View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5236_high_10 (Length: 308)

Name: NF5236_high_10
Description: NF5236
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5236_high_10
NF5236_high_10
[»] chr1 (21 HSPs)
chr1 (1-296)||(16401716-16401994)
chr1 (116-172)||(44822202-44822258)
chr1 (195-265)||(17901794-17901866)
chr1 (187-265)||(7703093-7703174)
chr1 (127-168)||(22823287-22823328)
chr1 (204-265)||(38056672-38056735)
chr1 (204-265)||(50544861-50544924)
chr1 (187-244)||(6834148-6834206)
chr1 (116-172)||(7052084-7052141)
chr1 (136-177)||(22823259-22823300)
chr1 (199-265)||(8306590-8306658)
chr1 (204-266)||(22145665-22145729)
chr1 (204-262)||(24719514-24719573)
chr1 (116-172)||(24723532-24723588)
chr1 (204-265)||(28476734-28476797)
chr1 (254-296)||(25091388-25091429)
chr1 (198-269)||(20588619-20588694)
chr1 (198-269)||(20593157-20593232)
chr1 (117-153)||(22350594-22350630)
chr1 (199-265)||(34392752-34392820)
chr1 (199-265)||(35895083-35895151)
[»] scaffold0035 (2 HSPs)
scaffold0035 (163-265)||(43787-43889)
scaffold0035 (163-265)||(39095-39197)
[»] scaffold0205 (1 HSPs)
scaffold0205 (163-265)||(5616-5718)
[»] chr5 (12 HSPs)
chr5 (164-265)||(20313226-20313327)
chr5 (116-172)||(30138155-30138211)
chr5 (159-231)||(16063630-16063702)
chr5 (116-172)||(17875981-17876037)
chr5 (204-269)||(23199203-23199270)
chr5 (116-172)||(31456775-31456831)
chr5 (150-227)||(10774818-10774899)
chr5 (204-265)||(18744863-18744926)
chr5 (199-265)||(32607316-32607384)
chr5 (204-265)||(16063740-16063803)
chr5 (116-172)||(36508814-36508871)
chr5 (31-78)||(5450950-5450998)
[»] chr3 (23 HSPs)
chr3 (163-265)||(25202084-25202186)
chr3 (164-265)||(48043478-48043579)
chr3 (17-122)||(17393512-17393615)
chr3 (187-261)||(22841283-22841359)
chr3 (116-171)||(6805000-6805055)
chr3 (116-170)||(24177843-24177897)
chr3 (187-258)||(45803338-45803411)
chr3 (17-78)||(12488833-12488895)
chr3 (134-171)||(13522422-13522459)
chr3 (199-266)||(54875473-54875542)
chr3 (187-265)||(12917306-12917386)
chr3 (1-101)||(14177123-14177223)
chr3 (192-231)||(13520370-13520409)
chr3 (204-265)||(14152399-14152462)
chr3 (204-265)||(14641548-14641611)
chr3 (204-265)||(17208513-17208576)
chr3 (204-265)||(29907628-29907691)
chr3 (204-265)||(29948794-29948857)
chr3 (204-265)||(29997948-29998011)
chr3 (1-78)||(18969983-18970060)
chr3 (199-265)||(3527157-3527225)
chr3 (199-265)||(6156695-6156762)
chr3 (31-78)||(17191633-17191681)
[»] chr2 (18 HSPs)
chr2 (164-265)||(36734451-36734552)
chr2 (116-172)||(1383724-1383780)
chr2 (127-172)||(22501795-22501840)
chr2 (127-172)||(22509729-22509774)
chr2 (116-172)||(24884285-24884341)
chr2 (187-265)||(34491240-34491320)
chr2 (204-265)||(21315476-21315539)
chr2 (204-265)||(21335266-21335329)
chr2 (254-303)||(23149642-23149690)
chr2 (254-303)||(23561432-23561480)
chr2 (136-185)||(25584343-25584391)
chr2 (199-265)||(23801480-23801548)
chr2 (204-265)||(21369282-21369345)
chr2 (204-265)||(23610615-23610678)
chr2 (127-172)||(25584374-25584420)
chr2 (205-265)||(20005971-20006032)
chr2 (136-172)||(357716-357752)
chr2 (117-153)||(18388328-18388364)
[»] chr7 (27 HSPs)
chr7 (1-123)||(15977914-15978034)
chr7 (116-172)||(14274147-14274203)
chr7 (189-265)||(20252182-20252260)
chr7 (205-265)||(38299738-38299800)
chr7 (204-265)||(708429-708492)
chr7 (204-265)||(15575649-15575712)
chr7 (116-172)||(708592-708649)
chr7 (187-265)||(13744510-13744591)
chr7 (199-265)||(58413-58481)
chr7 (215-269)||(43276740-43276796)
chr7 (204-265)||(8488094-8488157)
chr7 (204-265)||(8513753-8513816)
chr7 (1-76)||(13352014-13352089)
chr7 (204-265)||(19195601-19195663)
chr7 (187-269)||(19283026-19283112)
chr7 (160-265)||(33556105-33556210)
chr7 (204-265)||(43745645-43745708)
chr7 (204-265)||(47095441-47095504)
chr7 (1-101)||(18151441-18151538)
chr7 (8-78)||(39291625-39291695)
chr7 (116-172)||(12754736-12754793)
chr7 (202-265)||(16250222-16250287)
chr7 (199-265)||(13315082-13315150)
chr7 (199-269)||(15720763-15720835)
chr7 (31-78)||(16919651-16919699)
chr7 (215-265)||(18874665-18874717)
chr7 (116-152)||(47974983-47975019)
[»] scaffold0086 (3 HSPs)
scaffold0086 (163-261)||(35490-35588)
scaffold0086 (187-261)||(35341-35415)
scaffold0086 (187-265)||(35186-35266)
[»] chr6 (18 HSPs)
chr6 (3-123)||(17374992-17375110)
chr6 (159-230)||(34140556-34140627)
chr6 (159-230)||(34153172-34153243)
chr6 (205-265)||(34140456-34140516)
chr6 (214-265)||(34153072-34153123)
chr6 (116-172)||(18585603-18585659)
chr6 (19-78)||(21931283-21931343)
chr6 (187-265)||(29045243-29045323)
chr6 (204-265)||(21683075-21683138)
chr6 (1-46)||(26506905-26506950)
chr6 (1-46)||(26512204-26512249)
chr6 (1-46)||(26517320-26517365)
chr6 (199-265)||(10446201-10446269)
chr6 (204-269)||(20410508-20410575)
chr6 (204-265)||(23658078-23658141)
chr6 (1-78)||(15005022-15005099)
chr6 (1-78)||(15889822-15889899)
chr6 (31-78)||(22361872-22361920)
[»] chr8 (23 HSPs)
chr8 (204-265)||(21676500-21676561)
chr8 (204-265)||(21676593-21676654)
chr8 (204-265)||(21678846-21678907)
chr8 (136-265)||(22345086-22345216)
chr8 (136-265)||(22356746-22356876)
chr8 (187-261)||(22483758-22483834)
chr8 (116-172)||(20517128-20517184)
chr8 (116-172)||(22345047-22345103)
chr8 (116-172)||(22356707-22356763)
chr8 (204-265)||(22208258-22208321)
chr8 (254-303)||(19989949-19989998)
chr8 (127-171)||(36305777-36305821)
chr8 (204-265)||(18816295-18816358)
chr8 (184-244)||(22483907-22483968)
chr8 (199-265)||(21399701-21399769)
chr8 (199-265)||(21794194-21794262)
chr8 (37-79)||(23226182-23226225)
chr8 (204-265)||(36732412-36732475)
chr8 (29-78)||(21198259-21198309)
chr8 (199-269)||(18834407-18834478)
chr8 (204-266)||(21514680-21514744)
chr8 (187-231)||(36732513-36732557)
chr8 (117-153)||(42265647-42265683)
[»] chr4 (17 HSPs)
chr4 (159-231)||(35660835-35660907)
chr4 (1-45)||(16225308-16225352)
chr4 (215-269)||(12424286-12424342)
chr4 (204-265)||(14631124-14631187)
chr4 (204-265)||(16296927-16296990)
chr4 (204-269)||(33186892-33186959)
chr4 (116-172)||(19434730-19434787)
chr4 (202-265)||(25513838-25513903)
chr4 (127-172)||(45314210-45314254)
chr4 (40-123)||(49071788-49071869)
chr4 (204-265)||(9638999-9639062)
chr4 (205-261)||(26446197-26446255)
chr4 (199-265)||(9622473-9622541)
chr4 (199-265)||(10273367-10273435)
chr4 (127-155)||(14353888-14353916)
chr4 (31-78)||(15044920-15044968)
chr4 (199-265)||(55583180-55583248)
[»] scaffold0009 (1 HSPs)
scaffold0009 (17-79)||(244917-244979)
[»] scaffold0594 (1 HSPs)
scaffold0594 (187-265)||(2219-2299)
[»] scaffold0230 (1 HSPs)
scaffold0230 (116-172)||(6866-6922)
[»] scaffold0026 (2 HSPs)
scaffold0026 (116-172)||(9949-10005)
scaffold0026 (116-172)||(22046-22102)
[»] scaffold0004 (2 HSPs)
scaffold0004 (187-265)||(66072-66152)
scaffold0004 (199-265)||(75921-75989)
[»] scaffold0819 (1 HSPs)
scaffold0819 (150-227)||(5183-5264)
[»] scaffold0676 (1 HSPs)
scaffold0676 (204-265)||(2870-2933)
[»] scaffold0317 (1 HSPs)
scaffold0317 (1-123)||(12668-12785)
[»] scaffold0139 (3 HSPs)
scaffold0139 (127-172)||(40294-40339)
scaffold0139 (136-185)||(40244-40292)
scaffold0139 (136-172)||(40275-40311)
[»] scaffold0853 (1 HSPs)
scaffold0853 (215-269)||(2450-2506)
[»] scaffold0431 (1 HSPs)
scaffold0431 (215-269)||(5633-5689)
[»] scaffold0032 (1 HSPs)
scaffold0032 (1-73)||(116277-116349)
[»] scaffold1186 (1 HSPs)
scaffold1186 (204-265)||(2009-2072)
[»] scaffold0231 (1 HSPs)
scaffold0231 (204-265)||(17521-17584)
[»] scaffold0220 (1 HSPs)
scaffold0220 (204-265)||(13938-14001)
[»] scaffold0056 (1 HSPs)
scaffold0056 (204-265)||(18264-18327)
[»] scaffold0005 (1 HSPs)
scaffold0005 (204-265)||(186196-186259)
[»] scaffold0505 (1 HSPs)
scaffold0505 (204-265)||(4926-4988)
[»] scaffold0061 (2 HSPs)
scaffold0061 (205-265)||(14586-14648)
scaffold0061 (205-265)||(23644-23706)
[»] scaffold0040 (1 HSPs)
scaffold0040 (116-172)||(106232-106289)
[»] scaffold0878 (1 HSPs)
scaffold0878 (204-265)||(3422-3485)
[»] scaffold0247 (1 HSPs)
scaffold0247 (204-265)||(1065-1128)
[»] scaffold0369 (1 HSPs)
scaffold0369 (204-265)||(15616-15678)
[»] scaffold0174 (3 HSPs)
scaffold0174 (187-244)||(11588-11646)
scaffold0174 (206-265)||(5445-5506)
scaffold0174 (199-265)||(19840-19908)
[»] scaffold0013 (1 HSPs)
scaffold0013 (1-78)||(7238-7313)
[»] scaffold0439 (1 HSPs)
scaffold0439 (134-171)||(12182-12219)
[»] scaffold0057 (1 HSPs)
scaffold0057 (1-78)||(5945-6022)
[»] scaffold0017 (1 HSPs)
scaffold0017 (127-156)||(26626-26655)
[»] scaffold0507 (1 HSPs)
scaffold0507 (1-77)||(1618-1694)
[»] scaffold0414 (1 HSPs)
scaffold0414 (199-269)||(11156-11228)
[»] scaffold0379 (1 HSPs)
scaffold0379 (199-265)||(10932-10999)
[»] scaffold0308 (1 HSPs)
scaffold0308 (117-153)||(13318-13354)
[»] scaffold0180 (1 HSPs)
scaffold0180 (117-153)||(28467-28503)
[»] scaffold0149 (1 HSPs)
scaffold0149 (116-152)||(21464-21500)
[»] scaffold0125 (1 HSPs)
scaffold0125 (127-155)||(7314-7342)
[»] scaffold0116 (1 HSPs)
scaffold0116 (117-153)||(35602-35638)
[»] scaffold0063 (1 HSPs)
scaffold0063 (2-74)||(44234-44306)
[»] scaffold0048 (1 HSPs)
scaffold0048 (199-265)||(68726-68794)
[»] scaffold0031 (1 HSPs)
scaffold0031 (199-265)||(127343-127411)


Alignment Details
Target: chr1 (Bit Score: 213; Significance: 1e-117; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 296
Target Start/End: Original strand, 16401716 - 16401994
Alignment:
Q  1 acaaccacaactcataatcatgaatccaaccacaaatcaacaacaacataacataaatcatcatttgagcataattcatcaagtatccaaatatatatat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16401716 acaaccacaactcataatcatgaatccaaccacaaatcaacaacaacataacataaatcatcatttgagcataattcatcaagtatccaaatatatatat 16401815  T
Q  101 --accaagagcatgcaatttcatcaattaaattgcaattcaaaaccctaacttcttttcaaaaccctaacttctctaatcatcaaaataaaataacaaca 198  Q
      ||||||||||||||||||||||||||||||||||||||||||||||                   |||||||||||||||||||||||||||||||||    
T  16401816 acaccaagagcatgcaatttcatcaattaaattgcaattcaaaaccct-------------------aacttctctaatcatcaaaataaaataacaaca 16401896  T
Q  199 aacatgttaaaccctatttcagaattataaacccattattagagaagctagtccgacccttaccttaaattcatacgaacaacgttctacaatctctc 296  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  16401897 aacatgttaaaccctatttcagaattataaacccattattagagaagttagtcccacccttaccttaaattcagacgaacaacgttctacaatctctc 16401994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 116 - 172
Target Start/End: Complemental strand, 44822258 - 44822202
Alignment:
Q  116 tttcatcaattaaattgcaattcaaaaccctaacttcttttcaaaaccctaacttct 172  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  44822258 tttcaacaatcaaattgcaattcaaaaccctaacttcttttcaaaactctaacttct 44822202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 195 - 265
Target Start/End: Complemental strand, 17901866 - 17901794
Alignment:
Q  195 aacaaacatgttaaaccctatttcagaattata-aacccattattagag-aagctagtccgacccttacctta 265  Q
    ||||| ||||||||||||| ||||||||||||| ||||||||||||||| |||||||||  ||||||||||||    
T  17901866 aacaaccatgttaaaccctttttcagaattatacaacccattattagagaaagctagtctcacccttacctta 17901794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 187 - 265
Target Start/End: Original strand, 7703093 - 7703174
Alignment:
Q  187 aaaataacaacaaacatgttaaaccc--tatttcagaattataaacccattattagag-aagctagtccgacccttacctta 265  Q
    |||| |||||||||||||||||||||  | ||||  |||||||||| ||||||||||| |||||||||| ||||||||||||    
T  7703093 aaaacaacaacaaacatgttaaaccctttttttccaaattataaactcattattagagaaagctagtcccacccttacctta 7703174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 168
Target Start/End: Complemental strand, 22823328 - 22823287
Alignment:
Q  127 aaattgcaattcaaaaccctaacttcttttcaaaaccctaac 168  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  22823328 aaattgcaattcaaaaccctatcttcttttcaaaaccctaac 22823287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 204 - 265
Target Start/End: Complemental strand, 38056735 - 38056672
Alignment:
Q  204 gttaaaccctatttcagaattata-aacccattattagag-aagctagtccgacccttacctta 265  Q
    |||||||||| ||||||||||||| ||||||||| ||||| |||||||||| ||||||||||||    
T  38056735 gttaaaccctttttcagaattatacaacccattactagagaaagctagtcccacccttacctta 38056672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 204 - 265
Target Start/End: Original strand, 50544861 - 50544924
Alignment:
Q  204 gttaaaccctatttcagaattata-aacccattattagag-aagctagtccgacccttacctta 265  Q
    |||||||||| ||||||||||||| ||||||||||||||| |||||||||  ||||||||||||    
T  50544861 gttaaaccctttttcagaattatacaacccattattagagaaagctagtctcacccttacctta 50544924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 244
Target Start/End: Original strand, 6834148 - 6834206
Alignment:
Q  187 aaaataacaacaaacatgttaaaccctatttcagaattata-aacccattattagagaa 244  Q
    |||| |||||||| ||||||||||||| ||||||||||||| ||| |||||||||||||    
T  6834148 aaaacaacaacaaccatgttaaaccctttttcagaattatacaactcattattagagaa 6834206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 116 - 172
Target Start/End: Complemental strand, 7052141 - 7052084
Alignment:
Q  116 tttcatcaattaaattgcaattcaaaa-ccctaacttcttttcaaaaccctaacttct 172  Q
    ||||| |||| |||||||||||||||| |||||||||||||| ||||| |||||||||    
T  7052141 tttcaacaatcaaattgcaattcaaaaaccctaacttctttttaaaactctaacttct 7052084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 177
Target Start/End: Complemental strand, 22823300 - 22823259
Alignment:
Q  136 ttcaaaaccctaacttcttttcaaaaccctaacttctctaat 177  Q
    |||||||||||||| |||||||||||||||||||||| ||||    
T  22823300 ttcaaaaccctaacctcttttcaaaaccctaacttctataat 22823259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 265
Target Start/End: Original strand, 8306590 - 8306658
Alignment:
Q  199 aacatgttaaaccctatttcagaattata-aacccattattagag-aagctagtccgacccttacctta 265  Q
    ||||||||||||||  ||| ||||||||| ||||||||||||||| |||||||||| || |||||||||    
T  8306590 aacatgttaaacccctttttagaattatacaacccattattagagaaagctagtcccactcttacctta 8306658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 266
Target Start/End: Complemental strand, 22145729 - 22145665
Alignment:
Q  204 gttaaaccctatttcagaattata-aacccattattagag-aagctagtccgacccttaccttaa 266  Q
    |||||||||| ||||||||||| | ||||||||||||||| ||| |||||| |||||||||||||    
T  22145729 gttaaaccctttttcagaattaaacaacccattattagagaaagttagtcccacccttaccttaa 22145665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 262
Target Start/End: Complemental strand, 24719573 - 24719514
Alignment:
Q  204 gttaaaccctatttcagaattata-aacccattattagag-aagctagtccgacccttacc 262  Q
    |||||||||| ||||||||||||| ||||||||||||||| |||||||||| |||||||||    
T  24719573 gttaaaccctttttcagaattatacaacccattattagagaaagctagtcc-acccttacc 24719514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 172
Target Start/End: Complemental strand, 24723588 - 24723532
Alignment:
Q  116 tttcatcaattaaattgcaattcaaaaccctaacttcttttcaaaaccctaacttct 172  Q
    ||||| |||| ||||||||||| |||||| ||||||||||| ||||| |||||||||    
T  24723588 tttcaacaatcaaattgcaattaaaaaccataacttctttttaaaactctaacttct 24723532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 204 - 265
Target Start/End: Complemental strand, 28476797 - 28476734
Alignment:
Q  204 gttaaaccctatttcagaattata-aacccattattagag-aagctagtccgacccttacctta 265  Q
    |||||||||| ||||||||||||| ||| ||||||||||| || ||||||| ||||||||||||    
T  28476797 gttaaaccctttttcagaattatacaactcattattagagaaatctagtcccacccttacctta 28476734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 296
Target Start/End: Complemental strand, 25091429 - 25091388
Alignment:
Q  254 acccttaccttaaattcatacgaacaacgttctacaatctctc 296  Q
    ||||||||||||| |||| ||||||||||||||||||||||||    
T  25091429 acccttaccttaa-ttcagacgaacaacgttctacaatctctc 25091388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 269
Target Start/End: Original strand, 20588619 - 20588694
Alignment:
Q  198 aaacatgttaaaccctatttc--agaattata-aacccattattagagaa-gctagtccgacccttaccttaaatt 269  Q
    |||||||||||||||| |||   ||||| ||| ||||||||||||||||| |||| ||| ||||||||||||||||    
T  20588619 aaacatgttaaacccttttttttagaatcatacaacccattattagagaaagctaatcccacccttaccttaaatt 20588694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 269
Target Start/End: Original strand, 20593157 - 20593232
Alignment:
Q  198 aaacatgttaaaccctatttc--agaattata-aacccattattagagaa-gctagtccgacccttaccttaaatt 269  Q
    |||||||||||||||| |||   ||||| ||| ||||||||||||||||| |||| ||| ||||||||||||||||    
T  20593157 aaacatgttaaacccttttttttagaatcatacaacccattattagagaaagctaatcccacccttaccttaaatt 20593232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 153
Target Start/End: Original strand, 22350594 - 22350630
Alignment:
Q  117 ttcatcaattaaattgcaattcaaaaccctaacttct 153  Q
    |||| |||| |||||||||||||||||||||||||||    
T  22350594 ttcaacaatcaaattgcaattcaaaaccctaacttct 22350630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 265
Target Start/End: Original strand, 34392752 - 34392820
Alignment:
Q  199 aacatgttaaaccctatttcagaattata-aacccattattagag-aagctagtccgacccttacctta 265  Q
    ||||||||||||||  ||| ||||| ||| ||||||||||||||| |||||||||  ||||||||||||    
T  34392752 aacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcacacccttacctta 34392820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 265
Target Start/End: Original strand, 35895083 - 35895151
Alignment:
Q  199 aacatgttaaaccctatttcagaattata-aacccattattaga-gaagctagtccgacccttacctta 265  Q
    ||||||||||| ||| ||||||||| ||| ||||||||||||||  |||||||||| |||| |||||||    
T  35895083 aacatgttaaaacctttttcagaatcatacaacccattattagataaagctagtcctacccatacctta 35895151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 83; Significance: 2e-39; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 163 - 265
Target Start/End: Complemental strand, 43889 - 43787
Alignment:
Q  163 cctaacttctctaatcatcaaaataaaataacaacaaacatgttaaaccctatttcagaattataaacccattattagagaagctagtccgacccttacc 262  Q
    ||||| ||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  43889 cctaatttctctaatcatcaaaatctaataacaacaaccatgttaaaccctatttcagaattataaacccattattagagaagctagtcccacccttacc 43790  T
Q  263 tta 265  Q
    |||    
T  43789 tta 43787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 163 - 265
Target Start/End: Complemental strand, 39197 - 39095
Alignment:
Q  163 cctaacttctctaatcatcaaaataaaataacaacaaacatgttaaaccctatttcagaattataaacccattattagagaagctagtccgacccttacc 262  Q
    ||||| ||||||||  |||||||| ||| |||||||| ||||||| ||| ||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  39197 cctaatttctctaaagatcaaaatcaaacaacaacaaccatgttacaccgtatttcataattataaacccattattagagaagctagtcccacccttacc 39098  T
Q  263 tta 265  Q
    |||    
T  39097 tta 39095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 79; Significance: 6e-37; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 163 - 265
Target Start/End: Complemental strand, 5718 - 5616
Alignment:
Q  163 cctaacttctctaatcatcaaaataaaataacaacaaacatgttaaaccctatttcagaattataaacccattattagagaagctagtccgacccttacc 262  Q
    ||||| |||||||||||||||||| ||| |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  5718 cctaatttctctaatcatcaaaatcaaacaacaacaaccatgttaaatcctatttcagaattataaacccattattagagaagctagtcccacccttacc 5619  T
Q  263 tta 265  Q
    |||    
T  5618 tta 5616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 78; Significance: 2e-36; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 164 - 265
Target Start/End: Original strand, 20313226 - 20313327
Alignment:
Q  164 ctaacttctctaatcatcaaaataaaataacaacaaacatgttaaaccctatttcagaattataaacccattattagagaagctagtccgacccttacct 263  Q
    |||| |||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  20313226 ctaatttctctaatcatcaaaatcaaacaacaacaaccatgttaaaccctatttcagaattataaacccactattagagaagctagtcccacccttacct 20313325  T
Q  264 ta 265  Q
    ||    
T  20313326 ta 20313327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 116 - 172
Target Start/End: Complemental strand, 30138211 - 30138155
Alignment:
Q  116 tttcatcaattaaattgcaattcaaaaccctaacttcttttcaaaaccctaacttct 172  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  30138211 tttcaacaatcaaattgcaattcaaaaccctaacttcttttcaaaactctaacttct 30138155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 159 - 231
Target Start/End: Original strand, 16063630 - 16063702
Alignment:
Q  159 aaaccctaacttctctaatcatcaaaataaaataacaacaaacatgttaaaccctatttcagaattataaacc 231  Q
    ||||||||| |||||||||||||||||| ||| ||||| || || ||||||| ||||| ||||||||||||||    
T  16063630 aaaccctaatttctctaatcatcaaaatcaaacaacaaaaaccacgttaaactctattccagaattataaacc 16063702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 116 - 172
Target Start/End: Original strand, 17875981 - 17876037
Alignment:
Q  116 tttcatcaattaaattgcaattcaaaaccctaacttcttttcaaaaccctaacttct 172  Q
    ||||| |||| ||||||||||||||||||||||||||| |||||||| |||||||||    
T  17875981 tttcaacaatcaaattgcaattcaaaaccctaacttctcttcaaaactctaacttct 17876037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 204 - 269
Target Start/End: Complemental strand, 23199270 - 23199203
Alignment:
Q  204 gttaaaccctatttcagaattata-aacccattattagagaa-gctagtccgacccttaccttaaatt 269  Q
    |||||||| | ||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||    
T  23199270 gttaaaccatttttcagaattatacaacccattattagagaaagctagtcccacccttaccttaaatt 23199203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 116 - 172
Target Start/End: Original strand, 31456775 - 31456831
Alignment:
Q  116 tttcatcaattaaattgcaattcaaaaccctaacttcttttcaaaaccctaacttct 172  Q
    ||||| |||| ||||||||||||||| | |||||||||||||||||| |||||||||    
T  31456775 tttcaacaatcaaattgcaattcaaagctctaacttcttttcaaaactctaacttct 31456831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 150 - 227
Target Start/End: Complemental strand, 10774899 - 10774818
Alignment:
Q  150 ttcttttcaaaa-ccctaacttctctaatcatcaaaat---aaaataacaacaaacatgttaaaccctatttcagaattata 227  Q
    |||||||||||| ||||||||||| |||||||||||||   | || |||||||| ||||||||||||| ||| |||||||||    
T  10774899 ttcttttcaaaaaccctaacttctttaatcatcaaaatcaaacaacaacaacaaccatgttaaaccctgttttagaattata 10774818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 204 - 265
Target Start/End: Original strand, 18744863 - 18744926
Alignment:
Q  204 gttaaaccctatttcagaattata-aacccattattagag-aagctagtccgacccttacctta 265  Q
    |||||||||| ||||||||||||| ||||||||||||||| ||| |||||| ||||||||||||    
T  18744863 gttaaaccctttttcagaattatacaacccattattagagaaagttagtcccacccttacctta 18744926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 265
Target Start/End: Complemental strand, 32607384 - 32607316
Alignment:
Q  199 aacatgttaaaccctatttcagaattata-aacccattattagagaa-gctagtccgacccttacctta 265  Q
    ||||||||||||||  ||| ||||| ||| ||||||||||||||||| |||||||| ||||||||||||    
T  32607384 aacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttacctta 32607316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 204 - 265
Target Start/End: Original strand, 16063740 - 16063803
Alignment:
Q  204 gttaaaccctatttcagaattata-aacccattattagag-aagctagtccgacccttacctta 265  Q
    |||||||||| ||| ||||||||| ||||||||||||||| ||| |||||| ||||||||||||    
T  16063740 gttaaacccttttttagaattatacaacccattattagagaaaggtagtcccacccttacctta 16063803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 172
Target Start/End: Complemental strand, 36508871 - 36508814
Alignment:
Q  116 tttcatcaattaaattgcaattcaaaa-ccctaacttcttttcaaaaccctaacttct 172  Q
    ||||| |||| |||||||||||||||| |||||||||||||| ||||| || ||||||    
T  36508871 tttcaacaatcaaattgcaattcaaaaaccctaacttctttttaaaactcttacttct 36508814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 78
Target Start/End: Complemental strand, 5450998 - 5450950
Alignment:
Q  31 cacaaatcaacaacaacataacataaatcatc-atttgagcataattca 78  Q
    ||||| |||||||||||||| ||||| ||||| ||||||||||||||||    
T  5450998 cacaattcaacaacaacatagcataattcatcaatttgagcataattca 5450950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 75; Significance: 1e-34; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 163 - 265
Target Start/End: Original strand, 25202084 - 25202186
Alignment:
Q  163 cctaacttctctaatcatcaaaataaaataacaacaaacatgttaaaccctatttcagaattataaacccattattagagaagctagtccgacccttacc 262  Q
    ||||| |||||||||||||||||| ||| |||||||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||||||    
T  25202084 cctaatttctctaatcatcaaaatcaaacaacaacaaccatgttaaaccctatttcagatttataaacccattattagcgaagctagtcccacccttacc 25202183  T
Q  263 tta 265  Q
    |||    
T  25202184 tta 25202186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 164 - 265
Target Start/End: Complemental strand, 48043579 - 48043478
Alignment:
Q  164 ctaacttctctaatcatcaaaataaaataacaacaaacatgttaaaccctatttcagaattataaacccattattagagaagctagtccgacccttacct 263  Q
    |||| |||||||||||||||||| ||| |||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||   ||||||||||    
T  48043579 ctaatttctctaatcatcaaaatcaaacaacaacaatcatgttaaaccctatttcaaaattataaatccattattagagaagctagttacacccttacct 48043480  T
Q  264 ta 265  Q
    ||    
T  48043479 ta 48043478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 122
Target Start/End: Original strand, 17393512 - 17393615
Alignment:
Q  17 atcatgaatccaaccacaaatcaacaacaacataacataaatcatcatttgagcataattcatcaagtatccaaatatatatataccaagagcatgcaat 116  Q
    ||||||||| |||||||||||||||||||||||  ||||| |||||||| | ||||||||||||||||||||  ||||||||| | || || ||||||||    
T  17393512 atcatgaattcaaccacaaatcaacaacaacatgtcataattcatcattcgtgcataattcatcaagtatcc--atatatatacagcatgaacatgcaat 17393609  T
Q  117 ttcatc 122  Q
    ||||||    
T  17393610 ttcatc 17393615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 187 - 261
Target Start/End: Complemental strand, 22841359 - 22841283
Alignment:
Q  187 aaaataacaacaaacatgttaaaccctatttcagaattata-aacccattattagag-aagctagtccgacccttac 261  Q
    |||| |||||||| ||||||||||||| ||||||||||||| ||||||||||||||| |||||||||| ||||||||    
T  22841359 aaaacaacaacaatcatgttaaaccctttttcagaattatacaacccattattagagaaagctagtcccacccttac 22841283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 116 - 171
Target Start/End: Complemental strand, 6805055 - 6805000
Alignment:
Q  116 tttcatcaattaaattgcaattcaaaaccctaacttcttttcaaaaccctaacttc 171  Q
    ||||| |||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  6805055 tttcaacaatcaaattgcaattcaaaaccctaacttcttttcacaaccctaacttc 6805000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 116 - 170
Target Start/End: Complemental strand, 24177897 - 24177843
Alignment:
Q  116 tttcatcaattaaattgcaattcaaaaccctaacttcttttcaaaaccctaactt 170  Q
    ||||| |||| |||||||||||||||||||||||||||||| ||||| |||||||    
T  24177897 tttcaacaatcaaattgcaattcaaaaccctaacttctttttaaaactctaactt 24177843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 258
Target Start/End: Complemental strand, 45803411 - 45803338
Alignment:
Q  187 aaaataacaacaaacatgttaaaccctatttcagaattata-aacccattattagag-aagctagtccgaccct 258  Q
    |||| ||||||||  |||||||||||| ||||||||||||| ||||||||||||||| |||||||||| |||||    
T  45803411 aaaacaacaacaacgatgttaaaccctttttcagaattatacaacccattattagagaaagctagtcccaccct 45803338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 78
Target Start/End: Complemental strand, 12488895 - 12488833
Alignment:
Q  17 atcatgaatccaaccacaaatcaacaacaacataacataaatcatc-atttgagcataattca 78  Q
    ||||||||||  | ||||| |||||||||||||||||||| ||||| ||||||||||||||||    
T  12488895 atcatgaatcttatcacaattcaacaacaacataacataattcatcaatttgagcataattca 12488833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 171
Target Start/End: Complemental strand, 13522459 - 13522422
Alignment:
Q  134 aattcaaaaccctaacttcttttcaaaaccctaacttc 171  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  13522459 aattcaaaaccctaacttcttttcaaaactctaacttc 13522422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 199 - 266
Target Start/End: Complemental strand, 54875542 - 54875473
Alignment:
Q  199 aacatgttaaaccctatttcagaattata-aacccattattagagaa-gctagtccgacccttaccttaa 266  Q
    ||||||||||||||  ||| ||||| ||| ||||||||||||||||| |||||||| |||||||||||||    
T  54875542 aacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttaa 54875473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 265
Target Start/End: Complemental strand, 12917386 - 12917306
Alignment:
Q  187 aaaataacaacaaacatgttaaaccctatttcagaattata-aacccattattagag-aagctagtccgacccttacctta 265  Q
    |||| |||||||| ||||||||||||| ||| ||||| ||| ||||||||||||||| ||| |||||| ||||||| ||||    
T  12917386 aaaacaacaacaaccatgttaaacccttttttagaatcatacaacccattattagagaaagttagtcccacccttatctta 12917306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 14177223 - 14177123
Alignment:
Q  1 acaaccacaactcataatcatgaatccaaccacaaatcaacaacaacataacataaatcatcatttgagcataattcatcaagtatccaaatatatatat 100  Q
    |||||||||||| ||||||||| || | | ||||| ||||| |||||||  ||||| |||||| ||||||| ||||||| || || |||  |||||||||    
T  14177223 acaaccacaacttataatcatgcattccatcacaattcaaccacaacatgtcataattcatcaattgagcacaattcataaactacccatttatatatat 14177124  T
Q  101 a 101  Q
    |    
T  14177123 a 14177123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 192 - 231
Target Start/End: Original strand, 13520370 - 13520409
Alignment:
Q  192 aacaacaaacatgttaaaccctatttcagaattataaacc 231  Q
    |||||||| |||||||||||||||| ||||||||||||||    
T  13520370 aacaacaaccatgttaaaccctattccagaattataaacc 13520409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 204 - 265
Target Start/End: Complemental strand, 14152462 - 14152399
Alignment:
Q  204 gttaaaccctatttcagaattata-aacccattattagagaa-gctagtccgacccttacctta 265  Q
    |||||||||| ||||||||| ||| ||| ||||||||||||| |||||||| ||||||||||||    
T  14152462 gttaaaccctttttcagaatgatacaactcattattagagaaagctagtcccacccttacctta 14152399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 204 - 265
Target Start/End: Complemental strand, 14641611 - 14641548
Alignment:
Q  204 gttaaaccctatttcagaattata-aacccattattagag-aagctagtccgacccttacctta 265  Q
    |||||||||| ||| ||||||||| ||||||||||||||| |||||| ||| ||||||||||||    
T  14641611 gttaaacccttttttagaattatacaacccattattagagaaagctaatcccacccttacctta 14641548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 204 - 265
Target Start/End: Original strand, 17208513 - 17208576
Alignment:
Q  204 gttaaaccctatttcagaattata-aacccattattagagaa-gctagtccgacccttacctta 265  Q
    |||||| ||| ||||||||||||| ||| ||||||||||||| |||||||| ||||||||||||    
T  17208513 gttaaatcctttttcagaattatacaactcattattagagaaagctagtcccacccttacctta 17208576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 204 - 265
Target Start/End: Original strand, 29907628 - 29907691
Alignment:
Q  204 gttaaaccctatttcagaattata-aacccattattagag-aagctagtccgacccttacctta 265  Q
    |||||||||| ||||||||||||| |||||| ||||| || |||||||||| ||||||||||||    
T  29907628 gttaaaccctttttcagaattatacaacccaatattaaagaaagctagtcccacccttacctta 29907691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 204 - 265
Target Start/End: Original strand, 29948794 - 29948857
Alignment:
Q  204 gttaaaccctatttcagaattata-aacccattattagag-aagctagtccgacccttacctta 265  Q
    |||||||||| ||||||||||||| |||||| ||||| || |||||||||| ||||||||||||    
T  29948794 gttaaaccctttttcagaattatacaacccaatattaaagaaagctagtcccacccttacctta 29948857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 204 - 265
Target Start/End: Original strand, 29997948 - 29998011
Alignment:
Q  204 gttaaaccctatttcagaattata-aacccattattagag-aagctagtccgacccttacctta 265  Q
    |||||||||| ||||||||||||| |||||| ||||| || |||||||||| ||||||||||||    
T  29997948 gttaaaccctttttcagaattatacaacccaatattaaagaaagctagtcccacccttacctta 29998011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 18969983 - 18970060
Alignment:
Q  1 acaaccacaactcataatcatgaatccaaccacaaatcaacaacaacataacataaatcatcatttgagcataattca 78  Q
    |||||||||||| |||||||||  | | | || || |||||||||||||  ||||| |||||| ||||||||||||||    
T  18969983 acaaccacaacttataatcatgctttccatcagaattcaacaacaacatgtcataattcatcaattgagcataattca 18970060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 265
Target Start/End: Complemental strand, 3527225 - 3527157
Alignment:
Q  199 aacatgttaaaccctatttcagaattata-aacccattattagagaa-gctagtccgacccttacctta 265  Q
    ||||||||||||||  ||| | ||| ||| ||||||||||||||||| |||||||| ||||||||||||    
T  3527225 aacatgttaaacccctttttaaaatcatacaacccattattagagaaagctagtcccacccttacctta 3527157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 265
Target Start/End: Original strand, 6156695 - 6156762
Alignment:
Q  199 aacatgttaaaccctatttcagaattata-aacccattattagagaa-gctagtccgacccttacctta 265  Q
    ||||||||||||||  ||| ||||| ||| ||||||||||||||||| |||||||| ||||||||||||    
T  6156695 aacatgttaaacccctttt-agaatcatacaacccattattagagaaagctagtcccacccttacctta 6156762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 78
Target Start/End: Original strand, 17191633 - 17191681
Alignment:
Q  31 cacaaatcaacaacaacataacataaatcatc-atttgagcataattca 78  Q
    ||||| ||| |||||||||||||||| ||||| ||||||||||||||||    
T  17191633 cacaattcagcaacaacataacataattcatcaatttgagcataattca 17191681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 1e-31; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 164 - 265
Target Start/End: Complemental strand, 36734552 - 36734451
Alignment:
Q  164 ctaacttctctaatcatcaaaataaaataacaacaaacatgttaaaccctatttcagaattataaacccattattagagaagctagtccgacccttacct 263  Q
    |||| |||||||||||||||||| ||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||| || ||| ||||||||||    
T  36734552 ctaatttctctaatcatcaaaatcaaacaacaacaaccatgttaaaccctattttagaattataaacccattattagagaagttaatcccacccttacct 36734453  T
Q  264 ta 265  Q
    ||    
T  36734452 ta 36734451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 116 - 172
Target Start/End: Complemental strand, 1383780 - 1383724
Alignment:
Q  116 tttcatcaattaaattgcaattcaaaaccctaacttcttttcaaaaccctaacttct 172  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  1383780 tttcaacaatcaaattgcaattcaaaaccctaacttcttttcaaaactctaacttct 1383724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 127 - 172
Target Start/End: Original strand, 22501795 - 22501840
Alignment:
Q  127 aaattgcaattcaaaaccctaacttcttttcaaaaccctaacttct 172  Q
    |||||||||||||||||||||||||||||||||||| |||||||||    
T  22501795 aaattgcaattcaaaaccctaacttcttttcaaaactctaacttct 22501840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 127 - 172
Target Start/End: Original strand, 22509729 - 22509774
Alignment:
Q  127 aaattgcaattcaaaaccctaacttcttttcaaaaccctaacttct 172  Q
    |||||||||||||||||||||||||||||||||||| |||||||||    
T  22509729 aaattgcaattcaaaaccctaacttcttttcaaaactctaacttct 22509774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 116 - 172
Target Start/End: Original strand, 24884285 - 24884341
Alignment:
Q  116 tttcatcaattaaattgcaattcaaaaccctaacttcttttcaaaaccctaacttct 172  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||  |||||||||    
T  24884285 tttcaacaatcaaattgcaattcaaaaccctaacttcttttcaaaattctaacttct 24884341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 187 - 265
Target Start/End: Complemental strand, 34491320 - 34491240
Alignment:
Q  187 aaaataacaacaaacatgttaaaccctatttcagaattata-aacccatta-ttagagaagctagtccgacccttacctta 265  Q
    |||| |||||||| ||||||||||||| ||||||||||||| ||| | ||| |||||||||||||||| ||||||||||||    
T  34491320 aaaacaacaacaaccatgttaaaccctttttcagaattatacaactcgttatttagagaagctagtcccacccttacctta 34491240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 204 - 265
Target Start/End: Complemental strand, 21315539 - 21315476
Alignment:
Q  204 gttaaaccctatttcagaattata-aacccattattagag-aagctagtccgacccttacctta 265  Q
    |||||||||| ||||||||||||| ||||||||||||||| |||||||||| ||||||||||||    
T  21315539 gttaaaccctttttcagaattatacaacccattattagagaaagctagtcccacccttacctta 21315476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 204 - 265
Target Start/End: Complemental strand, 21335329 - 21335266
Alignment:
Q  204 gttaaaccctatttcagaattata-aacccattattagag-aagctagtccgacccttacctta 265  Q
    |||||||||| ||||||||||||| ||||||||||||||| |||||||||| ||||||||||||    
T  21335329 gttaaaccctttttcagaattatacaacccattattagagaaagctagtcccacccttacctta 21335266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 254 - 303
Target Start/End: Original strand, 23149642 - 23149690
Alignment:
Q  254 acccttaccttaaattcatacgaacaacgttctacaatctctctgctcct 303  Q
    ||||||||||||| |||| |||||||||||||||||||||||||| ||||    
T  23149642 acccttaccttaa-ttcagacgaacaacgttctacaatctctctggtcct 23149690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 254 - 303
Target Start/End: Original strand, 23561432 - 23561480
Alignment:
Q  254 acccttaccttaaattcatacgaacaacgttctacaatctctctgctcct 303  Q
    ||||||||||||| |||| |||||||||||||||||||||||||| ||||    
T  23561432 acccttaccttaa-ttcagacgaacaacgttctacaatctctctggtcct 23561480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 185
Target Start/End: Complemental strand, 25584391 - 25584343
Alignment:
Q  136 ttcaaaaccctaacttcttttcaaaaccctaacttctctaatcatcaaaa 185  Q
    |||| |||||||||||||||||||||||||||||||| ||| ||||||||    
T  25584391 ttcacaaccctaacttcttttcaaaaccctaacttctataa-catcaaaa 25584343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 265
Target Start/End: Original strand, 23801480 - 23801548
Alignment:
Q  199 aacatgttaaaccctatttcagaattata-aacccattattagagaa-gctagtccgacccttacctta 265  Q
    ||||||||||||||  ||| ||||| ||| ||||||||||||||||| |||||||| ||||||||||||    
T  23801480 aacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttacctta 23801548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 204 - 265
Target Start/End: Original strand, 21369282 - 21369345
Alignment:
Q  204 gttaaaccctatttcagaattata-aacccattattagag-aagctagtccgacccttacctta 265  Q
    |||||||||| ||||||||||||| |||||||| |||||| ||||| |||| ||||||||||||    
T  21369282 gttaaaccctttttcagaattatacaacccattgttagagaaagcttgtcccacccttacctta 21369345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 204 - 265
Target Start/End: Original strand, 23610615 - 23610678
Alignment:
Q  204 gttaaaccctatttcagaattata-aacccattattagagaa-gctagtccgacccttacctta 265  Q
    |||||||| | ||||| ||||||| ||||||||||||||||| |||||||| ||||||||||||    
T  23610615 gttaaaccatttttcataattatacaacccattattagagaaagctagtcccacccttacctta 23610678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 172
Target Start/End: Complemental strand, 25584420 - 25584374
Alignment:
Q  127 aaattgcaattcaaaaccc-taacttcttttcaaaaccctaacttct 172  Q
    |||||| |||||||||||| ||||||||||||| |||||||||||||    
T  25584420 aaattgtaattcaaaacccctaacttcttttcacaaccctaacttct 25584374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 265
Target Start/End: Complemental strand, 20006032 - 20005971
Alignment:
Q  205 ttaaaccctatttcagaattataaacccattattagagaa-gctagtccgacccttacctta 265  Q
    ||||||||| ||||||||||||| || ||| |||| |||| |||||||| ||||||||||||    
T  20006032 ttaaaccctttttcagaattatagactcatgattaaagaaggctagtcccacccttacctta 20005971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 172
Target Start/End: Original strand, 357716 - 357752
Alignment:
Q  136 ttcaaaaccctaacttcttttcaaaaccctaacttct 172  Q
    |||||||| |||||||||||||||||| |||||||||    
T  357716 ttcaaaactctaacttcttttcaaaactctaacttct 357752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 153
Target Start/End: Complemental strand, 18388364 - 18388328
Alignment:
Q  117 ttcatcaattaaattgcaattcaaaaccctaacttct 153  Q
    |||| |||| |||||||||||||||||||||||||||    
T  18388364 ttcaacaatcaaattgcaattcaaaaccctaacttct 18388328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 68; Significance: 2e-30; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 15978034 - 15977914
Alignment:
Q  1 acaaccacaactcataatcatgaatccaaccacaaatcaacaacaacataacataaatcatcatttgagcataattcatcaagtatccaaatatatatat 100  Q
    |||||||||||| ||||||||| || ||||||||| |||||||||||||  ||||| |||||||||||| ||||||||||||||||||  |||||||||     
T  15978034 acaaccacaacttataatcatgtattcaaccacaattcaacaacaacatgtcataattcatcatttgagtataattcatcaagtatcc--atatatatac 15977937  T
Q  101 accaagagcatgcaatttcatca 123  Q
    |||| || |||||||||||||||    
T  15977936 accatgaacatgcaatttcatca 15977914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 116 - 172
Target Start/End: Original strand, 14274147 - 14274203
Alignment:
Q  116 tttcatcaattaaattgcaattcaaaaccctaacttcttttcaaaaccctaacttct 172  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  14274147 tttcaacaatcaaattgcaattcaaaaccctaacttcttttcaaaactctaacttct 14274203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 189 - 265
Target Start/End: Complemental strand, 20252260 - 20252182
Alignment:
Q  189 aataacaacaaacatgttaaaccctatttcagaattata-aacccattattagag-aagctagtccgacccttacctta 265  Q
    ||||||||| |  |||||||||||| ||||||||||||| ||| ||||||||||| |||||||||| ||||||||||||    
T  20252260 aataacaactacaatgttaaaccctttttcagaattatacaactcattattagagaaagctagtcctacccttacctta 20252182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 205 - 265
Target Start/End: Original strand, 38299738 - 38299800
Alignment:
Q  205 ttaaaccctatttcagaattata-aacccattattagag-aagctagtccgacccttacctta 265  Q
    ||||||||| ||||||||||||| ||||||||||||||| |||||||||| ||||||||||||    
T  38299738 ttaaaccctttttcagaattatacaacccattattagagaaagctagtcccacccttacctta 38299800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 204 - 265
Target Start/End: Complemental strand, 708492 - 708429
Alignment:
Q  204 gttaaaccctatttcagaattata-aacccattattagag-aagctagtccgacccttacctta 265  Q
    |||||||||| ||||||||||||| ||||||||||||||| |||||||||| |||| |||||||    
T  708492 gttaaaccctttttcagaattatacaacccattattagagaaagctagtcccacccctacctta 708429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 204 - 265
Target Start/End: Complemental strand, 15575712 - 15575649
Alignment:
Q  204 gttaaaccctatttcagaattata-aacccattattagag-aagctagtccgacccttacctta 265  Q
    |||||||||| ||||||||||||| ||||||||||||||| |||||||||| |||| |||||||    
T  15575712 gttaaaccctttttcagaattatacaacccattattagagaaagctagtcccacccctacctta 15575649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 116 - 172
Target Start/End: Complemental strand, 708649 - 708592
Alignment:
Q  116 tttcatcaattaaattgcaattcaaaa-ccctaacttcttttcaaaaccctaacttct 172  Q
    ||||| |||| ||||||||||| |||| |||||||||||||||||||| |||||||||    
T  708649 tttcaacaatcaaattgcaatttaaaaaccctaacttcttttcaaaactctaacttct 708592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 187 - 265
Target Start/End: Complemental strand, 13744591 - 13744510
Alignment:
Q  187 aaaataacaaca-aacatgttaaaccctatttcagaattataaa-cccattattagagaa-gctagtccgacccttacctta 265  Q
    |||||||||| | ||||||||||||||  ||| ||||| ||||| ||||||||||||||| |||||||| ||||||||||||    
T  13744591 aaaataacaaaacaacatgttaaacccctttttagaatcataaaacccattattagagaaagctagtcccacccttacctta 13744510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 265
Target Start/End: Complemental strand, 58481 - 58413
Alignment:
Q  199 aacatgttaaaccctatttcagaattata-aacccattattagagaa-gctagtccgacccttacctta 265  Q
    ||||||||||||||  ||| ||||| ||| ||||||||||||||||| |||||||| ||||||||||||    
T  58481 aacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttacctta 58413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 269
Target Start/End: Complemental strand, 43276796 - 43276740
Alignment:
Q  215 tttcagaattata-aacccattattagagaa-gctagtccgacccttaccttaaatt 269  Q
    ||||||||||||| ||||||||||||||||| | |||||| ||||||||||||||||    
T  43276796 tttcagaattatacaacccattattagagaaagttagtcccacccttaccttaaatt 43276740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 204 - 265
Target Start/End: Complemental strand, 8488157 - 8488094
Alignment:
Q  204 gttaaaccctatttcagaattata-aacccattattagag-aagctagtccgacccttacctta 265  Q
    |||||||||| ||| ||||||||| ||||||||||||||| ||| |||||| ||||||||||||    
T  8488157 gttaaacccttttttagaattatacaacccattattagagaaagttagtcccacccttacctta 8488094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 204 - 265
Target Start/End: Complemental strand, 8513816 - 8513753
Alignment:
Q  204 gttaaaccctatttcagaattata-aacccattattagag-aagctagtccgacccttacctta 265  Q
    |||||||||| ||| ||||||||| ||||||||||||||| ||| |||||| ||||||||||||    
T  8513816 gttaaacccttttttagaattatacaacccattattagagaaagttagtcccacccttacctta 8513753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 13352014 - 13352089
Alignment:
Q  1 acaaccacaactcataatcatgaatccaaccacaaatcaacaacaacataacataaatcatcatttgagcataatt 76  Q
    |||||||||||| ||||||||| || | | | ||| |||||||||||||  ||||| |||||| ||||||||||||    
T  13352014 acaaccacaacttataatcatgcattccatcccaattcaacaacaacatgtcataattcatcaattgagcataatt 13352089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 204 - 265
Target Start/End: Original strand, 19195601 - 19195663
Alignment:
Q  204 gttaaaccctatttcagaattata-aacccattattagagaa-gctagtccgacccttacctta 265  Q
    |||||||||| ||||||||||||| ||| ||||||||||||| |||||||| ||||||||||||    
T  19195601 gttaaaccct-tttcagaattatacaactcattattagagaaagctagtcccacccttacctta 19195663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 187 - 269
Target Start/End: Original strand, 19283026 - 19283112
Alignment:
Q  187 aaaataacaacaaacatgttaaa--ccctatttcagaattata-aacccattattagag-aagctagtccgacccttaccttaaatt 269  Q
    |||| |||||||| |||||||||  |||| ||||||||||||| |||||||| |||||| ||| |||||  ||||||||||||||||    
T  19283026 aaaacaacaacaaccatgttaaaccccctttttcagaattatacaacccattcttagagaaagttagtctcacccttaccttaaatt 19283112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 160 - 265
Target Start/End: Complemental strand, 33556210 - 33556105
Alignment:
Q  160 aaccctaacttctctaatcatcaaaataaaataacaacaaacatgttaaaccctatttcagaattata-aacccattattagag-aagctagtccgaccc 257  Q
    |||||||| |||| ||| ||||||| ||| | |||||||| ||||||||||||  ||| ||||| ||| ||||||||||||||| |||||||||| ||||    
T  33556210 aaccctaatttctataa-catcaaactaacaaaacaacaa-catgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccc 33556113  T
Q  258 ttacctta 265  Q
    ||| ||||    
T  33556112 ttatctta 33556105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 204 - 265
Target Start/End: Original strand, 43745645 - 43745708
Alignment:
Q  204 gttaaaccctatttcagaattata-aacccattattagagaa-gctagtccgacccttacctta 265  Q
    |||||||||| ||||| ||||||| ||| ||||||||||||| |||||||| ||||||||||||    
T  43745645 gttaaaccctttttcataattatacaactcattattagagaaagctagtcccacccttacctta 43745708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 204 - 265
Target Start/End: Original strand, 47095441 - 47095504
Alignment:
Q  204 gttaaaccctatttcagaattata-aacccattattagagaa-gctagtccgacccttacctta 265  Q
    |||||||| | ||||||||||||  ||||||||||||||||| |||||||| ||||||||||||    
T  47095441 gttaaaccatttttcagaattattcaacccattattagagaaagctagtcccacccttacctta 47095504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 18151538 - 18151441
Alignment:
Q  1 acaaccacaactcataatcatgaatccaaccacaaatcaacaacaacataacataaatcatcatttgagcataattcatcaagtatccaaatatatatat 100  Q
    |||||||||||| ||||||||| || ||| ||||| |||||||||   || ||||| |||||| ||| ||||| |||| ||| ||| || ||||||||||    
T  18151538 acaaccacaacttataatcatgtattcaatcacaattcaacaaca---tatcataattcatcaattgcgcatatttcaacaattattcatatatatatat 18151442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 39291695 - 39291625
Alignment:
Q  8 caactcataatcatgaatccaaccacaaatcaacaacaacataacataaatcatcatttgagcataattca 78  Q
    ||||| ||||||||| || |||||||||||||||||||| ||  || || ||| || ||||||||||||||    
T  39291695 caacttataatcatgtattcaaccacaaatcaacaacaatatgtcacaattcaccaattgagcataattca 39291625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 172
Target Start/End: Complemental strand, 12754793 - 12754736
Alignment:
Q  116 tttcatcaattaaattgcaattc-aaaaccctaacttcttttcaaaaccctaacttct 172  Q
    ||||| |||| |||||||||||| ||||||| |||||||||| ||||| |||||||||    
T  12754793 tttcaacaatcaaattgcaattcaaaaacccaaacttctttttaaaactctaacttct 12754736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 265
Target Start/End: Complemental strand, 16250287 - 16250222
Alignment:
Q  202 atgttaaaccctatttcagaattata-aacccattattagag-aagctagtccgacccttacctta 265  Q
    |||||||||||| ||||| ||||||| ||| ||||||||||| ||| |||||| ||||||||||||    
T  16250287 atgttaaaccctttttcaaaattatacaactcattattagagaaagttagtcccacccttacctta 16250222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 265
Target Start/End: Complemental strand, 13315150 - 13315082
Alignment:
Q  199 aacatgttaaaccctatttcagaattata-aacccattattagag-aagctagtccgacccttacctta 265  Q
    ||||||||||||||  ||||||||| ||| ||||||||||||||| ||| |||||  ||||||||||||    
T  13315150 aacatgttaaaccccttttcagaatcatacaacccattattagagaaagatagtctcacccttacctta 13315082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 269
Target Start/End: Original strand, 15720763 - 15720835
Alignment:
Q  199 aacatgttaaaccctatttcagaattata-aacccattattagagaa-gctagtccgacccttaccttaaatt 269  Q
    ||||||||||||||  ||| ||||| ||| |||||||||| |||||| |||||||| ||| ||||||||||||    
T  15720763 aacatgttaaacccctttttagaatcatacaacccattatgagagaaagctagtcccacctttaccttaaatt 15720835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 78
Target Start/End: Original strand, 16919651 - 16919699
Alignment:
Q  31 cacaaatcaacaacaacataacataaatcatc-atttgagcataattca 78  Q
    ||||| |||||||||||||| ||||| ||||| ||||||||||||||||    
T  16919651 cacaattcaacaacaacatagcataattcatcaatttgagcataattca 16919699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 265
Target Start/End: Complemental strand, 18874717 - 18874665
Alignment:
Q  215 tttcagaattata-aacccattattagag-aagctagtccgacccttacctta 265  Q
    ||||||||||||| ||||||||||||||| |||||||||  ||||||||||||    
T  18874717 tttcagaattatacaacccattattagagaaagctagtctcacccttacctta 18874665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 152
Target Start/End: Complemental strand, 47975019 - 47974983
Alignment:
Q  116 tttcatcaattaaattgcaattcaaaaccctaacttc 152  Q
    ||||| |||| ||||||||||||||||||||||||||    
T  47975019 tttcaacaatcaaattgcaattcaaaaccctaacttc 47974983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 67; Significance: 9e-30; HSPs: 3)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 163 - 261
Target Start/End: Complemental strand, 35588 - 35490
Alignment:
Q  163 cctaacttctctaatcatcaaaataaaataacaacaaacatgttaaaccctatttcagaattataaacccattattagagaagctagtccgacccttac 261  Q
    ||||| |||||||| ||||||||| ||| |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||||    
T  35588 cctaatttctctaaccatcaaaatcaaacaacaacaaccatgttaaaccctatttcagaattataaacccatcattagagaagctaatcccacccttac 35490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 187 - 261
Target Start/End: Complemental strand, 35415 - 35341
Alignment:
Q  187 aaaataacaacaaacatgttaaaccctatttcagaattataaacccattattagagaagctagtccgacccttac 261  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||||    
T  35415 aaaacaacaacaaccatgttaaaccctatttcagaattataaacccatcattagagaagctaatcccacccttac 35341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 187 - 265
Target Start/End: Complemental strand, 35266 - 35186
Alignment:
Q  187 aaaataacaacaaacatgttaaaccctatttcagaattata-aacccattattagag-aagctagtccgacccttacctta 265  Q
    |||| |||||||| ||||||||||||| ||| ||||||||| ||||||||||||| | |||||||| | ||||||||||||    
T  35266 aaaacaacaacaaccatgttaaacccttttttagaattatacaacccattattagggaaagctagtaccacccttacctta 35186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 62; Significance: 8e-27; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 3 - 123
Target Start/End: Complemental strand, 17375110 - 17374992
Alignment:
Q  3 aaccacaactcataatcatgaatccaaccacaaatcaacaacaacataacataaatcatcatttgagcataattcatcaagtatccaaatatatatatac 102  Q
    |||||||| | ||||||||| || ||| ||||||||||||||||||| |||||  |||||||||||||||||||||||||||||||  ||||||||| ||    
T  17375110 aaccacaaattataatcatgtattcaatcacaaatcaacaacaacatgacatagttcatcatttgagcataattcatcaagtatcc--atatatatacac 17375013  T
Q  103 caagagcatgcaatttcatca 123  Q
    || || |||| ||||||||||    
T  17375012 catgaacatgtaatttcatca 17374992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 159 - 230
Target Start/End: Complemental strand, 34140627 - 34140556
Alignment:
Q  159 aaaccctaacttctctaatcatcaaaataaaataacaacaaacatgttaaaccctatttcagaattataaac 230  Q
    ||||||||| |||||||||||||||||| ||| |||||||| |||||||||||||||| |||||||||||||    
T  34140627 aaaccctaatttctctaatcatcaaaatcaaacaacaacaaccatgttaaaccctattccagaattataaac 34140556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 159 - 230
Target Start/End: Complemental strand, 34153243 - 34153172
Alignment:
Q  159 aaaccctaacttctctaatcatcaaaataaaataacaacaaacatgttaaaccctatttcagaattataaac 230  Q
    ||||||||| |||||||||||||||||| ||| |||||||| |||||||||||||||| |||||||||||||    
T  34153243 aaaccctaatttctctaatcatcaaaatcaaacaacaacaaccatgttaaaccctattccagaattataaac 34153172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 205 - 265
Target Start/End: Complemental strand, 34140516 - 34140456
Alignment:
Q  205 ttaaaccctatttcagaattataaacccattattagagaagctagtccgacccttacctta 265  Q
    |||||||  |||||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  34140516 ttaaaccagatttcaaaattataaacccattattagagaagctagtcccacccttacctta 34140456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 214 - 265
Target Start/End: Complemental strand, 34153123 - 34153072
Alignment:
Q  214 atttcagaattataaacccattattagagaagctagtccgacccttacctta 265  Q
    |||||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  34153123 atttcaaaattataaacccattattagagaagctagtcccacccttacctta 34153072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 116 - 172
Target Start/End: Original strand, 18585603 - 18585659
Alignment:
Q  116 tttcatcaattaaattgcaattcaaaaccctaacttcttttcaaaaccctaacttct 172  Q
    ||||| |||| |||||||||||||||| ||||||||||||||||||| |||||||||    
T  18585603 tttcaacaatcaaattgcaattcaaaatcctaacttcttttcaaaactctaacttct 18585659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 21931283 - 21931343
Alignment:
Q  19 catgaatccaaccacaaatcaacaacaacataacataaatcatc-atttgagcataattca 78  Q
    ||||||| ||||||||||||||||||||||||||| || ||||| |||| |||||||||||    
T  21931283 catgaattcaaccacaaatcaacaacaacataacacaactcatcaatttaagcataattca 21931343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 187 - 265
Target Start/End: Original strand, 29045243 - 29045323
Alignment:
Q  187 aaaataacaacaaacatgttaaaccctatttcagaattata-aacccattattagag-aagctagtccgacccttacctta 265  Q
    |||| ||||| || ||||||||||||| ||||| ||||||| ||||||||||||||| |||||||||  ||||||||||||    
T  29045243 aaaacaacaataaccatgttaaaccctttttcaaaattatacaacccattattagagaaagctagtctcacccttacctta 29045323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 204 - 265
Target Start/End: Complemental strand, 21683138 - 21683075
Alignment:
Q  204 gttaaaccctatttcagaattata-aacccattattagagaa-gctagtccgacccttacctta 265  Q
    |||||||||| |||| |||||||| ||||||||||||||||| |||||||| ||||||||||||    
T  21683138 gttaaaccctttttctgaattatacaacccattattagagaaagctagtcccacccttacctta 21683075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 26506905 - 26506950
Alignment:
Q  1 acaaccacaactcataatcatgaatccaaccacaaatcaacaacaa 46  Q
    ||||| |||| |||||||||||| ||||||||||||||||||||||    
T  26506905 acaacaacaattcataatcatgattccaaccacaaatcaacaacaa 26506950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 26512204 - 26512249
Alignment:
Q  1 acaaccacaactcataatcatgaatccaaccacaaatcaacaacaa 46  Q
    ||||| |||| |||||||||||| ||||||||||||||||||||||    
T  26512204 acaacaacaattcataatcatgattccaaccacaaatcaacaacaa 26512249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 26517320 - 26517365
Alignment:
Q  1 acaaccacaactcataatcatgaatccaaccacaaatcaacaacaa 46  Q
    ||||| |||| |||||||||||| ||||||||||||||||||||||    
T  26517320 acaacaacaattcataatcatgattccaaccacaaatcaacaacaa 26517365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 265
Target Start/End: Original strand, 10446201 - 10446269
Alignment:
Q  199 aacatgttaaaccctatttcagaattata-aacccattattagagaa-gctagtccgacccttacctta 265  Q
    ||||||||||||||  ||| ||||| ||| ||||||||||||||||| |||||||| ||||||||||||    
T  10446201 aacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttacctta 10446269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 204 - 269
Target Start/End: Complemental strand, 20410575 - 20410508
Alignment:
Q  204 gttaaaccctatttcagaattata-aacccattattagag-aagctagtccgacccttaccttaaatt 269  Q
    |||||| ||| ||||||||||||| ||||||||||||||| |||||| | | ||||||||||||||||    
T  20410575 gttaaatcctttttcagaattatacaacccattattagagaaagctatttccacccttaccttaaatt 20410508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 204 - 265
Target Start/End: Original strand, 23658078 - 23658141
Alignment:
Q  204 gttaaaccctatttcagaattata-aacccattattagag-aagctagtccgacccttacctta 265  Q
    |||||||||| ||||||||||||| |||| |||||||| | |||||||||| ||||||||||||    
T  23658078 gttaaaccctttttcagaattatacaacctattattagggaaagctagtcccacccttacctta 23658141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 15005099 - 15005022
Alignment:
Q  1 acaaccacaactcataatcatgaatccaaccacaaatcaacaacaacataacataaatcatcatttgagcataattca 78  Q
    |||||||||||| ||||||||  || | | ||||| |||||||||||||  ||||| |||||| |||| |||||||||    
T  15005099 acaaccacaacttataatcattcattctatcacaattcaacaacaacatgtcataattcatcaattgaacataattca 15005022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 15889899 - 15889822
Alignment:
Q  1 acaaccacaactcataatcatgaatccaaccacaaatcaacaacaacataacataaatcatcatttgagcataattca 78  Q
    |||||||||||| ||||||||| || | | ||||| ||| |||||||||  ||||| |||||| |||| |||||||||    
T  15889899 acaaccacaacttataatcatgcattccatcacaattcatcaacaacatgtcataattcatcagttgaacataattca 15889822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 78
Target Start/End: Complemental strand, 22361920 - 22361872
Alignment:
Q  31 cacaaatcaacaacaacataacataaatcatc-atttgagcataattca 78  Q
    ||||| |||||||||||||| ||||| ||||| ||||||||||||||||    
T  22361920 cacaattcaacaacaacatagcataattcatcaatttgagcataattca 22361872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 5e-22; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 204 - 265
Target Start/End: Complemental strand, 21676561 - 21676500
Alignment:
Q  204 gttaaaccctatttcagaattataaacccattattagagaagctagtccgacccttacctta 265  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  21676561 gttaaaccctatttcataattataaacccattattagagaagctagtcccacccttacctta 21676500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 204 - 265
Target Start/End: Complemental strand, 21676654 - 21676593
Alignment:
Q  204 gttaaaccctatttcagaattataaacccattattagagaagctagtccgacccttacctta 265  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  21676654 gttaaaccctatttcataattataaacccattattagagaagctagtcccacccttacctta 21676593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 204 - 265
Target Start/End: Complemental strand, 21678907 - 21678846
Alignment:
Q  204 gttaaaccctatttcagaattataaacccattattagagaagctagtccgacccttacctta 265  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  21678907 gttaaaccctatttcataattataaacccattattagagaagctagtcccacccttacctta 21678846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 136 - 265
Target Start/End: Original strand, 22345086 - 22345216
Alignment:
Q  136 ttcaaaaccctaacttcttttcaaaaccctaacttctctaatcatcaaaa-taaaataacaacaaacatgttaaaccctatttcagaattata-aaccca 233  Q
    |||| ||||||||||||||||||||||||||||||||| ||  ||||||| ||| | |||||| ||||||||||||||  |||| |||| ||| ||||||    
T  22345086 ttcacaaccctaacttcttttcaaaaccctaacttctc-aacaatcaaaattaacaaaacaac-aacatgttaaaccccttttcggaatcatacaaccca 22345183  T
Q  234 ttattagag-aagctagtccgacccttacctta 265  Q
    ||||||||| |||||||||| ||||||||||||    
T  22345184 ttattagagaaagctagtcccacccttacctta 22345216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 136 - 265
Target Start/End: Original strand, 22356746 - 22356876
Alignment:
Q  136 ttcaaaaccctaacttcttttcaaaaccctaacttctctaatcatcaaaa-taaaataacaacaaacatgttaaaccctatttcagaattata-aaccca 233  Q
    |||| ||||||||||||||||||||||||||||||||| ||  ||||||| ||| | |||||| ||||||||||||||  |||| |||| ||| ||||||    
T  22356746 ttcacaaccctaacttcttttcaaaaccctaacttctc-aacaatcaaaattaacaaaacaac-aacatgttaaaccccttttcggaatcatacaaccca 22356843  T
Q  234 ttattagag-aagctagtccgacccttacctta 265  Q
    ||||||||| |||||||||| ||||||||||||    
T  22356844 ttattagagaaagctagtcccacccttacctta 22356876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 187 - 261
Target Start/End: Original strand, 22483758 - 22483834
Alignment:
Q  187 aaaataacaacaaacatgttaaaccctatttcagaattata-aacccattattagag-aagctagtccgacccttac 261  Q
    |||||||||||||  |||||||||||| ||||||||||||| ||||||||||||||| |||||||||| ||||||||    
T  22483758 aaaataacaacaacgatgttaaaccctttttcagaattatacaacccattattagagaaagctagtcccacccttac 22483834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 116 - 172
Target Start/End: Complemental strand, 20517184 - 20517128
Alignment:
Q  116 tttcatcaattaaattgcaattcaaaaccctaacttcttttcaaaaccctaacttct 172  Q
    ||||| |||| ||||||||||||||||||| |||||||||||| |||||||||||||    
T  20517184 tttcaacaatcaaattgcaattcaaaaccccaacttcttttcacaaccctaacttct 20517128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 116 - 172
Target Start/End: Original strand, 22345047 - 22345103
Alignment:
Q  116 tttcatcaattaaattgcaattcaaaaccctaacttcttttcaaaaccctaacttct 172  Q
    ||||| |||| |||||||||||||||||| ||||||||||||| |||||||||||||    
T  22345047 tttcaacaatcaaattgcaattcaaaaccataacttcttttcacaaccctaacttct 22345103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 116 - 172
Target Start/End: Original strand, 22356707 - 22356763
Alignment:
Q  116 tttcatcaattaaattgcaattcaaaaccctaacttcttttcaaaaccctaacttct 172  Q
    ||||| |||| |||||||||||||||||| ||||||||||||| |||||||||||||    
T  22356707 tttcaacaatcaaattgcaattcaaaaccataacttcttttcacaaccctaacttct 22356763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 204 - 265
Target Start/End: Original strand, 22208258 - 22208321
Alignment:
Q  204 gttaaaccctatttcagaattata-aacccattattagag-aagctagtccgacccttacctta 265  Q
    |||||||||| ||||||||||||| ||||||||||||||| |||||||||| ||||||||||||    
T  22208258 gttaaaccctttttcagaattatacaacccattattagagaaagctagtcccacccttacctta 22208321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 254 - 303
Target Start/End: Original strand, 19989949 - 19989998
Alignment:
Q  254 acccttaccttaaattcatacgaacaacgttctacaatctctctgctcct 303  Q
    |||||||||||||||||| ||||||||||||||||||||| |||| ||||    
T  19989949 acccttaccttaaattcagacgaacaacgttctacaatctttctggtcct 19989998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 36305777 - 36305821
Alignment:
Q  127 aaattgcaattcaaaaccctaacttcttttcaaaaccctaacttc 171  Q
    ||||||||||||||||||||||||||||||||||| | |||||||    
T  36305777 aaattgcaattcaaaaccctaacttcttttcaaaatcataacttc 36305821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 204 - 265
Target Start/End: Complemental strand, 18816358 - 18816295
Alignment:
Q  204 gttaaaccctatttcagaattata-aacccattattagag-aagctagtccgacccttacctta 265  Q
    |||||||||| ||||||||||||| |||||||| |||||| |||||||||| ||||||||||||    
T  18816358 gttaaaccctttttcagaattatacaacccatttttagagaaagctagtcccacccttacctta 18816295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 244
Target Start/End: Original strand, 22483907 - 22483968
Alignment:
Q  184 aataaaataacaacaaacatgttaaaccctatttcagaattata-aacccattattagagaa 244  Q
    ||||||| |||||||| ||||||||||||| ||| ||||||||| ||| |||||||||||||    
T  22483907 aataaaacaacaacaaccatgttaaaccctttttaagaattatacaactcattattagagaa 22483968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 265
Target Start/End: Original strand, 21399701 - 21399769
Alignment:
Q  199 aacatgttaaaccctatttcagaattata-aacccattattagagaa-gctagtccgacccttacctta 265  Q
    ||||||||||||||  ||| ||||| ||| ||||||||||||||||| |||||||| ||||||||||||    
T  21399701 aacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttacctta 21399769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 265
Target Start/End: Original strand, 21794194 - 21794262
Alignment:
Q  199 aacatgttaaaccctatttcagaattata-aacccattattagagaa-gctagtccgacccttacctta 265  Q
    ||||||||||||||  ||| ||||| ||| ||||||||||||||||| |||||||| ||||||||||||    
T  21794194 aacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttacctta 21794262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 37 - 79
Target Start/End: Complemental strand, 23226225 - 23226182
Alignment:
Q  37 tcaacaacaacataacataaatca-tcatttgagcataattcat 79  Q
    |||||||||||||||||||| ||| |||||||||||||||||||    
T  23226225 tcaacaacaacataacataattcaatcatttgagcataattcat 23226182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 204 - 265
Target Start/End: Complemental strand, 36732475 - 36732412
Alignment:
Q  204 gttaaaccctatttcagaattata-aacccattattagag-aagctagtccgacccttacctta 265  Q
    ||||||| || ||||||||||||| ||||||||||||||| |||||||||  ||||||||||||    
T  36732475 gttaaactctttttcagaattatacaacccattattagagaaagctagtcacacccttacctta 36732412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 78
Target Start/End: Complemental strand, 21198309 - 21198259
Alignment:
Q  29 accacaaatcaacaacaacataacataaatcatc-atttgagcataattca 78  Q
    ||||||| |||||||||||||||||||| ||| | ||||||||||||||||    
T  21198309 accacaattcaacaacaacataacataattcaacaatttgagcataattca 21198259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 269
Target Start/End: Original strand, 18834407 - 18834478
Alignment:
Q  199 aacatgttaaaccctatttcagaattata-aacccattattagagaa-gctagtccgacccttaccttaaatt 269  Q
    ||||||||||||||  ||| ||||| ||| || |||||||||||||| |||||||| ||||||||||||||||    
T  18834407 aacatgttaaacccctttt-agaatcatacaatccattattagagaaagctagtcccacccttaccttaaatt 18834478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 266
Target Start/End: Original strand, 21514680 - 21514744
Alignment:
Q  204 gttaaaccctatttcagaattata-aacccattattagagaag-ctagtccgacccttaccttaa 266  Q
    |||||||||| ||| ||||||||| ||| |||||||||||||  ||||||| |||||||||||||    
T  21514680 gttaaaccctttttaagaattatacaactcattattagagaaatctagtcccacccttaccttaa 21514744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 231
Target Start/End: Complemental strand, 36732557 - 36732513
Alignment:
Q  187 aaaataacaacaaacatgttaaaccctatttcagaattataaacc 231  Q
    |||| |||||||| ||||||||||||| ||| |||||||||||||    
T  36732557 aaaacaacaacaaccatgttaaacccttttttagaattataaacc 36732513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 153
Target Start/End: Complemental strand, 42265683 - 42265647
Alignment:
Q  117 ttcatcaattaaattgcaattcaaaaccctaacttct 153  Q
    |||| |||| |||||||||||||||||||||||||||    
T  42265683 ttcaacaatcaaattgcaattcaaaaccctaacttct 42265647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 2e-21; HSPs: 17)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 231
Target Start/End: Original strand, 35660835 - 35660907
Alignment:
Q  159 aaaccctaacttctctaatcatcaaaataaaataacaacaaacatgttaaaccctatttcagaattataaacc 231  Q
    ||||||||| |||||||||||||||||| ||| |||||||| |||||||||||||||| ||||||||||||||    
T  35660835 aaaccctaatttctctaatcatcaaaatcaaacaacaacaaccatgttaaaccctattccagaattataaacc 35660907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 16225352 - 16225308
Alignment:
Q  1 acaaccacaactcataatcatgaatccaaccacaaatcaacaaca 45  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  16225352 acaaccacaactcataatcatgaatccaaccacaaatcaacaaca 16225308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 215 - 269
Target Start/End: Complemental strand, 12424342 - 12424286
Alignment:
Q  215 tttcagaattata-aacccattattagagaa-gctagtccgacccttaccttaaatt 269  Q
    ||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||    
T  12424342 tttcagaattatacaacccattattagagaaagctagtcccacccttaccttaaatt 12424286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 204 - 265
Target Start/End: Original strand, 14631124 - 14631187
Alignment:
Q  204 gttaaaccctatttcagaattata-aacccattattagag-aagctagtccgacccttacctta 265  Q
    |||||||||| ||||||||||||| ||||||||||||||| |||||||||  ||||||||||||    
T  14631124 gttaaaccctttttcagaattatacaacccattattagagaaagctagtctcacccttacctta 14631187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 204 - 265
Target Start/End: Original strand, 16296927 - 16296990
Alignment:
Q  204 gttaaaccctatttcagaattata-aacccattattagag-aagctagtccgacccttacctta 265  Q
    |||||||||| ||||||||||||| ||| ||||||||||| |||||||||| ||||||||||||    
T  16296927 gttaaaccctttttcagaattatacaactcattattagagaaagctagtcccacccttacctta 16296990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 204 - 269
Target Start/End: Original strand, 33186892 - 33186959
Alignment:
Q  204 gttaaaccctatttcagaattata-aacccattattagag-aagctagtccgacccttaccttaaatt 269  Q
    |||||||||| ||||||||||||| ||||||||||||||| |||||||||  |||| |||||||||||    
T  33186892 gttaaaccctttttcagaattatacaacccattattagagaaagctagtctcacccctaccttaaatt 33186959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 116 - 172
Target Start/End: Complemental strand, 19434787 - 19434730
Alignment:
Q  116 tttcatcaattaaattgcaattcaaaa-ccctaacttcttttcaaaaccctaacttct 172  Q
    ||||| |||| |||||||||||||||| |||||||||||||| ||||| |||||||||    
T  19434787 tttcaacaatcaaattgcaattcaaaaaccctaacttctttttaaaactctaacttct 19434730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 202 - 265
Target Start/End: Original strand, 25513838 - 25513903
Alignment:
Q  202 atgttaaaccctatttcagaattata-aacccattattagag-aagctagtccgacccttacctta 265  Q
    |||||||||||| ||||||||||||| ||| ||||||||||| |||||||||| ||| ||||||||    
T  25513838 atgttaaaccctttttcagaattatacaactcattattagagaaagctagtcccaccattacctta 25513903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 172
Target Start/End: Complemental strand, 45314254 - 45314210
Alignment:
Q  127 aaattgcaattcaaaaccctaacttcttttcaaaaccctaacttct 172  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||    
T  45314254 aaattgcaattcaaa-cccaaacttcttttcaaaaccctaacttct 45314210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 123
Target Start/End: Original strand, 49071788 - 49071869
Alignment:
Q  40 acaacaacataacataaatcatcatttgagcataattcatcaagtatccaaatatatatataccaagagcatgcaatttcatca 123  Q
    ||||||||||  ||||| |||||| ||||||||| |||||||||||| |  ||||| ||||| || || |||||||||||||||    
T  49071788 acaacaacatgtcataattcatcaattgagcatatttcatcaagtattc--atatacatatatcatgaacatgcaatttcatca 49071869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 204 - 265
Target Start/End: Original strand, 9638999 - 9639062
Alignment:
Q  204 gttaaaccctatttcagaattata-aacccattattagagaa-gctagtccgacccttacctta 265  Q
    |||||||||| ||||||||||| | ||| ||||||||||||| |||||||| ||||||||||||    
T  9638999 gttaaaccctttttcagaattacacaactcattattagagaaagctagtcccacccttacctta 9639062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 261
Target Start/End: Original strand, 26446197 - 26446255
Alignment:
Q  205 ttaaaccctatttcagaattata-aacccattattagag-aagctagtccgacccttac 261  Q
    ||||||| | ||||||||||||| ||||||||||||||| |||||||||| ||||||||    
T  26446197 ttaaaccatttttcagaattatacaacccattattagagaaagctagtcctacccttac 26446255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 265
Target Start/End: Original strand, 9622473 - 9622541
Alignment:
Q  199 aacatgttaaaccctatttcagaattata-aacccattattagagaa-gctagtccgacccttacctta 265  Q
    ||||||||||||||  ||| ||||| | | ||||||||||||||||| |||||||| ||||||||||||    
T  9622473 aacatgttaaacccctttttagaatcagacaacccattattagagaaagctagtcccacccttacctta 9622541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 265
Target Start/End: Original strand, 10273367 - 10273435
Alignment:
Q  199 aacatgttaaaccctatttcagaattata-aacccattattagagaa-gctagtccgacccttacctta 265  Q
    ||||||||| ||||  ||| ||||| ||| ||||||||||||||||| |||||||| ||||||||||||    
T  10273367 aacatgttatacccctttttagaatcatacaacccattattagagaaagctagtcccacccttacctta 10273435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 155
Target Start/End: Complemental strand, 14353916 - 14353888
Alignment:
Q  127 aaattgcaattcaaaaccctaacttcttt 155  Q
    |||||||||||||||||||||||||||||    
T  14353916 aaattgcaattcaaaaccctaacttcttt 14353888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 78
Target Start/End: Original strand, 15044920 - 15044968
Alignment:
Q  31 cacaaatcaacaacaacataacataaatcatc-atttgagcataattca 78  Q
    ||||| |||||||||||||| ||||| ||||| ||||||||||||||||    
T  15044920 cacaattcaacaacaacatagcataattcatcaatttgagcataattca 15044968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 265
Target Start/End: Original strand, 55583180 - 55583248
Alignment:
Q  199 aacatgttaaaccctatttcagaattata-aacccattattagagaa-gctagtccgacccttacctta 265  Q
    ||||||||||||||  ||| | ||| ||| ||||||||||||||||| |||||||| ||||||||||||    
T  55583180 aacatgttaaacccctttttataatcatacaacccattattagagaaagctagtcccacccttacctta 55583248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 79
Target Start/End: Complemental strand, 244979 - 244917
Alignment:
Q  17 atcatgaatccaaccacaaatcaacaacaacataacataaatcatcatttgagcataattcat 79  Q
    ||||||||| |||||||||||||||||||||||  ||||| |||||| |||||||||||||||    
T  244979 atcatgaattcaaccacaaatcaacaacaacatgtcataattcatcaattgagcataattcat 244917  T

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Target: scaffold0594 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 187 - 265
Target Start/End: Original strand, 2219 - 2299
Alignment:
Q  187 aaaataacaacaaacatgttaaaccctatttcagaattata-aacccattattagag-aagctagtccgacccttacctta 265  Q
    |||| ||||||||  |||||||||||| ||||||||||||| |||||||||||| || |||||||||| ||||||||||||    
T  2219 aaaacaacaacaactatgttaaaccctttttcagaattatacaacccattattatagaaagctagtcccacccttacctta 2299  T

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Target: scaffold0230 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 116 - 172
Target Start/End: Complemental strand, 6922 - 6866
Alignment:
Q  116 tttcatcaattaaattgcaattcaaaaccctaacttcttttcaaaaccctaacttct 172  Q
    ||||| |||| |||||||||||||||| ||||||||||||||||||| |||||||||    
T  6922 tttcaacaatcaaattgcaattcaaaatcctaacttcttttcaaaactctaacttct 6866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 116 - 172
Target Start/End: Original strand, 9949 - 10005
Alignment:
Q  116 tttcatcaattaaattgcaattcaaaaccctaacttcttttcaaaaccctaacttct 172  Q
    ||||| |||| |||||||||||||||||||||||||||||| ||||| |||||||||    
T  9949 tttcaacaatcaaattgcaattcaaaaccctaacttctttttaaaactctaacttct 10005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 116 - 172
Target Start/End: Original strand, 22046 - 22102
Alignment:
Q  116 tttcatcaattaaattgcaattcaaaaccctaacttcttttcaaaaccctaacttct 172  Q
    ||||| |||| |||||||||||||||||||||||||| ||| ||||| |||||||||    
T  22046 tttcaacaatcaaattgcaattcaaaaccctaacttcattttaaaactctaacttct 22102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 187 - 265
Target Start/End: Complemental strand, 66152 - 66072
Alignment:
Q  187 aaaataacaacaaacatgttaaaccctatttcagaattata-aacccattattagag-aagctagtccgacccttacctta 265  Q
    |||| |||||||| ||||||||||||| ||||||||||||| |||||||||||| || || ||||||| ||||||||||||    
T  66152 aaaacaacaacaaccatgttaaaccctttttcagaattatacaacccattattaaagaaatctagtcccacccttacctta 66072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 265
Target Start/End: Original strand, 75921 - 75989
Alignment:
Q  199 aacatgttaaaccctatttcagaattata-aacccattattagagaa-gctagtccgacccttacctta 265  Q
    ||||||||||||||  ||| ||||| ||| ||||||||||| ||||| |||||||| ||||||||||||    
T  75921 aacatgttaaacccctttttagaatcatacaacccattattggagaaagctagtcccacccttacctta 75989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0819 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0819
Description:

Target: scaffold0819; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 5183 - 5264
Alignment:
Q  150 ttcttttcaaaa-ccctaacttctctaatcatcaaaat---aaaataacaacaaacatgttaaaccctatttcagaattata 227  Q
    |||||||||||| ||||||||||| |||||||||||||   | || |||||||| ||||||||||||| |||||||||||||    
T  5183 ttcttttcaaaaaccctaacttctttaatcatcaaaatcaaacaacaacaacaaccatgttaaaccctgtttcagaattata 5264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 204 - 265
Target Start/End: Original strand, 2870 - 2933
Alignment:
Q  204 gttaaaccctatttcagaattata-aacccattattagag-aagctagtccgacccttacctta 265  Q
    |||||||||| ||||||||||||| ||||||||||||||| |||||||||| ||||||||||||    
T  2870 gttaaaccctttttcagaattatacaacccattattagagaaagctagtcccacccttacctta 2933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 12785 - 12668
Alignment:
Q  1 acaaccacaactcataatcatgaatccaaccacaaatcaacaacaacataacataaatcatcatttgagcataattcatcaagtatccaaatatatatat 100  Q
    |||||||||||| ||||||||| || |||||||||||||||||||   |  || || |||||| |||||||||||| ||||| ||| |  || |||||||    
T  12785 acaaccacaacttataatcatgtattcaaccacaaatcaacaaca---tgtcacaattcatcaattgagcataatttatcaattattc--atttatatat 12691  T
Q  101 accaagagcatgcaatttcatca 123  Q
    | || || |||||||||||||||    
T  12690 aacatgaacatgcaatttcatca 12668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 38; Significance: 0.000000000002; HSPs: 3)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 172
Target Start/End: Complemental strand, 40339 - 40294
Alignment:
Q  127 aaattgcaattcaaaaccctaacttcttttcaaaaccctaacttct 172  Q
    ||||| |||||||||||||||||||||||||| |||||||||||||    
T  40339 aaatttcaattcaaaaccctaacttcttttcacaaccctaacttct 40294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 185
Target Start/End: Complemental strand, 40292 - 40244
Alignment:
Q  136 ttcaaaaccctaacttcttttcaaaaccctaacttctctaatcatcaaaa 185  Q
    ||||||| ||||||||||||||||||||||||||||| ||| ||||||||    
T  40292 ttcaaaatcctaacttcttttcaaaaccctaacttctataa-catcaaaa 40244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 172
Target Start/End: Complemental strand, 40311 - 40275
Alignment:
Q  136 ttcaaaaccctaacttcttttcaaaaccctaacttct 172  Q
    |||| ||||||||||||||||||||| ||||||||||    
T  40311 ttcacaaccctaacttcttttcaaaatcctaacttct 40275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0853 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0853
Description:

Target: scaffold0853; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 215 - 269
Target Start/End: Complemental strand, 2506 - 2450
Alignment:
Q  215 tttcagaattata-aacccattattagagaa-gctagtccgacccttaccttaaatt 269  Q
    ||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||    
T  2506 tttcagaattatacaacccattattagagaaagctagtcccacccttaccttaaatt 2450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 215 - 269
Target Start/End: Original strand, 5633 - 5689
Alignment:
Q  215 tttcagaattata-aacccattattagagaa-gctagtccgacccttaccttaaatt 269  Q
    ||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||    
T  5633 tttcagaattatacaacccattattagagaaagctagtcccacccttaccttaaatt 5689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 116349 - 116277
Alignment:
Q  1 acaaccacaactcataatcatgaatccaaccacaaatcaacaacaacataacataaatcatcatttgagcata 73  Q
    |||||||||||| ||||||||| || |||||||||||||| ||||||||  || || |||||| |||||||||    
T  116349 acaaccacaacttataatcatgtattcaaccacaaatcaataacaacatgtcacaattcatcaattgagcata 116277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1186 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold1186
Description:

Target: scaffold1186; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 204 - 265
Target Start/End: Original strand, 2009 - 2072
Alignment:
Q  204 gttaaaccctatttcagaattata-aacccattattagag-aagctagtccgacccttacctta 265  Q
    |||||||||| ||||||||||||| ||||||||||||||| |||||||||  ||||||||||||    
T  2009 gttaaaccctttttcagaattatacaacccattattagagaaagctagtctcacccttacctta 2072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 204 - 265
Target Start/End: Complemental strand, 17584 - 17521
Alignment:
Q  204 gttaaaccctatttcagaattata-aacccattattagagaa-gctagtccgacccttacctta 265  Q
    |||||||||| ||||||||||||| || ||||||||||| || |||||||||||||||||||||    
T  17584 gttaaaccctttttcagaattatacaatccattattagaaaaagctagtccgacccttacctta 17521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 204 - 265
Target Start/End: Original strand, 13938 - 14001
Alignment:
Q  204 gttaaaccctatttcagaattata-aacccattattagagaa-gctagtccgacccttacctta 265  Q
    |||||||||| |||||||||| || ||||||||||||||||| |||||||| ||||||||||||    
T  13938 gttaaaccctttttcagaattttacaacccattattagagaaagctagtcccacccttacctta 14001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 204 - 265
Target Start/End: Original strand, 18264 - 18327
Alignment:
Q  204 gttaaaccctatttcagaattata-aacccattattagag-aagctagtccgacccttacctta 265  Q
    |||||||||| ||||||||||||| ||||||||||||||| |||||||||  ||||||||||||    
T  18264 gttaaaccctttttcagaattatacaacccattattagagaaagctagtcacacccttacctta 18327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 204 - 265
Target Start/End: Complemental strand, 186259 - 186196
Alignment:
Q  204 gttaaaccctatttcagaattata-aacccattattagag-aagctagtccgacccttacctta 265  Q
    |||||||||| ||||||||||||| ||||||||||||||| |||||||||  ||||||||||||    
T  186259 gttaaaccctttttcagaattatacaacccattattagagaaagctagtctcacccttacctta 186196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0505 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 265
Target Start/End: Original strand, 4926 - 4988
Alignment:
Q  204 gttaaaccctatttcagaattataaacccattattagag-aagctagtccgacccttacctta 265  Q
    |||||||||| || |||||||||| | |||||||||||| |||||||||| ||||||||||||    
T  4926 gttaaacccttttacagaattatacaaccattattagagaaagctagtcccacccttacctta 4988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 205 - 265
Target Start/End: Complemental strand, 14648 - 14586
Alignment:
Q  205 ttaaaccctatttcagaattata-aacccattattagag-aagctagtccgacccttacctta 265  Q
    ||||||||| ||||||||||||| ||||||||||||||| |||||||||  ||||||||||||    
T  14648 ttaaaccctttttcagaattatacaacccattattagagaaagctagtctcacccttacctta 14586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 205 - 265
Target Start/End: Complemental strand, 23706 - 23644
Alignment:
Q  205 ttaaaccctatttcagaattata-aacccattattagag-aagctagtccgacccttacctta 265  Q
    ||||||||| ||||||||||||| ||||||||||||||| |||||||||  ||||||||||||    
T  23706 ttaaaccctttttcagaattatacaacccattattagagaaagctagtctcacccttacctta 23644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 116 - 172
Target Start/End: Complemental strand, 106289 - 106232
Alignment:
Q  116 tttcatcaattaaattgcaattcaaaa-ccctaacttcttttcaaaaccctaacttct 172  Q
    ||||| |||| |||||||||||||||| |||||||||||||| ||||| |||||||||    
T  106289 tttcaacaatcaaattgcaattcaaaaaccctaacttctttttaaaactctaacttct 106232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0878 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0878
Description:

Target: scaffold0878; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 204 - 265
Target Start/End: Complemental strand, 3485 - 3422
Alignment:
Q  204 gttaaaccctatttcagaattata-aacccattattagagaa-gctagtccgacccttacctta 265  Q
    |||||||||| ||||||||| ||| ||| ||||||||||||| |||||||| ||||||||||||    
T  3485 gttaaaccctttttcagaatcatacaacgcattattagagaaagctagtcccacccttacctta 3422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 204 - 265
Target Start/End: Original strand, 1065 - 1128
Alignment:
Q  204 gttaaaccctatttcagaattata-aacccattattagag-aagctagtccgacccttacctta 265  Q
    |||||||||| ||||||||||||| || |||||||||||| |||||||||  ||||||||||||    
T  1065 gttaaaccctttttcagaattatacaatccattattagagaaagctagtctcacccttacctta 1128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 265
Target Start/End: Complemental strand, 15678 - 15616
Alignment:
Q  204 gttaaaccctatttcagaattata-aacccattattagagaagctagtccgacccttacctta 265  Q
    |||||||||| ||| ||||| ||| || ||||||||||||||| |||||| ||||||||||||    
T  15678 gttaaacccttttttagaatcatacaaaccattattagagaagttagtcccacccttacctta 15616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 31; Significance: 0.00000003; HSPs: 3)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 244
Target Start/End: Original strand, 11588 - 11646
Alignment:
Q  187 aaaataacaacaaacatgttaaaccctatttcagaattata-aacccattattagagaa 244  Q
    |||| ||||||||  |||||||||||| ||||||||||||| |||||||| ||||||||    
T  11588 aaaacaacaacaacgatgttaaaccctttttcagaattatacaacccatttttagagaa 11646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 265
Target Start/End: Original strand, 5445 - 5506
Alignment:
Q  206 taaaccctatttcagaattata-aacccattattagag-aagctagtccgacccttacctta 265  Q
    |||||||| ||||||||||||| ||| ||||||||||| ||| |||||| ||||||||||||    
T  5445 taaaccctttttcagaattatacaactcattattagagaaaggtagtcccacccttacctta 5506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 265
Target Start/End: Original strand, 19840 - 19908
Alignment:
Q  199 aacatgttaaaccctatttcagaattata-aacccattattagag-aagctagtccgacccttacctta 265  Q
    ||||||||||||||  ||| ||||| ||| ||||||||||||||| || ||||||| ||||||||||||    
T  19840 aacatgttaaacccctttttagaatcatacaacccattattagagaaatctagtcctacccttacctta 19908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 7313 - 7238
Alignment:
Q  1 acaaccacaactcataatcatgaatccaaccacaaatcaacaacaacataacataaatcatcatttgagcataattca 78  Q
    ||||| |||||||||| |||||||| | |||||||||||  ||||||||  || || |||||| ||||||||||||||    
T  7313 acaactacaactcatagtcatgaattccaccacaaatca--aacaacatgtcacaattcatcaattgagcataattca 7238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 171
Target Start/End: Original strand, 12182 - 12219
Alignment:
Q  134 aattcaaaaccctaacttcttttcaaaaccctaacttc 171  Q
    |||||||||||||| |||||||||||||| ||||||||    
T  12182 aattcaaaaccctagcttcttttcaaaactctaacttc 12219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 5945 - 6022
Alignment:
Q  1 acaaccacaactcataatcatgaatccaaccacaaatcaacaacaacataacataaatcatcatttgagcataattca 78  Q
    |||||||||||| | ||||||| || | | ||||| ||||| |||||||  |||||||||||| ||||||| ||||||    
T  5945 acaaccacaacttacaatcatgcattcgatcacaattcaactacaacatgtcataaatcatcaattgagcacaattca 6022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 156
Target Start/End: Original strand, 26626 - 26655
Alignment:
Q  127 aaattgcaattcaaaaccctaacttctttt 156  Q
    ||||||||||||||||||||||||||||||    
T  26626 aaattgcaattcaaaaccctaacttctttt 26655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 1694 - 1618
Alignment:
Q  1 acaaccacaactcataatcatgaatccaaccacaaatcaacaacaacataacataaatcatcatttgagcataattc 77  Q
    |||||||||||| ||||||||| || | | || |  |||||||||||||  ||||| |||||| |||||||||||||    
T  1694 acaaccacaacttataatcatgcattccatcatatttcaacaacaacatgtcataattcatcaattgagcataattc 1618  T

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Target: scaffold0414 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0414
Description:

Target: scaffold0414; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 269
Target Start/End: Complemental strand, 11228 - 11156
Alignment:
Q  199 aacatgttaaaccctatttcagaattata-aacccattattagagaa-gctagtccgacccttaccttaaatt 269  Q
    |||||| |||||||  ||| ||||| ||| ||||||||||||||||| |||||||| | ||||||||||||||    
T  11228 aacatgataaacccctttttagaatcatacaacccattattagagaaagctagtcccatccttaccttaaatt 11156  T

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Target: scaffold0379 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 265
Target Start/End: Original strand, 10932 - 10999
Alignment:
Q  199 aacatgttaaaccctatttcagaattata-aacccattattagag-aagctagtccgacccttacctta 265  Q
    ||||||||||||||| ||| ||||| ||| ||||||||||||||| |||||||| | ||||||||||||    
T  10932 aacatgttaaacccttttt-agaatcatacaacccattattagagaaagctagttccacccttacctta 10999  T

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Target: scaffold0308 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 153
Target Start/End: Original strand, 13318 - 13354
Alignment:
Q  117 ttcatcaattaaattgcaattcaaaaccctaacttct 153  Q
    |||| |||| |||||||||||||||||||||||||||    
T  13318 ttcaacaatcaaattgcaattcaaaaccctaacttct 13354  T

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Target: scaffold0180 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 153
Target Start/End: Complemental strand, 28503 - 28467
Alignment:
Q  117 ttcatcaattaaattgcaattcaaaaccctaacttct 153  Q
    |||| |||| |||||||||||||||||||||||||||    
T  28503 ttcaacaatcaaattgcaattcaaaaccctaacttct 28467  T

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Target: scaffold0149 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 152
Target Start/End: Original strand, 21464 - 21500
Alignment:
Q  116 tttcatcaattaaattgcaattcaaaaccctaacttc 152  Q
    ||||| |||| ||||||||||||||||||||||||||    
T  21464 tttcaacaatgaaattgcaattcaaaaccctaacttc 21500  T

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Target: scaffold0125 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 155
Target Start/End: Complemental strand, 7342 - 7314
Alignment:
Q  127 aaattgcaattcaaaaccctaacttcttt 155  Q
    |||||||||||||||||||||||||||||    
T  7342 aaattgcaattcaaaaccctaacttcttt 7314  T

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Target: scaffold0116 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 153
Target Start/End: Complemental strand, 35638 - 35602
Alignment:
Q  117 ttcatcaattaaattgcaattcaaaaccctaacttct 153  Q
    |||| |||| |||||||||||||||||||||||||||    
T  35638 ttcaacaatcaaattgcaattcaaaaccctaacttct 35602  T

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Target: scaffold0063 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 44306 - 44234
Alignment:
Q  2 caaccacaactcataatcatgaatccaaccacaaatcaacaacaacataacataaatcatcatttgagcataa 74  Q
    |||||||||||  |||||||| |||| | ||||| |||||||||||||  ||||| || ||| ||||||||||    
T  44306 caaccacaacttgtaatcatgcatcccatcacaattcaacaacaacatgtcataattcgtcaattgagcataa 44234  T

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Target: scaffold0048 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 265
Target Start/End: Complemental strand, 68794 - 68726
Alignment:
Q  199 aacatgttaaaccctatttcagaattata-aacccattattagag-aagctagtccgacccttacctta 265  Q
    ||||||||||||||  ||| ||||| ||| ||||||||||||||| ||| |||||| ||||||||||||    
T  68794 aacatgttaaacccgtttttagaatcatataacccattattagagaaaggtagtcccacccttacctta 68726  T

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Target: scaffold0031 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 265
Target Start/End: Complemental strand, 127411 - 127343
Alignment:
Q  199 aacatgttaaaccctatttcagaattata-aacccattattagagaa-gctagtccgacccttacctta 265  Q
    ||||||||||||||  ||| ||||| ||| || |||||||||||||| |||||||| ||||||||||||    
T  127411 aacatgttaaacccctttttagaatcatacaatccattattagagaaagctagtcccacccttacctta 127343  T

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