q
    ||||||||||| |||| ||||| | | ||||||||||||||||| | | |||| ||||||| ||||  |||| ||| ||||||| |||||||||    
T  35329880 acagcttatagcttatgtgaaagcagcttgactttattttatct-tatgttatggaaatagtttatgcataaacacttatatgataaacactta 35329972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 115 - 207
Target Start/End: Original strand, 1493565 - 1493656
Alignment:
Q  115 cttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatga 207  Q
    ||||| |||||||| ||||| ||||||||||||   | |||||||||||||||  || ||||||||| || ||||| |||||||  |||||||    
T  1493565 cttatgaaaacagcatatagcttatatgaaaacaactagactttattttatct-attgttatagaaagagtttataaataagcaattatatga 1493656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 207
Target Start/End: Original strand, 6993757 - 6993866
Alignment:
Q  96 cataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataa 195  Q
    |||||||| || |||||||||||| |||||| | ||||| ||||||||| |   |||||| ||||||||  |||||| | ||||||||| ||| | ||||    
T  6993757 cataagctctcaagcatagcttatgaaaacaacctatagcttatatgaatataatttgaccttatttta--tcttttgtgtagaaataggttaaacataa 6993854  T
Q  196 gcacatatatga 207  Q
    | || |||||||    
T  6993855 gtacttatatga 6993866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 121 - 181
Target Start/End: Complemental strand, 9395142 - 9395083
Alignment:
Q  121 aaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaa 181  Q
    |||||||||||||| ||||||||||||  |||  ||||||||||||| |||| ||||||||    
T  9395142 aaaacagcttatagattatatgaaaacaatttagctttattttatct-ttttctatagaaa 9395083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 165
Target Start/End: Complemental strand, 9551599 - 9551547
Alignment:
Q  113 agcttattaaaacagcttatagtttatatgaaaacggtttgactttattttat 165  Q
    ||||||| |||| || ||||||||||||  ||||| |||||||||||||||||    
T  9551599 agcttatgaaaataggttatagtttatacaaaaacagtttgactttattttat 9551547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 147
Target Start/End: Complemental strand, 25800851 - 25800815
Alignment:
Q  111 atagcttattaaaacagcttatagtttatatgaaaac 147  Q
    ||||||||| |||||||||||||| ||||||||||||    
T  25800851 atagcttatgaaaacagcttatagcttatatgaaaac 25800815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 152
Target Start/End: Original strand, 26282057 - 26282117
Alignment:
Q  92 tttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggttt 152  Q
    ||||||||||||||| |  ||||| ||| | ||||||||||||||||||||| ||| ||||    
T  26282057 tttccataagctttccatgatagcctatgacaacagcttatagtttatatgataacagttt 26282117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 121 - 205
Target Start/End: Original strand, 28810431 - 28810514
Alignment:
Q  121 aaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatat 205  Q
    ||||||| |||||| ||||||| |||| ||| || |||||||||| | ||| |||||| ||||| |||||  |||||||||||||    
T  28810431 aaaacagattatagcttatatggaaacagttcgaatttattttatat-tttattataggaatagcttatacttaagcacatatat 28810514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 195
Target Start/End: Complemental strand, 29430765 - 29430695
Alignment:
Q  123 aacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataa 195  Q
    |||||||||||| ||||| |||||| ||||||||||| |||| || ||| |||||||||||| ||||| ||||    
T  29430765 aacagcttatagcttataagaaaacagtttgacttta-tttaact-tttgttatagaaatagcttatacataa 29430695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 134
Target Start/End: Complemental strand, 32821900 - 32821808
Alignment:
Q  42 agagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatag 134  Q
    ||||||||| |||||||||||||   |||| ||||| |||||| |  || |||| ||||||| | ||| ||||||||| ||||||| ||||||    
T  32821900 agagtttatagaaacaacttatgacatgtccataagctgttttcagtttatttctataagctctttaggatagcttatgaaaacagtttatag 32821808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 207
Target Start/End: Original strand, 33197327 - 33197382
Alignment:
Q  151 ttgactttattttatctcttttttatagaaatagattatatataagcacatatatga 207  Q
    ||||||||||| ||||| ||| |||||||||||| ||||| |||||||| |||||||    
T  33197327 ttgactttattctatct-tttgttatagaaatagcttatagataagcacttatatga 33197382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 121 - 165
Target Start/End: Complemental strand, 37766810 - 37766766
Alignment:
Q  121 aaaacagcttatagtttatatgaaaacggtttgactttattttat 165  Q
    |||||| ||||||||||||| ||||||  ||||||||||||||||    
T  37766810 aaaacaacttatagtttatacgaaaacattttgactttattttat 37766766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 167
Target Start/End: Original strand, 43299451 - 43299507
Alignment:
Q  112 tagcttattaaaacagcttatag-tttatatgaaaacggtttgactttattttatct 167  Q
    |||||||| |||||| ||||||| ||||||  ||||| |||||||||||||||||||    
T  43299451 tagcttatgaaaacaacttatagatttatacaaaaacagtttgactttattttatct 43299507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 2e-18; HSPs: 57)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 112 - 227
Target Start/End: Complemental strand, 47004108 - 47003994
Alignment:
Q  112 tagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaaa 211  Q
    |||||||| |||||||||||||||| |||| ||||  |||||||||||||||||||  || |||||||||||| ||| |||||| ||| ||||||| |||    
T  47004108 tagcttatgaaaacagcttatagttcatataaaaatagtttgactttattttatct-attgttatagaaatagcttacatataaacacttatatgataaa 47004010  T
Q  212 cacttatcctataagc 227  Q
    || || | ||||||||    
T  47004009 catttttgctataagc 47003994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 113 - 199
Target Start/End: Original strand, 9527140 - 9527225
Alignment:
Q  113 agcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcac 199  Q
    ||||||| |||||| |||||||||||||||||||| ||||||||||||| ||||| ||| ||||||| ||||  |||||||||||||    
T  9527140 agcttatgaaaacaacttatagtttatatgaaaacagtttgactttattatatct-tttgttatagatatagcgtatatataagcac 9527225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 22 - 227
Target Start/End: Original strand, 27481253 - 27481457
Alignment:
Q  22 cacttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttatta 121  Q
    |||||||||| ||||||||||||| |||| | || |||||| |   |||| ||||  ||||||    || |||||||||||| || |  ||||||||| |    
T  27481253 cacttgtgagattgtttgtgagagcttatagcaataacttacgatatgtctataaactgttttgggtttatttccataagctatccatgatagcttatga 27481352  T
Q  122 aaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaaacacttatcct 221  Q
    ||| | ||||||| ||||||| |||| |||||||||  ||||||| |||| |||||||||||| ||||| |||| ||| ||||| | ||||| |||| ||    
T  27481353 aaataacttatagcttatatggaaacagtttgacttcgttttatc-ctttgttatagaaatagcttatacataaacacttatataataaacatttatgct 27481451  T
Q  222 ataagc 227  Q
    ||||||    
T  27481452 ataagc 27481457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 111 - 190
Target Start/End: Original strand, 3802187 - 3802265
Alignment:
Q  111 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattata 190  Q
    ||||||| | ||||||||||||| |||||||||||||| ||||||||||||||| || ||| |||||||||||| |||||    
T  3802187 atagcttttaaaaacagcttataatttatatgaaaacgatttgactttattttacct-tttattatagaaatagcttata 3802265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 111 - 206
Target Start/End: Complemental strand, 11208471 - 11208377
Alignment:
Q  111 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatg 206  Q
    ||||||||| |||||| | ||||||||||||||||||||||||| |||||||||||| ||| || ||||| ||  |||||||||||| | ||||||    
T  11208471 atagcttatgaaaacaacatatagtttatatgaaaacggtttgagtttattttatct-tttgttgtagaattatcttatatataagcgcttatatg 11208377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 196
Target Start/End: Original strand, 27121557 - 27121718
Alignment:
Q  26 tgtgagcttgtttgtgagagtttatggaaacaacttatg-cattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaa 124  Q
    |||||| ||||||| ||||||||||||||| | |||||| ||||  ||||||| |||||| | |||||||||||||||| || || |||||||||| | |    
T  27121557 tgtgagattgtttgggagagtttatggaaatagcttatgacatt--caataagctgttttcaacttgtttccataagctctcaagtatagcttatttaca 27121654  T
Q  125 cagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataag 196  Q
    ||||       ||||||||||||  |||||||||||||||||  ||| |||||||||||  ||||| |||||    
T  27121655 cagc-------ttatatgaaaacaatttgactttattttatc-atttattatagaaatatcttatacataag 27121718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 199
Target Start/End: Complemental strand, 33894738 - 33894558
Alignment:
Q  22 cacttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagctta--- 118  Q
    ||||||||||  |||||||||||| ||||| ||||| | ||||   |||| |||||||||||| | ||| |||| |||| ||||| || ||||||||       
T  33894738 cacttgtgagactgtttgtgagagcttatgaaaacagcatatgacatgtccataagttgttttcagcttatttcaataaactttccaggatagcttaagt 33894639  T
Q  119 --ttaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcac 199  Q
      | |||||| | || || |||||||||||| ||||||||| ||||||||| ||| |||||||||||| ||||| ||||||||    
T  33894638 tgtaaaaacaacataaagcttatatgaaaacagtttgactt-attttatct-tttgttatagaaatagcttatacataagcac 33894558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 25 - 183
Target Start/End: Original strand, 48157082 - 48157239
Alignment:
Q  25 ttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaa 124  Q
    |||||||  |||||| ||||| |||| ||||||||||||||  |||| ||||| |||||| | ||| |||||||||| | ||  | ||||||| | ||||    
T  48157082 ttgtgagactgtttgggagagcttatagaaacaacttatgccatgtccataagctgttttcagcttatttccataagatctcccgaatagcttgtgaaaa 48157181  T
Q  125 cagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaata 183  Q
    ||  |||||| |||||| |||||  ||| |||||||||||||| ||| |||||||||||    
T  48157182 caaattatagcttatattaaaacaatttcactttattttatct-tttattatagaaata 48157239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 97 - 205
Target Start/End: Original strand, 28340878 - 28340985
Alignment:
Q  97 ataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataag 196  Q
    ||||||| ||||| ||||||||| |||||||||||||| |||||||| |||  |||||||| |||| |||| ||| ||||| ||||||  |||| |||||    
T  28340878 ataagctctctaggatagcttatgaaaacagcttatagcttatatgacaacaatttgacttcatttcatct-tttattataaaaatagcatatagataag 28340976  T
Q  197 cacatatat 205  Q
    ||| |||||    
T  28340977 cacttatat 28340985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 73 - 167
Target Start/End: Complemental strand, 38010774 - 38010680
Alignment:
Q  73 ataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 167  Q
    ||||| |||||| | ||| |||||||||| | ||||| |||| |||| |||||||||||||| ||||||||||||  |||| |||| ||||||||    
T  38010774 ataagctgtttttagcttatttccataagttctctaggatagattatgaaaacagcttatagcttatatgaaaacaatttggctttgttttatct 38010680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 196
Target Start/End: Complemental strand, 4966266 - 4966094
Alignment:
Q  23 acttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaa 122  Q
    |||||||||  |||||  ||||| |||| ||||| |||||||   |||| |||||||||||| |  || |||||||||||| |  || || |||||| ||    
T  4966266 acttgtgagactgtttaggagagcttatagaaaccacttatgatatgtccataagttgttttcagtttatttccataagctcttcaggatggcttatgaa 4966167  T
Q  123 aacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataag 196  Q
    |||||||||||  | |||||||||| ||||||  |||||||||| |||| || | ||||||  |||||||||||    
T  4966166 aacagcttatacctaatatgaaaactgtttgatattattttatc-ctttgttgtggaaataacttatatataag 4966094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 113 - 165
Target Start/End: Original strand, 17989073 - 17989125
Alignment:
Q  113 agcttattaaaacagcttatagtttatatgaaaacggtttgactttattttat 165  Q
    ||||||| ||||||  ||||||||||||||||||| |||||||||||||||||    
T  17989073 agcttatgaaaacaaattatagtttatatgaaaacagtttgactttattttat 17989125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 112 - 195
Target Start/End: Complemental strand, 1417285 - 1417203
Alignment:
Q  112 tagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataa 195  Q
    |||||||| |||||| ||||| | ||||||||||||  |||||||||||||||||| ||| ||||| |||||| ||||| ||||    
T  1417285 tagcttatgaaaacaacttattgcttatatgaaaacaatttgactttattttatct-tttgttatataaatagtttatacataa 1417203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 190
Target Start/End: Original strand, 5006484 - 5006635
Alignment:
Q  36 tttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagt 135  Q
    ||||||| || |||||||||||||||||    |||| |||||||||||| | ||| |  |||| | || || ||  |||||||| ||||||  |||||      
T  5006484 tttgtgaaagcttatggaaacaacttataacatgtctataagttgtttttaccttct--ccatgaactctccagggtagcttatgaaaacaatttatacc 5006581  T
Q  136 ttatatgaaaacggtttgactttattttatctcttttttatagaaatagattata 190  Q
    |||||||||||| ||||||||||||||||||| ||| |||||| ||||| |||||    
T  5006582 ttatatgaaaacagtttgactttattttatct-tttgttataggaatagcttata 5006635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 111 - 199
Target Start/End: Complemental strand, 23721528 - 23721436
Alignment:
Q  111 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctctt----ttttatagaaatagattatatataagcac 199  Q
    ||||||||| |||||| ||||||||||| |||||||  ||||||||||||| || || ||    |||||||||||||| ||||| ||||||||    
T  23721528 atagcttataaaaacaacttatagtttaaatgaaaatagtttgactttattctaactttttttattttatagaaatagtttatacataagcac 23721436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 120 - 207
Target Start/End: Complemental strand, 24973957 - 24973871
Alignment:
Q  120 taaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatga 207  Q
    |||||||| ||||||| |||||| ||||  ||||| |||||||||||| ||| |||||||||||| || || |||||||| |||||||    
T  24973957 taaaacagtttatagtctatatggaaacaatttgaatttattttatct-tttgttatagaaatagcttttacataagcacttatatga 24973871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 94 - 165
Target Start/End: Original strand, 28340427 - 28340498
Alignment:
Q  94 tccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttat 165  Q
    |||||||||| || |||||||||| | |||||| ||||||  ||| |||||||| |||||||||||||||||    
T  28340427 tccataagctctccagcatagcttctgaaaacaacttataacttacatgaaaacagtttgactttattttat 28340498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 167
Target Start/End: Complemental strand, 29363559 - 29363484
Alignment:
Q  92 tttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 167  Q
    |||||||||||| || || ||| ||||| | |||||||||||  | |||||||||| |||||||||||||||||||    
T  29363559 tttccataagctctccaggataacttatgataacagcttataactaatatgaaaacagtttgactttattttatct 29363484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 198
Target Start/End: Original strand, 3500940 - 3501100
Alignment:
Q  36 tttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagt 135  Q
    |||||||||| ||||||||| ||||||||   |||  || || |||||| | ||| |||||||| ||||  ||| |||| | || || ||| |||||| |    
T  3500940 tttgtgagagcttatggaaataacttatgacatgtacatcagctgttttcagcttatttccatacgctta-taggatagttaatgaatacaacttatatt 3501038  T
Q  136 ttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagca 198  Q
    ||||||||||| | |||||||||||||||||| ||| ||||| || ||| ||||| |||||||    
T  3501039 ttatatgaaaatgatttgactttattttatct-tttattatataattagcttatacataagca 3501100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 111 - 161
Target Start/End: Original strand, 5369739 - 5369789
Alignment:
Q  111 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttatt 161  Q
    ||||||||| ||||||||||||||  ||||||||||| |||||||||||||    
T  5369739 atagcttatgaaaacagcttatagcatatatgaaaacagtttgactttatt 5369789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 162
Target Start/End: Complemental strand, 10190836 - 10190766
Alignment:
Q  92 tttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattt 162  Q
    ||||||||||||||  || |||| |||| ||||||  ||| ||||||||||||||| ||||||||||||||    
T  10190836 tttccataagcttttaagaatagtttatgaaaacaatttacagtttatatgaaaacagtttgactttattt 10190766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 73 - 199
Target Start/End: Original strand, 27378838 - 27378962
Alignment:
Q  73 ataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctctttt 172  Q
    |||||||||||| |  || ||| |||||||| || || |||| |||| ||||||| || |||||||||||||||| |||  ||||||||||| || |||     
T  27378838 ataagttgttttcagtttattttcataagctctccaggatagtttatgaaaacagattgtagtttatatgaaaacagttctactttatttta-ct-tttg 27378935  T
Q  173 ttatagaaatagattatatataagcac 199  Q
    | |||||||||| ||||| ||||||||    
T  27378936 taatagaaatagcttatacataagcac 27378962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 73 - 199
Target Start/End: Complemental strand, 28165151 - 28165026
Alignment:
Q  73 ataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctctttt 172  Q
    ||||| |||||| | ||| |||||||||||| || |  ||||||||| || |||| |||||| |||||| |||||  |||||||| ||||||||| |||     
T  28165151 ataagctgttttcaacttatttccataagctctccatgatagcttataaagacagtttatagcttatattaaaacaatttgacttcattttatct-tttg 28165053  T
Q  173 ttatagaaatagattatatataagcac 199  Q
    ||||||||| |  ||||| ||||||||    
T  28165052 ttatagaaagaacttatacataagcac 28165026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 113 - 167
Target Start/End: Complemental strand, 31002781 - 31002727
Alignment:
Q  113 agcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 167  Q
    ||||||| |||||||||||||| |||||||||||   ||||||||||||||||||    
T  31002781 agcttatcaaaacagcttatagcttatatgaaaatattttgactttattttatct 31002727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 146
Target Start/End: Original strand, 33645939 - 33646044
Alignment:
Q  41 gagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatag-tttat 139  Q
    ||||| ||||||||||||||||||   |||| |||||||||||| |  || |||||||||||| || || ||||||||| ||||||| |||||| || ||    
T  33645939 gagagcttatggaaacaacttatgacatgtctataagttgtttttaggttatttccataagctctccag-atagcttatgaaaacagtttatagcttaat 33646037  T
Q  140 atgaaaa 146  Q
    |||||||    
T  33646038 atgaaaa 33646044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 68 - 162
Target Start/End: Complemental strand, 44822024 - 44821930
Alignment:
Q  68 tgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattt 162  Q
    ||||||||||||||||| | ||| ||| |||||| | || || ||||||||| |||||||||||||  |||||  |||||  |||||||||||||    
T  44822024 tgtcaataagttgttttcaacttattttcataagttctccagaatagcttatgaaaacagcttataacttatacaaaaacaatttgactttattt 44821930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 121 - 167
Target Start/End: Original strand, 45777229 - 45777275
Alignment:
Q  121 aaaacagcttatagtttatatgaaaacggtttgactttattttatct 167  Q
    |||||| |||||||||||||||||||| ||||||||| |||||||||    
T  45777229 aaaacaacttatagtttatatgaaaacagtttgacttaattttatct 45777275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 121 - 199
Target Start/End: Original strand, 45813238 - 45813315
Alignment:
Q  121 aaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcac 199  Q
    |||||| ||||||| ||||||||||||   ||||||||||||||||| |||  ||||||||||| ||||| ||||||||    
T  45813238 aaaacaacttatagattatatgaaaacaagttgactttattttatct-tttggtatagaaatagcttataaataagcac 45813315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 96 - 196
Target Start/End: Original strand, 2048075 - 2048172
Alignment:
Q  96 cataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataa 195  Q
    |||||||||||||| |||||||||  ||| ||||||||| |||| ||||| | ||||||||||| ||||  |||||| || |||||||| ||||| ||||    
T  2048075 cataagctttctag-atagcttatgtaaaaagcttatagcttatctgaaatcagtttgactttaattta--tcttttgtaaagaaatagcttatacataa 2048171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 111 - 204
Target Start/End: Complemental strand, 27548285 - 27548193
Alignment:
Q  111 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatata 204  Q
    ||||||||| |||||||||||||| ||| ||||||||  || ||||||||||||||| |||  ||  ||||||| ||||| |||||||| ||||    
T  27548285 atagcttatgaaaacagcttatagcttaaatgaaaacaattagactttattttatct-tttgctaaggaaatagcttatagataagcacttata 27548193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 217
Target Start/End: Original strand, 45593792 - 45593872
Alignment:
Q  136 ttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaaacactta 217  Q
    |||||||||||| ||||||||||||||||| | ||| ||| |||||||| ||||| |||||||  ||||||| |||| ||||    
T  45593792 ttatatgaaaacagtttgactttattttatgt-tttgttacagaaatagcttatacataagcatttatatgataaactctta 45593872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 111 - 180
Target Start/End: Complemental strand, 46825120 - 46825052
Alignment:
Q  111 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaa 180  Q
    ||||||||| ||||| | |||| | ||||||||||||  |||||||||||||||||| ||||||||||||    
T  46825120 atagcttatgaaaacggtttatggcttatatgaaaacaatttgactttattttatct-ttttttatagaa 46825052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 184
Target Start/End: Original strand, 2727409 - 2727480
Alignment:
Q  112 tagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatag 184  Q
    |||||||| ||||||  |||||||| |||||||||  ||||| ||||||||||||| ||| ||||||||||||    
T  2727409 tagcttataaaaacaatttatagttgatatgaaaagagtttgcctttattttatct-tttgttatagaaatag 2727480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 207
Target Start/End: Complemental strand, 3241435 - 3241368
Alignment:
Q  139 tatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatga 207  Q
    ||||||||| ||||||||||||||| | | ||| |||||||||||| || ||||||||||| |||||||    
T  3241435 tatgaaaacagtttgactttattttttat-tttgttatagaaatagcttctatataagcacttatatga 3241368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 207
Target Start/End: Complemental strand, 7244696 - 7244629
Alignment:
Q  139 tatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatga 207  Q
    ||||||||| |||||||||| |||||||| |||  ||||||||||| ||||| |||||||| |||||||    
T  7244696 tatgaaaacagtttgactttcttttatct-tttgatatagaaatagcttatacataagcacttatatga 7244629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 167
Target Start/End: Complemental strand, 12110382 - 12110326
Alignment:
Q  111 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 167  Q
    ||||||||| |||||||||||||| |||||  |||||  ||||||||||||||||||    
T  12110382 atagcttatgaaaacagcttatagcttataccaaaacaatttgactttattttatct 12110326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 199
Target Start/End: Complemental strand, 33709466 - 33709382
Alignment:
Q  115 cttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcac 199  Q
    ||||| ||||||| |||||| ||||||||| |  |||||| |||||||||||| ||| ||| || ||||| ||||| ||||||||    
T  33709466 cttatgaaaacagtttatagcttatatgaagatagtttgattttattttatctttttattaaagcaatagtttatacataagcac 33709382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 204
Target Start/End: Complemental strand, 46082129 - 46081963
Alignment:
Q  40 tgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagctt--attaaaacagcttatagttt 137  Q
    |||||| ||||| ||||||||||||   || | |||||||||||| | ||| ||| |||||||| || || ||||| |  || |||||| ||||||  ||    
T  46082129 tgagagcttatgaaaacaacttatgacatgaccataagttgttttcagcttattttcataagctctccagaatagcgtctatgaaaacaacttataactt 46082030  T
Q  138 atatgaaaacggttt-gactttattttatctcttttttatagaaatagattatatataagcacatata 204  Q
    |||||||||| |||| |||||| ||||| || ||  |||||||||||| |||||||||| ||| ||||    
T  46082029 atatgaaaacagttttgactttgttttaact-ttcgttatagaaatagcttatatataatcacttata 46081963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 134
Target Start/End: Original strand, 46281119 - 46281211
Alignment:
Q  42 agagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatag 134  Q
    |||||||| |||||||||||||||  |||| |||| ||||||| | ||| |||  ||||||  || || ||||||||| ||||||||||||||    
T  46281119 agagtttacggaaacaacttatgccatgtctataaattgttttcagcttatttatataagccctccagaatagcttataaaaacagcttatag 46281211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 167
Target Start/End: Complemental strand, 3468727 - 3468580
Alignment:
Q  20 aacacttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttat 119  Q
    ||||||| ||||  |||||  |||||||  ||||||||||| |||   |||| |||||||||||  | ||| |||||| ||| | ||||| |||| ||||    
T  3468727 aacacttttgagactgtttcggagagttgttggaaacaactaatgacatgtccataagttgtttccaacttatttccacaagttctctaggatagattat 3468628  T
Q  120 taaaacagcttatagtttatatgaaaacggtttgactttattttatct 167  Q
     |||| ||||||||  ||||| |||||  ||||||||| |||||||||    
T  3468627 gaaaaaagcttataacttatacgaaaatagtttgacttcattttatct 3468580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 126 - 197
Target Start/End: Complemental strand, 35536114 - 35536044
Alignment:
Q  126 agcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagc 197  Q
    ||||||||  ||||||||||||  |||||||||||||||||| | | |||||||||||| ||||| ||||||    
T  35536114 agcttataacttatatgaaaacaatttgactttattttatct-tatgttatagaaatagcttatacataagc 35536044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 73 - 184
Target Start/End: Original strand, 40688996 - 40689106
Alignment:
Q  73 ataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctctttt 172  Q
    ||||| |||||| | ||| ||| |||||| | || || ||||||||| || ||||||||||| |||||||||||   ||| |||||||||||||| |||     
T  40688996 ataagctgttttgagcttattttcataagttatccaggatagcttatgaacacagcttatagcttatatgaaaataatttaactttattttatct-tttg 40689094  T
Q  173 ttatagaaatag 184  Q
     |||||||||||    
T  40689095 ctatagaaatag 40689106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 167
Target Start/End: Original strand, 44151485 - 44151584
Alignment:
Q  68 tgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 167  Q
    |||| ||||| |||||| | ||| ||||||||||||||  |  |||| |||| |||||| ||||||| ||||||| |||| |||| |||||||| |||||    
T  44151485 tgtccataagatgttttcagcttatttccataagcttttcaagatagtttatgaaaacaacttatagcttatatggaaacagttttactttattctatct 44151584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 199
Target Start/End: Complemental strand, 5276216 - 5276159
Alignment:
Q  141 tgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcac 199  Q
    |||||||||||||||||||| |||||| ||| ||||| |||||| ||||| ||||||||    
T  5276216 tgaaaacggtttgactttatgttatct-tttgttataaaaatagcttatacataagcac 5276159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 131
Target Start/End: Original strand, 9423576 - 9423662
Alignment:
Q  45 gtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagctta 131  Q
    |||||||||||||| |||||   |||  |||||||||||| | ||| |||| | ||||| || || |||||||||||||||||||||    
T  9423576 gtttatggaaacaatttatgacatgttcataagttgttttcagcttatttcaagaagctctccaggatagcttattaaaacagctta 9423662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 205
Target Start/End: Complemental strand, 15328600 - 15328535
Alignment:
Q  139 tatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatat 205  Q
    |||| ||||| ||| |||||||||||||| ||| |||||||||||||||||  |||||||| |||||    
T  15328600 tatgtaaacgatttaactttattttatct-tttattatagaaatagattatgcataagcacttatat 15328535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 196
Target Start/End: Complemental strand, 42656498 - 42656453
Alignment:
Q  150 tttgactttattttatctcttttttatagaaatagattatatataag 196  Q
    |||||||||||||||||| ||| |||||||||||| |||||||||||    
T  42656498 tttgactttattttatct-tttgttatagaaatagcttatatataag 42656453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 184
Target Start/End: Complemental strand, 2999181 - 2999141
Alignment:
Q  143 aaaacggtttgactttattttatctcttttttatagaaatag 184  Q
    ||||||||||||||||||||||||| ||| ||||||||||||    
T  2999181 aaaacggtttgactttattttatct-tttgttatagaaatag 2999141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 199
Target Start/End: Complemental strand, 7274482 - 7274396
Alignment:
Q  111 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcac 199  Q
    ||||||||| |||| |||| ||||  || |||||||| ||||  |||||||||||||  || || ||||||||| ||||||||||||||    
T  7274482 atagcttatgaaaatagctgatagcatacatgaaaacagtttacctttattttatct--ttgttgtagaaatagtttatatataagcac 7274396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 228
Target Start/End: Complemental strand, 24975906 - 24975810
Alignment:
Q  131 atagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaaacacttatcctataagcg 228  Q
    |||| |||||| ||||| ||| | ||||||||||||| ||| |||||||| ||||||||| || ||||| ||||||| || ||| ||| ||| |||||    
T  24975906 atagcttatataaaaacagttcgcctttattttatct-tttgttatagaagtagattatacatcagcacttatatgataagcacatatgctacaagcg 24975810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 146
Target Start/End: Complemental strand, 25507385 - 25507336
Alignment:
Q  97 ataagctttctagcatagcttattaaaacagcttatagtttatatgaaaa 146  Q
    ||||||||||||| ||| ||||| |||||| ||||||| |||||||||||    
T  25507385 ataagctttctagaataacttatgaaaacaacttatagcttatatgaaaa 25507336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 198
Target Start/End: Original strand, 37064230 - 37064357
Alignment:
Q  73 ataagttgttttaatcttgtttccataagctttctagcatagct--tattaaaacagctt-atagtttatatgaaaacggtttgactttattttatctct 169  Q
    ||||||||||||||  || ||| |||||||| ||||  ||||||  ||| |||||| ||| | |||||||||||||||  || ||||||||||| | | |    
T  37064230 ataagttgttttaagtttattttcataagctctctatgatagcttatatgaaaacaacttaagagtttatatgaaaacaattcgactttattttttgt-t 37064328  T
Q  170 tttttatagaaatagattatatataagca 198  Q
    |||||| |||||||| ||| |||||||||    
T  37064329 tttttacagaaatagtttagatataagca 37064357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 121 - 217
Target Start/End: Complemental strand, 5373237 - 5373142
Alignment:
Q  121 aaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaaacactta 217  Q
    |||||| ||||||  |||||| |||| | || ||||||||||||||| ||| ||||||||||||  |||| |||||||| || |||| || ||||||    
T  5373237 aaaacaacttataacttatataaaaatgtttggactttattttatct-tttgttatagaaatagcatatacataagcacttacatgataagcactta 5373142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 184
Target Start/End: Complemental strand, 22759227 - 22759136
Alignment:
Q  92 tttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatag 184  Q
    |||||||||||| ||  | ||||||||| ||| |||||| ||| ||||||||||||  |||  ||||||||||||| ||| ||||| ||||||    
T  22759227 tttccataagctctcctggatagcttatgaaatcagcttttagcttatatgaaaacaattttcctttattttatct-tttgttatacaaatag 22759136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 207
Target Start/End: Complemental strand, 27492817 - 27492722
Alignment:
Q  111 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatga 207  Q
    ||||||||| |||||| |||||   |||||||||||  |||||| ||||||| | || ||| |||||||||||| ||||| ||||| || |||||||    
T  27492817 atagcttatgaaaacatcttattacttatatgaaaaaagtttgattttatttgaact-tttgttatagaaatagtttatacataagaacttatatga 27492722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 36538021 - 36537977
Alignment:
Q  20 aacacttgtgagcttgtttgtgagagtttatggaaacaacttatg 64  Q
    |||||||||||| ||||||| ||||  ||||||||||||||||||    
T  36538021 aacacttgtgagattgtttgagagaacttatggaaacaacttatg 36537977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 139 - 167
Target Start/End: Original strand, 44178999 - 44179027
Alignment:
Q  139 tatgaaaacggtttgactttattttatct 167  Q
    |||||||||||||||||||||||||||||    
T  44178999 tatgaaaacggtttgactttattttatct 44179027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 34 - 228
Target Start/End: Complemental strand, 27675 - 27482
Alignment:
Q  34 tgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttata 133  Q
    |||||| ||||| ||||||||| | ||||||   || | |||||||||||| | ||| |||||| | |||| | |  |||| |||| |||||| ||||||    
T  27675 tgtttgggagagcttatggaaatagcttatgacatggctataagttgttttcagcttatttccacacgcttaccaagatagtttatgaaaacaacttata 27576  T
Q  134 gtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaaacacttatcctataagcg 228  Q
    ||||||||||||||  |||||||||||||||||| | | |||||||||||  ||||| |||||||| || |||| ||   ||||| |||||||||    
T  27575 gtttatatgaaaacaatttgactttattttatct-tctgttatagaaataacttatacataagcacttacatgataagagcttatgctataagcg 27482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 72)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 93 - 199
Target Start/End: Complemental strand, 15361753 - 15361646
Alignment:
Q  93 ttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatc-tcttttttatagaaatagattatat 191  Q
    |||||||| || || || ||| ||||| |||||||||||||| |||||||||||   |||||||||| |||||| ||||| |||||||||||| ||| |     
T  15361753 ttccataaactctcaagaatatcttatgaaaacagcttatagcttatatgaaaataatttgactttactttatcttctttgttatagaaatagtttacac 15361654  T
Q  192 ataagcac 199  Q
    ||||||||    
T  15361653 ataagcac 15361646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 184
Target Start/End: Original strand, 30259465 - 30259607
Alignment:
Q  42 agagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagctt-attaaaacagcttatagtttata 140  Q
    |||| |||| ||||||||||| |   ||||||||| ||||||| | ||| |||||||||||| || |  ||||||| ||  ||||||||||||| |||||    
T  30259465 agagcttatagaaacaacttacgacatgtcaataaattgttttcaacttatttccataagctctccatgatagctttatgcaaacagcttatagcttata 30259564  T
Q  141 tgaaaacggtttgactttattttatctcttttttatagaaatag 184  Q
    | ||| | ||||||||||||||||| | ||| ||||||||||||    
T  30259565 tcaaagcagtttgactttattttatat-tttgttatagaaatag 30259607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 167
Target Start/End: Original strand, 39347972 - 39348071
Alignment:
Q  68 tgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 167  Q
    |||| |||||||||||| | ||| ||||||||||||||  || |||| |||| |||||| ||||||| || ||||| || |||| |||||||||||||||    
T  39347972 tgtccataagttgttttcagcttatttccataagctttgcaggatagtttatgaaaacaacttatagcttgtatgagaatggttggactttattttatct 39348071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 112 - 183
Target Start/End: Complemental strand, 49517091 - 49517021
Alignment:
Q  112 tagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaata 183  Q
    |||||||| |||||||||||||| ||| ||||||||  |||||||||||||||||| ||| |||||||||||    
T  49517091 tagcttatgaaaacagcttatagcttaaatgaaaacaatttgactttattttatct-tttgttatagaaata 49517021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 75 - 198
Target Start/End: Complemental strand, 52013956 - 52013833
Alignment:
Q  75 aagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctctttttt 174  Q
    |||||||||| | ||| |||||||||||  ||||| ||||||||  ||||||| || ||  |||||||||||| || || |||| || ||||| || |||    
T  52013956 aagttgtttttaacttatttccataagcactctaggatagcttacgaaaacaggttttaccttatatgaaaacagtatgtctttgttatatcttttcttt 52013857  T
Q  175 atagaaatagattatatataagca 198  Q
    |||||||||| ||||| |||||||    
T  52013856 atagaaatagcttatacataagca 52013833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 73 - 167
Target Start/End: Original strand, 10199418 - 10199512
Alignment:
Q  73 ataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 167  Q
    |||||||||||| | ||| ||| |||||||| ||||  ||||||||| |||| ||||||| | ||||| |||||  |||||||||||||||||||    
T  10199418 ataagttgttttcagcttattttcataagctctctaaaatagcttatgaaaaaagcttatcgattatacgaaaatagtttgactttattttatct 10199512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 42 - 196
Target Start/End: Complemental strand, 17420294 - 17420141
Alignment:
Q  42 agagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatat 141  Q
    |||| ||||| |||||||||||    |||| |||| ||||||| | ||| ||||||| || |||||   ||||||||  ||||||| |||||| ||||||    
T  17420294 agagcttatgaaaacaacttattacatgtccataaattgttttcaacttatttccattagttttctgagatagcttacgaaaacagtttatagcttatat 17420195  T
Q  142 gaaaacggtttgactttattttatctcttttttatagaaatagattatatataag 196  Q
    |||||  ||| ||||||||||||||| ||| ||||| |||||| ||||| |||||    
T  17420194 gaaaattgttcgactttattttatct-tttcttataaaaatagtttatacataag 17420141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 115 - 189
Target Start/End: Original strand, 33527199 - 33527272
Alignment:
Q  115 cttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattat 189  Q
    ||||| |||||||||||||| |||||||||||| |||||||| |||||||||| ||| || ||||||||| ||||    
T  33527199 cttatgaaaacagcttatagattatatgaaaacagtttgactgtattttatct-tttgttttagaaatagcttat 33527272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 192
Target Start/End: Original strand, 7218122 - 7218202
Alignment:
Q  111 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatata 192  Q
    |||| |||| |||||| ||||||| ||||||||||||  ||||||||||||||| || ||| |||| |||||||||||||||    
T  7218122 ataggttatgaaaacaacttatagcttatatgaaaacaatttgactttattttacct-tttattatggaaatagattatata 7218202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 167
Target Start/End: Complemental strand, 15581365 - 15581220
Alignment:
Q  22 cacttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttatta 121  Q
    |||||||||| |||||||  |||| | ||||||||||||||||   |||| ||||| |||||| | | | |||| ||||||  ||||||||| ||||| |    
T  15581365 cacttgtgagattgtttggaagagctaatggaaacaacttatgacatgtctataagctgttttcagcctatttctataagccctctagcataccttataa 15581266  T
Q  122 aaacagcttatagtttatatgaaaacggtttgactttattttatct 167  Q
    ||| ||||||||| |||||| ||||    || ||||||||||||||    
T  15581265 aaaaagcttatagcttatataaaaatatattaactttattttatct 15581220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 111 - 207
Target Start/End: Original strand, 4363680 - 4363774
Alignment:
Q  111 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatga 207  Q
    ||||||||| |||| || |||||| |||||||||||| ||||||| |||||| |||| ||| ||||| ||||||| |||| |||||||| |||||||    
T  4363680 atagcttatgaaaataggttatagcttatatgaaaacagtttgacattatttaatct-tttgttata-aaatagagtatacataagcacttatatga 4363774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 88 - 160
Target Start/End: Complemental strand, 8130481 - 8130409
Alignment:
Q  88 cttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttat 160  Q
    |||||||||||||| |||| |  ||||||||| |||||| ||||||| |||| ||||||| ||||||||||||    
T  8130481 cttgtttccataagttttccatgatagcttatgaaaacaacttatagcttatgtgaaaacagtttgactttat 8130409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 111 - 167
Target Start/End: Original strand, 48830124 - 48830180
Alignment:
Q  111 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 167  Q
    ||||||||| ||||||| |||||| |||||||||||  |||||||||||||||||||    
T  48830124 atagcttatgaaaacagtttatagcttatatgaaaatagtttgactttattttatct 48830180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 105
Target Start/End: Complemental strand, 4868510 - 4868428
Alignment:
Q  22 cacttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagcttt 105  Q
    ||||||||||  |||||| ||||||||||| ||||||||||||   ||||||||||||||||| | ||| ||| ||||||||||    
T  4868510 cacttgtgagactgtttgagagagtttatg-aaacaacttatgacatgtcaataagttgttttcaacttatttacataagcttt 4868428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 167
Target Start/End: Original strand, 12477292 - 12477391
Alignment:
Q  68 tgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 167  Q
    |||| |||||||||||| | ||| ||||||||  || || |  |||||||||||||| ||| ||||  ||| |||||||| |||||||||||||||||||    
T  12477292 tgtccataagttgttttcagcttatttccatacactctccatgatagcttattaaaaaagcatatatcttacatgaaaacagtttgactttattttatct 12477391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 128 - 183
Target Start/End: Complemental strand, 15360899 - 15360845
Alignment:
Q  128 cttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaata 183  Q
    ||||||| |||||||||||| ||||||||||||||||||| ||| |||||||||||    
T  15360899 cttatagcttatatgaaaacagtttgactttattttatct-tttgttatagaaata 15360845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 76 - 207
Target Start/End: Complemental strand, 17269307 - 17269177
Alignment:
Q  76 agttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctctttttta 175  Q
    ||||||||| | ||| || || |||||| || || ||||||||| |||||| ||||| | ||||||||||||  ||||||||||||||  || ||| ||     
T  17269307 agttgtttttaacttattaccgtaagctctccaggatagcttatgaaaacaacttattgcttatatgaaaacaatttgactttattttcact-tttgttc 17269209  T
Q  176 tagaaatagattatatataagcacatatatga 207  Q
    ||||||||  ||||| |||||||| |||||||    
T  17269208 tagaaataacttatacataagcacttatatga 17269177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 76 - 167
Target Start/End: Complemental strand, 25479638 - 25479547
Alignment:
Q  76 agttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 167  Q
    ||||||||| | ||| ||| |||||||| ||||| ||||||||| |||||| |||||||  |||||||| ||  |||||| |||||||||||    
T  25479638 agttgttttcagcttattttcataagctctctaggatagcttatgaaaacaacttatagcctatatgaagacaatttgacgttattttatct 25479547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 79 - 190
Target Start/End: Original strand, 33723398 - 33723508
Alignment:
Q  79 tgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatag 178  Q
    |||||| | ||| ||||||||||||||  ||  |||||||| ||||||| | |||||||||||||||||  ||||||||||| |||| |  || ||||||    
T  33723398 tgttttcagcttatttccataagctttacagggtagcttatgaaaacagttcatagtttatatgaaaacaatttgactttatgttat-tgattcttatag 33723496  T
Q  179 aaatagattata 190  Q
    |||||| |||||    
T  33723497 aaatagcttata 33723508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 121 - 199
Target Start/End: Original strand, 5941505 - 5941582
Alignment:
Q  121 aaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcac 199  Q
    ||||| ||| ||||||||||||||||| ||||||||||||||||||  | | ||||  |||||| ||||||||||||||    
T  5941505 aaaacggctcatagtttatatgaaaacagtttgactttattttatc-atctgttatcaaaatagcttatatataagcac 5941582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 68 - 166
Target Start/End: Complemental strand, 21012855 - 21012757
Alignment:
Q  68 tgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatc 166  Q
    |||| ||||| |||||| | ||||||| | |||||||||||| ||| ||||| |||||| |||||||  || |||||||| | | ||||||||||||||    
T  21012855 tgtcgataagatgttttcagcttgttttcgtaagctttctaggataacttatcaaaacatcttatagcataaatgaaaacagatcgactttattttatc 21012757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 68 - 167
Target Start/End: Complemental strand, 35017641 - 35017540
Alignment:
Q  68 tgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaac--ggtttgactttattttat 165  Q
    |||| ||||||| |||| | ||| |||||||||||| || || | ||||||| |||||||| ||||| ||||| ||||||   |||||||||||||||||    
T  35017641 tgtccataagttattttcaacttatttccataagctctccaggacagcttatgaaaacagcatatagattatacgaaaacagtgtttgactttattttat 35017542  T
Q  166 ct 167  Q
    ||    
T  35017541 ct 35017540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 96 - 166
Target Start/End: Complemental strand, 44422736 - 44422666
Alignment:
Q  96 cataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatc 166  Q
    |||||||| || || ||||||||| |||| ||||||||| |||||||||||| ||||||  ||||||||||    
T  44422736 cataagctctccaggatagcttataaaaatagcttatagcttatatgaaaacagtttgagattattttatc 44422666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 207
Target Start/End: Complemental strand, 48282118 - 48282060
Alignment:
Q  149 gtttgactttattttatctcttttttatagaaatagattatatataagcacatatatga 207  Q
    ||||||||||||||||||| | |||||||||||||| || || |||||||| |||||||    
T  48282118 gtttgactttattttatctttcttttatagaaatagcttttacataagcacttatatga 48282060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 123 - 200
Target Start/End: Original strand, 3319992 - 3320069
Alignment:
Q  123 aacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcaca 200  Q
    |||| |||||||||||||||||| | |||  |||||||||||||| ||||||||| ||||   ||||| |||||||||    
T  3319992 aacaacttatagtttatatgaaaccagttctactttattttatcttttttttatataaatttcttatacataagcaca 3320069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 110 - 167
Target Start/End: Original strand, 15565879 - 15565936
Alignment:
Q  110 catagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 167  Q
    |||||||||  ||||||||||||||||||||  ||||  |||||||||||||||||||    
T  15565879 catagcttaagaaaacagcttatagtttatacaaaaatagtttgactttattttatct 15565936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 111 - 184
Target Start/End: Original strand, 17631149 - 17631221
Alignment:
Q  111 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatag 184  Q
    ||||||||| | ||||||| | |||||| |||||||| ||| ||||||||||||||| ||| ||||||||||||    
T  17631149 atagcttatgagaacagctcaaagtttacatgaaaacagttagactttattttatct-tttgttatagaaatag 17631221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 111 - 164
Target Start/End: Original strand, 25006082 - 25006135
Alignment:
Q  111 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttatttta 164  Q
    ||||||||| |||||| ||||||| ||||||||||||  |||||||||||||||    
T  25006082 atagcttatgaaaacaacttatagcttatatgaaaacaatttgactttatttta 25006135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 36 - 133
Target Start/End: Complemental strand, 27140575 - 27140478
Alignment:
Q  36 tttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttata 133  Q
    |||| ||||||||| ||||||| ||||||   |||| |||||||||||| | ||| ||| |||||||| || |  ||||||||| |||||||||||||    
T  27140575 tttgagagagtttaaggaaacagcttatgacatgtccataagttgttttcagcttatttgcataagctctccatgatagcttataaaaacagcttata 27140478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 94 - 167
Target Start/End: Original strand, 27738211 - 27738284
Alignment:
Q  94 tccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 167  Q
    |||||||||| ||  | ||||||||| ||||||  |||||| ||||||||||||  ||||||||||||||||||    
T  27738211 tccataagctctcctgtatagcttatgaaaacaaattatagcttatatgaaaacaatttgactttattttatct 27738284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 168
Target Start/End: Complemental strand, 6279464 - 6279364
Alignment:
Q  68 tgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 167  Q
    |||| |||||||||||| | | | |||||||||||| ||||| ||||||||| |||| || ||| || ||||| ||||||  ||||  ||||||||||||    
T  6279464 tgtccataagttgttttcagcgtatttccataagctctctaggatagcttatgaaaatagtttaaagcttatacgaaaacaatttgtttttattttatct 6279365  T
Q  168 c 168  Q
    |    
T  6279364 c 6279364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 204
Target Start/End: Complemental strand, 6981557 - 6981422
Alignment:
Q  68 tgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 167  Q
    ||||||||||||||||| | | | ||||||||| || || || ||||||||  ||| ||||||||| ||||||| |||    ||||||||| |||||| |    
T  6981557 tgtcaataagttgttttcagcatatttccataaactctccagaatagcttaggaaatcagcttataatttatatcaaacaaatttgactttgttttat-t 6981459  T
Q  168 cttttttatagaaatagattatatataagcacatata 204  Q
     ||| |||||||||||  |||||||||| ||| ||||    
T  6981458 ttttgttatagaaataatttatatataaacacttata 6981422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 195
Target Start/End: Original strand, 17422986 - 17423070
Alignment:
Q  111 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataa 195  Q
    ||||| ||| |||||| ||||||| |||||||||| | | ||||||||||||||||  ||| ||||||||| || ||||| ||||    
T  17422986 atagcatatgaaaacaacttatagcttatatgaaatcagcttgactttattttatcgttttgttatagaaaaagcttatacataa 17423070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 37272639 - 37272687
Alignment:
Q  116 ttattaaaacagcttatagtttatatgaaaacggtttgactttatttta 164  Q
    |||| |||||||||||||| |||||||||||| | ||||||||||||||    
T  37272639 ttatgaaaacagcttatagcttatatgaaaacagattgactttatttta 37272687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 207
Target Start/End: Complemental strand, 45107619 - 45107550
Alignment:
Q  136 ttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatga 207  Q
    |||||||||||  ||||||||||||||||| |  || |||||||||||| ||||| |||||||| |||||||    
T  45107619 ttatatgaaaatagtttgactttattttattt--ttcttatagaaatagcttatagataagcacttatatga 45107550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 206
Target Start/End: Original strand, 46499941 - 46499996
Alignment:
Q  150 tttgactttattttatctcttttttatagaaatagattatatataagcacatatatg 206  Q
    |||||||||||||||||| ||| |||||||||||| ||||| |||||||| ||||||    
T  46499941 tttgactttattttatct-tttcttatagaaatagcttatagataagcacttatatg 46499996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 136 - 199
Target Start/End: Original strand, 781192 - 781255
Alignment:
Q  136 ttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcac 199  Q
    |||||||||||| |||| ||||||||||| || ||| ||||||||||   ||||||||||||||    
T  781192 ttatatgaaaacagtttcactttattttacctttttattatagaaattatttatatataagcac 781255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 131 - 166
Target Start/End: Complemental strand, 4215374 - 4215339
Alignment:
Q  131 atagtttatatgaaaacggtttgactttattttatc 166  Q
    ||||||||||||||||| ||||||||||||||||||    
T  4215374 atagtttatatgaaaacagtttgactttattttatc 4215339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 112 - 175
Target Start/End: Original strand, 5592734 - 5592797
Alignment:
Q  112 tagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctctttttta 175  Q
    |||||||| |||||| ||||||| |||||||| |||  || ||||||||||||||| |||||||    
T  5592734 tagcttatgaaaacaacttatagcttatatgacaacaattcgactttattttatctttttttta 5592797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 115 - 202
Target Start/End: Complemental strand, 6265112 - 6265026
Alignment:
Q  115 cttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacata 202  Q
    ||||| ||||| |||||||||| || | |||||  |||||||||||||||| | ||| |||||||| ||| ||||||| |||||||||    
T  6265112 cttatgaaaacggcttatagttaatgtaaaaacaatttgactttattttat-tttttgttatagaagtagcttatataaaagcacata 6265026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 111 - 166
Target Start/End: Original strand, 10581125 - 10581180
Alignment:
Q  111 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatc 166  Q
    ||||||||| |||||| ||||||| ||| |||||||  ||||||||||||||||||    
T  10581125 atagcttatgaaaacaacttatagcttaaatgaaaaaagtttgactttattttatc 10581180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 121 - 184
Target Start/End: Complemental strand, 17628611 - 17628549
Alignment:
Q  121 aaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatag 184  Q
    ||||||||||||| |||||||||||||  |||||||||| ||||||| |||  |||||||||||    
T  17628611 aaaacagcttataatttatatgaaaacaatttgactttactttatct-tttaatatagaaatag 17628549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 111 - 162
Target Start/End: Original strand, 19462814 - 19462865
Alignment:
Q  111 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattt 162  Q
    ||||||||| ||||||  ||| ||||||||||||||| ||||||||||||||    
T  19462814 atagcttatgaaaacaatttacagtttatatgaaaactgtttgactttattt 19462865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 111 - 197
Target Start/End: Original strand, 23544687 - 23544773
Alignment:
Q  111 atagcttattaaaacagctta-tagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagc 197  Q
    ||||||||| ||||||| ||| ||| ||||||||||||  |||||||| ||||||||| ||||  |||||||||| ||||| ||||||    
T  23544687 atagcttatgaaaacagtttaatagcttatatgaaaacaatttgacttaattttatct-ttttccatagaaatagcttatacataagc 23544773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 167
Target Start/End: Original strand, 28467337 - 28467411
Alignment:
Q  92 tttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 167  Q
    |||| ||||||| |||||| |||||||| |||||| ||| ||| |||||||||||   ||||||||||||||||||    
T  28467337 tttcaataagctctctagc-tagcttatgaaaacaacttgtagcttatatgaaaataatttgactttattttatct 28467411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 73 - 172
Target Start/End: Complemental strand, 30257743 - 30257644
Alignment:
Q  73 ataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctctttt 172  Q
    ||||| |||||| | ||| |||| ||||||  || || |||| |||| |||||| |||| || ||||||| |||| ||||||||||||||||||| ||||    
T  30257743 ataagctgttttcagcttatttctataagccctccaggatagtttatgaaaacaacttaaagcttatatggaaacagtttgactttattttatctttttt 30257644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 72 - 167
Target Start/End: Original strand, 34179881 - 34179976
Alignment:
Q  72 aataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 167  Q
    ||||||||||||| | | | ||||||||| ||||  || |||| |||| ||||||| |||||| ||| || |||||  ||||||||||||||||||    
T  34179881 aataagttgttttcagcgtatttccataaacttttcaggatagtttatgaaaacagtttatagcttagattaaaacaatttgactttattttatct 34179976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 95 - 226
Target Start/End: Original strand, 40304087 - 40304216
Alignment:
Q  95 ccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatata 194  Q
    |||||| || ||||| |||| |||| |||||||||||||  ||||||||||||  | ||| |||||||||||| ||| ||||| |||||| |||||  ||    
T  40304087 ccataaactatctaggatag-ttatgaaaacagcttataacttatatgaaaacaatgtgattttattttatct-tttgttatataaatagcttataccta 40304184  T
Q  195 agcacatatatgagaaacacttatcctataag 226  Q
    ||||   |||||| |||||||||  |||||||    
T  40304185 agcaataatatgataaacacttacactataag 40304216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 139 - 213
Target Start/End: Original strand, 48748659 - 48748731
Alignment:
Q  139 tatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaaaca 213  Q
    |||||||||  ||| ||||||||| ||||  ||| ||||||||||| ||||| |||||||||||||||| |||||    
T  48748659 tatgaaaacaatttaactttatttcatct--tttgtatagaaatagcttatacataagcacatatatgataaaca 48748731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 205
Target Start/End: Complemental strand, 4548743 - 4548649
Alignment:
Q  111 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatat 205  Q
    ||||||||| ||||||||||||   || ||| ||||| ||||||||||||||||||| ||| ||| | ||||||  |||| || ||||| |||||    
T  4548743 atagcttatgaaaacagcttatgacttgtataaaaacagtttgactttattttatctttttgttacaaaaatagtctatacatgagcacttatat 4548649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 112 - 190
Target Start/End: Original strand, 5756735 - 5756812
Alignment:
Q  112 tagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattata 190  Q
    |||||||  |||||| |||||| ||||||||||||| |||| ||||||| | |||| ||| |||||||||||| |||||    
T  5756735 tagcttacgaaaacaacttataatttatatgaaaacagtttaactttatatcatct-tttgttatagaaatagcttata 5756812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 167
Target Start/End: Complemental strand, 15515633 - 15515507
Alignment:
Q  41 gagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttata 140  Q
    ||||||||||| ||||||||||||   |||||||| | | |||| |  || |||||||||||| || |  ||| ||||| |||||| ||||||| |||||    
T  15515633 gagagtttatgaaaacaacttatgacatgtcaatacgctattttcaatttatttccataagctatccatgataacttatgaaaacaacttatagcttata 15515534  T
Q  141 tgaaaacggtttgactttattttatct 167  Q
     ||||||  ||||| |||||| |||||    
T  15515533 cgaaaacattttgattttattctatct 15515507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 167
Target Start/End: Complemental strand, 16322909 - 16322815
Alignment:
Q  73 ataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 167  Q
    |||||||||||| | ||| |||||||||||| |  |  ||||| ||| |||||||||||||  || ||||||||  |||||||| ||||||||||    
T  16322909 ataagttgtttttagcttatttccataagctcttcaaaatagcctatgaaaacagcttataacttctatgaaaatagtttgactatattttatct 16322815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 147
Target Start/End: Original strand, 25005815 - 25005881
Alignment:
Q  81 ttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaac 147  Q
    |||||| |||||||  ||||||| || || ||||||||| |||||| ||||||| ||||||||||||    
T  25005815 ttttaagcttgtttttataagctctccaggatagcttatgaaaacaacttatagcttatatgaaaac 25005881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 190
Target Start/End: Original strand, 28689440 - 28689580
Alignment:
Q  51 ggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagct--tattaaaacagcttatagtttatatgaaaacg 148  Q
    ||||||| ||||||   |||| |||||||||||| | ||| ||| ||||||||||| |  ||||||  ||| |||||| ||||||| ||||||||||||     
T  28689440 ggaaacagcttatgacatgtccataagttgttttcagcttattttcataagctttccaagatagcttatatgaaaacaacttatagcttatatgaaaacc 28689539  T
Q  149 gtttgactttattttatctcttttttatagaaatagattata 190  Q
      |||  |||||||||||| |||  ||||||||||| |||||    
T  28689540 acttgcatttattttatct-tttgatatagaaatagtttata 28689580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 115 - 157
Target Start/End: Original strand, 29415642 - 29415684
Alignment:
Q  115 cttattaaaacagcttatagtttatatgaaaacggtttgactt 157  Q
    ||||| |||||||||||||||||| || |||||||||||||||    
T  29415642 cttatgaaaacagcttatagtttacataaaaacggtttgactt 29415684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 199
Target Start/End: Original strand, 45999354 - 45999423
Alignment:
Q  129 ttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcac 199  Q
    |||||| |||||||||| | |||||||||||| |||||| ||| |||||||||||| ||||| || |||||    
T  45999354 ttatagcttatatgaaagcagtttgactttatcttatct-tttgttatagaaatagcttatacatgagcac 45999423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 184
Target Start/End: Complemental strand, 3924710 - 3924574
Alignment:
Q  47 ttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaa 146  Q
    ||||| |||||| ||||| | |||  ||||||||||||   ||| ||||||||| || |  || ||||||||| |||||| || |||| ||||| |||||    
T  3924710 ttatgaaaacaatttatgaaatgtttataagttgttttcggcttatttccataaactcttcaggatagcttataaaaacaactaatagattatacgaaaa 3924611  T
Q  147 cggtttgactttattttatctcttttttatagaaatag 184  Q
    | ||||| ||| ||||||||| | | ||||||||||||    
T  3924610 cagtttgccttgattttatct-tgtgttatagaaatag 3924574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 145
Target Start/End: Complemental strand, 6659579 - 6659502
Alignment:
Q  68 tgtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaa 145  Q
    |||| |||||||||||| | ||| |||| ||||||| ||| |  |||||||| |||||| ||||||| ||||||||||    
T  6659579 tgtccataagttgttttcagcttatttcgataagctctcttggttagcttatgaaaacatcttatagcttatatgaaa 6659502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 182
Target Start/End: Original strand, 12564505 - 12564616
Alignment:
Q  69 gtcaataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctc 168  Q
    |||||||||||||||| | ||| |||||||||| | || |  ||||||||| |||||| | ||||  || |||| ||||||||||||||||  ||||||     
T  12564505 gtcaataagttgttttcagcttatttccataagttctccaagatagcttatgaaaacaacctataccttgtatg-aaacggtttgactttaggttatct- 12564602  T
Q  169 ttttttatagaaat 182  Q
    ||| ||||||||||    
T  12564603 tttgttatagaaat 12564616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 146
Target Start/End: Original strand, 23902077 - 23902150
Alignment:
Q  73 ataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaaa 146  Q
    |||||||||||| | |||  ||||||||||| ||||  ||||||| | |||||| ||||||| |||||||||||    
T  23902077 ataagttgttttcagcttacttccataagctctctaagatagcttttgaaaacaacttatagcttatatgaaaa 23902150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 227
Target Start/End: Original strand, 29666367 - 29666473
Alignment:
Q  121 aaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatata--taagcacatatatgagaaacacttat 218  Q
    |||||||||||||||||||||||||||  | | |||||||||||||| ||| |||| |||||||  ||||||  |||||||| || ||| |||| | |||    
T  29666367 aaaacagcttatagtttatatgaaaacaatat-actttattttatct-tttgttattgaaatagcgtatatatttaagcacaaatgtgataaacgcatat 29666464  T
Q  219 cctataagc 227  Q
     ||||||||    
T  29666465 gctataagc 29666473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 228
Target Start/End: Original strand, 29793991 - 29794086
Alignment:
Q  131 atagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaaacacttatcctataagcg 228  Q
    |||| |||| |||||||  |||||||| ||||||||| ||| ||| | ||||||  |||| |||| ||||||||||| |||||||||| |||||||||    
T  29793991 atagcttatttgaaaacaatttgactt-attttatct-tttgttacaaaaatagcctatacataaacacatatatgaaaaacacttatgctataagcg 29794086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 167
Target Start/End: Complemental strand, 47877129 - 47877088
Alignment:
Q  126 agcttatagtttatatgaaaacggtttgactttattttatct 167  Q
    ||||||||||||||||||||||  ||||| ||||||||||||    
T  47877129 agcttatagtttatatgaaaacaatttgattttattttatct 47877088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 133
Target Start/End: Original strand, 51929804 - 51929845
Alignment:
Q  92 tttccataagctttctagcatagcttattaaaacagcttata 133  Q
    |||||||||||| ||||| ||||||||| |||||||||||||    
T  51929804 tttccataagctctctagaatagcttatgaaaacagcttata 51929845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 167
Target Start/End: Original strand, 10586420 - 10586476
Alignment:
Q  111 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 167  Q
    ||||||||| ||||  |||||||||| ||||||||||  ||| ||||||||||||||    
T  10586420 atagcttatgaaaatggcttatagttcatatgaaaacaattttactttattttatct 10586476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 115 - 195
Target Start/End: Complemental strand, 21516391 - 21516312
Alignment:
Q  115 cttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataa 195  Q
    ||||| |||| | ||| ||||||||||||||||  |||||||| ||||||||| ||| ||||| |||||| ||||| ||||    
T  21516391 cttatgaaaataacttctagtttatatgaaaactatttgacttcattttatct-tttcttataaaaatagtttataaataa 21516312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 130 - 166
Target Start/End: Original strand, 28788605 - 28788641
Alignment:
Q  130 tatagtttatatgaaaacggtttgactttattttatc 166  Q
    ||||| |||||||||||| ||||||||||||||||||    
T  28788605 tatagcttatatgaaaacagtttgactttattttatc 28788641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 115 - 167
Target Start/End: Complemental strand, 30371166 - 30371114
Alignment:
Q  115 cttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 167  Q
    ||||| |||||| ||||||| ||||||||||||  ||||| ||||||||||||    
T  30371166 cttatgaaaacaacttatagcttatatgaaaacaatttgagtttattttatct 30371114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 196
Target Start/End: Original strand, 35080143 - 35080202
Alignment:
Q  136 ttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataag 196  Q
    ||||||| |||| ||||||||||||||||| | ||| |||||||||| | |||||||||||    
T  35080143 ttatatggaaacagtttgactttattttat-tttttgttatagaaattgcttatatataag 35080202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 167
Target Start/End: Complemental strand, 45205090 - 45205034
Alignment:
Q  111 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatct 167  Q
    ||||||||| |||||| ||| ||| ||||||| |||  |||||||||||||||||||    
T  45205090 atagcttatgaaaacaacttctagcttatatggaaatagtttgactttattttatct 45205034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 199
Target Start/End: Complemental strand, 45804275 - 45804212
Alignment:
Q  135 tttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcac 199  Q
    ||||||||||||  ||||||||||||||||| | ||| |||||||||||  || |||||||||||    
T  45804275 tttatatgaaaatagtttgactttattttat-tatttattatagaaataacttttatataagcac 45804212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0590 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 136 - 207
Target Start/End: Original strand, 1147 - 1217
Alignment:
Q  136 ttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatga 207  Q
    |||||||| ||  ||||||||||||||||||| ||| |||||||||||| ||||| |||||||| |||||||    
T  1147 ttatatgagaatagtttgactttattttatct-tttgttatagaaatagcttatacataagcacttatatga 1217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 111 - 230
Target Start/End: Original strand, 9823 - 9941
Alignment:
Q  111 atagcttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaa 210  Q
    |||| |||| |||||| | ||||  ||||||||||||  |||||||| ||||||| | ||| |||||||||||  ||||| |||||||| ||||||| ||    
T  9823 atagattatgaaaacaacctataacttatatgaaaactttttgacttaattttattt-tttgttatagaaataacttatacataagcacctatatgataa 9921  T
Q  211 acacttatcctataagcgat 230  Q
     || |||| |||||||||||    
T  9922 gcatttattctataagcgat 9941  T

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Target: scaffold0275 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 136 - 207
Target Start/End: Complemental strand, 2828 - 2758
Alignment:
Q  136 ttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatga 207  Q
    |||||||| ||  ||||||||||||||||||| ||| |||||||||||| ||||| |||||||| |||||||    
T  2828 ttatatgagaatagtttgactttattttatct-tttgttatagaaatagcttatacataagcacttatatga 2758  T

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Target: scaffold0053 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 199
Target Start/End: Complemental strand, 20197 - 20114
Alignment:
Q  115 cttattaaaacagcttatagtttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcac 199  Q
    ||||| |||||| || |||| |||||||| ||| ||||||||||||||||||| ||  ||||||||||||  |||| ||||||||    
T  20197 cttatgaaaacaactaatagcttatatgataactgtttgactttattttatct-ttggttatagaaatagtatatacataagcac 20114  T

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Target: scaffold0147 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 133
Target Start/End: Original strand, 12678 - 12775
Alignment:
Q  37 ttgtgagagtttatggaaacaacttatgcattgtcaataagttgttttaatcttgtttccataagctttctagcatagcttatt-aaaacagcttata 133  Q
    ||||||||  ||||||||||||||||||   |||| |||||||||||| | |||   |||||||||| ||||  ||||||| || |||||||||||||    
T  12678 ttgtgagaccttatggaaacaacttatgacatgtccataagttgttttcagcttagctccataagctctctaagatagcttcttgaaaacagcttata 12775  T

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Target: scaffold0584 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0584
Description:

Target: scaffold0584; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 145
Target Start/End: Original strand, 1343 - 1414
Alignment:
Q  73 ataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaa 145  Q
    |||||||||||| ||||| ||| ||||||| ||| || ||||||  |||||| ||||||||| ||||||||||    
T  1343 ataagttgtttttatcttattttcataagc-ttccaggatagctagttaaaatagcttatagcttatatgaaa 1414  T

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Target: scaffold0446 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0446
Description:

Target: scaffold0446; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 145
Target Start/End: Original strand, 5469 - 5540
Alignment:
Q  73 ataagttgttttaatcttgtttccataagctttctagcatagcttattaaaacagcttatagtttatatgaaa 145  Q
    |||||||||||| ||||| ||| ||||||| ||| || ||||||  |||||| ||||||||| ||||||||||    
T  5469 ataagttgtttttatcttattttcataagc-ttccaggatagctagttaaaatagcttatagcttatatgaaa 5540  T

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Target: scaffold0072 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 228
Target Start/End: Complemental strand, 4969 - 4878
Alignment:
Q  136 ttatatgaaaacggtttgactttattttatctcttttttatagaaatagattatatataagcacatatatgagaaacacttatcctataagcg 228  Q
    ||||||| |||| |||||| ||| |||||| | || || |||||||||| ||||||||| |||| ||||||| | ||| |||| |||||||||    
T  4969 ttatatggaaacagtttgaatttgttttatatattatt-atagaaatagcttatatataggcacttatatgatagacatttatgctataagcg 4878  T

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