View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5236-Insertion-4 (Length: 308)
Name: NF5236-Insertion-4
Description: NF5236
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5236-Insertion-4 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 289; Significance: 1e-162; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 8 - 308
Target Start/End: Complemental strand, 36275223 - 36274923
Alignment:
| Q |
8 |
aatttggagtgacgacttttataaatcttactattgactctacaaacaataggcactaatgagaggaggaccagcaacataaggcatgcatcggtttggc |
107 |
Q |
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| T |
36275223 |
aatttggagtgacgacttttataaatcttactattgactctacaaacaataggcactaatgagaggaggaccagcaacataagacatgcatcggtttggc |
36275124 |
T |
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| Q |
108 |
accgtcctgttaccatcacaaagatcactggaaatctgaaaacgatatataataattgcacggatgctcattacctcaaagaaaaagaaaatccaccaaa |
207 |
Q |
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| T |
36275123 |
actgtcctgttaccatcacaaagatcactggaaatctgaaaacgatatataataattgcatggatgctcattacctcaaagaaaaagaaaatccaccaaa |
36275024 |
T |
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| Q |
208 |
ttaccaagagcagcaaatgttaatttattgtttgtattttgtaactaatagaaagcaactgaacaattttaaaagtggaaactaaatcacatatttagcc |
307 |
Q |
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| T |
36275023 |
ttaccaagagcagcaaatgttaatttattgtttgtattttgtaactaatagaaagcaactgaacaattttaaaagtggaaactaaatcacatatttagcc |
36274924 |
T |
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| Q |
308 |
g |
308 |
Q |
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| T |
36274923 |
g |
36274923 |
T |
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