View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5240_high_23 (Length: 240)
Name: NF5240_high_23
Description: NF5240
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5240_high_23 |
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Alignment Details
Target: chr7 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 23 - 221
Target Start/End: Complemental strand, 38557414 - 38557216
Alignment:
| Q |
23 |
tacaggagcttatagtaagtttagtaaaaacatggtggaaatttaaggctttcaaaagatctttactaatcactgaattgacaaaaacctgttatctctt |
122 |
Q |
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| T |
38557414 |
tacaggagcttatagtaagtttagtaaaaacatggtggaaatttaaggctttcaaaagatctttactaatcactgaattgacaaaaacctgttatctctt |
38557315 |
T |
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| Q |
123 |
actgccaaatggccagagtttttgagcagaattcccagctgcaaaattatgcaggctaaacaacgcagtccacccaaatccaatgctcacaattccagc |
221 |
Q |
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| T |
38557314 |
acggccaaatggccagagtttttgagcagaattcccagctgcaaaattatgcaggctaaacaacgcagtccacccaaatccaatgctcacaactccagc |
38557216 |
T |
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