View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5240_low_23 (Length: 245)

Name: NF5240_low_23
Description: NF5240
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5240_low_23
NF5240_low_23
[»] chr7 (86 HSPs)
chr7 (12-245)||(3734621-3734854)
chr7 (12-245)||(7318298-7318532)
chr7 (12-245)||(10586864-10587098)
chr7 (18-245)||(8313240-8313469)
chr7 (12-243)||(9574434-9574665)
chr7 (35-245)||(17153016-17153228)
chr7 (28-245)||(15869620-15869837)
chr7 (17-245)||(4785861-4786095)
chr7 (12-239)||(6013624-6013850)
chr7 (19-245)||(16365730-16365958)
chr7 (9-241)||(1587710-1587940)
chr7 (23-241)||(18662470-18662685)
chr7 (7-245)||(3190896-3191133)
chr7 (72-245)||(7492163-7492337)
chr7 (17-245)||(4818861-4819096)
chr7 (102-245)||(4986580-4986723)
chr7 (102-245)||(4990678-4990821)
chr7 (15-245)||(31492955-31493179)
chr7 (12-245)||(5108591-5108824)
chr7 (69-244)||(14195870-14196045)
chr7 (45-245)||(1848101-1848301)
chr7 (61-241)||(9731516-9731697)
chr7 (97-245)||(1584569-1584715)
chr7 (72-245)||(2563843-2564017)
chr7 (49-245)||(8053940-8054132)
chr7 (171-245)||(8979006-8979080)
chr7 (19-245)||(39273022-39273249)
chr7 (112-245)||(12181633-12181767)
chr7 (60-245)||(3329545-3329732)
chr7 (12-134)||(7397277-7397399)
chr7 (71-197)||(1584305-1584429)
chr7 (171-245)||(11803105-11803179)
chr7 (49-245)||(18368856-18369054)
chr7 (69-245)||(2350644-2350821)
chr7 (142-244)||(8054457-8054562)
chr7 (17-124)||(8293888-8293994)
chr7 (49-245)||(8877446-8877643)
chr7 (35-153)||(17829686-17829803)
chr7 (60-245)||(11221054-11221238)
chr7 (171-244)||(13759860-13759933)
chr7 (70-245)||(16297732-16297894)
chr7 (73-245)||(19153323-19153493)
chr7 (73-245)||(20752722-20752892)
chr7 (49-244)||(20582285-20582477)
chr7 (142-244)||(23099925-23100025)
chr7 (172-245)||(9864327-9864400)
chr7 (78-245)||(10648603-10648770)
chr7 (82-239)||(4579128-4579285)
chr7 (172-245)||(9500469-9500542)
chr7 (172-228)||(6005878-6005934)
chr7 (109-245)||(12329707-12329843)
chr7 (49-131)||(13418660-13418743)
chr7 (171-245)||(17203049-17203122)
chr7 (49-159)||(9131019-9131132)
chr7 (172-245)||(9916591-9916664)
chr7 (172-245)||(9924503-9924576)
chr7 (172-245)||(10584487-10584560)
chr7 (172-245)||(10937627-10937700)
chr7 (172-245)||(18467476-18467549)
chr7 (172-241)||(22339312-22339381)
chr7 (154-240)||(13418564-13418653)
chr7 (171-245)||(16059021-16059096)
chr7 (154-244)||(17077154-17077247)
chr7 (171-245)||(4449005-4449079)
chr7 (72-126)||(6006082-6006136)
chr7 (171-245)||(13277528-13277602)
chr7 (49-134)||(140252-140337)
chr7 (12-76)||(4986725-4986790)
chr7 (12-76)||(4990823-4990888)
chr7 (17-233)||(6042497-6042703)
chr7 (170-245)||(1872810-1872885)
chr7 (172-245)||(5530046-5530119)
chr7 (204-245)||(5797536-5797577)
chr7 (172-233)||(9245218-9245279)
chr7 (172-245)||(16306719-16306792)
chr7 (172-245)||(18449267-18449340)
chr7 (172-244)||(18466031-18466103)
chr7 (61-131)||(17077254-17077325)
chr7 (210-245)||(21227204-21227239)
chr7 (199-245)||(7397221-7397266)
chr7 (101-244)||(21230338-21230479)
chr7 (206-243)||(7748121-7748157)
chr7 (188-241)||(14755147-14755200)
chr7 (172-245)||(18495398-18495471)
chr7 (206-243)||(18661617-18661654)
chr7 (172-244)||(21912481-21912553)
[»] chr2 (47 HSPs)
chr2 (12-245)||(32085488-32085720)
chr2 (12-245)||(20174478-20174709)
chr2 (12-244)||(29027522-29027755)
chr2 (17-245)||(25618581-25618809)
chr2 (15-239)||(25885305-25885528)
chr2 (28-245)||(27908975-27909193)
chr2 (17-245)||(29719077-29719305)
chr2 (17-244)||(11382600-11382826)
chr2 (37-245)||(15339263-15339472)
chr2 (15-232)||(28606021-28606239)
chr2 (35-244)||(13776365-13776575)
chr2 (17-245)||(17349382-17349603)
chr2 (12-131)||(17890076-17890194)
chr2 (98-245)||(45621809-45621955)
chr2 (12-245)||(23011605-23011836)
chr2 (12-141)||(23933388-23933515)
chr2 (17-245)||(17743321-17743550)
chr2 (55-245)||(25196035-25196226)
chr2 (163-245)||(25888216-25888294)
chr2 (49-245)||(28925546-28925743)
chr2 (171-245)||(12953294-12953368)
chr2 (24-245)||(45553155-45553372)
chr2 (70-244)||(31804797-31804973)
chr2 (161-243)||(9774325-9774405)
chr2 (171-245)||(24090926-24091000)
chr2 (171-245)||(25535299-25535373)
chr2 (171-245)||(30411703-30411777)
chr2 (17-131)||(26603205-26603320)
chr2 (19-158)||(25887750-25887893)
chr2 (80-245)||(17635683-17635849)
chr2 (171-233)||(25920303-25920365)
chr2 (171-245)||(27418391-27418465)
chr2 (175-244)||(30900848-30900917)
chr2 (166-244)||(19200130-19200207)
chr2 (171-245)||(25530472-25530546)
chr2 (171-245)||(29142986-29143060)
chr2 (77-136)||(17675534-17675594)
chr2 (49-131)||(25530574-25530657)
chr2 (171-245)||(26603350-26603424)
chr2 (172-233)||(5777253-5777314)
chr2 (172-245)||(8503071-8503144)
chr2 (60-131)||(30411805-30411878)
chr2 (172-244)||(28770444-28770516)
chr2 (171-245)||(26667342-26667417)
chr2 (73-131)||(29143088-29143147)
chr2 (172-230)||(21078627-21078685)
chr2 (204-245)||(8447083-8447123)
[»] scaffold0024 (1 HSPs)
scaffold0024 (10-245)||(39609-39845)
[»] scaffold0622 (1 HSPs)
scaffold0622 (12-245)||(753-985)
[»] chr4 (55 HSPs)
chr4 (12-245)||(5679230-5679463)
chr4 (72-245)||(17672027-17672200)
chr4 (81-244)||(12578176-12578339)
chr4 (12-245)||(19092320-19092553)
chr4 (14-245)||(14648920-14649151)
chr4 (12-245)||(19929514-19929749)
chr4 (70-241)||(17951195-17951366)
chr4 (70-241)||(17955047-17955218)
chr4 (107-245)||(11490557-11490694)
chr4 (28-245)||(22357388-22357609)
chr4 (12-245)||(25121069-25121299)
chr4 (17-245)||(24639306-24639528)
chr4 (17-245)||(17336979-17337209)
chr4 (60-243)||(17216844-17217030)
chr4 (79-244)||(21323784-21323948)
chr4 (16-245)||(13908879-13909110)
chr4 (7-159)||(19374649-19374800)
chr4 (112-245)||(22175904-22176036)
chr4 (17-245)||(7582322-7582552)
chr4 (16-245)||(8969575-8969795)
chr4 (72-234)||(15164803-15164964)
chr4 (70-245)||(19636486-19636660)
chr4 (172-245)||(19882665-19882738)
chr4 (171-245)||(13692669-13692743)
chr4 (98-245)||(13128802-13128948)
chr4 (174-245)||(13992879-13992950)
chr4 (98-240)||(16730328-16730468)
chr4 (19-226)||(26115755-26115959)
chr4 (72-245)||(17709782-17709952)
chr4 (171-245)||(19492700-19492774)
chr4 (73-245)||(20829640-20829812)
chr4 (159-245)||(11933444-11933529)
chr4 (172-245)||(20315025-20315098)
chr4 (78-245)||(3774850-3775021)
chr4 (172-244)||(11521192-11521264)
chr4 (175-245)||(25094592-25094663)
chr4 (171-245)||(25097859-25097934)
chr4 (98-245)||(40227801-40227947)
chr4 (179-232)||(9737512-9737565)
chr4 (19-91)||(11935237-11935310)
chr4 (12-116)||(22173395-22173499)
chr4 (199-244)||(22526390-22526435)
chr4 (73-245)||(19562076-19562252)
chr4 (172-244)||(23080367-23080439)
chr4 (171-233)||(9052710-9052772)
chr4 (188-245)||(15047153-15047210)
chr4 (188-245)||(15107214-15107271)
chr4 (35-127)||(12761387-12761479)
chr4 (12-106)||(23644938-23645034)
chr4 (17-67)||(9052877-9052926)
chr4 (17-131)||(11521041-11521153)
chr4 (13-67)||(30600040-30600093)
chr4 (199-245)||(43941815-43941861)
chr4 (170-242)||(10777392-10777464)
chr4 (204-244)||(12839813-12839853)
[»] chr3 (52 HSPs)
chr3 (12-245)||(12805734-12805964)
chr3 (35-244)||(21303218-21303427)
chr3 (12-245)||(21325365-21325597)
chr3 (17-245)||(16245575-16245803)
chr3 (7-245)||(8319064-8319310)
chr3 (12-245)||(21825711-21825942)
chr3 (17-245)||(2167463-2167691)
chr3 (7-207)||(17155855-17156053)
chr3 (12-191)||(2723678-2723855)
chr3 (73-245)||(3116321-3116492)
chr3 (17-245)||(41508392-41508620)
chr3 (12-245)||(8445848-8446077)
chr3 (37-242)||(17438296-17438502)
chr3 (49-245)||(4650256-4650447)
chr3 (61-245)||(20429735-20429920)
chr3 (98-245)||(21301943-21302090)
chr3 (35-245)||(5508361-5508570)
chr3 (69-245)||(10744927-10745102)
chr3 (55-245)||(19925505-19925697)
chr3 (12-127)||(8143757-8143870)
chr3 (12-245)||(18736515-18736745)
chr3 (7-124)||(8267077-8267195)
chr3 (172-244)||(10917944-10918016)
chr3 (172-245)||(8557130-8557203)
chr3 (171-244)||(22349435-22349508)
chr3 (176-245)||(28728969-28729038)
chr3 (172-245)||(821515-821588)
chr3 (171-245)||(8889152-8889226)
chr3 (171-245)||(12411176-12411250)
chr3 (171-224)||(7478335-7478388)
chr3 (154-245)||(19171814-19171908)
chr3 (7-245)||(31285852-31286088)
chr3 (49-131)||(8770146-8770229)
chr3 (70-131)||(8765244-8765306)
chr3 (172-245)||(6289928-6290001)
chr3 (175-244)||(8765143-8765212)
chr3 (70-245)||(932767-932943)
chr3 (35-130)||(20023416-20023512)
chr3 (175-245)||(8770044-8770114)
chr3 (179-245)||(10923172-10923238)
chr3 (199-245)||(12759412-12759458)
chr3 (171-245)||(16229942-16230016)
chr3 (203-245)||(18458456-18458498)
chr3 (186-231)||(19532319-19532364)
chr3 (171-244)||(19908333-19908406)
chr3 (171-227)||(7495095-7495151)
chr3 (49-131)||(16229831-16229915)
chr3 (36-87)||(19171731-19171782)
chr3 (200-243)||(27542944-27542986)
chr3 (17-67)||(821361-821410)
chr3 (171-229)||(19167452-19167510)
chr3 (49-124)||(12754800-12754877)
[»] chr8 (45 HSPs)
chr8 (13-232)||(13697893-13698111)
chr8 (7-244)||(25182262-25182501)
chr8 (70-245)||(14528174-14528349)
chr8 (7-245)||(34497140-34497378)
chr8 (12-245)||(19786756-19786991)
chr8 (12-245)||(13314833-13315066)
chr8 (18-245)||(30122002-30122228)
chr8 (49-245)||(30806379-30806571)
chr8 (28-245)||(24114140-24114356)
chr8 (55-245)||(29382244-29382435)
chr8 (12-134)||(7983717-7983837)
chr8 (73-245)||(6884983-6885155)
chr8 (70-245)||(17509271-17509445)
chr8 (169-245)||(2637623-2637699)
chr8 (20-245)||(24269623-24269848)
chr8 (154-245)||(27659470-27659564)
chr8 (28-245)||(18448398-18448616)
chr8 (28-126)||(24110526-24110625)
chr8 (12-245)||(24644863-24645097)
chr8 (172-245)||(5850966-5851039)
chr8 (98-245)||(21314648-21314794)
chr8 (173-245)||(15238824-15238896)
chr8 (172-245)||(14075619-14075692)
chr8 (17-116)||(26394544-26394644)
chr8 (17-151)||(9641995-9642129)
chr8 (154-245)||(17101873-17101967)
chr8 (172-244)||(24904659-24904731)
chr8 (72-245)||(44010924-44011097)
chr8 (171-245)||(23893201-23893275)
chr8 (171-245)||(25226161-25226235)
chr8 (172-245)||(17976644-17976717)
chr8 (204-245)||(30783774-30783815)
chr8 (171-230)||(16403952-16404011)
chr8 (49-131)||(23893091-23893174)
chr8 (172-245)||(5052923-5052995)
chr8 (210-245)||(24723480-24723515)
chr8 (60-124)||(17101793-17101859)
chr8 (47-124)||(18569200-18569278)
chr8 (171-245)||(19264067-19264141)
chr8 (97-240)||(28276685-28276826)
chr8 (200-245)||(14006120-14006165)
chr8 (204-245)||(17972196-17972236)
chr8 (212-245)||(24110696-24110729)
chr8 (199-244)||(26615270-26615315)
chr8 (136-182)||(26394648-26394693)
[»] chr6 (53 HSPs)
chr6 (28-245)||(12183188-12183405)
chr6 (7-244)||(28933494-28933733)
chr6 (15-245)||(22567865-22568093)
chr6 (55-245)||(9838381-9838571)
chr6 (12-245)||(8241302-8241530)
chr6 (12-245)||(21907457-21907693)
chr6 (73-244)||(4339761-4339932)
chr6 (12-241)||(11176979-11177210)
chr6 (35-245)||(23645631-23645841)
chr6 (49-245)||(27737566-27737763)
chr6 (55-245)||(15466395-15466584)
chr6 (35-245)||(21672298-21672509)
chr6 (35-245)||(21679714-21679925)
chr6 (50-245)||(25927184-25927377)
chr6 (12-234)||(6630531-6630755)
chr6 (98-245)||(22410256-22410401)
chr6 (154-245)||(9516810-9516904)
chr6 (97-245)||(21688721-21688869)
chr6 (13-245)||(19244610-19244833)
chr6 (12-232)||(9898803-9899019)
chr6 (172-245)||(9726047-9726120)
chr6 (98-244)||(23143748-23143893)
chr6 (50-245)||(17826974-17827166)
chr6 (60-245)||(23844353-23844539)
chr6 (72-229)||(24252131-24252287)
chr6 (49-245)||(27124372-27124566)
chr6 (35-245)||(22566025-22566236)
chr6 (60-209)||(8039025-8039177)
chr6 (142-245)||(18075360-18075462)
chr6 (178-245)||(17729177-17729244)
chr6 (17-245)||(5624665-5624895)
chr6 (171-245)||(22413049-22413123)
chr6 (28-231)||(24475095-24475298)
chr6 (172-245)||(17299832-17299905)
chr6 (49-245)||(23231862-23232057)
chr6 (171-245)||(24657455-24657529)
chr6 (173-245)||(7542962-7543034)
chr6 (49-131)||(25781916-25781999)
chr6 (36-124)||(24657333-24657422)
chr6 (46-122)||(1635110-1635186)
chr6 (70-124)||(17382214-17382269)
chr6 (12-131)||(24215615-24215732)
chr6 (191-245)||(20005899-20005953)
chr6 (175-245)||(24251541-24251611)
chr6 (12-197)||(14079297-14079483)
chr6 (172-245)||(28586031-28586104)
chr6 (38-202)||(20002255-20002421)
chr6 (72-130)||(22813621-22813680)
chr6 (171-245)||(21841688-21841762)
chr6 (171-241)||(23009395-23009464)
chr6 (171-241)||(23778900-23778969)
chr6 (50-99)||(18075289-18075338)
chr6 (199-243)||(17382172-17382216)
[»] chr1 (55 HSPs)
chr1 (12-245)||(24281302-24281532)
chr1 (15-245)||(22664231-22664463)
chr1 (35-191)||(28008184-28008340)
chr1 (12-245)||(33190702-33190934)
chr1 (17-245)||(24214569-24214791)
chr1 (17-245)||(13345182-13345410)
chr1 (7-180)||(18100849-18101022)
chr1 (75-245)||(51473780-51473950)
chr1 (12-193)||(15807861-15808042)
chr1 (49-245)||(9787756-9787953)
chr1 (37-245)||(12208626-12208835)
chr1 (49-245)||(21666486-21666682)
chr1 (98-245)||(147656-147801)
chr1 (7-241)||(12012650-12012870)
chr1 (7-245)||(31235883-31236122)
chr1 (37-245)||(17610121-17610330)
chr1 (17-233)||(9401542-9401760)
chr1 (35-245)||(23037874-23038085)
chr1 (12-156)||(17121343-17121486)
chr1 (98-245)||(25405558-25405704)
chr1 (49-245)||(15543844-15544040)
chr1 (12-245)||(17359187-17359421)
chr1 (78-245)||(16787634-16787800)
chr1 (12-91)||(25961007-25961085)
chr1 (46-245)||(29242544-29242731)
chr1 (12-151)||(16359988-16360128)
chr1 (172-245)||(3591654-3591727)
chr1 (73-245)||(15813057-15813228)
chr1 (60-245)||(16179032-16179217)
chr1 (35-245)||(22620287-22620498)
chr1 (35-245)||(44795394-44795605)
chr1 (171-245)||(18736240-18736314)
chr1 (171-245)||(21449114-21449188)
chr1 (172-245)||(17837542-17837615)
chr1 (154-245)||(14779590-14779684)
chr1 (102-233)||(21847670-21847801)
chr1 (49-156)||(32382886-32382994)
chr1 (171-244)||(21987982-21988055)
chr1 (172-245)||(24306307-24306379)
chr1 (154-245)||(21334699-21334793)
chr1 (171-245)||(16916933-16917008)
chr1 (166-245)||(26648966-26649044)
chr1 (171-245)||(727492-727566)
chr1 (163-243)||(15813516-15813597)
chr1 (172-245)||(24267783-24267856)
chr1 (173-245)||(27117720-27117792)
chr1 (70-245)||(22622915-22623091)
chr1 (60-124)||(18529080-18529145)
chr1 (70-124)||(16069460-16069515)
chr1 (16-124)||(21449222-21449333)
chr1 (175-245)||(18825680-18825750)
chr1 (12-100)||(15813383-15813471)
chr1 (98-131)||(18736180-18736213)
chr1 (73-129)||(21973107-21973164)
chr1 (49-131)||(16916823-16916907)
[»] chr5 (45 HSPs)
chr5 (12-245)||(18208092-18208322)
chr5 (12-245)||(34487663-34487891)
chr5 (12-245)||(24266799-24267028)
chr5 (12-245)||(24343430-24343659)
chr5 (12-245)||(22755546-22755780)
chr5 (40-245)||(18937773-18937979)
chr5 (12-244)||(15690803-15691034)
chr5 (70-245)||(17171453-17171627)
chr5 (41-244)||(19283726-19283928)
chr5 (11-230)||(36175173-36175391)
chr5 (12-209)||(24662018-24662214)
chr5 (28-245)||(24245401-24245618)
chr5 (98-245)||(20315357-20315504)
chr5 (12-233)||(26120901-26121120)
chr5 (98-245)||(19004155-19004300)
chr5 (7-143)||(24265311-24265447)
chr5 (7-143)||(24341942-24342078)
chr5 (112-239)||(25402278-25402405)
chr5 (12-137)||(26121165-26121290)
chr5 (35-245)||(24852036-24852246)
chr5 (78-226)||(24260560-24260708)
chr5 (156-245)||(25550487-25550578)
chr5 (49-245)||(39434487-39434676)
chr5 (50-245)||(17431908-17432103)
chr5 (171-245)||(23388838-23388912)
chr5 (55-245)||(24140467-24140651)
chr5 (49-245)||(34128661-34128857)
chr5 (16-204)||(20744513-20744701)
chr5 (153-244)||(15375861-15375955)
chr5 (171-245)||(17315100-17315174)
chr5 (172-244)||(17185489-17185561)
chr5 (173-245)||(19086181-19086253)
chr5 (97-245)||(15469961-15470112)
chr5 (171-245)||(20564080-20564155)
chr5 (49-129)||(28664902-28664983)
chr5 (172-244)||(24656854-24656926)
chr5 (171-233)||(20549704-20549766)
chr5 (171-245)||(20858710-20858784)
chr5 (171-245)||(28664799-28664873)
chr5 (49-124)||(17314990-17315066)
chr5 (17-155)||(17474493-17474631)
chr5 (170-224)||(17635325-17635379)
chr5 (171-245)||(19051574-19051647)
chr5 (172-242)||(23265182-23265252)
chr5 (204-245)||(26502144-26502184)
[»] scaffold0427 (1 HSPs)
scaffold0427 (13-234)||(2660-2881)
[»] scaffold0005 (1 HSPs)
scaffold0005 (14-245)||(168141-168372)
[»] scaffold0062 (1 HSPs)
scaffold0062 (12-245)||(43067-43301)
[»] scaffold0008 (3 HSPs)
scaffold0008 (12-245)||(54885-55120)
scaffold0008 (154-245)||(48173-48264)
scaffold0008 (171-245)||(234366-234440)
[»] scaffold0155 (1 HSPs)
scaffold0155 (17-245)||(35839-36069)
[»] scaffold0102 (1 HSPs)
scaffold0102 (70-245)||(35562-35738)
[»] scaffold0838 (1 HSPs)
scaffold0838 (55-244)||(2396-2583)
[»] scaffold0832 (1 HSPs)
scaffold0832 (55-244)||(2427-2614)
[»] scaffold0043 (1 HSPs)
scaffold0043 (12-245)||(89696-89927)
[»] scaffold0351 (2 HSPs)
scaffold0351 (49-232)||(151-338)
scaffold0351 (49-169)||(5641-5759)
[»] scaffold0638 (1 HSPs)
scaffold0638 (72-245)||(722-897)
[»] scaffold0002 (1 HSPs)
scaffold0002 (49-182)||(114573-114710)
[»] scaffold0650 (1 HSPs)
scaffold0650 (172-245)||(6312-6385)
[»] scaffold0001 (2 HSPs)
scaffold0001 (98-245)||(69106-69251)
scaffold0001 (185-244)||(81513-81571)
[»] scaffold0016 (1 HSPs)
scaffold0016 (171-245)||(3556-3630)
[»] scaffold0035 (1 HSPs)
scaffold0035 (171-245)||(69938-70012)
[»] scaffold1869 (1 HSPs)
scaffold1869 (154-245)||(369-463)
[»] scaffold0019 (2 HSPs)
scaffold0019 (172-244)||(11266-11338)
scaffold0019 (35-245)||(181568-181779)
[»] scaffold0671 (2 HSPs)
scaffold0671 (49-131)||(569-652)
scaffold0671 (171-230)||(482-541)
[»] scaffold0056 (3 HSPs)
scaffold0056 (55-131)||(25113-25190)
scaffold0056 (171-245)||(21301-21375)
scaffold0056 (72-131)||(21403-21463)
[»] scaffold0034 (1 HSPs)
scaffold0034 (171-245)||(76442-76517)
[»] scaffold0128 (1 HSPs)
scaffold0128 (172-242)||(592-662)
[»] scaffold0653 (1 HSPs)
scaffold0653 (172-233)||(4484-4545)
[»] scaffold0136 (1 HSPs)
scaffold0136 (204-245)||(15498-15539)
[»] scaffold0090 (1 HSPs)
scaffold0090 (184-245)||(7425-7486)
[»] scaffold0672 (1 HSPs)
scaffold0672 (185-245)||(1759-1819)
[»] scaffold0263 (1 HSPs)
scaffold0263 (49-131)||(15785-15868)
[»] scaffold0054 (1 HSPs)
scaffold0054 (98-136)||(72143-72181)
[»] scaffold0238 (1 HSPs)
scaffold0238 (172-245)||(19135-19208)


Alignment Details
Target: chr7 (Bit Score: 218; Significance: 1e-120; HSPs: 86)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 12 - 245
Target Start/End: Complemental strand, 3734854 - 3734621
Alignment:
Q  12 atgaatgttatttaattccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgctctgttg 111  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  3734854 atgaatgttatttaattccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaaacaggtaacttgctctgttg 3734755  T
Q  112 caaacagataaaatttgcaatctttaacccttaactcttttattttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaatcca 211  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||    
T  3734754 caaacagataaaatttgcaatctttaacccttaactcttttattttatatcgtcaacttaaaataagtaacgtgaattgtttggaccaaacaacaattca 3734655  T
Q  212 tgtggatacgatactctacttatcactttattac 245  Q
    ||||||||||||||||||||||||||||||||||    
T  3734654 tgtggatacgatactctacttatcactttattac 3734621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 12 - 245
Target Start/End: Complemental strand, 7318532 - 7318298
Alignment:
Q  12 atgaatgttatttaattccaacgaaataaataggggagattcaaa-gagtcctaaccattgcttacttttctgcaaccaaagcaga--taacttgctctg 108  Q
    |||||||||||||||||||||| ||||||||||||| |||||||| ||||||||| | ||| || ||||||||||||||||  |||  ||||||||||||    
T  7318532 atgaatgttatttaattccaacaaaataaatagggg-gattcaaaagagtcctaatcgttgtttccttttctgcaaccaaaa-agaagtaacttgctctg 7318435  T
Q  109 ttgcaaacagataaaatttgcaatctttaacccttaactcttttattttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaat 208  Q
    |||||||||||||||| ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||| ||||  ||||| ||| |||| |||||    
T  7318434 ttgcaaacagataaaaattgcaatctctaacccttatctcttttattttatatcgtcaacttaaaataagtaatgcgagctgtttagacgaaacgacaat 7318335  T
Q  209 ccatgtggatacgatactctacttatcactttattac 245  Q
    |||||||||||||||||||||||||||||||||||||    
T  7318334 ccatgtggatacgatactctacttatcactttattac 7318298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 12 - 245
Target Start/End: Original strand, 10586864 - 10587098
Alignment:
Q  12 atgaatgttatttaat-tccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaacca-aagcagataacttgctctgt 109  Q
    |||||||||||||||| |||||| ||||||||| ||| ||||||||||||| |||||| ||||||||||| |||||||| || ||  || ||||||||||    
T  10586864 atgaatgttatttaatatccaacaaaataaataaggg-gattcaaagagtcttaaccactgcttacttttttgcaaccagaaacatgtatcttgctctgt 10586962  T
Q  110 tgcaaacagataaaatttgcaatctttaacccttaactcttttattttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaatc 209  Q
    ||||||||||||||| |||||||||||||||||||  ||||||||||||||| || |||||||||||||||||  || |||||| ||| |||| ||||||    
T  10586963 tgcaaacagataaaaattgcaatctttaacccttatttcttttattttatattgtaaacttaaaataagtaacatgagttgtttagacgaaacgacaatc 10587062  T
Q  210 catgtggatacgatactctacttatcactttattac 245  Q
    | ||| ||||||||||||||||||||||||||||||    
T  10587063 cctgtagatacgatactctacttatcactttattac 10587098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 18 - 245
Target Start/End: Original strand, 8313240 - 8313469
Alignment:
Q  18 gttatttaattccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgctctgttgcaaaca 117  Q
    ||||||||| |||||| ||||||||||||| ||||| |||||||||||   |||||||||||||||||||||||  || ||||||||||||||| |||||    
T  8313240 gttatttaaatccaacaaaataaatagggg-gattccaagagtcctaaatgttgcttacttttctgcaaccaaaataggtaacttgctctgttgaaaaca 8313338  T
Q  118 gataaaatttgcaatctttaacccttaactcttttattttatatcgtcaacttaaaataagtaacgc---gaattgtttggaccaaacaacaatccatgt 214  Q
    ||||||| ||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||| |    | |||||| ||| |||| ||||||| |||    
T  8313339 gataaaaattgcaatctctaacccttaactcttttattttataccttcaacttaaaataagtaacacaattagttgtttagacgaaacgacaatccctgt 8313438  T
Q  215 ggatacgatactctacttatcactttattac 245  Q
    |||||||||| ||||||||||||||||||||    
T  8313439 ggatacgataatctacttatcactttattac 8313469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 12 - 243
Target Start/End: Complemental strand, 9574665 - 9574434
Alignment:
Q  12 atgaatgttatttaat-tccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgctctgtt 110  Q
    |||| ||||||||||| |||||| ||||||||||||| |||||||||| |||||||   || |||||||||| ||| |||| ||| | ||||||||| ||    
T  9574665 atgattgttatttaatatccaacaaaataaatagggg-gattcaaagaatcctaactgctgtttacttttcttcaaacaaaccaggttacttgctctatt 9574567  T
Q  111 gcaaacagataaaatttgcaatctttaacccttaactcttttattttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaatcc 210  Q
    |||||||||||||| || |||| | |||||||||||||||||||||||||||||||||||||||||| |||||||| | |||| ||| |||||||||||     
T  9574566 gcaaacagataaaaattacaatttctaacccttaactcttttattttatatcgtcaacttaaaataaataacgcgagtcgtttagacgaaacaacaatct 9574467  T
Q  211 atgtggatacgatactctacttatcactttatt 243  Q
     ||| ||||||||||||||||||||||||||||    
T  9574466 ctgtagatacgatactctacttatcactttatt 9574434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 35 - 245
Target Start/End: Original strand, 17153016 - 17153228
Alignment:
Q  35 aaataaataggggag-attcaaagagtcctaaccattgcttacttttctgcaaccaaag-cagataacttgctctgttgcaaacagataaaatttgcaat 132  Q
    ||||||||||||| | |||||||||||| |||||  ||||||||||||||||||||||  ||| ||||||||| |||||||||||||||||| |  ||||    
T  17153016 aaataaatagggggggattcaaagagtcataaccgctgcttacttttctgcaaccaaaaacaggtaacttgctttgttgcaaacagataaaaataacaat 17153115  T
Q  133 ctttaacccttaactcttttattttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctactt 232  Q
    || ||||||||| |||||||||||||| ||||||||||||||||||||||||||  ||||| ||| |||| |||||| ||||||||||||||||||||||    
T  17153116 ctctaacccttatctcttttattttatgtcgtcaacttaaaataagtaacgcgagctgtttagacgaaacgacaatctatgtggatacgatactctactt 17153215  T
Q  233 atcactttattac 245  Q
    |||||||| ||||    
T  17153216 atcactttcttac 17153228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 28 - 245
Target Start/End: Complemental strand, 15869837 - 15869620
Alignment:
Q  28 tccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaag-cagataacttgctctgttgcaaacagataaaatt 126  Q
    |||||| | ||||| ||||| ||||||||||||||||||| ||| |||||||| ||||||||||  ||| ||||||  ||| ||||||||||||||||||    
T  15869837 tccaacaatataaacaggggggattcaaagagtcctaaccgttgtttacttttatgcaaccaaaaacaggtaactttttctattgcaaacagataaaatt 15869738  T
Q  127 tgcaatctttaacccttaactcttttattttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatact 226  Q
     |||||||  |||||||| || ||||||||||||||||||||||||||||||||||||  | | ||| ||| |||||| ||||| || ||||||||||||    
T  15869737 -gcaatctcaaacccttatctattttattttatatcgtcaacttaaaataagtaacgcagactatttagacaaaacaaaaatccttgcggatacgatact 15869639  T
Q  227 ctacttatcactttattac 245  Q
    |||||||||||||||||||    
T  15869638 ctacttatcactttattac 15869620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 17 - 245
Target Start/End: Complemental strand, 4786095 - 4785861
Alignment:
Q  17 tgttatttaat-tccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaag-cagataacttgctctgttgcaa 114  Q
    ||||||||||| |||||| | ||||||||| | ||||| |||| ||||||||  ||||||||||||||||||||||  ||| ||||||||||| ||||||    
T  4786095 tgttatttaatatccaacaatataaataggagggattcgaagaatcctaaccgctgcttacttttctgcaaccaaaaacaggtaacttgctctattgcaa 4785996  T
Q  115 acagataaaa----tttgcaatctttaacccttaactcttttattttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaatcc 210  Q
    | ||||||||    ||   ||||| |||||||||||||||||||||||||||||||||| ||||||||||||| ||| || |||||| |||| |||||||    
T  4785995 atagataaaaaaaattaaaaatctctaacccttaactcttttattttatatcgtcaactaaaaataagtaacgtgaagtgcttggacgaaacgacaatcc 4785896  T
Q  211 atgtggatacgatactctacttatcactttattac 245  Q
     |||||||  |||||||||||||||||||||||||    
T  4785895 ctgtggatgtgatactctacttatcactttattac 4785861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 12 - 239
Target Start/End: Complemental strand, 6013850 - 6013624
Alignment:
Q  12 atgaatgttatttaattccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgctctgttg 111  Q
    ||||||||||||||| |||||| |||||||||| || ||||||||||||| ||||| ||||| ||||||||||||||||| ||  ||| ||||| |||||    
T  6013850 atgaatgttatttaaatccaacaaaataaatagagg-gattcaaagagtcataaccgttgctcacttttctgcaaccaaa-catgtaaattgctttgttg 6013753  T
Q  112 caaacagataaaat-ttgcaatctttaacccttaactcttttattttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaatcc 210  Q
    |||||| ||||||  ||||||||  |||||||| |||||||||||||||||| ||||  |||||||||||| || |||||||||||  |||  | |||||    
T  6013752 caaacaaataaaaaattgcaatcgctaaccctttactcttttattttatatcatcaaactaaaataagtaaagccaattgtttggataaaatgagaatcc 6013653  T
Q  211 atgtggatacgatactctacttatcactt 239  Q
     ||||||||||||||||||||||||||||    
T  6013652 ttgtggatacgatactctacttatcactt 6013624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 19 - 245
Target Start/End: Complemental strand, 16365958 - 16365730
Alignment:
Q  19 ttatttaat-tccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaag-cagataacttgctctgttgcaaac 116  Q
    ||||||||| |||||| | ||||||||||||||||| |||| ||||||||  ||||||||||| ||||||||||  ||  |||||||||| | ||||||     
T  16365958 ttatttaatatccaacaatataaataggggagattcgaagaatcctaaccgctgcttacttttttgcaaccaaaaacatgtaacttgctcagatgcaaat 16365859  T
Q  117 agataaaatttgcaa-tctttaacccttaactcttttattttatatcgtcaacttaaaa-taagtaacgcgaattgtttggaccaaacaacaatccatgt 214  Q
    |||| ||| ||| || ||| ||| ||||||||||||||||  ||||||||||||||||| |||||||||||||||||||| || |||| |||||||||||    
T  16365858 agatcaaaattgaaaatctctaaaccttaactcttttatt--atatcgtcaacttaaaaataagtaacgcgaattgtttgcacaaaacgacaatccatgt 16365761  T
Q  215 ggatacgatactctacttatcactttattac 245  Q
    |||||||||||||||||| | ||||||||||    
T  16365760 ggatacgatactctactttttactttattac 16365730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 9 - 241
Target Start/End: Complemental strand, 1587940 - 1587710
Alignment:
Q  9 gagatgaatgttatttaattccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgctctg 108  Q
    |||||||||||||||||||| |||| ||| | ||| ||| |||||||||| || || ||  |||||||||||||||||||||   || ||||||||||||    
T  1587940 gagatgaatgttatttaattacaacaaaagagatatggg-gattcaaagattcatatccgctgcttacttttctgcaaccaag--aggtaacttgctctg 1587844  T
Q  109 ttgcaaacagataaaatttgcaatcttt--aacccttaactcttttattttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaaca 206  Q
    ||||||||| |||||| ||||||||| |  |||||| || |||||||||||||||||||||   |||||| |||||||||||||||||||  |||||||     
T  1587843 ttgcaaacaaataaaaattgcaatctctctaaccctaaa-tcttttattttatatcgtcaaaacaaaataggtaacgcgaattgtttggatgaaacaact 1587745  T
Q  207 atccatgtggatacgatactctacttatcacttta 241  Q
    ||| |||| |||| ||||||||| |||||||||||    
T  1587744 atctatgtagatatgatactctaattatcacttta 1587710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 23 - 241
Target Start/End: Complemental strand, 18662685 - 18662470
Alignment:
Q  23 ttaattccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgctctgttgcaaacagataa 122  Q
    ||||||||||| |||| | |||||| ||||| |||||||||||||  ||||||| |||||||||||||| ||| ||||||||||||||||||||| ||||    
T  18662685 ttaattccaac-aaatgattagggg-gattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggtaacttgctctgttgcaaacaaataa 18662588  T
Q  123 aatttgcaatctttaacccttaactcttttattt-tatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacg 221  Q
    || ||||||| | |||| || || |||||||||| ||| | ||  ||   |||||||||||| ||||||||||||| |||| ||||||| ||||||||||    
T  18662587 aaattgcaatatctaactctcaaatcttttatttatattttgttcac--caaataagtaacgtgaattgtttggacgaaacgacaatccttgtggatacg 18662490  T
Q  222 atactctacttatcacttta 241  Q
    ||||||||||||||||||||    
T  18662489 atactctacttatcacttta 18662470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 7 - 245
Target Start/End: Original strand, 3190896 - 3191133
Alignment:
Q  7 gtgagatgaatgttatttaattccaacgaaataaataggggag-attcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgct 105  Q
    |||| |||| |||||||||| |||||| ||||||||||||| | ||||||| |||||||  |  | ||||||||||||||||||||  |||||||||| |    
T  3190896 gtgacatgactgttatttaaatccaacaaaataaatagggggggattcaaatagtcctactcgctacttacttttctgcaaccaaat-agataacttg-t 3190993  T
Q  106 ctgttgcaaacagataaaatttgcaatctttaacccttaactcttttattttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaac 205  Q
    |||||||||||| |||||| || |||||| ||||||  ||| ||||| ||||||||| |||||||||||||| |||| |||||||||||||| |||| ||    
T  3190994 ctgttgcaaacatataaaaattacaatctctaacccaaaacccttttgttttatatcctcaacttaaaataaataacacgaattgtttggacgaaacgac 3191093  T
Q  206 aatccatgtggatacgatactctacttatcactttattac 245  Q
    ||||| | | ||||  ||||| ||||| ||||||||||||    
T  3191094 aatccctatagatataatactttacttttcactttattac 3191133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 72 - 245
Target Start/End: Original strand, 7492163 - 7492337
Alignment:
Q  72 cttacttttctgcaaccaaag-cagataacttgctctgttgcaaacagataaaatttgcaa-tctttaacccttaactcttttattttatatcgtcaact 169  Q
    ||||||||||||||||||||  ||| |||||||||||||||||||||| ||||| |||||| ||| ||||||||||||||||||||  ||||| ||||      
T  7492163 cttacttttctgcaaccaaaaacaggtaacttgctctgttgcaaacagttaaaaattgcaaatctctaacccttaactcttttatt--atatcatcaaaa 7492260  T
Q  170 taaaa-taagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    ||||| ||||||| || ||||||||| || |||||||||||| ||||||||||||||||||||||||| ||||||||    
T  7492261 taaaaataagtaatgcaaattgtttgaacgaaacaacaatccttgtggatacgatactctacttatcattttattac 7492337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 17 - 245
Target Start/End: Complemental strand, 4819096 - 4818861
Alignment:
Q  17 tgttatttaat-tccaacgaaataaataggggagattcaaagagtcctaaccat--tgcttacttttctgcaaccaaagc-agataacttgctctgttgc 112  Q
    ||||||||||| |||||| | ||||||||| | ||||| |||| ||||||||    ||||||||||||||||||||||   || ||||||||||| ||||    
T  4819096 tgttatttaatatccaacaatataaataggagggattcgaagaatcctaaccgcgctgcttacttttctgcaaccaaaaataggtaacttgctctattgc 4818997  T
Q  113 aa---acagataaaatttgcaatctttaacccttaactcttttattttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaatc 209  Q
    ||   | | | ||||||   ||||| |||||||||||||||||||||||||||||||||| ||||||||||||| ||| || |||||| |||| ||||||    
T  4818996 aatagataaaaaaaattaaaaatctctaacccttaactcttttattttatatcgtcaactaaaaataagtaacgtgaagtgcttggacgaaacgacaatc 4818897  T
Q  210 catgtggatacgatactctacttatcactttattac 245  Q
    | |||||||  |||||||||||||||||||||||||    
T  4818896 cctgtggatgtgatactctacttatcactttattac 4818861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 102 - 245
Target Start/End: Complemental strand, 4986723 - 4986580
Alignment:
Q  102 tgctctgttgcaaacagataaaatttgcaatctttaacccttaactcttttattttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaa 201  Q
    ||||||| | ||||||||||||| ||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||||||||  | ||| ||| |||    
T  4986723 tgctctgcttcaaacagataaaaattgcaatctctaacccttaacacttttattttttatcgtcaacttaaaataagtaacgcgagctatttagacgaaa 4986624  T
Q  202 caacaatccatgtggatacgatactctacttatcactttattac 245  Q
    | ||||||||||||| ||| |||||||||| | |||||||||||    
T  4986623 cgacaatccatgtgggtactatactctactcagcactttattac 4986580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 102 - 245
Target Start/End: Complemental strand, 4990821 - 4990678
Alignment:
Q  102 tgctctgttgcaaacagataaaatttgcaatctttaacccttaactcttttattttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaa 201  Q
    ||||||| | ||||||||||||| ||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||||||||  | ||| ||| |||    
T  4990821 tgctctgcttcaaacagataaaaattgcaatctctaacccttaacacttttattttttatcgtcaacttaaaataagtaacgcgagctatttagacgaaa 4990722  T
Q  202 caacaatccatgtggatacgatactctacttatcactttattac 245  Q
    | ||||||||||||| ||| |||||||||| | |||||||||||    
T  4990721 cgacaatccatgtgggtactatactctactcagcactttattac 4990678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 15 - 245
Target Start/End: Complemental strand, 31493179 - 31492955
Alignment:
Q  15 aatgttatttaattccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgctctgttgcaa 114  Q
    ||||||||||||||||||| |||| |||| | | | ||| |||| |||||||| |||||||| ||||| |||||||| ||  |||||  |||||||||||    
T  31493179 aatgttatttaattccaac-aaatgaataagaggg-ttcgaagaatcctaaccgttgcttacatttctacaaccaaaacaagtaactgactctgttgcaa 31493082  T
Q  115 acagataaaatttgcaatctttaacccttaactcttttattt--tatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaatccat 212  Q
    |||||||||| ||||| |||  |||||| |||||||||||||  | ||| ||    | |||||||||||  | |||||||||||| |||| |||||||||    
T  31493081 acagataaaaattgcactct--aaccctcaactcttttatttattttattgt----tcaaaataagtaaaacaaattgtttggacaaaacgacaatccat 31492988  T
Q  213 gtggatacgatactctacttatcactttattac 245  Q
    |||||||||||||||||||||||||||||||||    
T  31492987 gtggatacgatactctacttatcactttattac 31492955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 12 - 245
Target Start/End: Complemental strand, 5108824 - 5108591
Alignment:
Q  12 atgaatgttatttaat-tccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagc--agataacttgctctg 108  Q
    |||||| ||||||||| |||||| | ||||||||||| |||||||||| ||||||||  ||||||||||||||||||||||    ||  ||||||||||     
T  5108824 atgaattttatttaatatccaacaatataaatagggg-gattcaaagaatcctaaccgctgcttacttttctgcaaccaaaatcaagtaaacttgctctc 5108726  T
Q  109 ttgcaaacagataaaatttgcaa-tctttaacccttaactcttttattttatatcgtcaacttaaaa-taagtaacgcgaattgtttggaccaaacaaca 206  Q
    |||||||||||||||| ||| || ||| ||||| |  |||||||||||  ||||||||||||||||| |||||    |||||||||||||| |||| |||    
T  5108725 ttgcaaacagataaaaattgtaactctctaaccatatactcttttatt--atatcgtcaacttaaaaataagtgtt-cgaattgtttggacgaaacgaca 5108629  T
Q  207 atccatgtggatacgatactctacttatcactttattac 245  Q
    |||| |||||||||||||||||||||| |||||||||||    
T  5108628 atccttgtggatacgatactctactta-cactttattac 5108591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 69 - 244
Target Start/End: Original strand, 14195870 - 14196045
Alignment:
Q  69 ttgcttacttttctgcaaccaaagcagataacttgctctgttgcaaacagataaaatttgcaatct-ttaacccttaactcttttattt-tatatcgtca 166  Q
    |||||||| ||||||||| |||| |||||||||||||||||||||||||||||||| ||||||||| ||| || | ||||||||||||| ||| | || |    
T  14195870 ttgcttacatttctgcaatcaaaacagataacttgctctgttgcaaacagataaaaattgcaatctcttatccatcaactcttttatttatattttgtta 14195969  T
Q  167 acttaaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttatta 244  Q
    |    |||||||||||||||||||||||||| |||||| ||| | |||||||||| |||| |||||| ||||||||||    
T  14195970 a-acgaaataagtaacgcgaattgtttggacgaaacaataattcttgtggatacggtactttactta-cactttatta 14196045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 45 - 245
Target Start/End: Original strand, 1848101 - 1848301
Alignment:
Q  45 gggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataa-cttgctctgttgcaaacagataaaatttgcaa--tctttaaccc 141  Q
    ||||||||| |||| || |||||  |||||||||||||||||||||| ||| ||| ||||||||||| ||||||||||||| ||||||  ||| ||||||    
T  1848101 gggagattcgaagaatcataaccgctgcttacttttctgcaaccaaaacaggtaaacttgctctgtttcaaacagataaaaattgcaagctctctaaccc 1848200  T
Q  142 ttaactcttttattttatatcgtcaa-ctta---aaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcac 237  Q
    |||| |       ||||||||||||| ||||   ||||||||||||| |||||||||||| |||  |||||||  |||||||||||||| ||||||||||    
T  1848201 ttaatt-------tttatatcgtcaaacttacaaaaataagtaacgcaaattgtttggacgaaaggacaatcccagtggatacgatactgtacttatcac 1848293  T
Q  238 tttattac 245  Q
    ||||||||    
T  1848294 tttattac 1848301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 61 - 241
Target Start/End: Original strand, 9731516 - 9731697
Alignment:
Q  61 cctaaccattgcttacttttctgcaaccaaag-cagataacttgctctgttgcaaacagataaaatttgcaa-tctttaacccttaactcttttatttta 158  Q
    |||||||  ||||||||||| ||||||||||  ||| ||||||||| |||| || | |||||||| |||||| ||| |||  | ||||||||||||||||    
T  9731516 cctaaccgctgcttacttttatgcaaccaaaaacaggtaacttgctatgttacacatagataaaaattgcaaatctctaattcgtaactcttttatttta 9731615  T
Q  159 tatcgtcaa-cttaaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcacttta 241  Q
    |  | |||| || ||||||||||||||||||||||||||| |||| ||||||| ||||| ||||||||||||||||||||||||    
T  9731616 t--catcaaactaaaaataagtaacgcgaattgtttggacgaaacgacaatccttgtggttacgatactctacttatcacttta 9731697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 97 - 245
Target Start/End: Complemental strand, 1584715 - 1584569
Alignment:
Q  97 taacttgctctgttgcaaacagataaa-atttgcaatct-ttaacccttaactcttttattttatatcgtcaacttaaaataagtaacgcgaattgtttg 194  Q
    |||||| |||||||||| ||| ||||| ||||  ||||| |||||||||| || |||||||||||  ||||||||||||||||||||||||| ||||||     
T  1584715 taacttactctgttgcagacatataaatattttaaatctcttaacccttatct-ttttattttat--cgtcaacttaaaataagtaacgcgatttgttta 1584619  T
Q  195 gaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    ||| |||||||||||| |||||||||||||||| |||||||||||||||||    
T  1584618 gacgaaacaacaatccctgtggatacgatactc-acttatcactttattac 1584569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 72 - 245
Target Start/End: Complemental strand, 2564017 - 2563843
Alignment:
Q  72 cttacttttctgcaacc-aaagcagataa-cttgctctgttgcaaacagataaaatttgcaa-tctttaacccttaactcttttattttatatcgtcaac 168  Q
    ||||||||||||||| | ||||||| ||| ||||||||||||||||||||||||| || ||| ||| |||||||||  |||||||||  ||||||| |||    
T  2564017 cttacttttctgcaaactaaagcaggtaaacttgctctgttgcaaacagataaaaatttcaactctctaaccctta--tcttttatt--atatcgtgaac 2563922  T
Q  169 tta---aaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    |||   ||||||||||| | |||||||||||| |||| ||||||| |||||||||||||||||||||| |||||||||||    
T  2563921 ttacagaaataagtaacacaaattgtttggacgaaacgacaatccttgtggatacgatactctactta-cactttattac 2563843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 49 - 245
Target Start/End: Original strand, 8053940 - 8054132
Alignment:
Q  49 gattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataa-cttgctctgttgcaaacagataaaatttgcaa-tctttaacccttaac 146  Q
    |||||||||| |||||||   |||||||||||||||||||||| ||| ||| |||||| | ||||||| ||||||||||| ||| |||||      ||||    
T  8053940 gattcaaagaatcctaactgctgcttacttttctgcaaccaaaacaggtaaacttgctatattgcaaatagataaaatttacaagtcttt------taac 8054033  T
Q  147 tcttttattttatatcgtcaactta---aaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttatt 243  Q
    |||| | ||||||||||||||||||   |||||||||| | ||||||||||||   ||| ||||| |||||||||||||||||||| |||||||||||||    
T  8054034 tcttatcttttatatcgtcaacttacaaaaataagtaatgagaattgtttgga---aacgacaattcatgtggatacgatactctaattatcactttatt 8054130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 171 - 245
Target Start/End: Original strand, 8979006 - 8979080
Alignment:
Q  171 aaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||    
T  8979006 aaaataagtaatgcgaattgtttggacgaaacaacaatccatgtggatatgatactctacttatcactttattac 8979080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 245
Target Start/End: Original strand, 39273022 - 39273249
Alignment:
Q  19 ttatttaat-tccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagc-agataa-cttgctctgttgcaaa 115  Q
    ||||||||| |||||| | ||||| || |||||||| |||  ||||||||  ||||||||||||||||||||||   || ||| ||||||||||||||||    
T  39273022 ttatttaatatccaacaatataaacagaggagattcgaaggatcctaaccgctgcttacttttctgcaaccaaaaataggtaaacttgctctgttgcaaa 39273121  T
Q  116 cagataaaatttgcaatctt-taacccttaactcttttattttatatcgtcaa-ctta---aaataagtaacgcgaattgtttggaccaaacaacaatcc 210  Q
     |||| ||||||||||  || ||||||||||||       ||||||||||||| ||||   ||||||||||| | |||| ||||||| |||| |||||||    
T  39273122 tagattaaatttgcaactttataacccttaact-------tttatatcgtcaaacttacaaaaataagtaacacaaattatttggacgaaacgacaatcc 39273214  T
Q  211 atgtggatacgatactctacttatcactttattac 245  Q
    || || |||||||||||||||||||||||||||||    
T  39273215 atatgaatacgatactctacttatcactttattac 39273249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 112 - 245
Target Start/End: Complemental strand, 12181767 - 12181633
Alignment:
Q  112 caaacagataaaatttgcaa-tctttaaccctt-aactcttttattttatatcgtcaacttaaaataagtaacgcgaattgttt-ggaccaaacaacaat 208  Q
    ||||||| ||||| |||||| ||| |||||||| |||||||||| |||||  ||||||||||||||||||||| |||||||||| |||| |||| |||||    
T  12181767 caaacaggtaaaaattgcaaatctctaacccttcaactcttttaatttat--cgtcaacttaaaataagtaactcgaattgtttgggacgaaacgacaat 12181670  T
Q  209 ccatgtggatacgatactctacttatcactttattac 245  Q
     |||||||||||| |||||||||| ||||||||||||    
T  12181669 tcatgtggatacggtactctacttctcactttattac 12181633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 60 - 245
Target Start/End: Original strand, 3329545 - 3329732
Alignment:
Q  60 tcctaaccattgcttacttttctgcaaccaaagc--agataacttgctctgttgcaaacagataaaatttgcaa-tctttaacccttaactcttttattt 156  Q
    ||||||||  ||||||||||||||||||||||    ||  |||||||| |||||||||||||||||| |||||| ||| |||||||||  ||||| |||     
T  3329545 tcctaaccgctgcttacttttctgcaaccaaaaacaagtaaacttgctatgttgcaaacagataaaaattgcaactctctaaccctta--tctttcatta 3329642  T
Q  157 tatatcgtcaactta---aaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    ||  |  | ||||||   |||||||||||||  ||||||||||  |||| ||||||||||||||||||||||||||||||||||||||||||    
T  3329643 tacgt--taaacttacaaaaataagtaacgcagattgtttggatgaaacgacaatccatgtggatacgatactctacttatcactttattac 3329732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 12 - 134
Target Start/End: Complemental strand, 7397399 - 7397277
Alignment:
Q  12 atgaatgttatttaattccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaag-cagataacttgctctgtt 110  Q
    |||||||||||||||||||||| |||| ||||| ||  |||| |||| ||||||||  ||||||||||||||||||||||  ||||||||||| | ||||    
T  7397399 atgaatgttatttaattccaac-aaatgaatagagggaattcgaagaatcctaaccgctgcttacttttctgcaaccaaaaacagataacttgttttgtt 7397301  T
Q  111 gcaaacagataaaatttgcaatct 134  Q
    |||||||||||||| |||||||||    
T  7397300 gcaaacagataaaaattgcaatct 7397277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 71 - 197
Target Start/End: Complemental strand, 1584429 - 1584305
Alignment:
Q  71 gcttacttttctgcaaccaaagcagataacttgctctgttgcaaacagataaaatttgcaatctttaacccttaactcttttattttatatcgtcaactt 170  Q
    |||||||||||| ||||||||  || ||||||||| | ||||||| |||||||| ||||||||| ||||| ||||||||||||||||||||||||||       
T  1584429 gcttacttttctacaaccaaat-aggtaacttgcttt-ttgcaaaaagataaaaattgcaatctctaacctttaactcttttattttatatcgtcaaaac 1584332  T
Q  171 aaaataagtaacgcgaattgtttggac 197  Q
    |||||||||||||| |||| |||||||    
T  1584331 aaaataagtaacgcaaattatttggac 1584305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 171 - 245
Target Start/End: Complemental strand, 11803179 - 11803105
Alignment:
Q  171 aaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    ||||||||||||||||||||||||||| |||  ||||||| ||||||||||||||||||||||||||||||||||    
T  11803179 aaaataagtaacgcgaattgtttggacgaaaggacaatccctgtggatacgatactctacttatcactttattac 11803105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 49 - 245
Target Start/End: Original strand, 18368856 - 18369054
Alignment:
Q  49 gattcaaagagtcctaaccattgcttacttttctgcaaccaaa-gcagataacttgctctgttgcaaacagataaaatttgcaa---tctttaaccctta 144  Q
    ||||||| || |||||||| || ||||||||||| |||||||| |||| ||||||||| |||||||||||||||||| |||||    | | ||||||||     
T  18368856 gattcaaggaatcctaaccgtttcttacttttctacaaccaaaagcaggtaacttgctttgttgcaaacagataaaaattgcacgactttctaacccttt 18368955  T
Q  145 actcttttattttatatcgtcaactta---aaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcacttta 241  Q
    | |||||||| ||     |||||||||   |||||||||||  ||||||||||||| |||| ||||||| | ||||||| ||||||||||||||||||||    
T  18368956 a-tcttttatattt----gtcaacttataaaaataagtaactagaattgtttggacgaaacgacaatccctatggatacaatactctacttatcacttta 18369050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 69 - 245
Target Start/End: Original strand, 2350644 - 2350821
Alignment:
Q  69 ttgcttacttttctgcaaccaaagcagataacttgctctgttgcaaacagataaaatttgcaa-tctttaaccctt-aactcttttattttatatcgtca 166  Q
    |||||||||||| |||||||||| ||| ||| ||| | ||||| |||||||||||| ||| || ||| |||||||| |||| ||||||||||| |  |||    
T  2350644 ttgcttacttttttgcaaccaaaacaggtaatttgatgtgttgtaaacagataaaaattgaaaatctctaaccctttaactattttattttatct--tca 2350741  T
Q  167 a-cttaaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    | || ||||||  ||||||| ||| ||||||| |||| ||||||||||||||||||||| |||||||| || ||||||||    
T  2350742 aactaaaaatatttaacgcggattatttggacaaaacgacaatccatgtggatacgataatctacttagcagtttattac 2350821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 142 - 244
Target Start/End: Original strand, 8054457 - 8054562
Alignment:
Q  142 ttaactcttttattttatatcgtcaactta---aaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcact 238  Q
    ||||||||| | ||||||||||||||||||   |||||||||||  ||||||||||||| |||| ||||| | |||| ||||||||||||||||||||||    
T  8054457 ttaactcttatcttttatatcgtcaacttacaaaaataagtaacaagaattgtttggacgaaacgacaattcctgtgaatacgatactctacttatcact 8054556  T
Q  239 ttatta 244  Q
    ||||||    
T  8054557 ttatta 8054562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 17 - 124
Target Start/End: Original strand, 8293888 - 8293994
Alignment:
Q  17 tgttatttaattccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgctctgttgcaaac 116  Q
    ||||||||||||||||| |||| | | ||||| ||||||||| ||||||||| |||  || |||||||||||||| ||| ||||||||||||||||||||    
T  8293888 tgttatttaattccaac-aaatgagttggggatattcaaagaatcctaaccactgcgaacatttctgcaaccaaaacaggtaacttgctctgttgcaaac 8293986  T
Q  117 agataaaa 124  Q
    ||||||||    
T  8293987 agataaaa 8293994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 49 - 245
Target Start/End: Complemental strand, 8877643 - 8877446
Alignment:
Q  49 gattcaaagagtcctaaccattgcttact-tttctgcaaccaaagcagataa-cttgctctgttgcaaacagataaaatttgcaa---tctttaaccctt 143  Q
    |||||||||| ||||||||  |||||||| ||| ||||||||||  || ||| ||||||||||||||||||||||||| ||||||   | ||||||||||    
T  8877643 gattcaaagaatcctaaccgctgcttactatttttgcaaccaaaataggtaaacttgctctgttgcaaacagataaaaattgcaagtttttttaaccctt 8877544  T
Q  144 aactcttttattttatatcgtcaactta---aaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcacttt 240  Q
    ||||       ||||||  |||||||||   |||||||||  | ||||||||| ||| |||   ||||||||||||||||||||||||||||||||| ||    
T  8877543 aact-------tttatactgtcaacttataaaaataagtacagagaattgtttcgacaaaagggcaatccatgtggatacgatactctacttatcacctt 8877451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 35 - 153
Target Start/End: Complemental strand, 17829803 - 17829686
Alignment:
Q  35 aaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgctctgttgcaaacagataaaatttgcaatct 134  Q
    ||||||||||||| ||||| |||| || |||||| |||||| |||||| |||||||| ||| ||||||| |||||||||||||||||||| || |||||     
T  17829803 aaataaatagggg-gattcgaagaatcttaaccactgcttaattttctccaaccaaaacagttaacttgttctgttgcaaacagataaaaattacaatcg 17829705  T
Q  135 ttaacccttaactctttta 153  Q
     ||||||||||||| ||||    
T  17829704 ctaacccttaactccttta 17829686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 60 - 245
Target Start/End: Original strand, 11221054 - 11221238
Alignment:
Q  60 tcctaaccattgcttacttttctgcaaccaaagcagataacttgctctgttgcaaacagataaaatttgcaatcttt-aacccttaactcttttatt-tt 157  Q
    ||||||||| |||| || |||||  || |||| ||  |||||| |||||||||||||| |||||| ||||||| ||| |||||| |||||| || || ||    
T  11221054 tcctaaccactgctaacatttctaaaatcaaaacaagtaactttctctgttgcaaacaaataaaaattgcaattttttaaccctcaactctctttttatt 11221153  T
Q  158 atatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
     |||||| ||   |||||||||||||| ||||||||  || |||| ||||||| ||||||||| ||||||||||||||| ||||||||    
T  11221154 ttatcgttaa---aaaataagtaacgcaaattgtttacacgaaacgacaatccctgtggatacaatactctacttatcaatttattac 11221238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 171 - 244
Target Start/End: Original strand, 13759860 - 13759933
Alignment:
Q  171 aaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttatta 244  Q
    ||||||||||||||||| ||||||||| |||| ||||||| |||||||| ||||||||||||||||||||||||    
T  13759860 aaaataagtaacgcgaactgtttggacgaaacgacaatccttgtggatatgatactctacttatcactttatta 13759933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 70 - 245
Target Start/End: Original strand, 16297732 - 16297894
Alignment:
Q  70 tgcttacttttctgcaaccaaagc-agataacttgctctgttgcaaacagataaaatttgcaatctttaacccttaactcttttattttatatcgtcaac 168  Q
    ||||||||||||||||||||||   || |||||| |||||||||||||| |||||| ||||||| | ||||||||||||||||| |||                
T  16297732 tgcttacttttctgcaaccaaaaataggtaacttactctgttgcaaacatataaaaattgcaatttctaacccttaactcttttgttt------------ 16297819  T
Q  169 ttaaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
      ||||||||||| | ||||||||||||| |||  |||||||||||| |||||||| |||||||||||| |||||||    
T  16297820 --aaaataagtaatgtgaattgtttggacgaaatgacaatccatgtgaatacgataatctacttatcacattattac 16297894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 73 - 245
Target Start/End: Complemental strand, 19153493 - 19153323
Alignment:
Q  73 ttacttttctgcaaccaaag-cagataacttgctctgttgcaaacagataaaatttgcaat--ctttaacccttaactcttttattttatatcgtcaact 169  Q
    |||||||||||||||||||  ||| ||||||| | |||||||||||||||||| ||||||   | |||||||||| |||||| |||||||  ||||| ||    
T  19153493 ttacttttctgcaaccaaaaacaggtaacttgttatgttgcaaacagataaaaattgcaaatcccttaacccttatctcttt-attttat--cgtcacct 19153397  T
Q  170 taaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    ||||||||||||||||| || ||||||| |||| |||| ||||| ||||  ||||||| | |||||||||||||||    
T  19153396 taaaataagtaacgcgagttatttggacaaaacgacaa-ccatgcggatgtgatactc-atttatcactttattac 19153323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 73 - 245
Target Start/End: Complemental strand, 20752892 - 20752722
Alignment:
Q  73 ttacttttctgcaaccaaag-cagataacttgctctgttgcaaacagataaaatttgcaat--ctttaacccttaactcttttattttatatcgtcaact 169  Q
    |||||||||||||||||||  ||| ||||||| | |||||||||||||||||| ||||||   | |||||||||| |||||| |||||||  ||||| ||    
T  20752892 ttacttttctgcaaccaaaaacaggtaacttgttatgttgcaaacagataaaaattgcaaatcccttaacccttatctcttt-attttat--cgtcacct 20752796  T
Q  170 taaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    ||||||||||||||||| || ||||||| |||| |||| ||||| ||||  ||||||| | |||||||||||||||    
T  20752795 taaaataagtaacgcgagttatttggacaaaacgacaa-ccatgcggatgtgatactc-atttatcactttattac 20752722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 49 - 244
Target Start/End: Complemental strand, 20582477 - 20582285
Alignment:
Q  49 gattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataa-cttgctctgttgcaaacagataaaatttgc-aatctttaacccttaac 146  Q
    ||||| |||| |||||||   |||||||||||||||||||||| ||| ||| |||||||||||||||| |||||||| |||| |||||||     |||||    
T  20582477 gattcgaagaatcctaactgctgcttacttttctgcaaccaaaacaggtaaacttgctctgttgcaaatagataaaaattgcaaatcttt-----ttaac 20582383  T
Q  147 tcttttattttatatcgtcaactt---aaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttatt 243  Q
     |||   |||||||||||||||||   ||| ||||||||| ||||||| ||||  |||| || |||| ||||||||||||||   |||||||||||||||    
T  20582382 ccttaccttttatatcgtcaacttataaaattaagtaacgagaattgtatggaagaaacgacgatccctgtggatacgatac---acttatcactttatt 20582286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 142 - 244
Target Start/End: Original strand, 23099925 - 23100025
Alignment:
Q  142 ttaactcttttattttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcacttta 241  Q
    |||||||||||||||||  |  |||||| || ||||||  || ||||||||||||| |||| |||||| |||||||||||||||||||||||||||||||    
T  23099925 ttaactcttttattttactt--tcaactaaacataagtgtcgggaattgtttggacgaaacgacaatctatgtggatacgatactctacttatcacttta 23100022  T
Q  242 tta 244  Q
    |||    
T  23100023 tta 23100025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 172 - 245
Target Start/End: Original strand, 9864327 - 9864400
Alignment:
Q  172 aaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    ||||||||||||| |||||||| ||| |||| ||||||| |||||||| |||||||||||||||||||||||||    
T  9864327 aaataagtaacgcaaattgtttagacgaaacgacaatccttgtggatatgatactctacttatcactttattac 9864400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 78 - 245
Target Start/End: Complemental strand, 10648770 - 10648603
Alignment:
Q  78 tttctgcaaccaaagcagataacttgctctgttgcaaacagataaaatttgcaatct-ttaacccttaactctt--ttattttatatcgtcaacttaaaa 174  Q
    |||||||||||||| ||  ||||||||| |||||||||||||||||| ||||||||| |||||||| |||||||  || | |||| | ||     |||||    
T  10648770 tttctgcaaccaaaacatgtaacttgctttgttgcaaacagataaaaattgcaatctcttaaccctcaactctttattgtattattttgt---tctaaaa 10648674  T
Q  175 taagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    |||||||| |||||||||| ||  |||| ||||||| || | ||| ||||||||| |||||||||||||||    
T  10648673 taagtaacacgaattgtttagatgaaacgacaatccgtgcgcatatgatactctatttatcactttattac 10648603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 82 - 239
Target Start/End: Complemental strand, 4579285 - 4579128
Alignment:
Q  82 tgcaaccaaagcagataacttgctctgttgcaaacagataaaatttgcaatct-ttaacccttaactcttttattttat-atcgtcaacttaaaataagt 179  Q
    ||||||||||  || ||||||||| |||| ||||||||||||| ||| ||||| |||||||| |||| ||||||||||| ||  |  ||| ||| |||||    
T  4579285 tgcaaccaaaataggtaacttgctatgttacaaacagataaaaattgtaatctcttaaccctaaact-ttttattttattattttggactcaaa-taagt 4579188  T
Q  180 aacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactt 239  Q
    ||| |||||||||||||| |||  ||||||  | ||||||||||||||||||||||||||    
T  4579187 aacacgaattgtttggacaaaaagacaatctctttggatacgatactctacttatcactt 4579128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 172 - 245
Target Start/End: Complemental strand, 9500542 - 9500469
Alignment:
Q  172 aaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    |||||||||| ||||||||||| ||| |||||||||||| |||||||||||||||||| | ||||| |||||||    
T  9500542 aaataagtaatgcgaattgtttagacgaaacaacaatccttgtggatacgatactctaatgatcacattattac 9500469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 172 - 228
Target Start/End: Complemental strand, 6005934 - 6005878
Alignment:
Q  172 aaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactct 228  Q
    |||||||||||| |||||||||||||||||| ||||||||||||||||| |||||||    
T  6005934 aaataagtaacgtgaattgtttggaccaaacgacaatccatgtggatacaatactct 6005878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 109 - 245
Target Start/End: Complemental strand, 12329843 - 12329707
Alignment:
Q  109 ttgcaaacagataaaatttgcaatctt-taacccttaactcttttattttatatcgtcaacttaaaa-taagtaacgcgaattgtttggaccaaacaaca 206  Q
    |||||||||||||| | |||||| ||| |||| | ||||  |||||||  ||||||||||||||||| ||||||||||| ||| ||||| | |||| |||    
T  12329843 ttgcaaacagataataattgcaagcttctaactcctaacatttttatt--atatcgtcaacttaaaaataagtaacgcggattatttgggcaaaacgaca 12329746  T
Q  207 atccatgtggatacgatactctacttatcactttattac 245  Q
    |||| ||||||||| |||||||| |||||| ||| ||||    
T  12329745 atccttgtggatactatactctatttatcaatttcttac 12329707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 49 - 131
Target Start/End: Complemental strand, 13418743 - 13418660
Alignment:
Q  49 gattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataa-cttgctctgttgcaaacagataaaatttgcaa 131  Q
    |||||||||| ||||||||  |||||||||| |||||| |||| ||| ||| ||||||||||||||||||||||||| ||||||    
T  13418743 gattcaaagaatcctaaccgctgcttactttgctgcaatcaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa 13418660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 171 - 245
Target Start/End: Complemental strand, 17203122 - 17203049
Alignment:
Q  171 aaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    ||||||||||||||| ||||||||||| |||| |||||||  ||| |||||||||||||||||| ||||||||||    
T  17203122 aaaataagtaacgcggattgtttggacgaaacgacaatccccgtgaatacgatactctacttat-actttattac 17203049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 49 - 159
Target Start/End: Complemental strand, 9131132 - 9131019
Alignment:
Q  49 gattcaaagagtcctaaccattgcttacttttctgcaaccaaag-cagataacttgctctgttgcaaacagataaaatttgc-aatctttaa-cccttaa 145  Q
    ||||| |||| ||||||||   |||||||||| ||||||||||  ||| ||||||||||| ||||||||| |||||| |||| ||||| ||| |||||||    
T  9131132 gattcgaagaatcctaaccgcagcttacttttttgcaaccaaaaacagttaacttgctctattgcaaacaaataaaaattgcaaatctctaaccccttaa 9131033  T
Q  146 ctcttttattttat 159  Q
    ||||||||||||||    
T  9131032 ctcttttattttat 9131019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 172 - 245
Target Start/End: Complemental strand, 9916664 - 9916591
Alignment:
Q  172 aaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    ||||||||||| |  |||||||||   |||| ||||||||||||||||||||||||||||||| ||||||||||    
T  9916664 aaataagtaacacatattgtttggttgaaactacaatccatgtggatacgatactctacttattactttattac 9916591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 172 - 245
Target Start/End: Complemental strand, 9924576 - 9924503
Alignment:
Q  172 aaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    ||||||||||| |  |||||||||   |||| ||||||||||||||||||||||||||||||| ||||||||||    
T  9924576 aaataagtaacacatattgtttggttgaaactacaatccatgtggatacgatactctacttattactttattac 9924503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 172 - 245
Target Start/End: Original strand, 10584487 - 10584560
Alignment:
Q  172 aaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    ||||||||||| ||||||||||  |  |||| ||||||||||||||||||||||| | ||||||||||||||||    
T  10584487 aaataagtaacacgaattgtttctatgaaacgacaatccatgtggatacgatactttgcttatcactttattac 10584560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 172 - 245
Target Start/End: Complemental strand, 10937700 - 10937627
Alignment:
Q  172 aaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    |||||||||| | ||||||||||    |||| ||||||||||||||||||||||| ||||||||||||||||||    
T  10937700 aaataagtaatgtgaattgtttgattgaaacgacaatccatgtggatacgatactatacttatcactttattac 10937627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 172 - 245
Target Start/End: Complemental strand, 18467549 - 18467476
Alignment:
Q  172 aaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    |||||||||||   |||||||| ||| |||| ||||||||||||||||| ||||| ||||||||||||||||||    
T  18467549 aaataagtaacataaattgtttagacgaaacgacaatccatgtggatacaatactttacttatcactttattac 18467476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 172 - 241
Target Start/End: Original strand, 22339312 - 22339381
Alignment:
Q  172 aaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcacttta 241  Q
    |||||||||| ||||||||||||||| |||| ||||||| || |||| ||||||| ||||||||||||||    
T  22339312 aaataagtaaggcgaattgtttggacgaaacgacaatccttgcggatgcgatactttacttatcacttta 22339381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 154 - 240
Target Start/End: Complemental strand, 13418653 - 13418564
Alignment:
Q  154 ttttatatcgtcaacttaaaa---taagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcacttt 240  Q
    ||||||| |||||||||||||   |||||||||  || ||||||||| |||  ||||||| | |||||||||||||||||||||||||||    
T  13418653 ttttataccgtcaacttaaaaaaataagtaacgacaaatgtttggacgaaaggacaatccctatggatacgatactctacttatcacttt 13418564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 171 - 245
Target Start/End: Original strand, 16059021 - 16059096
Alignment:
Q  171 aaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctactta-tcactttattac 245  Q
    ||||||||||||   |||||||||||| |||  |||||||||||||||||||||||||||||| | ||||||||||    
T  16059021 aaaataagtaactaaaattgtttggacgaaaggacaatccatgtggatacgatactctacttactaactttattac 16059096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 154 - 244
Target Start/End: Complemental strand, 17077247 - 17077154
Alignment:
Q  154 ttttatatcgtcaactta---aaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttatta 244  Q
    ||||||| ||||||||||   |||||||||||  ||||||||||||| |||| |||||||   ||||||| ||||||||| |||||||||||||    
T  17077247 ttttataccgtcaacttacaaaaataagtaacatgaattgtttggacgaaacgacaatccccatggatacaatactctacctatcactttatta 17077154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 171 - 245
Target Start/End: Complemental strand, 4449079 - 4449005
Alignment:
Q  171 aaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    ||||||||||||  ||||||||||||| |||  ||| ||| ||||||||| ||||| ||||||||||||||||||    
T  4449079 aaaataagtaacaagaattgtttggacaaaaggacagtccctgtggatacaatactttacttatcactttattac 4449005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 72 - 126
Target Start/End: Complemental strand, 6006136 - 6006082
Alignment:
Q  72 cttacttttctgcaaccaaagcagataacttgctctgttgcaaacagataaaatt 126  Q
    ||||||||||||| |||||| ||| |||||| |||||||||||||||||||||||    
T  6006136 cttacttttctgccaccaaaacaggtaacttactctgttgcaaacagataaaatt 6006082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 171 - 245
Target Start/End: Complemental strand, 13277602 - 13277528
Alignment:
Q  171 aaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    ||||||| ||||  |||||||| |||| |||  |||||||||||||||||||||||||| |||||||| ||||||    
T  13277602 aaaataattaacaagaattgttcggacgaaaggacaatccatgtggatacgatactctatttatcactgtattac 13277528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 49 - 134
Target Start/End: Complemental strand, 140337 - 140252
Alignment:
Q  49 gattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgctctgttgcaaacagataaaatttgcaatct 134  Q
    |||||||||| |||| |||  | || || |||||||||| ||| ||| |||||||||||||||||||||||||||| | |||||||    
T  140337 gattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaacttgctctgttgcaaacagataaaaatggcaatct 140252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 76
Target Start/End: Complemental strand, 4986790 - 4986725
Alignment:
Q  12 atgaatgttatttaat-tccaacgaaataaataggggagattcaaagagtcctaaccattgcttac 76  Q
    |||||||||||||||| |||||| ||||||||||||| ||||||||||||| ||| | ||||||||    
T  4986790 atgaatgttatttaatatccaacaaaataaataggggggattcaaagagtcataatcgttgcttac 4986725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 76
Target Start/End: Complemental strand, 4990888 - 4990823
Alignment:
Q  12 atgaatgttatttaat-tccaacgaaataaataggggagattcaaagagtcctaaccattgcttac 76  Q
    |||||||||||||||| |||||| ||||||||||||| ||||||||||||| ||| | ||||||||    
T  4990888 atgaatgttatttaatatccaacaaaataaataggggggattcaaagagtcataatcgttgcttac 4990823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 233
Target Start/End: Complemental strand, 6042703 - 6042497
Alignment:
Q  17 tgttatttaat-tccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagca-gataacttgctctgttgcaa 114  Q
    ||||||||||| |||||| | ||||||||||||  |||||||| ||||||||  |||||| |||||||||||||||  | | |||  | |||||||||||    
T  6042703 tgttatttaatatccaacaatataaatagggga--ttcaaagaatcctaaccgctgcttatttttctgcaaccaaaaaaaggtaaacttctctgttgcaa 6042606  T
Q  115 acagataaaatttgcaatctttaacccttaactcttttattttatatcgtcaa-cttaaaataagtaacgcgaattgtttggaccaaacaacaatccatg 213  Q
    ||| |||||| ||||||  | ||         |||||||||  ||| |||||| || |||||||||||||| ||||||||| || |||| |||| |  ||    
T  6042605 acatataaaaattgcaacatcta---------tcttttatt--ataccgtcaaactaaaaataagtaacgcaaattgtttgaacgaaacgacaacctctg 6042517  T
Q  214 tggatacgatactctactta 233  Q
    ||||||||||||||||||||    
T  6042516 tggatacgatactctactta 6042497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 245
Target Start/End: Complemental strand, 1872885 - 1872810
Alignment:
Q  170 taaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    ||||||||||||| ||||||||||| |  |||| ||||   |||||||||||||||||||||||||| | ||||||    
T  1872885 taaaataagtaacacgaattgtttgtatgaaacgacaacttatgtggatacgatactctacttatcattgtattac 1872810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 245
Target Start/End: Complemental strand, 5530119 - 5530046
Alignment:
Q  172 aaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    ||||||||||| | |||||||||||| |||| | ||||  |||||||||||| || ||||||||| ||||||||    
T  5530119 aaataagtaacacaaattgtttggacgaaacgaaaatctctgtggatacgatgctttacttatcattttattac 5530046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 204 - 245
Target Start/End: Complemental strand, 5797577 - 5797536
Alignment:
Q  204 acaatccatgtggatacgatactctacttatcactttattac 245  Q
    ||||| ||||||||||||||||||||||||| ||||||||||    
T  5797577 acaattcatgtggatacgatactctacttattactttattac 5797536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 233
Target Start/End: Complemental strand, 9245279 - 9245218
Alignment:
Q  172 aaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctactta 233  Q
    ||||||||||| ||||||||||  || |||  ||||||||||||||||||||||||| ||||    
T  9245279 aaataagtaacacgaattgtttaaacgaaatgacaatccatgtggatacgatactctgctta 9245218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 245
Target Start/End: Complemental strand, 16306792 - 16306719
Alignment:
Q  172 aaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    |||||||||| || |||||||| ||  |||  | ||||| ||| ||||||||||||||||||||||||||||||    
T  16306792 aaataagtaatgcaaattgtttagatgaaatgataatccttgtagatacgatactctacttatcactttattac 16306719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 245
Target Start/End: Complemental strand, 18449340 - 18449267
Alignment:
Q  172 aaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    ||||||||||||| ||||||||||   |||| ||||||| | ||||||||||| | ||||| ||||||||||||    
T  18449340 aaataagtaacgccaattgtttggctgaaacgacaatccctatggatacgatattatacttctcactttattac 18449267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 244
Target Start/End: Complemental strand, 18466103 - 18466031
Alignment:
Q  172 aaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttatta 244  Q
    ||||||||||| | ||||||||||   |||| | ||||| | |||||||| ||||||||||||||||||||||    
T  18466103 aaataagtaacacaaattgtttggctgaaacgagaatccctatggatacgttactctacttatcactttatta 18466031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 61 - 131
Target Start/End: Complemental strand, 17077325 - 17077254
Alignment:
Q  61 cctaaccattgcttacttttctgcaaccaaagcagataa-cttgctctgttgcaaacagataaaatttgcaa 131  Q
    |||||||  ||||||||||||||||| |||| ||| ||| ||| |||| |||||||||||||||| ||||||    
T  17077325 cctaaccgctgcttacttttctgcaaacaaaacaggtaaacttactctattgcaaacagataaaaattgcaa 17077254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 210 - 245
Target Start/End: Complemental strand, 21227239 - 21227204
Alignment:
Q  210 catgtggatacgatactctacttatcactttattac 245  Q
    ||||| ||||||||||||||||||||||||||||||    
T  21227239 catgtagatacgatactctacttatcactttattac 21227204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 245
Target Start/End: Complemental strand, 7397266 - 7397221
Alignment:
Q  199 aaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    |||| |||||||||||||||||||||||||| ||| |||||||||||    
T  7397266 aaacgacaatccatgtggatacgatactctagtta-cactttattac 7397221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 244
Target Start/End: Complemental strand, 21230479 - 21230338
Alignment:
Q  101 ttgctctgttgcaaacagataaaatttgcaatctttaa-cccttaactcttttattttatatcgtcaacttaaaataagtaacgcgaattgtttggacca 199  Q
    |||||||||| ||||||||| || ||||||| || ||| |||||||||| ||||| |||| | ||   |   ||||||||||| | ||||| || ||| |    
T  21230479 ttgctctgttacaaacagattaactttgcaaactctaaacccttaactcatttatattattttgttctc---aaataagtaacacaaattgcttagacga 21230383  T
Q  200 aacaacaatccatgtggatacgatactctacttatcactttatta 244  Q
    ||| | ||||| | || |||||||||||||||||||| |||||||    
T  21230382 aacgataatccctatgaatacgatactctacttatcattttatta 21230338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 206 - 243
Target Start/End: Original strand, 7748121 - 7748157
Alignment:
Q  206 aatccatgtggatacgatactctacttatcactttatt 243  Q
    |||||||||||||||||||||| |||||||||||||||    
T  7748121 aatccatgtggatacgatactc-acttatcactttatt 7748157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 188 - 241
Target Start/End: Original strand, 14755147 - 14755200
Alignment:
Q  188 ttgtttggaccaaacaacaatccatgtggatacgatactctacttatcacttta 241  Q
    |||||| ||| |||||||||| | |||||||| |||||||||||| ||||||||    
T  14755147 ttgtttagacgaaacaacaatacttgtggatatgatactctacttctcacttta 14755200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 245
Target Start/End: Complemental strand, 18495471 - 18495398
Alignment:
Q  172 aaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    ||||||||||| | |||||||| ||| |||| |||||||   |||||||  |||| ||||||||||||||||||    
T  18495471 aaataagtaacacaaattgtttagacgaaacgacaatccccatggatacattactttacttatcactttattac 18495398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 206 - 243
Target Start/End: Complemental strand, 18661654 - 18661617
Alignment:
Q  206 aatccatgtggatacgatactctacttatcactttatt 243  Q
    ||||| ||||||||| ||||||||||||||||||||||    
T  18661654 aatccttgtggatacaatactctacttatcactttatt 18661617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 244
Target Start/End: Original strand, 21912481 - 21912553
Alignment:
Q  172 aaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttatta 244  Q
    |||||||||||| | ||||||| |   |||| |||||||  || |||||||||||| ||||||||||||||||    
T  21912481 aaataagtaacgtggattgttttgttgaaacgacaatccccgtagatacgatactcaacttatcactttatta 21912553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 158; Significance: 3e-84; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 12 - 245
Target Start/End: Complemental strand, 32085720 - 32085488
Alignment:
Q  12 atgaatgttatttaattccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgctctgttg 111  Q
    ||||||||||||||| |||||| ||||||||||||| |||| ||||||||||||||  |||||||||||||||||||||| ||| |||||||||||||||    
T  32085720 atgaatgttatttaaatccaacaaaataaatagggg-gatttaaagagtcctaaccgctgcttacttttctgcaaccaaaccaggtaacttgctctgttg 32085622  T
Q  112 caaacagataaaatttgcaatctttaacccttaactcttttattttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaatcca 211  Q
    ||||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| |||  ||||| ||| |||| ||||||||    
T  32085621 caaacagataaaaattgcaatctctaactcttaactcttttattttatatcgtcaacttaaaataagtaacacgagctgtttagacgaaacgacaatcca 32085522  T
Q  212 tgtggatacgatactctacttatcactttattac 245  Q
    |||||||| |||||||||||||||||||||||||    
T  32085521 tgtggatatgatactctacttatcactttattac 32085488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 12 - 245
Target Start/End: Original strand, 20174478 - 20174709
Alignment:
Q  12 atgaatgttatttaattccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgctctgttg 111  Q
    |||||||||||||||||||||  ||| |||||| || ||||| |||||| ||||||  |||||||||||||   |||||| ||| ||| |||||||||||    
T  20174478 atgaatgttatttaattccaaaaaaaaaaatagagg-gattcgaagagtgctaaccgctgcttacttttcttttaccaaa-caggtaatttgctctgttg 20174575  T
Q  112 caaacagataaaatttgcaatctttaacccttaactcttttattttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaatcca 211  Q
    ||||||||||||| || |||||| |||||||||||| |||||||||||||| |||||||||||||||||||  ||||||||||||| |||| ||||||||    
T  20174576 caaacagataaaaattccaatctctaacccttaactattttattttatatcatcaacttaaaataagtaacatgaattgtttggacgaaacgacaatcca 20174675  T
Q  212 tgtggatacgatactctacttatcactttattac 245  Q
    |||||| | |||||||||||||||||||||||||    
T  20174676 tgtggaaatgatactctacttatcactttattac 20174709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 12 - 244
Target Start/End: Complemental strand, 29027755 - 29027522
Alignment:
Q  12 atgaatgttatttaat-tccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgctctgtt 110  Q
    |||||||||||||| | || |||  |||||||||||  |||||| | ||| |||||| ||| || |||||||||||||||| ||| | ||||||||| ||    
T  29027755 atgaatgttatttattatctaacacaataaatagggtggattcacatagttctaaccgttgttttcttttctgcaaccaaatcaggtcacttgctctctt 29027656  T
Q  111 gcaaacagataaaatttgcaatctttaacccttaactcttttattttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaatcc 210  Q
    |||||||||||||| ||||||||| ||||||||| ||||||||||| |||||| |||||||||||||||||||| |||| |||| || |||||||||| |    
T  29027655 gcaaacagataaaaattgcaatctctaacccttatctcttttatttaatatcggcaacttaaaataagtaacgcaaattatttgcacaaaacaacaattc 29027556  T
Q  211 atgtggatacgatactctacttatcactttatta 244  Q
    ||||| |||| ||||||| || ||||||||||||    
T  29027555 atgtgaatacaatactctgctcatcactttatta 29027522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 17 - 245
Target Start/End: Complemental strand, 25618809 - 25618581
Alignment:
Q  17 tgttatttaat-tccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataa-cttgctctgttgcaa 114  Q
    ||||||||||| |||||| | |||||| |||| ||||| |||| | | ||||  |||||||||||||||||||||| ||| ||| ||| |||||||||||    
T  25618809 tgttatttaatatccaacaatataaatggggg-gattcgaagaattcgaaccgctgcttacttttctgcaaccaaaacaggtaaactttctctgttgcaa 25618711  T
Q  115 acagataaaatttgcaa-tctttaacccttaactcttttattttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaatccatg 213  Q
    |||||||||| |||||| ||| ||||  || |||||||||||  |||||||||||| ||||||||| ||||||||||||| ||| |||| ||||||||||    
T  25618710 acagataaaaattgcaaatctctaacttttcactcttttatt--atatcgtcaactaaaaataagttacgcgaattgtttagacgaaacgacaatccatg 25618613  T
Q  214 tggatacgatactctacttatcactttattac 245  Q
    |||||| |||||||||||||||||||||||||    
T  25618612 tggatatgatactctacttatcactttattac 25618581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 15 - 239
Target Start/End: Original strand, 25885305 - 25885528
Alignment:
Q  15 aatgttatttaattccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgctctgttgcaa 114  Q
    |||||||||||||| |||| ||||| |||||||  ||||||||||||||||||| ||||||||||||| ||||| || ||| |||| | |||| || | |    
T  25885305 aatgttatttaatttcaacaaaatagatagggggaattcaaagagtcctaaccactgcttacttttctacaacc-aaccaggtaaccttctctattccga 25885403  T
Q  115 acagataaaatttgcaatctttaacccttaactcttttattttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaatccatgt 214  Q
    |||||||||| ||| ||| | ||||||||||||||||||||||||||||||    ||||||||||||| | |||||||||||| |||| ||||| | |||    
T  25885404 acagataaaaattgaaatatctaacccttaactcttttattttatatcgtcggaataaaataagtaacacaaattgtttggacgaaacgacaattcttgt 25885503  T
Q  215 ggatacgatactctacttatcactt 239  Q
    |||||||||||| | ||||||||||    
T  25885504 ggatacgatactattcttatcactt 25885528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 28 - 245
Target Start/End: Original strand, 27908975 - 27909193
Alignment:
Q  28 tccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataa-cttgctctgttgcaaacagataaaatt 126  Q
    |||||| | ||||||||||| ||||| |||| ||||||||  |||||| ||||||||||||||| ||| ||| ||||||||||||||||||||||||| |    
T  27908975 tccaacaatataaataggggggattcgaagaatcctaaccgctgcttaattttctgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaat 27909074  T
Q  127 tgcaatctt-taacccttaactcttttattttatatcgtcaa-ctta---aaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacg 221  Q
    |||||  || ||||||||     ||   |||||||||||||| ||||   |||||||||||| ||||||||||||  |||||| || |||||||||||||    
T  27909075 tgcaacgttctaaccctt-----ttaacttttatatcgtcaaacttacaaaaataagtaacgtgaattgtttggatgaaacaataacccatgtggatacg 27909169  T
Q  222 atactctacttatcactttattac 245  Q
    ||||||||||||||||||||||||    
T  27909170 atactctacttatcactttattac 27909193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 17 - 245
Target Start/End: Original strand, 29719077 - 29719305
Alignment:
Q  17 tgttatttaattccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaa-gcagat-aacttgctctgttgcaa 114  Q
    |||||||||||| | |  |||||||||| || ||||| |||| |||||||   ||||||||||||||||||||||  ||| | ||||||||||||||||     
T  29719077 tgttatttaatttctaacaaataaatagaggggattcgaagaatcctaactgctgcttacttttctgcaaccaaacacaggtaaacttgctctgttgcat 29719176  T
Q  115 acagataaaatttgcaa-tctttaacccttaactcttttattttatatcgtc-aacttaaaataagtaacgcgaattgtttggaccaaacaacaatccat 212  Q
    ||| |||||| |||||| ||| |||||||||  | |||||  ||||| |||| |||| |||||||||||||||||||||||| || |||| ||||||| |    
T  29719177 acatataaaaattgcaactctctaaccctta--tatttta--ttataccgtcaaactaaaaataagtaacgcgaattgtttgaacgaaacgacaatcctt 29719272  T
Q  213 gtggatacgatactctacttatcactttattac 245  Q
    |||||||||||| ||||||||||||||||||||    
T  29719273 gtggatacgataatctacttatcactttattac 29719305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 17 - 244
Target Start/End: Original strand, 11382600 - 11382826
Alignment:
Q  17 tgttatttaat-tccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaag-cagataacttgctctgttgcaa 114  Q
    ||||||||||| |||||| |||||||||||||   ||| |||| || |||| |||| |||||||||| |||| |||  ||  ||||||||||||||||||    
T  11382600 tgttatttaatatccaac-aaataaataggggg--ttcgaagaatcataacaattgtttacttttctacaacaaaaaacaagtaacttgctctgttgcaa 11382696  T
Q  115 acagataaaatttgcaa-tctttaacccttaactcttttattttatatcgtcaa-cttaaaataagtaacgcgaattgtttggaccaaacaacaatccat 212  Q
    ||||||||||||||||| ||| ||||  ||||||||||||| ||||  |||||| || ||||||||||||||||||| ||||||  |||  ||||| |||    
T  11382697 acagataaaatttgcaaatctctaacttttaactcttttatcttat--cgtcaaactaaaaataagtaacgcgaattatttggatgaaaatacaattcat 11382794  T
Q  213 gtggatacgatactctacttatcactttatta 244  Q
    ||||||| ||||||||||||||||||||||||    
T  11382795 gtggatatgatactctacttatcactttatta 11382826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 37 - 245
Target Start/End: Complemental strand, 15339472 - 15339263
Alignment:
Q  37 ataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaag-cagataa-cttgctctgttgcaaacagataaaatttgcaa-tc 133  Q
    |||||||| || ||||  |||| |||||||   |||||||||||||||||| |||  ||||||| |||||||||||||||||| |||||| |||||| ||    
T  15339472 ataaatagaggggatttgaagaatcctaactgctgcttacttttctgcaacaaaaaacagataaacttgctctgttgcaaacaaataaaaattgcaactc 15339373  T
Q  134 tttaacccttaactcttttattttatatcgtcaacttaaaa--taagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctact 231  Q
    | |||||||||  |||||||||  ||||| | |||||| ||  |||||||||| |||||||||||| |||| |||||||||||||||| |||||||||||    
T  15339372 tctaaccctta--tcttttatt--atatccttaacttacaaagtaagtaacgctaattgtttggacgaaacgacaatccatgtggatatgatactctact 15339277  T
Q  232 tatcactttattac 245  Q
    | ||||||||||||    
T  15339276 tttcactttattac 15339263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 15 - 232
Target Start/End: Original strand, 28606021 - 28606239
Alignment:
Q  15 aatgttatttaat-tccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaag-cagataacttgctctgttgc 112  Q
    ||||||||||| | |||||| | |||||| |||| |||| ||||| |||||||  ||| || ||||| |||||| |||  ||| ||||||| | ||| |     
T  28606021 aatgttatttattatccaacaatataaatggggg-gatttaaagattcctaacagttgtttccttttatgcaacaaaaaacaggtaacttgttatgtcgt 28606119  T
Q  113 aaacagataaaatttgcaatctttaacccttaactcttttattttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaatccat 212  Q
    ||||| |||||| ||||||||| ||||||||  |||||||||| |||||||||||||||||||||||||||| |  ||||| ||| |||| |||||||      
T  28606120 aaacaaataaaaattgcaatctctaacccttgtctcttttattatatatcgtcaacttaaaataagtaacgccagctgtttagacgaaacgacaatccta 28606219  T
Q  213 gtggatacgatactctactt 232  Q
    ||||||||||||||||||||    
T  28606220 gtggatacgatactctactt 28606239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 35 - 244
Target Start/End: Complemental strand, 13776575 - 13776365
Alignment:
Q  35 aaataaataggggagattcaaagagtcct--aaccattgcttacttttctgcaaccaaag-cagataa-cttgctctgttgcaaacagataaaatttgca 130  Q
    ||||||||||||| ||||| |||| ||||  |||| ||| ||||||||||| ||| |||  ||| ||| ||| ||||||||||||||||||||| |||||    
T  13776575 aaataaataggggcgattcgaagaatcctctaaccgttg-ttacttttctggaacaaaaaacaggtaatcttactctgttgcaaacagataaaaattgca 13776477  T
Q  131 a-tct-ttaacccttaactcttttattttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactct 228  Q
    | ||| |||||||||| |||||| |||||||  |||||||||||||||||||||| |  |||||||||| |||  |||||| |||||||||||||||||     
T  13776476 aatctcttaacccttatctcttt-attttat--cgtcaacttaaaataagtaacgtgggttgtttggacgaaatgacaatctatgtggatacgatactc- 13776381  T
Q  229 acttatcactttatta 244  Q
    ||||||||||||||||    
T  13776380 acttatcactttatta 13776365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 17 - 245
Target Start/End: Complemental strand, 17349603 - 17349382
Alignment:
Q  17 tgttatttaat-tccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagc--agataacttgctctgttgca 113  Q
    ||||||||||| |||||| | |||||||| || ||||| |||| | || |||  ||||||||||| ||||||||||    ||  ||||||||||||||||    
T  17349603 tgttatttaatatccaacaatataaatagaggggattcgaagaattctgaccgctgcttacttttttgcaaccaaaaacaagtaaacttgctctgttgca 17349504  T
Q  114 aacagataaaatttgcaatctttaacccttaactcttttattttatatcgtcaactta--aaataagtaacgcgaattgtttggaccaaacaacaatcca 211  Q
    ||||||||||| ||||||       ||||||  |||||||||  ||||||||||||||  |||||||||||||||| ||||||||| |||| ||||||      
T  17349503 aacagataaaaattgcaa-------ccctta--tcttttatt--atatcgtcaacttacaaaataagtaacgcgaaatgtttggacgaaacgacaatctt 17349415  T
Q  212 tgtggatacgatactctacttatcactttattac 245  Q
    |||||||||||||||||||||| |||||||||||    
T  17349414 tgtggatacgatactctactta-cactttattac 17349382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 17890194 - 17890076
Alignment:
Q  12 atgaatgttatttaattccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgctctgttg 111  Q
    |||||||||||||||||||||| |||| |||||||| |||| ||||| || ||| | |||||||| |||||||||||||| ||| |||||||||||||||    
T  17890194 atgaatgttatttaattccaac-aaatgaataggggggattgaaagaatcttaatcgttgcttacatttctgcaaccaaaacaggtaacttgctctgttg 17890096  T
Q  112 caaacagataaaatttgcaa 131  Q
    |||||| |||||| ||||||    
T  17890095 caaacatataaaaattgcaa 17890076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 98 - 245
Target Start/End: Original strand, 45621809 - 45621955
Alignment:
Q  98 aacttgctctgttgcaaacagataaaatttgcaatctttaacccttaac-tcttttattttatatcgt-caacttaaaataagtaacgcgaattgtttgg 195  Q
    |||||||| |||||||||||||||||| || ||| || ||||||||| | ||||||||||||| | || |||   |||||||||||| ||||||||||||    
T  45621809 aacttgctatgttgcaaacagataaaaattacaaactctaacccttatcatcttttattttattttgttcaa---aaaataagtaacacgaattgtttgg 45621905  T
Q  196 accaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    || |||| ||||||| ||| ||||||||||||||||| ||||||||||||    
T  45621906 acgaaacgacaatccttgtagatacgatactctacttctcactttattac 45621955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 12 - 245
Target Start/End: Original strand, 23011605 - 23011836
Alignment:
Q  12 atgaatgttatttaattccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgctctgttg 111  Q
    ||||||| |||||||||||| | ||||| || |||| ||||  ||||||| |||||  || |||||||||| ||||||||  || ||||||| | |||||    
T  23011605 atgaatggtatttaattccagcaaaatagatggggg-gatttgaagagtcttaaccgctggttacttttctacaaccaaat-aggtaacttgatatgttg 23011702  T
Q  112 caaacagataaaatttgcaatctttaacccttaactcttttatt-ttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaatcc 210  Q
     ||| |||||||| || |||| | |||||||||||||||||||| |||||||||| |    |||||| |||||| |||||||| ||| |||| |||||||    
T  23011703 gaaatagataaaaatttcaatatctaacccttaactcttttattattatatcgtctagactaaataaataacgcaaattgtttagacaaaacgacaatcc 23011802  T
Q  211 atgtggatacgatactctacttatcactttattac 245  Q
     ||||||||| ||| |||||||| |||||||||||    
T  23011803 ttgtggatacaataatctactta-cactttattac 23011836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 12 - 141
Target Start/End: Original strand, 23933388 - 23933515
Alignment:
Q  12 atgaatgttatttaattccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgctctgttg 111  Q
    |||||||||||||||||||| | |||| |||||||| |||||||||| ||||||||  ||||||||||| || ||||||| ||  |||||||||||||||    
T  23933388 atgaatgttatttaattccagc-aaatgaatagggg-gattcaaagaatcctaaccgctgcttacttttgtgaaaccaaaccaagtaacttgctctgttg 23933485  T
Q  112 caaacagataaaatttgcaatctttaaccc 141  Q
    ||||||||||||| ||||||| | ||||||    
T  23933486 caaacagataaaaattgcaatgtataaccc 23933515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 17 - 245
Target Start/End: Original strand, 17743321 - 17743550
Alignment:
Q  17 tgttatttaat-tccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaag-cagataa-cttgctctgttgca 113  Q
    ||||||||||| |||||| | |||||  | ||||||||||| | ||||||||   |||| ||||||| ||||||||  ||| ||| ||||||  ||||||    
T  17743321 tgttatttaatatccaacaatataaacggaggagattcaaataatcctaaccgcggcttccttttctacaaccaaaaacaggtaaacttgcttagttgca 17743420  T
Q  114 aacagataaaatttgcaa-tctttaacccttaactcttttattttatatcgtcaa-ctt---aaaataagtaacgcgaattgtttggaccaaacaacaat 208  Q
    || |||||||| |||||| ||| ||||||||||||       |||||||||| || |||   |||||||||||| |||||||||||||| |||| | |||    
T  17743421 aaaagataaaaattgcaactctctaacccttaact-------tttatatcgttaaacttgcaaaaataagtaacacgaattgtttggacgaaacgataat 17743513  T
Q  209 ccatgtggatacgatactctacttatcactttattac 245  Q
    |||||||||||||||||||||||||||||||||||||    
T  17743514 ccatgtggatacgatactctacttatcactttattac 17743550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 55 - 245
Target Start/End: Complemental strand, 25196226 - 25196035
Alignment:
Q  55 aagagtcctaaccattgcttacttttctgcaaccaaagcagataa-cttgctctgttgcaaacagataaaatttgcaa---tctttaacccttaactctt 150  Q
    |||| ||||||||| ||||||||||| |||||||||| ||| ||| |||||| ||||||||||| |||||| || |||   | ||||||| ||||||       
T  25196226 aagaatcctaaccactgcttacttttttgcaaccaaaacaggtaaacttgctatgttgcaaacatataaaaatttcaagtctttttaaccattaact--- 25196130  T
Q  151 ttattttatatcgtcaacttaa----aataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
        | ||||||||||||||||    ||||||||||| ||||||||||||| |||  |||| || |||||||| |||||||||||||||||||||||||    
T  25196129 ----tatatatcgtcaacttaataaaaataagtaacgtgaattgtttggacgaaaggacaacccctgtggatatgatactctacttatcactttattac 25196035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 163 - 245
Target Start/End: Original strand, 25888216 - 25888294
Alignment:
Q  163 gtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    ||||||||||||||||||||||||||||||||    |||| ||||||||||||||||||||||| ||||||||||||||||||    
T  25888216 gtcaacttaaaataagtaacgcgaattgtttg----aaacgacaatccatgtggatacgatactgtacttatcactttattac 25888294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 49 - 245
Target Start/End: Complemental strand, 28925743 - 28925546
Alignment:
Q  49 gattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagat-aacttgctctgttgcaaacagataaaatttgcaatctttaacccttaact 147  Q
    ||||| |||| ||||||||  |||||||||||||||||||||| ||| | |||||||| ||||||||||| |||||| |||||| ||||      ||||     
T  28925743 gattcgaagaatcctaacctctgcttacttttctgcaaccaaaacaggtaaacttgctatgttgcaaacaaataaaaattgcaagcttt-----ctaacc 28925649  T
Q  148 cttt-tattttatatcgtc-aactt---aaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttat 242  Q
    |||| | |||||||||||| |||||   ||||||| ||||  ||||||||||||| |||| |||||||| |||||||| |  ||||||||||||||||||    
T  28925648 ctttatcttttatatcgtcaaacttacaaaaataaataacatgaattgtttggacgaaacgacaatccacgtggatacaacgctctacttatcactttat 28925549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 171 - 245
Target Start/End: Original strand, 12953294 - 12953368
Alignment:
Q  171 aaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    ||||||||||||||||||||||| ||| |||| |||||||||||||| || ||||||||||||| ||||||||||    
T  12953294 aaaataagtaacgcgaattgttttgacgaaacgacaatccatgtggacacaatactctacttattactttattac 12953368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 24 - 245
Target Start/End: Complemental strand, 45553372 - 45553155
Alignment:
Q  24 taattccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgctctgttgcaaacagataaa 123  Q
    |||||||||| |||| |||||||| |||||||||| ||||||||  |||| || || ||||||||||| ||| ||||||||| |||||||||||||||||    
T  45553372 taattccaac-aaatgaatagggg-gattcaaagaatcctaaccgctgctaacgtt-ctgcaaccaaaacaggtaacttgctatgttgcaaacagataaa 45553276  T
Q  124 atttgc-aatct-ttaacccttaactcttttattttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacg 221  Q
    | |||| ||||| | |||| | | ||||||||| |||| | ||     | |||||| |||| ||||||| |||||| |||| ||||||| |||  |||||    
T  45553275 aattgcaaatctctaaaccgtcagctcttttatattattttgt---tctcaaataattaacacgaattgcttggacaaaacgacaatccctgtaaatacg 45553179  T
Q  222 atactctacttatcactttattac 245  Q
    ||| | ||||||||||||||||||    
T  45553178 atattttacttatcactttattac 45553155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 70 - 244
Target Start/End: Original strand, 31804797 - 31804973
Alignment:
Q  70 tgcttacttttctgcaaccaaag-cagataactt-gctctgttgcaaacagataaaatttgcaa-tctttaacccttaactcttttattttatatcgtca 166  Q
    ||||||||||||||||||||||  ||| ||| || ||| | ||||||||| |||||| |||||| ||| |||||||||  |||||||||  |||||||||    
T  31804797 tgcttacttttctgcaaccaaaaacaggtaaatttgctttattgcaaacaaataaaaattgcaactctctaaccctta--tcttttatt--atatcgtca 31804892  T
Q  167 actta---aaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttatta 244  Q
    |||||   ||||||||||| |  |||| |||||| ||||  |||||  ||||||||| |||||||||||||||||||||||    
T  31804893 acttacaaaaataagtaacacagattggttggacgaaacggcaatctctgtggatacaatactctacttatcactttatta 31804973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 161 - 243
Target Start/End: Original strand, 9774325 - 9774405
Alignment:
Q  161 tcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttatt 243  Q
    |||| |||| |||||||||||||| ||||| |||||| |||| |||||||||||||||||||||||||||  |||||||||||    
T  9774325 tcgttaactaaaaataagtaacgcaaattggttggacaaaacgacaatccatgtggatacgatactctac--atcactttatt 9774405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 171 - 245
Target Start/End: Original strand, 24090926 - 24091000
Alignment:
Q  171 aaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    ||||||||||||  ||||||||||||| |||  ||||||||||||||||||||| |||| |||||||||||||||    
T  24090926 aaaataagtaacaagaattgtttggacgaaaggacaatccatgtggatacgatattctatttatcactttattac 24091000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 171 - 245
Target Start/End: Complemental strand, 25535373 - 25535299
Alignment:
Q  171 aaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    ||||||||||||  |||||||| |||| |||  ||||||| ||||||||||||||||||||||||||||||||||    
T  25535373 aaaataagtaacaagaattgttcggacgaaaggacaatccctgtggatacgatactctacttatcactttattac 25535299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 171 - 245
Target Start/End: Complemental strand, 30411777 - 30411703
Alignment:
Q  171 aaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    |||||||||||||| ||||||| |||| |||  ||||||| ||| ||||||||||||||||||||||||||||||    
T  30411777 aaaataagtaacgcaaattgttgggacgaaatgacaatccctgttgatacgatactctacttatcactttattac 30411703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 17 - 131
Target Start/End: Original strand, 26603205 - 26603320
Alignment:
Q  17 tgttatttaat-tccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaag-cagataacttgctctgttgcaa 114  Q
    ||||||||||| |||||| | ||||||||||| ||||| |||| ||||||||  ||||||||||||| ||||||||  ||| |||  |||||||||||||    
T  26603205 tgttatttaatatccaacaatataaatagggg-gattcgaagaatcctaaccgctgcttacttttctacaaccaaaaacaggtaaactgctctgttgcaa 26603303  T
Q  115 acagataaaatttgcaa 131  Q
    |||||||||| ||||||    
T  26603304 acagataaaaattgcaa 26603320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 19 - 158
Target Start/End: Original strand, 25887750 - 25887893
Alignment:
Q  19 ttatttaat-tccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagc-agataacttgctctgttgcaaac 116  Q
    ||||||||| |||||| | ||||||||||| ||||  |||| || ||| |  || |||||||||||||||||||   || ||||||||||||||||||||    
T  25887750 ttatttaatatccaacaatataaataggggggatttgaagaatcataatcgctggttacttttctgcaaccaaaaataggtaacttgctctgttgcaaac 25887849  T
Q  117 agataaaatttgc-aatctttaaccc-ttaactcttttatttta 158  Q
    |||||||| |||| ||||| |||||| |||||||||||| ||||    
T  25887850 agataaaaattgcaaatctctaaccctttaactcttttacttta 25887893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 80 - 245
Target Start/End: Original strand, 17635683 - 17635849
Alignment:
Q  80 tctgcaaccaaagcagataa-cttgctctgttgcaaacagataaaatttgcaatctt--taacccttaactcttttattttatatcgtcaactt---aaa 173  Q
    |||||||||||| ||| ||| ||||||||||||||||||||||||| |||||| |||  ||||||||     || | ||||| |||||||||||   |||    
T  17635683 tctgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaacctttctaaccctt-----ttatcttttacatcgtcaacttacaaaa 17635777  T
Q  174 ataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    |||||||||| || || ||| ||| |||| ||||||  |||||||| ||| |||||||| || |||||||||    
T  17635778 ataagtaacgtgagtttttttgacgaaacgacaatctctgtggatatgattctctacttttctctttattac 17635849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 171 - 233
Target Start/End: Complemental strand, 25920365 - 25920303
Alignment:
Q  171 aaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctactta 233  Q
    ||||||||||||| |||||||| |||| |||  ||||||||||||||||||||||||||||||    
T  25920365 aaaataagtaacgagaattgttcggacgaaaggacaatccatgtggatacgatactctactta 25920303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 171 - 245
Target Start/End: Complemental strand, 27418465 - 27418391
Alignment:
Q  171 aaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    |||||||||||| ||||||||||||   |||  | |||||||||||||| |||||||||||||||||||||||||    
T  27418465 aaaataagtaacacgaattgtttggttgaaatgataatccatgtggatatgatactctacttatcactttattac 27418391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 175 - 244
Target Start/End: Original strand, 30900848 - 30900917
Alignment:
Q  175 taagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttatta 244  Q
    ||||||||||||||||||| ||| ||||||||||  | |||||||| |||||||| ||||||||||||||    
T  30900848 taagtaacgcgaattgtttagacgaaacaacaatatacgtggatacaatactctagttatcactttatta 30900917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 244
Target Start/End: Original strand, 19200130 - 19200207
Alignment:
Q  166 aacttaaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttatta 244  Q
    |||||||||||||||| | || |||||||||  |||| ||||||| |||||||||||||||| ||||||||| ||||||    
T  19200130 aacttaaaataagtaatgtgagttgtttggatgaaacgacaatccttgtggatacgatactc-acttatcacattatta 19200207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 171 - 245
Target Start/End: Complemental strand, 25530546 - 25530472
Alignment:
Q  171 aaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    ||||||||||| | ||||| |  |||| |||  ||||||| ||||||||||||||||||||||||||||||||||    
T  25530546 aaaataagtaatgagaattttacggacgaaaggacaatccctgtggatacgatactctacttatcactttattac 25530472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 171 - 245
Target Start/End: Complemental strand, 29143060 - 29142986
Alignment:
Q  171 aaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    |||||||||||||||||||||| | || ||   |||||||||||||||||| |||||||||||||  ||||||||    
T  29143060 aaaataagtaacgcgaattgttcgaacgaacggacaatccatgtggatacggtactctacttatcgttttattac 29142986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 77 - 136
Target Start/End: Original strand, 17675534 - 17675594
Alignment:
Q  77 ttttctgcaaccaaagcagataa-cttgctctgttgcaaacagataaaatttgcaatcttt 136  Q
    ||||||||||||||| ||| ||| ||||||||||||||||||||||||| |||||| ||||    
T  17675534 ttttctgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaaccttt 17675594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 131
Target Start/End: Complemental strand, 25530657 - 25530574
Alignment:
Q  49 gattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataactt-gctctgttgcaaacagataaaatttgcaa 131  Q
    ||||| |||| ||||||||  |||||||| || |||||||||| ||| ||| || |||||||||||||||||||||| ||||||    
T  25530657 gattcgaagaatcctaaccgctgcttactattttgcaaccaaaacaggtaaattcgctctgttgcaaacagataaaaattgcaa 25530574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 171 - 245
Target Start/End: Original strand, 26603350 - 26603424
Alignment:
Q  171 aaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    |||||||||||||  ||||||||| || |||  ||||||||| |  |||||||||||||||||||||||| ||||    
T  26603350 aaaataagtaacgtcaattgtttgcacgaaaagacaatccatataaatacgatactctacttatcacttttttac 26603424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 233
Target Start/End: Complemental strand, 5777314 - 5777253
Alignment:
Q  172 aaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctactta 233  Q
    |||||||||||| ||||||||||||| |||| ||||||||| | ||| ||||||| ||||||    
T  5777314 aaataagtaacgtgaattgtttggacgaaacgacaatccatatagattcgatactttactta 5777253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 245
Target Start/End: Original strand, 8503071 - 8503144
Alignment:
Q  172 aaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    |||| |||||||| ||||||||||   |||  |||||||||||||||| ||| ||||||||||||| |||||||    
T  8503071 aaattagtaacgcaaattgtttggttgaaatgacaatccatgtggatatgatcctctacttatcacgttattac 8503144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 60 - 131
Target Start/End: Complemental strand, 30411878 - 30411805
Alignment:
Q  60 tcctaaccattgcttacttttctgcaaccaaag-cagataa-cttgctctgttgcaaacagataaaatttgcaa 131  Q
    ||||||||  ||||||||||||||||||||||  ||  ||| ||||||||||||||||||||||||| ||||||    
T  30411878 tcctaaccgctgcttacttttctgcaaccaaaaacatgtaaacttgctctgttgcaaacagataaaaattgcaa 30411805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 244
Target Start/End: Original strand, 28770444 - 28770516
Alignment:
Q  172 aaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttatta 244  Q
    ||||||||| || ||||||||||||  |||  ||| | | | |||||||||||||||||||||||||||||||    
T  28770444 aaataagtagcgtgaattgtttggatgaaaagacattacctatggatacgatactctacttatcactttatta 28770516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 245
Target Start/End: Complemental strand, 26667417 - 26667342
Alignment:
Q  171 aaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctactta-tcactttattac 245  Q
    ||||||||||||| |||||||| | || |||  | ||||| |||||||||||||||||||||| | ||||||||||    
T  26667417 aaaataagtaacgagaattgttcgtacgaaaggaaaatccctgtggatacgatactctacttactaactttattac 26667342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 73 - 131
Target Start/End: Complemental strand, 29143147 - 29143088
Alignment:
Q  73 ttacttttctgcaaccaaagcagataa-cttgctctgttgcaaacagataaaatttgcaa 131  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||||||| ||||||    
T  29143147 ttacttttctacaaccaaaataggtaaacttgctctgttgcaaacagataaaaattgcaa 29143088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 230
Target Start/End: Original strand, 21078627 - 21078685
Alignment:
Q  172 aaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctac 230  Q
    ||||||| ||||  |||||||||||| |||| ||||||| ||||||| |||||||||||    
T  21078627 aaataagcaacgtaaattgtttggacgaaacgacaatccttgtggatgcgatactctac 21078685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 245
Target Start/End: Original strand, 8447083 - 8447123
Alignment:
Q  204 acaatccatgtggatacgatactctacttatcactttattac 245  Q
    ||||||||||||||||||||| ||||||||| ||||||||||    
T  8447083 acaatccatgtggatacgataatctacttat-actttattac 8447123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 145; Significance: 2e-76; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 10 - 245
Target Start/End: Complemental strand, 39845 - 39609
Alignment:
Q  10 agatgaatgttatttaattccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgctctgt 109  Q
    |||||||||| |||||| |||||| ||||||||||||| ||||||||||||| |||||  |||||||||||||||||||||| ||| |||||||||||||    
T  39845 agatgaatgtaatttaactccaacaaaataaataggggggattcaaagagtcataaccgctgcttacttttctgcaaccaaaacaggtaacttgctctgt 39746  T
Q  110 tgcaaacagataaaatttgcaatctttaacccttaactcttttattttatatcgtcaacttaaaataagtaacgcga-attgtttggaccaaacaacaat 208  Q
    ||||||||||||||| ||||||||| |||  |||| |||||||||||||||||||||||||||||||||||| | ||  || ||||||| ||||||||||    
T  39745 tgcaaacagataaaaattgcaatctctaattcttatctcttttattttatatcgtcaacttaaaataagtaaagtgagtttttttggacaaaacaacaat 39646  T
Q  209 ccatgtggatacgatactctacttatcactttattac 245  Q
    | ||||||||||||| |||||||||||||||||||||    
T  39645 caatgtggatacgatgctctacttatcactttattac 39609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 135; Significance: 2e-70; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 12 - 245
Target Start/End: Complemental strand, 985 - 753
Alignment:
Q  12 atgaatgttatttaattccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgctctgttg 111  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||  |||||| |||||| |||||||| ||| || ||| ||||||||    
T  985 atgaatgttatttaattccaacaaaataaatagggg-gattcaaagagtcctaaccgctgcttagttttctacaaccaaa-caggtatcttactctgttg 888  T
Q  112 caaacagataaaatttgcaatctttaacccttaactcttttattttatatcgtcaacttaaaataagtaacg-cgaattgtttggaccaaacaacaatcc 210  Q
    ||||||| ||||| ||| ||||| ||||||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||| |||| |||||||    
T  887 caaacaggtaaaaattgaaatctctaacccttaactcttttattttatatcttcaacttaaaataagtaacgtcggattgtttggacgaaacgacaatcc 788  T
Q  211 atgtggatacgatactctacttatcactttattac 245  Q
     ||| ||||| ||||||||||||||||||||||||    
T  787 ttgttgatacaatactctacttatcactttattac 753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 135; Significance: 2e-70; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 12 - 245
Target Start/End: Complemental strand, 5679463 - 5679230
Alignment:
Q  12 atgaatgttatttaattccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttct-gcaaccaaagcagataacttgctctgtt 110  Q
    |||||||||||||||||||||| ||||||||||||  |||||||||||||||||    ||||||||||| | |||||||||  || ||||||||||||||    
T  5679463 atgaatgttatttaattccaacaaaataaatagggaggattcaaagagtcctaatggctgcttactttttttgcaaccaaat-aggtaacttgctctgtt 5679365  T
Q  111 gcaaacagataaaatttgcaatctttaacccttaactcttttattttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaatcc 210  Q
     ||||||||||||| ||||||| | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| | | |    
T  5679364 acaaacagataaaaattgcaatgtctaacccttaactcttttattttatatcgttaacttaaaataagtaacgcgaattgtttggacgaaacaaaagttc 5679265  T
Q  211 atgtggatacgatactctacttatcactttattac 245  Q
    |||| |||||||||||||||| |||||||||||||    
T  5679264 atgtagatacgatactctactaatcactttattac 5679230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 72 - 245
Target Start/End: Complemental strand, 17672200 - 17672027
Alignment:
Q  72 cttacttttctgcaaccaaagcagataacttgctctgttgcaaacagataaaatttgcaatctttaacccttaactcttttattttatatcgtcaactta 171  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||| ||||||    
T  17672200 cttacttttctgcaaccaaaccaggtaacttgctctgttgcaaacagataaaaattgcaatctctaacctttaactcttttattttatatcgttaactta 17672101  T
Q  172 aaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    ||||||||||||||| |||||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  17672100 aaataagtaacgcgagttgtttagacgaaacaacaatccatgtggatacaatactctacttatcactttattac 17672027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 81 - 244
Target Start/End: Original strand, 12578176 - 12578339
Alignment:
Q  81 ctgcaaccaaagcagataacttgctctgttgcaaacagataaaatttgcaatctttaacccttaactcttttattttatatcgtcaacttaaaataagta 180  Q
    ||||||||||| ||| |||||||||||||||||||||||||||| ||| ||||| |||||||| |||||||||||||||||||||||||||||||||| |    
T  12578176 ctgcaaccaaaacaggtaacttgctctgttgcaaacagataaaaattgtaatctctaaccctttactcttttattttatatcgtcaacttaaaataagaa 12578275  T
Q  181 acgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttatta 244  Q
    |||| |||||||||||| |||| |||||||||||||||||||||||||| ||||||||||||||    
T  12578276 acgcaaattgtttggacaaaacgacaatccatgtggatacgatactctaattatcactttatta 12578339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 12 - 245
Target Start/End: Complemental strand, 19092553 - 19092320
Alignment:
Q  12 atgaatgttatttaattccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgctctgttg 111  Q
    ||||||||||||||| |||||  ||||||||| ||| ||| |||||||||||||||  |  ||||||||||| ||||||| ||| ||| || ||||||||    
T  19092553 atgaatgttatttaaatccaataaaataaatatgggggatgcaaagagtcctaaccgctatttacttttctgtaaccaaaacaggtaatttactctgttg 19092454  T
Q  112 caaacagataaaatttgcaatctttaacccttaactcttttattttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaatcca 211  Q
     |||||||||||| ||||||||| |||| |||| ||||||||||| ||||||||||||||||||||| |||| || |||||||||| |||| ||||||||    
T  19092453 taaacagataaaaattgcaatctctaactcttatctcttttatttaatatcgtcaacttaaaataagcaacgtgagttgtttggacgaaacgacaatcca 19092354  T
Q  212 tgtggatacgatactctacttatcactttattac 245  Q
    |||| || ||||||||| ||||||||||||||||    
T  19092353 tgtgaatgcgatactcttcttatcactttattac 19092320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 14 - 245
Target Start/End: Complemental strand, 14649151 - 14648920
Alignment:
Q  14 gaatgttatttaat-tccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaag-cagataacttgctctgttg 111  Q
    |||||||||||| | |||||| | ||||| ||||| ||||||||||||||||||| ||| || ||||||| ||||||||  ||  |||||||||||||||    
T  14649151 gaatgttatttattatccaacaatataaacagggg-gattcaaagagtcctaaccgttgtttccttttctacaaccaaaaacaagtaacttgctctgttg 14649053  T
Q  112 caaacagataaaatttgcaatctttaacccttaactcttttattttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaatcca 211  Q
    ||||||||||||| ||| ||||| |||||||||  |||||||||||||||||||||||||||||||||||| |||  | ||| ||  |||| |||||||     
T  14649052 caaacagataaaaattgaaatctctaacccttatgtcttttattttatatcgtcaacttaaaataagtaacacgagctatttagaagaaacgacaatcc- 14648954  T
Q  212 tgtggatacgatactctacttatcactttattac 245  Q
    ||||||||||||||||||||||||||||||||||    
T  14648953 tgtggatacgatactctacttatcactttattac 14648920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 12 - 245
Target Start/End: Original strand, 19929514 - 19929749
Alignment:
Q  12 atgaatgttatttaat-tccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaag-cagataacttgctctgt 109  Q
    |||||||||||||| | |||||||| ||||  |||||  ||| |||||||||||||  ||| || ||||||||||||||||  ||  ||| |||||||||    
T  19929514 atgaatgttatttattatccaacgatataagcagggggaatttaaagagtcctaactgttgtttccttttctgcaaccaaaaacatgtaatttgctctgt 19929613  T
Q  110 tgcaaacagataaaatttgcaatctttaacccttaactcttttattttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaatc 209  Q
    ||||||||||||||| ||| ||||||||||||||| |||||||||||||||| |||||||||||||||||||| ||   | ||| ||| |||| ||||||    
T  19929614 tgcaaacagataaaaattgaaatctttaacccttatctcttttattttatattgtcaacttaaaataagtaacacgggctatttagacgaaacgacaatc 19929713  T
Q  210 catgtggatacgatactctacttatcactttattac 245  Q
    |||||||||||||||||||| |||||||||| ||||    
T  19929714 catgtggatacgatactctatttatcactttgttac 19929749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 70 - 241
Target Start/End: Original strand, 17951195 - 17951366
Alignment:
Q  70 tgcttacttttctgcaaccaaagcagataacttgctctgttgcaaacagataaaatttgcaatctttaacccttaactcttttattttatatcgtcaact 169  Q
    ||||| |||||||||||||||| ||| |||||||||||||||||||||||||||| ||||||||| |||||| | |||||||||||||||||||||||||    
T  17951195 tgcttgcttttctgcaaccaaatcaggtaacttgctctgttgcaaacagataaaaattgcaatctctaacccgtcactcttttattttatatcgtcaact 17951294  T
Q  170 taaaataagtaacgcgaattgtttggaccaaacaac-aatccatgtggatacgatactctacttatcacttta 241  Q
    |||||||||||||||||  |  || ||| |||| || ||||||  ||||||||||||| ||||||||||||||    
T  17951295 taaaataagtaacgcgagctagttagacgaaacgacaaatcca-atggatacgatactttacttatcacttta 17951366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 70 - 241
Target Start/End: Original strand, 17955047 - 17955218
Alignment:
Q  70 tgcttacttttctgcaaccaaagcagataacttgctctgttgcaaacagataaaatttgcaatctttaacccttaactcttttattttatatcgtcaact 169  Q
    ||||| |||||||||||||||| ||| |||||||||||||||||||||||||||| ||||||||| |||||| | |||||||||||||||||||||||||    
T  17955047 tgcttgcttttctgcaaccaaatcaggtaacttgctctgttgcaaacagataaaaattgcaatctctaacccatcactcttttattttatatcgtcaact 17955146  T
Q  170 taaaataagtaacgcgaattgtttggaccaaacaac-aatccatgtggatacgatactctacttatcacttta 241  Q
    |||||||||||||||||  |  || ||| |||| || ||||||  ||||||||||||| ||||||||||||||    
T  17955147 taaaataagtaacgcgagctagttagacgaaacgacaaatcca-atggatacgatactttacttatcacttta 17955218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 107 - 245
Target Start/End: Complemental strand, 11490694 - 11490557
Alignment:
Q  107 tgttgcaaacagataaaatttgcaatctttaacccttaactcttttattttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaaca 206  Q
    ||||| |||||||||||| ||||||||| |||| || ||||||||||||||||||||||||  |||||||||||||||||||||||||||  |||| |||    
T  11490694 tgttgaaaacagataaaaattgcaatctctaacact-aactcttttattttatatcgtcaaactaaaataagtaacgcgaattgtttggaagaaactaca 11490596  T
Q  207 atccatgtggatacgatactctacttatcactttattac 245  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  11490595 atccctgtggatacgatactctacttatcactttattac 11490557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 28 - 245
Target Start/End: Original strand, 22357388 - 22357609
Alignment:
Q  28 tccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaag-cagataacttgctctgttgcaaacagataaaatt 126  Q
    |||||| ||||||||||||| |||||||| |||||||| |  ||||| ||||||||||| ||||  ||  ||||||||| | ||||||||| |||||| |    
T  22357388 tccaacaaaataaataggggggattcaaaaagtcctaaacgatgcttccttttctgcaatcaaaaacaagtaacttgctatattgcaaacaaataaaaat 22357487  T
Q  127 tgcaatctttaacccttaactcttttattttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacga---t 223  Q
    |||||||| |||| |||| ||||| | ||||||||||||||||| ||||||||||| |||| |||||  |  |||| |||||||||||||||||||   |    
T  22357488 tgcaatctctaactcttatctcttattttttatatcgtcaactttaaataagtaacacgaactgtttaaatgaaacgacaatccatgtggatacgatagt 22357587  T
Q  224 actctacttatcactttattac 245  Q
    ||| ||||||||||||||||||    
T  22357588 actttacttatcactttattac 22357609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 12 - 245
Target Start/End: Original strand, 25121069 - 25121299
Alignment:
Q  12 atgaatgttatttaattccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgctctgttg 111  Q
    ||||||||||||||||  |||| |||| |||||||| ||||| |||| ||||||||  ||||||||||||||||| |||| | | |||||||||||||||    
T  25121069 atgaatgttatttaatgtcaac-aaatgaatagggg-gattcgaagaatcctaaccgctgcttacttttctgcaatcaaaacgggtaacttgctctgttg 25121166  T
Q  112 caaacagataaaatttgcaatct-ttaacccttaactcttttattttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaatcc 210  Q
    |||||||||| || ||||||||| ||| | || |||||||||| ||||| |  | ||    |||||||||||||||||||||||||| |||| |||||||    
T  25121167 caaacagatagaaattgcaatctattatcactcaactctttta-tttatttttttaaaaccaaataagtaacgcgaattgtttggacgaaaccacaatcc 25121265  T
Q  211 atgtggatacgatactctacttatcactttattac 245  Q
     ||||||||||||||| |||||| |||||||||||    
T  25121266 ttgtggatacgatactatactta-cactttattac 25121299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 17 - 245
Target Start/End: Original strand, 24639306 - 24639528
Alignment:
Q  17 tgttatttaat-tccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaacc-aaagcagat-aacttgctctgttgca 113  Q
    ||||||||||| |||||| | |||||||| || |||||||||| ||||||||| ||||||||||||||||||| ||| ||| | ||||||||||||||||    
T  24639306 tgttatttaatatccaacaatataaatagagg-gattcaaagaatcctaaccactgcttacttttctgcaaccgaaaacaggtaaacttgctctgttgca 24639404  T
Q  114 aacagataaaatttgcaatctttaacccttaactcttttattttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaatccatg 213  Q
    |||| ||||||||   ||||| |||||||| ||| |||||  |||||||||||||| ||| | |      | |||||||||||| |||| | ||||||||    
T  24639405 aacaaataaaattacaaatctctaaccctttactatttta--ttatatcgtcaactaaaagtta------caaattgtttggacaaaacgaaaatccatg 24639496  T
Q  214 tggatacgatactctacttatcactttattac 245  Q
    ||||||||||||||||||||||||||||||||    
T  24639497 tggatacgatactctacttatcactttattac 24639528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 17 - 245
Target Start/End: Original strand, 17336979 - 17337209
Alignment:
Q  17 tgttatttaat-tccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaag-cagataa-cttgctctgttgca 113  Q
    ||||||||||| |||| | | ||||||| ||| ||||| |||| || ||| |  ||||||||||| ||||||||||  ||| ||| |||||||||||| |    
T  17336979 tgttatttaatatccatcaatataaataagggggattcgaagaatcataatctctgcttacttttatgcaaccaaaaacaggtaaacttgctctgttgta 17337078  T
Q  114 aacagataaaatttgcaa-tctttaacccttaactcttttattttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaatccat 212  Q
    ||||||||||| |||||| |||  ||||||| |||||||||||  |||||||||||| |||||||||||||| |||||||||||| |||  ||||||  |    
T  17337079 aacagataaaaattgcaaatctcaaaccctttactcttttatt--atatcgtcaactaaaaataagtaacgcaaattgtttggacgaaatgacaatctct 17337176  T
Q  213 gtggatacgatactctacttatcactttattac 245  Q
     |||||||||||||||||||||||| |||||||    
T  17337177 ttggatacgatactctacttatcacgttattac 17337209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 60 - 243
Target Start/End: Complemental strand, 17217030 - 17216844
Alignment:
Q  60 tcctaaccattgcttacttttctgcaaccaaagcagataa-cttgctctgttgcaaacagataaaatttgcaatctt-taacccttaactcttttatttt 157  Q
    |||||||| |||||||||||||| |||||||| ||  ||| ||||||||||||||||||||||||| ||||||  || ||||||||   |||| ||||      
T  17217030 tcctaaccgttgcttacttttctacaaccaaaacatgtaaacttgctctgttgcaaacagataaaaattgcaactttctaacccttttatcttgtatt-- 17216933  T
Q  158 atatcgtcaacttaaaa---taagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttatt 243  Q
    ||||| |||||||| ||   ||||||||| ||||||||||||| |||| |||||||||||||||| |||||||||||||||||||||||    
T  17216932 atatcatcaacttacaaatataagtaacgagaattgtttggacgaaacgacaatccatgtggatatgatactctacttatcactttatt 17216844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 79 - 244
Target Start/End: Original strand, 21323784 - 21323948
Alignment:
Q  79 ttctgcaaccaaagcagataacttgctctgttgcaaacagataaaatttgcaatct-ttaacccttaactcttttatt-ttatatcgtcaacttaaaata 176  Q
    ||||||||||||| ||| ||||||||||||||||||| |||||||| ||| ||||| ||| |||| |||||||||||| || ||| ||  |   ||||||    
T  21323784 ttctgcaaccaaaacaggtaacttgctctgttgcaaatagataaaaattgtaatctcttatccctcaactcttttattattttattgttca---aaaata 21323880  T
Q  177 agtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttatta 244  Q
    ||||||||||||||||||||| |||| |||||| ||||||||||||||||||||| ||||| ||||||    
T  21323881 agtaacgcgaattgtttggacgaaacgacaatctatgtggatacgatactctactgatcacattatta 21323948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 16 - 245
Target Start/End: Complemental strand, 13909110 - 13908879
Alignment:
Q  16 atgttatttaat-tccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaag-cagataa-cttgctctgttgc 112  Q
    |||||||||||| |||||| | ||||| | ||| |||||||||| ||||||||  ||||||||||| ||||||||||  ||| ||| |||||||||||||    
T  13909110 atgttatttaatatccaacaatataaacaagggggattcaaagaatcctaaccgctgcttacttttttgcaaccaaaaacaggtaaacttgctctgttgc 13909011  T
Q  113 aaacagataaaatttgcaat-ctttaacccttaactcttttattttatatcgtcaactt----aaaataagtaacgcgaattgtttggaccaaacaacaa 207  Q
    |||||||||||| ||||||  ||||      |||| ||||  ||||||||||||||  |    |||||||||||| |||||||||||||| |||| ||||    
T  13909010 aaacagataaaaattgcaagactttc-----taac-ctttacttttatatcgtcaaaattacaaaaataagtaacacgaattgtttggacgaaacgacaa 13908917  T
Q  208 tccatgtggatacgatactctacttatcactttattac 245  Q
    ||| ||||||||||||||||||||||||||||||||||    
T  13908916 tccttgtggatacgatactctacttatcactttattac 13908879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 7 - 159
Target Start/End: Original strand, 19374649 - 19374800
Alignment:
Q  7 gtgagatgaatgttatttaattccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgctc 106  Q
    |||| |||||||||||||||||||||| |||| |||| ||| ||| |||||| ||||||||| ||||||| |||||||||||||| ||| |||||||||     
T  19374649 gtgacatgaatgttatttaattccaac-aaatgaataagggcgatacaaagaatcctaaccaatgcttacatttctgcaaccaaaacaggtaacttgctt 19374747  T
Q  107 tgttgcaaacagataaaatttgcaatctttaacccttaactcttttattttat 159  Q
    || |||||||| |||||||||||||||| || || | |||||||| |||||||    
T  19374748 tgctgcaaacatataaaatttgcaatctctatccttcaactctttcattttat 19374800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 112 - 245
Target Start/End: Original strand, 22175904 - 22176036
Alignment:
Q  112 caaacagataaaatttgcaatctttaacccttaactcttttattttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaatcca 211  Q
    |||||| |||||| ||||||||| ||||||||||||||||||||||||||| |||||| ||||||| | ||||||||||||||||  |||  ||||||      
T  22175904 caaacaaataaaaattgcaatctctaacccttaactcttttattttatatcatcaactcaaaataa-ttacgcgaattgtttggagaaaatgacaatctc 22176002  T
Q  212 tgtggatacgatactctacttatcactttattac 245  Q
    | ||||||| ||||||||||||||||||||||||    
T  22176003 tatggatacaatactctacttatcactttattac 22176036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 17 - 245
Target Start/End: Complemental strand, 7582552 - 7582322
Alignment:
Q  17 tgttatttaat-tccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaag-cagataa-cttgctctgttgca 113  Q
    ||||||||||| |||||| | ||||| || || |||||||||| ||||||||| |||||| |||||||||||||||  ||| ||| |||| ||| |||||    
T  7582552 tgttatttaatatccaacaatataaacagaggggattcaaagaatcctaaccactgcttatttttctgcaaccaaaaacaggtaaacttgttctattgca 7582453  T
Q  114 aacagataaaatttgcaatctttaacccttaactcttttattttatatcgtcaa-ctta---aaataagtaacgcgaattgtttggaccaaacaacaatc 209  Q
    ||||||| ||| ||||||    ||| ||||     || | |||||||||||||| ||||   |||||||||| ||  ||||||||||| |||||||||||    
T  7582452 aacagatgaaaattgcaaatcctaagcctt-----ttatcttttatatcgtcaaacttaccaaaataagtaatgcagattgtttggacgaaacaacaatc 7582358  T
Q  210 catgtggatacgatactctacttatcactttattac 245  Q
    |||||||||| |||||||||||||||||||||||||    
T  7582357 catgtggatatgatactctacttatcactttattac 7582322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 245
Target Start/End: Original strand, 8969575 - 8969795
Alignment:
Q  16 atgttatttaattccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgctctgttgcaaa 115  Q
    |||||||||| ||| ||| ||||||||||||| ||||| |||||||||||||||||||||||  | ||||| ||||  |  ||||||||||||||||| |    
T  8969575 atgttatttagttcaaacaaaataaatagggg-gattcgaagagtcctaaccattgcttactaatttgcaa-caaaaaatgtaacttgctctgttgcata 8969672  T
Q  116 cagataaaatttgcaatctttaacccttaactcttttattttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaatccatgtg 215  Q
     ||||| || ||||||||| ||||||||||    ||||  ||||||||||||   |||||||||||| |||||||||||||| |||| ||||||   ||     
T  8969673 tagatataaattgcaatctctaacccttaa----ttta--ttatatcgtcaaaacaaaataagtaacacgaattgtttggacgaaacgacaatctcagta 8969766  T
Q  216 gatacgatactctacttatcactttattac 245  Q
    |||||| | ||||||||| |||||||||||    
T  8969767 gatacgttgctctactta-cactttattac 8969795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 72 - 234
Target Start/End: Complemental strand, 15164964 - 15164803
Alignment:
Q  72 cttacttttctgcaaccaaagcagataa-cttgctctgttgcaaacagataaaatttgcaa-tctttaacccttaactcttttattttatatcgtc-aac 168  Q
    |||||||||||||||||||| ||| ||| |||||||||||||||||| |||||| |||||| ||| |||||||||||       |||||||||||| |||    
T  15164964 cttacttttctgcaaccaaaacaggtaaacttgctctgttgcaaacaaataaaaattgcaactctctaacccttaac-------ttttatatcgtcaaac 15164872  T
Q  169 tt---aaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttat 234  Q
    ||   |||||||||||||| |||||||||||| |||  ||||||| ||||||||||||||||| |||||    
T  15164871 ttacaaaaataagtaacgcaaattgtttggacgaaatgacaatccctgtggatacgatactctgcttat 15164803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 70 - 245
Target Start/End: Original strand, 19636486 - 19636660
Alignment:
Q  70 tgcttacttttctgcaaccaaagcagataacttgctctgttgcaaacagataaaatttgc-aatctttaacccttaactcttttattttatatcgtcaa- 167  Q
    ||||||||||||| |||| |||  || |||||||||||| | |||||| |||||| | |  ||||| ||||||||||||||||||||||||  ||||||     
T  19636486 tgcttacttttctacaacaaaaatag-taacttgctctgctacaaacatataaaaatagtgaatctctaacccttaactcttttattttat--cgtcaaa 19636582  T
Q  168 cttaaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    |||||||||||||||  ||||||||||||  |||| ||||||| | | ||||| |||||||||||| |||||||||||    
T  19636583 cttaaaataagtaacatgaattgtttggatgaaacgacaatccctatagatacaatactctacttaccactttattac 19636660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 172 - 245
Target Start/End: Complemental strand, 19882738 - 19882665
Alignment:
Q  172 aaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    |||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||| |||||||||||||    
T  19882738 aaataagtaacgcgaattgtttggacgaaacgacaatccatgttgatacgatactctactaatcactttattac 19882665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 171 - 245
Target Start/End: Original strand, 13692669 - 13692743
Alignment:
Q  171 aaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    |||||||||||| |||||||||||| | |||| |||||||||||||||| |||||||||||||||||||||||||    
T  13692669 aaaataagtaacacgaattgtttggtcgaaacgacaatccatgtggatatgatactctacttatcactttattac 13692743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 98 - 245
Target Start/End: Original strand, 13128802 - 13128948
Alignment:
Q  98 aacttgctctgttgcaaacagataaaatttgcaa-tctttaacccttaactcttttattttatatcgtcaacttaaaa--taagtaacgcgaattgtttg 194  Q
    ||||| ||||||| |||||| |||||| |||||| ||| |||||||||  |||||||||  |||| ||||||| ||||  |||||||||||| |||||||    
T  13128802 aacttactctgttccaaacaaataaaaattgcaactctctaaccctta--tcttttatt--atatggtcaactaaaaaaataagtaacgcgagttgtttg 13128897  T
Q  195 gaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    ||| |||| ||||||| | ||||||| ||||||||||||||| ||||||||    
T  13128898 gacgaaacgacaatccctatggatacaatactctacttatcattttattac 13128948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 174 - 245
Target Start/End: Original strand, 13992879 - 13992950
Alignment:
Q  174 ataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    ||||||||| |||||||||||||| |||| | |||||||||||||||||||||||||||| |||||||||||    
T  13992879 ataagtaacacgaattgtttggacaaaacgaaaatccatgtggatacgatactctacttaccactttattac 13992950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 98 - 240
Target Start/End: Original strand, 16730328 - 16730468
Alignment:
Q  98 aacttgctctgttgcaaacagataaaatttgcaatctt-taacccttaactcttttattttatatcgtcaa-ctta---aaataagtaacgcgaattgtt 192  Q
    ||||||||||||||||||||||||||| ||||||  || ||||||||||||       ||||||| ||||| ||||   ||||||||||||||| |||||    
T  16730328 aacttgctctgttgcaaacagataaaaattgcaactttctaacccttaact-------tttatattgtcaaacttacaaaaataagtaacgcgagttgtt 16730420  T
Q  193 tggaccaaacaacaatccatgtggatacgatactctacttatcacttt 240  Q
    ||||| |||| | ||||| | |||||||||||||||||||||||||||    
T  16730421 tggacgaaacgaaaatccttttggatacgatactctacttatcacttt 16730468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 19 - 226
Target Start/End: Original strand, 26115755 - 26115959
Alignment:
Q  19 ttatttaattccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgctctgttgcaaacag 118  Q
    ||||||||||| ||| |||| |||||||| ||||  |||| ||||||||  |||| || ||| |||||||||| ||| |||||| |||||||||||||||    
T  26115755 ttatttaattcgaac-aaatgaatagggg-gatttgaagaatcctaaccgctgctaacatttatgcaaccaaaacaggtaacttactctgttgcaaacag 26115852  T
Q  119 ataaaatttgc-aatct-ttaacccttaactcttttattttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaatccatgtgg 216  Q
    |||||| |||| ||||| |||||||| ||||||||||| ||||    | |  |||||||||||||  |||||||||||||  || | ||||||| | |||    
T  26115853 ataaaaattgcaaatctcttaaccctaaactcttttatattat---tttattttaaaataagtaaaacgaattgtttggaagaatcgacaatccttatgg 26115949  T
Q  217 atacgatact 226  Q
    ||||||||||    
T  26115950 atacgatact 26115959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 72 - 245
Target Start/End: Complemental strand, 17709952 - 17709782
Alignment:
Q  72 cttacttttctgcaaccaaagcagataa-cttgctctgttgcaaacagataaaatttgcaa-tctttaacccttaactcttttattttatatcgtcaact 169  Q
    ||||||||| |||||||||| ||| ||| |||||||||||||||||| |||||| || ||| |||||     ||||| ||| | |||||||||||||| |    
T  17709952 cttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacatataaaaatttcaagtcttt-----ttaacccttatcttttatatcgtcaaat 17709858  T
Q  170 ta---aaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    ||   |||||||||||| |||||||   ||| ||| |||||||| | ||||||| ||||||||||||||||||||||||    
T  17709857 tataaaaataagtaacgagaattgt---gacaaaagaacaatccctatggatacaatactctacttatcactttattac 17709782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 171 - 245
Target Start/End: Original strand, 19492700 - 19492774
Alignment:
Q  171 aaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    ||||||||||||||||||||||||||  |||| ||||| | |||||||||||||||||||||||| |||||||||    
T  19492700 aaaataagtaacgcgaattgtttggatgaaacgacaattcttgtggatacgatactctacttatccctttattac 19492774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 73 - 245
Target Start/End: Original strand, 20829640 - 20829812
Alignment:
Q  73 ttacttttctgcaaccaaag-cagataacttgctctgttgcaaacagataaaatttgcaa-tct-ttaacccttaactcttttattttatatcgtc-aac 168  Q
    |||| ||||||||||||||  ||  ||||||||| ||| |||||||||||||| ||| || ||| |||||||||| || |||||||||||  |||| |||    
T  20829640 ttacatttctgcaaccaaaaacaagtaacttgctatgtcgcaaacagataaaaattgtaaatctcttaacccttatct-ttttattttat--cgtcgaac 20829736  T
Q  169 ttaaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    ||||||||||||| || |||| |||| || |||||||||||| ||||||||| |||||| | |||||||||||||||    
T  20829737 ttaaaataagtaatgcaaattttttgaacgaaacaacaatccttgtggatacaatactc-agttatcactttattac 20829812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 159 - 245
Target Start/End: Complemental strand, 11933529 - 11933444
Alignment:
Q  159 tatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    |||| |||| |||||||||||||||||| |||||||||| |||| |||||||||||||  ||||||||| ||||||||||| |||||    
T  11933529 tatcatcaaattaaaataagtaacgcgagttgtttggacgaaacgacaatccatgtggtcacgatactc-acttatcacttcattac 11933444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 172 - 245
Target Start/End: Complemental strand, 20315098 - 20315025
Alignment:
Q  172 aaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    ||||||||||||| |||||||||||| |||| ||||||| |||||||| |||| ||||||||||| ||||||||    
T  20315098 aaataagtaacgcaaattgtttggacgaaacgacaatccttgtggatatgatattctacttatcaatttattac 20315025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 78 - 245
Target Start/End: Complemental strand, 3775021 - 3774850
Alignment:
Q  78 tttctgcaaccaaagcagataacttgctctgttgcaaacagataaaatttgcaatcttt-aacccttaactcttttatttta---tatcgtcaacttaaa 173  Q
    ||||||||||||||  || ||||||||||||||||||| ||||||||||   ||||||| |||||| |||| ||||||||||   ||| || ||   | |    
T  3775021 tttctgcaaccaaaaaaggtaacttgctctgttgcaaatagataaaattgcaaatctttaaaccctcaact-ttttattttattttattgttaaaaaata 3774923  T
Q  174 ataagtaacgcgaattgtttggaccaaac--aacaatccatgtggatacgatactctacttatcactttattac 245  Q
    |||||||||| ||||||||||||  ||||   ||||| |||||||||| ||||||||||||  |||||||||||    
T  3774922 ataagtaacgtgaattgtttggatgaaacgacacaattcatgtggatatgatactctactt-gcactttattac 3774850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 172 - 244
Target Start/End: Original strand, 11521192 - 11521264
Alignment:
Q  172 aaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttatta 244  Q
    |||||||||| | |||| |||| ||  |||| |||||||||||| ||||||||||||||||||||||||||||    
T  11521192 aaataagtaatgtgaatagtttagaagaaacgacaatccatgtgtatacgatactctacttatcactttatta 11521264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 175 - 245
Target Start/End: Complemental strand, 25094663 - 25094592
Alignment:
Q  175 taagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctactta-tcactttattac 245  Q
    ||||||||  ||||||||||||| ||| ||||||||||||||||| ||||||||||||| | ||||||||||    
T  25094663 taagtaacaagaattgtttggacgaaagaacaatccatgtggatatgatactctacttactaactttattac 25094592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 171 - 245
Target Start/End: Complemental strand, 25097934 - 25097859
Alignment:
Q  171 aaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctactta-tcactttattac 245  Q
    ||||||||||||  ||||| || |||| ||| ||||||||||||||||||||||||||||||| | ||||||||||    
T  25097934 aaaataagtaacatgaatttttcggacaaaagaacaatccatgtggatacgatactctacttactaactttattac 25097859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 98 - 245
Target Start/End: Complemental strand, 40227947 - 40227801
Alignment:
Q  98 aacttgctctgttgcaaacagataaaatttgcaatctt-taacccttaactcttttattttatatcgtcaa-cttaaaataagtaacgcgaattgtttgg 195  Q
    ||||| ||| ||||||||||||||||| ||| || | | || ||||| |||||||||| ||||  |||||| || |||||||||||||||||||||||||    
T  40227947 aacttactccgttgcaaacagataaaaattgtaaacctctagccctttactcttttatattat--cgtcaaactaaaaataagtaacgcgaattgtttgg 40227850  T
Q  196 accaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    |  |||| ||||| | | ||||||| ||| |  |||||||||||||||||    
T  40227849 atgaaactacaattcctatggatacaata-ttaacttatcactttattac 40227801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 232
Target Start/End: Original strand, 9737512 - 9737565
Alignment:
Q  179 taacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctactt 232  Q
    |||||| |||||||| ||| |||| |||||||||||||||||||||||||||||    
T  9737512 taacgcaaattgtttagacgaaactacaatccatgtggatacgatactctactt 9737565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 11935310 - 11935237
Alignment:
Q  19 ttatttaat-tccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaa 91  Q
    ||||||||| |||||||| |||||||| || ||||| |||| ||||||||| || |||||||||||||||||||    
T  11935310 ttatttaatctccaacgatataaatagaggggattcgaagaatcctaaccactgattacttttctgcaaccaaa 11935237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 116
Target Start/End: Original strand, 22173395 - 22173499
Alignment:
Q  12 atgaatgttatttaat-tccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgctctgtt 110  Q
    |||| ||||||||||| |||||| ||||||||||||| |||| |||||||| ||||   |||||||||||||||||||||| ||  ||| ||| ||| ||    
T  22173395 atgactgttatttaatatccaacaaaataaatagggg-gatttaaagagtcataactgctgcttacttttctgcaaccaaaacatgtaaattgttctctt 22173493  T
Q  111 gcaaac 116  Q
    ||||||    
T  22173494 gcaaac 22173499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 199 - 244
Target Start/End: Complemental strand, 22526435 - 22526390
Alignment:
Q  199 aaacaacaatccatgtggatacgatactctacttatcactttatta 244  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||    
T  22526435 aaacgacaattcatgtggatacgatactctacttatcactttatta 22526390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 73 - 245
Target Start/End: Original strand, 19562076 - 19562252
Alignment:
Q  73 ttacttttctgcaaccaaag-cagataa-cttgctctgttgcaaacagataaaatttgcaatctt-taacccttaactcttttattttatatcgtcaa-c 168  Q
    |||||||||||||||||||  ||| ||| |||||||||||||||| |||||||| |||||||    ||||||||   |||||||||  |||  ||||| |    
T  19562076 ttacttttctgcaaccaaaaacaggtaaacttgctctgttgcaaagagataaaaattgcaattaaataacccttttatcttttatt--ataatgtcaaac 19562173  T
Q  169 ttaaaa--taagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    ||||||  |||||||  | |||||||||||  |||| ||||| | |||||| |||||||| ||||||||||||||||||    
T  19562174 ttaaaaaataagtaatacaaattgtttggatgaaacgacaatacttgtggacacgatactttacttatcactttattac 19562252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 244
Target Start/End: Complemental strand, 23080439 - 23080367
Alignment:
Q  172 aaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttatta 244  Q
    ||||||||||||| ||||||||||   |||| |||||||||||| |||| ||| |||||||||||| ||||||    
T  23080439 aaataagtaacgcaaattgtttggttgaaacgacaatccatgtgaatacaatattctacttatcaccttatta 23080367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 171 - 233
Target Start/End: Complemental strand, 9052772 - 9052710
Alignment:
Q  171 aaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctactta 233  Q
    ||||||||||||| |||||||||||   |||||||||||  || |||||||||||||||||||    
T  9052772 aaaataagtaacgtgaattgtttggttgaaacaacaatctttgcggatacgatactctactta 9052710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 188 - 245
Target Start/End: Complemental strand, 15047210 - 15047153
Alignment:
Q  188 ttgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    |||||| ||| |||| | ||||||||| |||||||| |||||||||||||||||||||    
T  15047210 ttgtttagacgaaacgaaaatccatgtagatacgatcctctacttatcactttattac 15047153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 188 - 245
Target Start/End: Original strand, 15107214 - 15107271
Alignment:
Q  188 ttgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    |||||| ||| |||| | ||||||||| |||||||| |||||||||||||||||||||    
T  15107214 ttgtttagacgaaacgaaaatccatgtagatacgatcctctacttatcactttattac 15107271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 127
Target Start/End: Complemental strand, 12761479 - 12761387
Alignment:
Q  35 aaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgctctgttgcaaacagataaaattt 127  Q
    |||| ||||| || |||||||||| || |||||  |||| || ||  |||||||||| ||| ||||||||| ||||||||||| |||||||||    
T  12761479 aaatgaatagaggggattcaaagaatcataaccgctgctaacattgttgcaaccaaaacaggtaacttgctttgttgcaaacaaataaaattt 12761387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 106
Target Start/End: Complemental strand, 23645034 - 23644938
Alignment:
Q  12 atgaatgttatttaat-tccaacgaaataaataggggagattcaaagagtcctaaccattgcttac-ttttctgcaaccaaagcagataacttgctc 106  Q
    |||| ||||||||||| ||||||  ||||||||||||| |||| |||| |||||| |  ||||||| |||| |||||||||| ||| ||||||||||    
T  23645034 atgactgttatttaatatccaacataataaataggggaaattcgaagaatcctaaacgctgcttactttttttgcaaccaaaacaggtaacttgctc 23644938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 67
Target Start/End: Complemental strand, 9052926 - 9052877
Alignment:
Q  17 tgttatttaattccaacgaaataaataggggagattcaaagagtcctaacc 67  Q
    |||||||||||||||||| ||||||||| || |||||||||| ||||||||    
T  9052926 tgttatttaattccaacg-aataaatagaggggattcaaagaatcctaacc 9052877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 131
Target Start/End: Original strand, 11521041 - 11521153
Alignment:
Q  17 tgttatttaattccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgctctgttgcaaac 116  Q
    ||||| |||||| |||| |||| ||||| ||| ||||||||| |||||||||  ||| || || |||||| |||| |||  |||||||| ||||||||||    
T  11521041 tgttaattaatttcaac-aaatgaatagaggatattcaaagaatcctaaccaccgctaacatt-ctgcaatcaaaacaggcaacttgctttgttgcaaac 11521138  T
Q  117 agataaaatttgcaa 131  Q
    || ||||| ||||||    
T  11521139 aggtaaaaattgcaa 11521153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 67
Target Start/End: Complemental strand, 30600093 - 30600040
Alignment:
Q  13 tgaatgttatttaattccaacgaaataaataggggagattcaaagagtcctaacc 67  Q
    ||||||||| ||||||||||| ||||||||||||||||||  ||||||| |||||    
T  30600093 tgaatgttaattaattccaac-aaataaataggggagatttgaagagtcttaacc 30600040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 245
Target Start/End: Original strand, 43941815 - 43941861
Alignment:
Q  199 aaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    ||||||||||| ||||||||| |||||  ||||||||||||||||||    
T  43941815 aaacaacaatctatgtggataggataccttacttatcactttattac 43941861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 242
Target Start/End: Complemental strand, 10777464 - 10777392
Alignment:
Q  170 taaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttat 242  Q
    ||||| ||||||| ||| |||||| |   ||||||||||||  ||| |||| |||||||||||||||||||||    
T  10777464 taaaacaagtaacacgagttgtttagttgaaacaacaatccccgtgaatacaatactctacttatcactttat 10777392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 244
Target Start/End: Original strand, 12839813 - 12839853
Alignment:
Q  204 acaatccatgtggatacgatactctacttatcactttatta 244  Q
    ||||||| ||||||||||||||||||| ||||| |||||||    
T  12839813 acaatccttgtggatacgatactctacctatcattttatta 12839853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 132; Significance: 1e-68; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 12 - 245
Target Start/End: Original strand, 12805734 - 12805964
Alignment:
Q  12 atgaatgttatttaattccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgctctgttg 111  Q
    |||||||||||||||| ||||| ||||| ||||||   |||| |||| ||||||||  |||||||||||||||||||||| ||| ||| || ||||||||    
T  12805734 atgaatgttatttaatgccaacaaaatagataggg---attcgaagaatcctaacccctgcttacttttctgcaaccaaatcaggtaattttctctgttg 12805830  T
Q  112 caaacagataaaatttgcaatctttaacccttaactcttttattttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaatcca 211  Q
    ||||||||||||| ||||||||| |||||||| | |||||||||||||| |||| |||||||||||||||||| |||||||||||  |||| ||||||||    
T  12805831 caaacagataaaaattgcaatctctaaccctttaatcttttattttataacgtcgacttaaaataagtaacgcaaattgtttggatgaaacgacaatcca 12805930  T
Q  212 tgtggatacgatactctacttatcactttattac 245  Q
    |||||||| |||||||||||||||||||||||||    
T  12805931 tgtggatatgatactctacttatcactttattac 12805964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 35 - 244
Target Start/End: Original strand, 21303218 - 21303427
Alignment:
Q  35 aaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgctctgttgcaaacagataaaatttgcaatct 134  Q
    ||||||||||||| |||||||| | ||||||||  |||||||||||||||||||||| ||  |||||||||||||||||||||||||||| |||||||||    
T  21303218 aaataaataggggggattcaaataatcctaaccgctgcttacttttctgcaaccaaaacaagtaacttgctctgttgcaaacagataaaaattgcaatct 21303317  T
Q  135 ttaacccttaactcttttattttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttat 234  Q
     |||||||| ||||||||||||||||| |||||||||||||||||||||  |||||||||||  |||||||||||  ||||| |||||||||||||||||    
T  21303318 ctaaccctttactcttttattttatatagtcaacttaaaataagtaacggaaattgtttggatgaaacaacaatctttgtggctacgatactctacttat 21303417  T
Q  235 cactttatta 244  Q
    || |||||||    
T  21303418 cattttatta 21303427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 12 - 245
Target Start/End: Complemental strand, 21325597 - 21325365
Alignment:
Q  12 atgaatgttatttaat-tccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgctctgtt 110  Q
    |||| ||||||||||| |||||| ||||||||||||||  | | |||| || |||||  | ||||||||||||||||||||  || ||||||||||||||    
T  21325597 atgactgttatttaatatccaac-aaataaatagggga--tgcgaagaatcataaccgctacttacttttctgcaaccaaattaggtaacttgctctgtt 21325501  T
Q  111 gcaaacagataaaatttgcaatctttaaccctt-aactcttttattttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaatc 209  Q
    ||||| |||||||| ||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||| | |||||||||||| |||| |||||     
T  21325500 gcaaatagataaaaattgcaatctctaacccttcaactcttttattttatatcgttaacttaaaataagtaacacaaattgtttggacgaaacgacaatt 21325401  T
Q  210 catgtggatacgatactctacttatcactttattac 245  Q
      ||||||||||||||| ||||||||| ||||||||    
T  21325400 tttgtggatacgatactatacttatcagtttattac 21325365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 17 - 245
Target Start/End: Original strand, 16245575 - 16245803
Alignment:
Q  17 tgttatttaat-tccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaag-cagataacttgctctgttgcaa 114  Q
    ||||||||||| | |||| | ||||||||||| |||||  ||| | ||||||  ||||||||||||||||||||||  ||| ||||||||||||||||||    
T  16245575 tgttatttaatattcaacaatataaatagggg-gattcggagaattctaaccgctgcttacttttctgcaaccaaaaacaggtaacttgctctgttgcaa 16245673  T
Q  115 acagataaaatttgcaa-tctttaacccttaactcttttattttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaatccatg 213  Q
    | |||||||| |||||| ||| ||||||||||||||||||||||||   |||||  |||||||||||||| ||||||||||||| |||  | ||||||||    
T  16245674 atagataaaaattgcaaatctctaacccttaactcttttattttatt--gtcaaactaaaataagtaacgagaattgtttggacgaaatgataatccatg 16245771  T
Q  214 tggatacgatactctacttatcactttattac 245  Q
    |||||| |||||||||||||||||||||||||    
T  16245772 tggatatgatactctacttatcactttattac 16245803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 7 - 245
Target Start/End: Complemental strand, 8319310 - 8319064
Alignment:
Q  7 gtgagatgaatgttatttaat-tccaacgaaataaataggggag-attcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgc 104  Q
    |||| |||||||||||||||| |||||| ||||||||||||| | ||||||||||||||||||| ||||||||||| ||||||||||  || ||| ||||    
T  8319310 gtgacatgaatgttatttaatatccaacaaaataaatagggggggattcaaagagtcctaaccactgcttacttttatgcaaccaaaataggtaatttgc 8319211  T
Q  105 tctgttgcaaacagat------aaaatttgcaatctttaacccttaactcttttattttatatcgtcaacttaaaataagtaacgcgaattgtttggacc 198  Q
    | |||||| ||||||       |||| ||||||||| |||| |||| ||||| ||||||||||| |||||||||||||||||||  |||||||||| ||     
T  8319210 tatgttgctaacagaagaaaaaaaaaattgcaatctctaactcttatctcttgtattttatatcatcaacttaaaataagtaacatgaattgtttgtacg 8319111  T
Q  199 aaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    |||| | ||||| ||||||||| ||| |||||||||||||| |||||    
T  8319110 aaacgataatccctgtggatactatattctacttatcacttcattac 8319064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 12 - 245
Target Start/End: Original strand, 21825711 - 21825942
Alignment:
Q  12 atgaatgttatttaattccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgctctgttg 111  Q
    |||||||||||||||||||||| ||| | ||||||| ||||||||||||||||||  || ||||||||||||||||||||  || ||||||||| ||||     
T  21825711 atgaatgttatttaattccaacaaaa-acataggggggattcaaagagtcctaactcttacttacttttctgcaaccaaaaaaggtaacttgctatgtta 21825809  T
Q  112 caaacagataaaatttgcaatct-ttaacccttaactcttttattttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaatcc 210  Q
    ||||||||||||| ||||||||| ||| || | ||||||||  || ||| | || ||    |||||||||||||||| ||||||||| |||||| |||||    
T  21825810 caaacagataaaaattgcaatctcttatccatcaactctttatttatattttgttaa-accaaataagtaacgcgaactgtttggacgaaacaaaaatcc 21825908  T
Q  211 atgtggatacgatactctacttatcactttattac 245  Q
    ||||||||||||||||||||||| |||||||||||    
T  21825909 atgtggatacgatactctactta-cactttattac 21825942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 17 - 245
Target Start/End: Original strand, 2167463 - 2167691
Alignment:
Q  17 tgttatttaat-tccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgctctgttgcaaa 115  Q
    ||||||||||| |||||| | ||||||||||| ||||| |||| ||||||||| | ||||||||||  |||||||| ||| ||||||| | |||||||||    
T  2167463 tgttatttaatatccaacaatataaatagggg-gattcgaagaatcctaaccacttcttacttttccacaaccaaaacaggtaacttggtatgttgcaaa 2167561  T
Q  116 cagataaaatttgcaa-tctttaacccttaactcttttattttatatcgtcaa-cttaaaataagtaacgcgaattgtttggaccaaacaacaatccatg 213  Q
    ||||||||| |||||| ||| ||||| || ||||||||||||||||  ||||| || ||||||||||| | ||||||||||||| |||| ||| |  |||    
T  2167562 cagataaaaattgcaaatctctaaccatttactcttttattttata--gtcaaactaaaaataagtaatgtgaattgtttggacgaaacgacattttatg 2167659  T
Q  214 tggatacgatactctacttatcactttattac 245  Q
    ||||||||||||||||||||||||||||||||    
T  2167660 tggatacgatactctacttatcactttattac 2167691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 7 - 207
Target Start/End: Complemental strand, 17156053 - 17155855
Alignment:
Q  7 gtgagatgaatgttatttaattccaacgaaataa-ataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgct 105  Q
    |||| |||||||||||||||||||||| |||||| ||||||||  |||||| |||||||| |  | ||||||||||||||||||||  || |||||||||    
T  17156053 gtgacatgaatgttatttaattccaacaaaataatatagggga--ttcaaatagtcctaatcgctacttacttttctgcaaccaaat-aggtaacttgct 17155957  T
Q  106 ctgttgcaaacagataaaatttgcaatctttaacccttaactcttttattttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaac 205  Q
    ||||||||||||||||||| ||||||| | |||||| |||||||||| ||||||||||| ||  |||||||||||||  | |||||||| || |||||||    
T  17155956 ctgttgcaaacagataaaaattgcaatttctaacccgtaactctttttttttatatcgttaaactaaaataagtaacatggattgtttgaacgaaacaac 17155857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 12 - 191
Target Start/End: Original strand, 2723678 - 2723855
Alignment:
Q  12 atgaatgttatttaattccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgctctgttg 111  Q
    |||||||||||||||||||||| |||||||||| |||  |||||| |||| |||||  ||||||||||| |||||||||| ||| ||||||||| |||||    
T  2723678 atgaatgttatttaattccaacaaaataaatagagga--ttcaaatagtcttaaccgctgcttacttttttgcaaccaaa-caggtaacttgctttgttg 2723774  T
Q  112 caaacagataaaa-tttgcaatctttaacccttaactcttttattttatatcgtcaacttaaaataagtaacgcgaattgt 191  Q
    ||||||||||||| |||||||| | ||||||||||||| ||||||||||||| ||||  |||||||||||||  |||||||    
T  2723775 caaacagataaaaatttgcaatatctaacccttaactcatttattttatatcatcaaactaaaataagtaacatgaattgt 2723855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 73 - 245
Target Start/End: Original strand, 3116321 - 3116492
Alignment:
Q  73 ttacttttctgcaaccaaagc-agataacttgctctgttgcaaacagataaaatttgcaa-tct-ttaacccttaactcttttattttatatcgtcaact 169  Q
    ||||||||||||||||||| | || || ||||||||||||||||||||||||| |||||| ||| |||||||||| |||||| |||||||  ||||||||    
T  3116321 ttacttttctgcaaccaaaaccaggtatcttgctctgttgcaaacagataaaaattgcaaatctcttaacccttatctcttt-attttat--cgtcaact 3116417  T
Q  170 taaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    |||||||||||||| ||||||||||||| |||| ||||||| ||||||||| |||||| |||||||||||||||||    
T  3116418 taaaataagtaacgtgaattgtttggacgaaacgacaatccctgtggatactatactc-acttatcactttattac 3116492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 17 - 245
Target Start/End: Complemental strand, 41508620 - 41508392
Alignment:
Q  17 tgttatttaat-tccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgctctgttgcaaa 115  Q
    ||||||||||| |||||| | ||||| ||||| |||||||||| || |||||  || ||||||||||||||||||| ||  ||||||||| |||||||||    
T  41508620 tgttatttaatatccaacaatataaagagggg-gattcaaagaatcttaaccgctggttacttttctgcaaccaaaacatgtaacttgctttgttgcaaa 41508522  T
Q  116 cagataaaatttgc-aatctttaacccttaactcttttattttatatcgtcaactt-aaaataagtaacgcgaattgtttggaccaaacaacaatccatg 213  Q
    |||||| || |||| ||||| |||||||||||||||||||||  ||||||||| || ||||||||||| || |||||||||||| |||| |||||||  |    
T  41508521 cagatacaaattgcaaatctctaacccttaactcttttattt--tatcgtcaaattaaaaataagtaatgcaaattgtttggactaaacgacaatccccg 41508424  T
Q  214 tggatacgatactctacttatcactttattac 245  Q
      ||||||||| ||||| ||||||||||||||    
T  41508423 cagatacgatattctacctatcactttattac 41508392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 12 - 245
Target Start/End: Complemental strand, 8446077 - 8445848
Alignment:
Q  12 atgaatgttatttaattccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgctctgttg 111  Q
    ||||||||||||||| || || ||||| |||||||| |||||||||| ||||||||| ||||||| ||||||||||||| | || ||||||| |||||||    
T  8446077 atgaatgttatttaactcaaa-gaaatgaatagggg-gattcaaagaatcctaaccactgcttacatttctgcaaccaatggaggtaacttgttctgttg 8445980  T
Q  112 caaacagataaaatttgcaatctttaacccttaactcttttattttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaatcca 211  Q
    ||||| ||||||| ||||||||| ||||||  |||||||||||||||| |  |      |||| | |||||||||||| ||||||| |||| ||||||||    
T  8445979 caaactgataaaaattgcaatctctaaccccaaactcttttattttatttttttgttcaaaaacatgtaacgcgaatt-tttggacgaaacgacaatcca 8445881  T
Q  212 tgtggatacgatactctacttatcactttattac 245  Q
    |||||| || |||||||||||| |||||||||||    
T  8445880 tgtggacacaatactctactta-cactttattac 8445848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 37 - 242
Target Start/End: Original strand, 17438296 - 17438502
Alignment:
Q  37 ataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagat-aacttgctctgttgcaaacagataaaatttgcaatctt 135  Q
    |||||||| || ||||| |||| |||||||| ||||||||||||||||||||||| ||| | || |||||||||||||||||||||||| |||||| |||    
T  17438296 ataaatagaggggattcgaagaatcctaaccgttgcttacttttctgcaaccaaaacaggtaaaattgctctgttgcaaacagataaaaattgcaagctt 17438395  T
Q  136 taacccttaactcttttattttatatcgtc-aactt---aaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctact 231  Q
    |    || |||  || | | |||||||||| |||||   ||||||||||||| ||||||||||||| |||| |||||||||||||||| |||||||||||    
T  17438396 t----ctaaacctttatttattatatcgtcaaacttacaaaaataagtaacgtgaattgtttggacgaaacgacaatccatgtggatatgatactctact 17438491  T
Q  232 tatcactttat 242  Q
    ||||| |||||    
T  17438492 tatcattttat 17438502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 49 - 245
Target Start/End: Complemental strand, 4650447 - 4650256
Alignment:
Q  49 gattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataa-cttgctctgttgcaaacagataaaatttgcaa---tctttaaccctta 144  Q
    ||||| |||| |||||||| ||||||||||||||||||||||| ||| ||| ||||||| ||||||||||||||||| ||||||   | |||||||||||    
T  4650447 gattcgaagaatcctaaccgttgcttacttttctgcaaccaaaacaggtaaacttgctccgttgcaaacagataaaaattgcaagtctttttaaccctta 4650348  T
Q  145 actcttttattttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttatta 244  Q
    |||       ||| ||||||||||||||  ||||||||||||||||||||| | |||  ||||||| ||||||||||||||| |||| ||||||||||||    
T  4650347 act-------tttgtatcgtcaacttaa--taagtaacgcgaattgtttgggcgaaaggacaatccctgtggatacgatactttactcatcactttatta 4650257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 61 - 245
Target Start/End: Complemental strand, 20429920 - 20429735
Alignment:
Q  61 cctaaccattgcttacttttctgcaaccaaagcagataa-cttgctctgttgcaaacagataaaatttgcaatctt-taacccttaactcttttatttta 158  Q
    |||||||| || |||||||||||||||||||  |||||| |||||||||||||||||| |||||| |||||| ||| ||||||||| ||||||||||  |    
T  20429920 cctaaccactgattacttttctgcaaccaaaatagataaacttgctctgttgcaaacatataaaaattgcaaacttctaaccctta-ctcttttatt--a 20429824  T
Q  159 tatcgtcaa-cttaaaa-taagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    ||||||||| ||||||| ||||||||||||||||| ||||  |||  ||||||| | | ||||||||||||||||||||| ||||||||    
T  20429823 tatcgtcaaacttaaaaataagtaacgcgaattgtgtggatgaaatgacaatccttatagatacgatactctacttatcattttattac 20429735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 98 - 245
Target Start/End: Complemental strand, 21302090 - 21301943
Alignment:
Q  98 aacttgctctgttgcaaacagataaaatttgcaat-ctttaacccttaactcttttattttatatcgtcaactta---aaataagtaacgcgaattgttt 193  Q
    ||||||||||||||||||||||||||| || |||  || |||||| ||  |||||||||  |||||||||| |||   ||||||||||| ||||||||||    
T  21302090 aacttgctctgttgcaaacagataaaaattccaacactctaacccata--tcttttatt--atatcgtcaatttacaaaaataagtaactcgaattgttt 21301995  T
Q  194 ggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    |||| |||  ||||||||||||||||||||||||||||||||||||||||||    
T  21301994 ggacgaaatgacaatccatgtggatacgatactctacttatcactttattac 21301943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 35 - 245
Target Start/End: Complemental strand, 5508570 - 5508361
Alignment:
Q  35 aaataaataggggagattcaaagagtcct--aaccattgcttacttttctgcaaccaaag-cagataacttgctctgttgcaaacagataaaatttgcaa 131  Q
    ||||||||||||| ||||| |||| ||||  ||||| || ||||||||||||||| |||  ||  ||||||||||| |||||||||||||||| || |||    
T  5508570 aaataaatagggg-gattcgaagaatcctctaaccactg-ttacttttctgcaacaaaaaacatgtaacttgctctattgcaaacagataaaaatttcaa 5508473  T
Q  132 -tct-ttaacccttaactcttttattttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactcta 229  Q
     ||| |||||||||| |||||| |||||||  ||||| |||||||||||||||||||  ||||||||| |||| ||||||||||||||||  |||||| |    
T  5508472 atctcttaacccttatctcttt-attttat--cgtcaccttaaaataagtaacgcgagatgtttggacgaaacgacaatccatgtggatattatactc-a 5508377  T
Q  230 cttatcactttattac 245  Q
    ||||||||||||||||    
T  5508376 cttatcactttattac 5508361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 69 - 245
Target Start/End: Complemental strand, 10745102 - 10744927
Alignment:
Q  69 ttgcttacttttctgcaaccaaagcagataacttgctctgttgcaaacagataaaatttgc-aatctttaacccttaactcttttatt-ttatatcgtca 166  Q
    |||||||| |||||||||||||| ||| ||||||||||||||||||| |||||||| |||| ||||| | ||||| |||||||||||| | || | ||      
T  10745102 ttgcttacatttctgcaaccaaaacaggtaacttgctctgttgcaaatagataaaaattgcaaatctcttaccctcaactcttttattataattttgt-- 10745005  T
Q  167 acttaaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
      ||||||||| ||| | || |||||| ||| |||| ||||||| | |||| |||||||||||||||||||||||||||    
T  10745004 -tttaaaataattaatgtgatttgtttagacgaaacgacaatccctatggaaacgatactctacttatcactttattac 10744927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 55 - 245
Target Start/End: Original strand, 19925505 - 19925697
Alignment:
Q  55 aagagtcctaaccattgcttacttttctgcaa-ccaaagcagataa-cttgctctgttgcaaacagataaaatttgcaa---tcttt-aacccttaactc 148  Q
    |||| ||||||||  ||||||||||||||||| ||||| ||| ||| |||||||||||||||||| |||||||| ||||   ||||| |||||||||       
T  19925505 aagaatcctaaccgctgcttacttttctgcaaaccaaaacaggtaaacttgctctgttgcaaacatataaaatt-gcaagtctcttttaacccttaa--- 19925600  T
Q  149 ttttattttatatcgtcaacttaa----aataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttatta 244  Q
        |||||||||||| |||||||    ||||||||||||||||| ||||||| |||  ||||||||||||||||||||||||||| |||||| ||||||    
T  19925601 ----attttatatcgttaacttaataaaaataagtaacgcgaattatttggacgaaaagacaatccatgtggatacgatactctacatatcaccttatta 19925696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 12 - 127
Target Start/End: Complemental strand, 8143870 - 8143757
Alignment:
Q  12 atgaatgttatttaattccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgctctgttg 111  Q
    ||||| |||| ||||||||||| ||||||||||||| ||||| |||| |||||||| ||||||||||| ||||||||||| ||| ||||||| |||||||    
T  8143870 atgaacgttacttaattccaac-aaataaataggggggattccaagaatcctaaccgttgcttacttt-ctgcaaccaaaacaggtaacttgttctgttg 8143773  T
Q  112 caaacagataaaattt 127  Q
    |||||| | |||||||    
T  8143772 caaacaaaaaaaattt 8143757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 12 - 245
Target Start/End: Original strand, 18736515 - 18736745
Alignment:
Q  12 atgaatgttatttaattccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgctctgttg 111  Q
    |||||| ||||||||||||||| |||||||| ||| | ||| ||||| ||||||||  |||||| ||||||||||||||| ||| ||||||| || ||||    
T  18736515 atgaatattatttaattccaac-aaataaatggggta-atttaaagaatcctaaccgctgcttatttttctgcaaccaaaacaggtaacttgttcggttg 18736612  T
Q  112 caaacagat-aaaatttgcaatctttaacccttaactcttttatt--ttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaat 208  Q
    |||||| || ||||||   ||||| ||||||||||||||||||||   | ||  ||    |||||||||||||||||| |||||| ||| |||| ||||     
T  18736613 caaacaaataaaaattaaaaatctctaacccttaactcttttattcactttactgt---tttaaaataagtaacgcgagttgtttagacgaaacgacaac 18736709  T
Q  209 ccatgtggatacgatactctacttatcactttattac 245  Q
     | ||| ||||||||| ||||||||| ||||||||||    
T  18736710 acctgtagatacgatattctacttat-actttattac 18736745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 7 - 124
Target Start/End: Complemental strand, 8267195 - 8267077
Alignment:
Q  7 gtgagatgaatgttatttaat-tccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgct 105  Q
    |||| |||||||||||||||| |||||| ||||||||||||| |||||||||||||||||||  | || |||||| ||||||||||  || ||| |||||    
T  8267195 gtgacatgaatgttatttaatatccaacaaaataaataggggggattcaaagagtcctaaccgctactgacttttatgcaaccaaaataggtaatttgct 8267096  T
Q  106 ctgttgcaaacagataaaa 124  Q
    ||||||| |||||| ||||    
T  8267095 ctgttgctaacagaaaaaa 8267077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 172 - 244
Target Start/End: Complemental strand, 10918016 - 10917944
Alignment:
Q  172 aaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttatta 244  Q
    ||||| |||| ||||| ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  10918016 aaataggtaatgcgaactgtttagacgaaacaacaatccatgtggatacgatactctacttatcactttatta 10917944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 172 - 245
Target Start/End: Original strand, 8557130 - 8557203
Alignment:
Q  172 aaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    ||||||||||||| ||||||||  |  |||| ||||||||||||||||||||||||||||||||||||||||||    
T  8557130 aaataagtaacgcaaattgtttaaatgaaacgacaatccatgtggatacgatactctacttatcactttattac 8557203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 171 - 244
Target Start/End: Complemental strand, 22349508 - 22349435
Alignment:
Q  171 aaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttatta 244  Q
    ||||||||||| | ||||||||||||| |||| |||||  ||||||||||||||||||||||||||||||||||    
T  22349508 aaaataagtaatgtgaattgtttggacgaaacgacaatttatgtggatacgatactctacttatcactttatta 22349435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 176 - 245
Target Start/End: Complemental strand, 28729038 - 28728969
Alignment:
Q  176 aagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    ||||||||||||||||||||   |||| |||||| |||||||||||||||||||||||||||||||||||    
T  28729038 aagtaacgcgaattgtttggttgaaacgacaatctatgtggatacgatactctacttatcactttattac 28728969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 172 - 245
Target Start/End: Original strand, 821515 - 821588
Alignment:
Q  172 aaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    |||||||||||  |||||||||  || |||| | ||||||||||||||||||||||||||||||||||||||||    
T  821515 aaataagtaacatgaattgtttacacgaaacgaaaatccatgtggatacgatactctacttatcactttattac 821588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 171 - 245
Target Start/End: Original strand, 8889152 - 8889226
Alignment:
Q  171 aaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    ||||||||||||| |||||||| | || |||  ||||||| ||||||||| ||||||||||||||||||||||||    
T  8889152 aaaataagtaacgagaattgttcgaacgaaaggacaatccctgtggatacaatactctacttatcactttattac 8889226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 171 - 245
Target Start/End: Complemental strand, 12411250 - 12411176
Alignment:
Q  171 aaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    ||||||||||||   ||||||||| || |||| ||||||| |||||||||||||||||||| |||||||||||||    
T  12411250 aaaataagtaacctaaattgtttgtacgaaacgacaatccttgtggatacgatactctactaatcactttattac 12411176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 171 - 224
Target Start/End: Original strand, 7478335 - 7478388
Alignment:
Q  171 aaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgata 224  Q
    ||||||||||||| |||||||||||||||||| |||||| ||||||||||||||    
T  7478335 aaaataagtaacgtgaattgtttggaccaaacgacaatcaatgtggatacgata 7478388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 154 - 245
Target Start/End: Original strand, 19171814 - 19171908
Alignment:
Q  154 ttttatatcgtcaactta---aaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    ||||||||||||||| ||   |||||||||| || |||||||||||| |||| ||||||| |||| ||| ||| |||| ||||||||||||||||    
T  19171814 ttttatatcgtcaacctacaaaaataagtaatgcaaattgtttggacgaaacgacaatccttgtgaatatgatcctctgcttatcactttattac 19171908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 245
Target Start/End: Original strand, 31285852 - 31286088
Alignment:
Q  7 gtgagatgaatgttatttaattccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgctc 106  Q
    |||| |||||||||||||||||||||| ||| |||||| || ||||| || | || ||||   |||||||||||    |||||||  || ||||||||||    
T  31285852 gtgacatgaatgttatttaattccaac-aaagaaatagtggggattcgaataatcttaactgctgcttactttttgaaaaccaaaataggtaacttgctc 31285950  T
Q  107 tgttgcaaacagataaaatttgcaatc-tttaacccttaactcttttatttt-atatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaa 204  Q
    | ||| ||||| |||||| |||||||| |||| ||||  | ||||||||||| || | || ||    ||||||||||||  |||||||||||| |||| |    
T  31285951 tattgaaaacatataaaaattgcaatcttttatccctcgattcttttattttaattttgttaa-accaaataagtaacggaaattgtttggacgaaac-a 31286048  T
Q  205 caatccatgtggatacgatactctacttatcactttattac 245  Q
    |||||| ||||||||||||| |||| ||| |||||||||||    
T  31286049 caatccctgtggatacgatattctagtta-cactttattac 31286088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 49 - 131
Target Start/End: Complemental strand, 8770229 - 8770146
Alignment:
Q  49 gattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataa-cttgctctgttgcaaacagataaaatttgcaa 131  Q
    ||||| |||| |||||||   |||||||||||||||||||||| ||| ||| |||||||||||||||||| |||||| ||||||    
T  8770229 gattcgaagaatcctaactgctgcttacttttctgcaaccaaaacaggtaaacttgctctgttgcaaacatataaaaattgcaa 8770146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 70 - 131
Target Start/End: Complemental strand, 8765306 - 8765244
Alignment:
Q  70 tgcttacttttctgcaaccaaagcagataa-cttgctctgttgcaaacagataaaatttgcaa 131  Q
    |||||||||||||||||||||| ||| ||| |||||||||||||||||| |||||| ||||||    
T  8765306 tgcttacttttctgcaaccaaaacaggtaaacttgctctgttgcaaacatataaaaattgcaa 8765244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 172 - 245
Target Start/End: Complemental strand, 6290001 - 6289928
Alignment:
Q  172 aaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    |||||||||| ||||||||| |  || |||  | |||||||||||||| |||||||||||||||||||||||||    
T  6290001 aaataagtaatgcgaattgtctacacgaaatgataatccatgtggatatgatactctacttatcactttattac 6289928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 175 - 244
Target Start/End: Complemental strand, 8765212 - 8765143
Alignment:
Q  175 taagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttatta 244  Q
    ||||||||  ||||||||  ||| |||  ||||||||||||||||||||||| |||||||||||||||||    
T  8765212 taagtaacaagaattgttcagacaaaaggacaatccatgtggatacgatactttacttatcactttatta 8765143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 70 - 245
Target Start/End: Complemental strand, 932943 - 932767
Alignment:
Q  70 tgcttacttttctgcaaccaaagcagataa-cttgctctgttgcaaacagataaaatttgcaa-tcttt--aacccttaactcttttattttatatcgtc 165  Q
    |||||||||||||||||||||| ||  ||| |||||||||||||||||| |||||| ||| || |||||  |||| ||||||       |||||| ||||    
T  932943 tgcttacttttctgcaaccaaaacaagtaaacttgctctgttgcaaacaaataaaaattgtaagtcttttaaacctttaact-------tttataacgtc 932851  T
Q  166 aa-ctta---aaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    || ||||   |||||||||| | ||||| ||||||| |||  ||||||  |||||||||||||||||| |||||| ||||||||    
T  932850 aaacttataaaaataagtaatgtgaattttttggacgaaaggacaatctctgtggatacgatactctatttatcaatttattac 932767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 35 - 130
Target Start/End: Original strand, 20023416 - 20023512
Alignment:
Q  35 aaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataactt-gctctgttgcaaacagataaaatttgca 130  Q
    ||||| |||| || |||||||||| |||||||   | |||||||||||||||||||| | | ||| || |||||||||||||||||||||| |||||    
T  20023416 aaatatatagaggggattcaaagaatcctaactgctacttacttttctgcaaccaaaactggtaaattcgctctgttgcaaacagataaaaattgca 20023512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 175 - 245
Target Start/End: Complemental strand, 8770114 - 8770044
Alignment:
Q  175 taagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    ||||||||  ||||||||  ||| |||  |||||||||||||||| |||||| ||||||||||||||||||    
T  8770114 taagtaacaagaattgttcagacaaaaggacaatccatgtggatatgatactttacttatcactttattac 8770044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 179 - 245
Target Start/End: Complemental strand, 10923238 - 10923172
Alignment:
Q  179 taacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    ||||||||| ||||| ||  ||||||||||||  |||||||||||||| || |||||||||||||||    
T  10923238 taacgcgaactgtttagatgaaacaacaatcctcgtggatacgatactgtaattatcactttattac 10923172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 199 - 245
Target Start/End: Complemental strand, 12759458 - 12759412
Alignment:
Q  199 aaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    |||| ||||| | ||||||||||||||||||||||||||||||||||    
T  12759458 aaacgacaatacttgtggatacgatactctacttatcactttattac 12759412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 171 - 245
Target Start/End: Original strand, 16229942 - 16230016
Alignment:
Q  171 aaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    ||||||||||||  |||||||  |||| |||  ||||||| ||||||||||||||||||||||  ||||||||||    
T  16229942 aaaataagtaactagaattgtaaggacaaaaggacaatccctgtggatacgatactctacttactactttattac 16230016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 203 - 245
Target Start/End: Original strand, 18458456 - 18458498
Alignment:
Q  203 aacaatccatgtggatacgatactctacttatcactttattac 245  Q
    |||||||  ||||||||||||||||||||||||||||||||||    
T  18458456 aacaatctttgtggatacgatactctacttatcactttattac 18458498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 231
Target Start/End: Complemental strand, 19532364 - 19532319
Alignment:
Q  186 aattgtttggaccaaacaacaatccatgtggatacgatactctact 231  Q
    ||||||| |||| ||| |||||||||||||||||||||||||||||    
T  19532364 aattgttcggacgaaagaacaatccatgtggatacgatactctact 19532319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 244
Target Start/End: Complemental strand, 19908406 - 19908333
Alignment:
Q  171 aaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttatta 244  Q
    |||||| || ||| ||||||||||||| |||| || | || ||||||||||||||| ||||||||| |||||||    
T  19908406 aaaataggttacgtgaattgtttggacgaaacgacgacccttgtggatacgatactatacttatcattttatta 19908333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 227
Target Start/End: Original strand, 7495095 - 7495151
Alignment:
Q  171 aaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactc 227  Q
    |||||||||||||  |||||||||||| |||| || |||||||||||| ||||||||    
T  7495095 aaaataagtaacgttaattgtttggacgaaacgacgatccatgtggattcgatactc 7495151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 131
Target Start/End: Original strand, 16229831 - 16229915
Alignment:
Q  49 gattcaaagagtcctaaccattgcttacttttctgcaaccaaag-cagataactt-gctctgttgcaaacagataaaatttgcaa 131  Q
    ||||| |||| ||||||||  ||||||||||| ||||||||||  ||| ||| || |||||||||||||||||||||| ||||||    
T  16229831 gattcgaagaatcctaaccgctgcttacttttttgcaaccaaaaacaggtaaattcgctctgttgcaaacagataaaaattgcaa 16229915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 87
Target Start/End: Original strand, 19171731 - 19171782
Alignment:
Q  36 aataaataggggagattcaaagagtcctaaccattgcttacttttctgcaac 87  Q
    |||||||||||| ||||| |||| ||||||||| ||| ||||||||||||||    
T  19171731 aataaataggggtgattcgaagaatcctaaccactgcatacttttctgcaac 19171782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 243
Target Start/End: Original strand, 27542944 - 27542986
Alignment:
Q  200 aacaacaatccatgtggatacgatactctacttatcactttatt 243  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||    
T  27542944 aacaacaattcatgtggatacgatactctacttat-actttatt 27542986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 67
Target Start/End: Original strand, 821361 - 821410
Alignment:
Q  17 tgttatttaattccaacgaaataaataggggagattcaaagagtcctaacc 67  Q
    ||||||||||||||||| |||||||||| ||||||||| ||| ||||||||    
T  821361 tgttatttaattccaac-aaataaatagaggagattcagagaatcctaacc 821410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 229
Target Start/End: Complemental strand, 19167510 - 19167452
Alignment:
Q  171 aaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactcta 229  Q
    ||||||||||||  |||||||| |||| |||  | ||||||||||||||||||||||||    
T  19167510 aaaataagtaactagaattgttcggacgaaaggataatccatgtggatacgatactcta 19167452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 124
Target Start/End: Original strand, 12754800 - 12754877
Alignment:
Q  49 gattcaaagagtcctaaccattgcttacttttctgcaacc-aaagcagat-aacttgctctgttgcaaacagataaaa 124  Q
    ||||| |||| ||||||||  ||||||||||||||||||| ||| ||| | |||| ||||||||||||||| ||||||    
T  12754800 gattcgaagaatcctaaccgctgcttacttttctgcaaccaaaaccaggtaaactagctctgttgcaaacaaataaaa 12754877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 129; Significance: 7e-67; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 13 - 232
Target Start/End: Complemental strand, 13698111 - 13697893
Alignment:
Q  13 tgaatgttatttaat-tccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgctctgttg 111  Q
    ||||||||||||||| |||||| ||||||||||||| ||||||||||||| ||| || |||||||||||||||||||||| ||| |||||||||||||||    
T  13698111 tgaatgttatttaatatccaacaaaataaatagggg-gattcaaagagtcataatcactgcttacttttctgcaaccaaa-caggtaacttgctctgttg 13698014  T
Q  112 caaacagataaaatttgcaatctttaacccttaactcttttattttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaatcca 211  Q
    |||| |||||||| ||||||||| ||||||||| ||||| |||||||||||||||||||||||||||||||||   |||||||||| |||| | |||||     
T  13698013 caaagagataaaaattgcaatctctaacccttatctcttgtattttatatcgtcaacttaaaataagtaacgcaggttgtttggacgaaacgaaaatcct 13697914  T
Q  212 tgtggatacgatactctactt 232  Q
    |||||||||||||||||||||    
T  13697913 tgtggatacgatactctactt 13697893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 7 - 244
Target Start/End: Original strand, 25182262 - 25182501
Alignment:
Q  7 gtgagatgaatgttatttaatt-ccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaag-cagataacttgc 104  Q
    |||| ||||||||||||||||| ||||| || |||||| ||| |||||||||||||||||||| || || ||||||||||||||||  ||| ||||||||    
T  25182262 gtgacatgaatgttatttaatttccaacaaagtaaatatgggggattcaaagagtcctaaccactgtttccttttctgcaaccaaaaacaggtaacttgc 25182361  T
Q  105 tctgttgcaaacagataaaatttgcaatctttaacccttaactcttttattttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaa 204  Q
    ||||||||||| |||||||| ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| |   |||| ||| |||  |    
T  25182362 tctgttgcaaatagataaaaattgcaatctctaacccttatctcttttattttatatcgtcaacttaaaataagtaacgcaagcagtttagacgaaatga 25182461  T
Q  205 caatccatgtggatacgatactctacttatcactttatta 244  Q
    ||||||||||| |||||||||||||||| |||||||||||    
T  25182462 caatccatgtgaatacgatactctacttgtcactttatta 25182501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 70 - 245
Target Start/End: Complemental strand, 14528349 - 14528174
Alignment:
Q  70 tgcttacttttctgcaaccaaagcagataacttgctctgttgcaaacagataaaatttgcaatctttaacccttaactcttttattttatatcgtcaact 169  Q
    |||||||||||||||||||||| ||| ||||||||| |||||||||||| ||||| ||||||||| |||||||||||| ||||||||||||||||||  |    
T  14528349 tgcttacttttctgcaaccaaaccaggtaacttgctttgttgcaaacagctaaaaattgcaatctctaacccttaactattttattttatatcgtcagtt 14528250  T
Q  170 taaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    |||||||||||||| || |||||||||| |||| |||||| |||||||||||||||||||| ||||||||||||||    
T  14528249 taaaataagtaacgtgagttgtttggacgaaacgacaatctatgtggatacgatactctacgtatcactttattac 14528174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 7 - 245
Target Start/End: Complemental strand, 34497378 - 34497140
Alignment:
Q  7 gtgagatgaatgttatttaat-tccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgct 105  Q
    |||| |||||||||||||||| |||||| |||| |||||||| ||||||| || ||||||||  ||||||||||||||||| |||| ||| |||| ||||    
T  34497378 gtgacatgaatgttatttaatatccaac-aaatgaatagggg-gattcaaggaatcctaaccgctgcttacttttctgcaagcaaaccaggtaacatgct 34497281  T
Q  106 ctgttgcaaacagataaaatttgcaatctttaaccctt-aactcttttattttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaa 204  Q
     ||||||||| |||||||| ||||||||| |||||||| |||||||||||||||||||||||| ||||||||||||||| | ||||||||||| |||| |    
T  34497280 atgttgcaaaaagataaaaattgcaatctctaaccctttaactcttttattttatatcgtcaatttaaaataagtaacgtggattgtttggacgaaacga 34497181  T
Q  205 caatccatgtggatacgatactctacttatcactttattac 245  Q
    || ||  | |||||||||||||||||| |||||||||||||    
T  34497180 cagtctctatggatacgatactctactaatcactttattac 34497140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 12 - 245
Target Start/End: Complemental strand, 19786991 - 19786756
Alignment:
Q  12 atgaatgttatttaat-tccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaag-cagataacttgctctgt 109  Q
    ||||||| | |||||| |||||| || |||||| |||  |||||||||||||||||||||| || ||||||| ||| ||||  ||  |||||||||||||    
T  19786991 atgaatgctttttaatatccaacaaagtaaataaggggaattcaaagagtcctaaccattgtttccttttctacaatcaaaaacatgtaacttgctctgt 19786892  T
Q  110 tgcaaacagataaaatttgcaatctttaacccttaactcttttattttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaatc 209  Q
    ||||||||||||||| || |||||| ||||  ||| ||||||||||||||||| ||||||||||| ||||||| ||| |||||||||| |||| ||| ||    
T  19786891 tgcaaacagataaaaattacaatctctaacttttatctcttttattttatatcatcaacttaaaacaagtaacacgagttgtttggacgaaacgacagtc 19786792  T
Q  210 catgtggatacgatactctacttatcactttattac 245  Q
    | | |||||| |||||| ||||| ||||||||||||    
T  19786791 cctatggatatgatactttacttgtcactttattac 19786756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 12 - 245
Target Start/End: Original strand, 13314833 - 13315066
Alignment:
Q  12 atgaatgttatttaat-tccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaag-cagataactt-gctctg 108  Q
    |||||||||||||||| |||||| | ||||||||||||  ||| |||| || ||||| |||||||||||||||||||||||  ||| ||| || | || |    
T  13314833 atgaatgttatttaatatccaacaatataaatagggga--ttcgaagaatcttaaccgttgcttacttttctgcaaccaaaaacaggtaaatttgttcag 13314930  T
Q  109 ttgcaaacagataaaatttgcaa-tctttaacccttaactcttttattttatatcgtcaactta--aaataagtaacgcgaattgtttggaccaaacaac 205  Q
    ||||||||| |||||| |||||| ||| ||||  |||  |||||||||  ||||||||||||||  |||||||||||||||||||||||||| ||||||     
T  13314931 ttgcaaacatataaaaattgcaactctctaacgttta--tcttttatt--atatcgtcaacttataaaataagtaacgcgaattgtttggacgaaacaaa 13315026  T
Q  206 aatccatgtggatacgatactctacttatcactttattac 245  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  13315027 aatccatgtggatacgatactatacttatcactttattac 13315066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 18 - 245
Target Start/End: Original strand, 30122002 - 30122228
Alignment:
Q  18 gttatttaattccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgctctgttgcaaaca 117  Q
    |||||||||||||||| |||||||||||||  |||||||||||  |||||| ||||||||||||||||||||||  || |||||| ||||||| ||||||    
T  30122002 gttatttaattccaac-aaataaatagggggaattcaaagagttataaccactgcttacttttctgcaaccaaaataggtaacttactctgttacaaaca 30122100  T
Q  118 gataaaatttgcaatct--ttaacccttaactcttttattttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaatccatgtg 215  Q
    ||||||| ||||||| |  ||| |||| ||||||||  || ||| | || ||    |||||||||| ||||||||||||||| |||  ||||||||||||    
T  30122101 gataaaaattgcaattttcttatccctcaactctttatttatattttgttaa-gccaaataagtaatgcgaattgtttggacaaaatgacaatccatgtg 30122199  T
Q  216 gatacgatactctacttatcactttattac 245  Q
    |||| ||||||||||||| |||||||||||    
T  30122200 gatatgatactctactta-cactttattac 30122228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 49 - 245
Target Start/End: Original strand, 30806379 - 30806571
Alignment:
Q  49 gattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgctctgttgcaaacagataaaatttgcaatctttaacccttaactc 148  Q
    ||||||||||||| ||||   |||||||||||||||||||||| |||  ||||| |||        |||||||||| ||||||||| |||||||||||||    
T  30806379 gattcaaagagtcataactgctgcttacttttctgcaaccaaa-caggcaactttctc--------acagataaaaattgcaatctctaacccttaactc 30806469  T
Q  149 ttttattttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaatccatg-----tggatacgatactctacttatcactttatt 243  Q
    |||||||||||||||||||  ||||||||||||||| |||||||||||  |||| ||||||| ||     ||||||||||||||||||||||||||||||    
T  30806470 ttttattttatatcgtcaaactaaaataagtaacgcaaattgtttggatgaaacgacaatccttgtggactggatacgatactctacttatcactttatt 30806569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 28 - 245
Target Start/End: Original strand, 24114140 - 24114356
Alignment:
Q  28 tccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataa-cttgctctgttgcaaacagataaaatt 126  Q
    |||||| | ||||||||||| ||||| |||| ||||||||  |||||||||||| |  |||||| ||| ||| ||||||||| ||||||||||||||| |    
T  24114140 tccaacaatataaataggggggattcgaagaatcctaaccgctgcttacttttcagataccaaaacaggtaaacttgctctgctgcaaacagataaaaat 24114239  T
Q  127 tgcaatctttaacccttaactcttttattttatatcgtcaactta---aaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgat 223  Q
    ||||| |||||     |||| ||| | ||||||||||||||||||   ||||||||||||| | |||||||||| |||| ||||||| || |||||||||    
T  24114240 tgcaaccttta-----taacccttatcttttatatcgtcaacttacaaaaataagtaacgcaagttgtttggacgaaacgacaatccctgcggatacgat 24114334  T
Q  224 actctacttatcactttattac 245  Q
    ||||||||||||| ||||||||    
T  24114335 actctacttatcattttattac 24114356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 55 - 245
Target Start/End: Original strand, 29382244 - 29382435
Alignment:
Q  55 aagagtcctaaccattgcttacttttctgcaaccaaagc-agata-acttgctctgttgcaaacagataaaatttgcaatcttt--aacccttaactctt 150  Q
    |||| ||||||||| ||||||||||||||||||||||   || || ||||||| |||||||||||||||||| |||||| ||||  |||| ||||||       
T  29382244 aagaatcctaaccactgcttacttttctgcaaccaaaaataggtacacttgctatgttgcaaacagataaaaattgcaagctttctaaccattaact--- 29382340  T
Q  151 ttattttatatcgtcaa-ctta---aaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
        ||||||||||||| ||||   ||||||||||||| |||||||||||  |||| ||||||| ||||||||||||||||||||||||||||||||||    
T  29382341 ----tttatatcgtcaaacttacaaaaataagtaacgcaaattgtttggatgaaacgacaatccctgtggatacgatactctacttatcactttattac 29382435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 12 - 134
Target Start/End: Complemental strand, 7983837 - 7983717
Alignment:
Q  12 atgaatgttatttaattccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgctctgttg 111  Q
    ||||||||| ||||| |||||| ||||||||||||| |||||||||| ||||| || ||||||||||||||||||||||| |||  |||||||| ||| |    
T  7983837 atgaatgtt-tttaaatccaacaaaataaatagggg-gattcaaagaatcctacccgttgcttacttttctgcaaccaaaccaggcaacttgctatgtcg 7983740  T
Q  112 caaacagataaaatttgcaatct 134  Q
    ||||||||||||| |||||||||    
T  7983739 caaacagataaaaattgcaatct 7983717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 73 - 245
Target Start/End: Complemental strand, 6885155 - 6884983
Alignment:
Q  73 ttacttttctgcaaccaaag-cagataacttgctctgttgcaaacagataaaatttgcaa-tctttaa-cccttaactcttttattttatatcgtcaa-c 168  Q
    |||| ||||||||||||||  ||| |||||| |||| || ||||||||||||| |||||| ||| ||| |||||| |||||| |||||||  |||||| |    
T  6885155 ttacatttctgcaaccaaaaacaggtaacttactctattacaaacagataaaaattgcaaatctctaaacccttatctcttt-attttat--cgtcaaac 6885059  T
Q  169 ttaaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    |||||||||||| ||| | |||||||||| |||| ||||||||||| |||||||||||| |||||||||||||||||    
T  6885058 ttaaaataagtagcgcaagttgtttggacgaaacgacaatccatgtagatacgatactc-acttatcactttattac 6884983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 70 - 245
Target Start/End: Complemental strand, 17509445 - 17509271
Alignment:
Q  70 tgcttacttttctgcaaccaaagcagataa-cttgctctgttgcaaacagataaaatttgcaa-tcttt-aacccttaactcttttattttatatcgtca 166  Q
    ||||||||||| |||||| ||| ||| ||| |||||||| |||||||||| | ||| |||||| ||||| ||||||||| |       |||||| |||||    
T  17509445 tgcttacttttttgcaacaaaaacaggtaaacttgctctattgcaaacaggtgaaaattgcaagtcttttaacccttaatt-------tttataccgtca 17509353  T
Q  167 actta---aaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    |||||   |||||||||| | ||||||||||||| ||| ||||||||||||||||| |||||||||||||||||||||||||    
T  17509352 acttataaaaataagtaaagagaattgtttggacgaaagaacaatccatgtggatatgatactctacttatcactttattac 17509271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 169 - 245
Target Start/End: Complemental strand, 2637699 - 2637623
Alignment:
Q  169 ttaaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    ||||||||||||||| || |||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  2637699 ttaaaataagtaacgggagttgtttagacgaaacgacaatccatgtggatacgatactctacttatcactttattac 2637623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 20 - 245
Target Start/End: Complemental strand, 24269848 - 24269623
Alignment:
Q  20 tatttaat-tccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaag-cagataacttgctctgttgcaaaca 117  Q
    |||||||| |||||| | ||||| ||||| ||||| |||| ||||||||  ||||||||||||||||||||||  ||| |||  | ||||||||||||||    
T  24269848 tatttaatatccaacaatataaacaggggggattcgaagaatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaactactctgttgcaaaca 24269749  T
Q  118 gataaaatttgcaatctttaacccttaactcttttattttatatcgtcaa-ctta---aaataagtaacgcgaattgtttggaccaaacaacaatccatg 213  Q
    ||||||  ||||||   || |     ||||||| | ||||||| |||||| ||||   |||||| ||| | ||||||||||||| |||| ||||||| ||    
T  24269748 gataaagattgcaactattca-----aactcttattttttataccgtcaaacttacaaaaataaataatgtgaattgtttggacgaaacgacaatccctg 24269654  T
Q  214 tggatacgatactctacttatcactttattac 245  Q
    |||||||||||||||||||| |||||||||||    
T  24269653 tggatacgatactctactta-cactttattac 24269623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 154 - 245
Target Start/End: Complemental strand, 27659564 - 27659470
Alignment:
Q  154 ttttatatcgtcaactta---aaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    ||||||||||||||||||   ||||||||||| || | ||||||||| |||| ||||||| ||| ||||||||||||||||||||||||||||||    
T  27659564 ttttatatcgtcaacttacaaaaataagtaactcggaatgtttggacgaaacgacaatccttgtagatacgatactctacttatcactttattac 27659470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 28 - 245
Target Start/End: Original strand, 18448398 - 18448616
Alignment:
Q  28 tccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaag-cagataacttgctctgttgcaaacagataaaatt 126  Q
    |||||| | ||| ||||| | ||| |||||| || ||||| |||||||||||| ||||||||||  ||| ||||||||||||||||||||||||||||      
T  18448398 tccaacaatatatataggagggatacaaagaatcataaccgttgcttacttttatgcaaccaaaaacaggtaacttgctctgttgcaaacagataaaaac 18448497  T
Q  127 tgcaa-tctttaacccttaactcttttattttatatcgtcaactt---aaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacga 222  Q
    |||||  ||||    || | |  || | |||||||||||||||||   ||||||||||||| ||||||||||||| |||| ||||||  | | |||||||    
T  18448498 tgcaagacttt----ctaaccatttatcttttatatcgtcaacttataaaaataagtaacgagaattgtttggacaaaacgacaatctctattgatacga 18448593  T
Q  223 tactctacttatcactttattac 245  Q
    | ||||| |||| ||||||||||    
T  18448594 tgctctaattattactttattac 18448616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 28 - 126
Target Start/End: Original strand, 24110526 - 24110625
Alignment:
Q  28 tccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagat-aacttgctctgttgcaaacagataaaatt 126  Q
    |||||| | ||||| ||||| ||||| || | ||||||||  |||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||    
T  24110526 tccaacaatataaacaggggggattcgaataatcctaacccctgcttacttttctgcaaccaaaacagataaacttcctctgttgcaaacagataaaatt 24110625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 12 - 245
Target Start/End: Complemental strand, 24645097 - 24644863
Alignment:
Q  12 atgaatgttatttaattccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaag-cagataactt-gctctgt 109  Q
    ||||| |||||||||||||||| |||| |||||||| |||||||||| |||| |  | ||||||||||||||||||||||  ||| |||||| | | |||    
T  24645097 atgaaagttatttaattccaac-aaatgaatagggg-gattcaaagattccttaaaactgcttacttttctgcaaccaaaaacaggtaactttgttatgt 24645000  T
Q  110 tgcaaacagataaaat--ttgcaatctttaacccttaactcttttatttta-tatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaaca 206  Q
    |||||| ||||||||   ||||||||| || || |  |||||||||||||| | | || ||   ||| ||||||| ||||||| ||||||  |||| | |    
T  24644999 tgcaaatagataaaaaaattgcaatctctatccttcgactcttttattttaattttgttaaaccaaa-taagtaatgcgaattatttggaaaaaacgata 24644901  T
Q  207 atccatgtggatacgatactctacttatcactttattac 245  Q
    |||||||||||||| |||||||||||| |||||||||||    
T  24644900 atccatgtggatacaatactctactta-cactttattac 24644863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 172 - 245
Target Start/End: Complemental strand, 5851039 - 5850966
Alignment:
Q  172 aaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    ||||||||||| || |||||||||   |||| |||||| |||||||||||||||||||||||||||||||||||    
T  5851039 aaataagtaacacggattgtttggttgaaacgacaatctatgtggatacgatactctacttatcactttattac 5850966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 98 - 245
Target Start/End: Complemental strand, 21314794 - 21314648
Alignment:
Q  98 aacttgctctgttgcaaacagataaaatttgcaatctt-taacccttaactcttttattttatatcgtcaacttaaaataagtaacgcgaattgtttgga 196  Q
    |||||||||| ||| || ||||||||  |||||| ||| ||||| ||||||||| ||||  |||| |  |||| ||||||||||||| | |||||||| |    
T  21314794 aacttgctctattgtaagcagataaatattgcaaacttctaacctttaactcttctatt--atattggtaactaaaaataagtaacgagtattgtttgca 21314697  T
Q  197 ccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    | |||| | ||||| ||| |||||||||| |||||||||||||||||||    
T  21314696 cgaaacgaaaatccctgtagatacgatacactacttatcactttattac 21314648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 173 - 245
Target Start/End: Complemental strand, 15238896 - 15238824
Alignment:
Q  173 aataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    ||||||||||||||||||||| ||| |||| ||||| ||||||||||||||| ||||||||||| ||| ||||    
T  15238896 aataagtaacgcgaattgtttagacgaaacgacaattcatgtggatacgataatctacttatcattttcttac 15238824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 172 - 245
Target Start/End: Complemental strand, 14075692 - 14075619
Alignment:
Q  172 aaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    |||||||||||||  |||||||||   |||| ||||||||||||||||||||| ||||||||||||||| ||||    
T  14075692 aaataagtaacgcacattgtttggttgaaacgacaatccatgtggatacgatagtctacttatcactttcttac 14075619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 116
Target Start/End: Original strand, 26394544 - 26394644
Alignment:
Q  17 tgttatttaat-tccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagat-aacttgctctgttgcaa 114  Q
    ||||||||||| || ||| | ||||||||||| ||||| |||| |||||||| ||||||||||||||||||||||| ||| | |||||||| ||||||||    
T  26394544 tgttatttaatatctaacaatataaatagggg-gattcgaagaatcctaaccgttgcttacttttctgcaaccaaaacaggtaaacttgctttgttgcaa 26394642  T
Q  115 ac 116  Q
    ||    
T  26394643 ac 26394644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 151
Target Start/End: Complemental strand, 9642129 - 9641995
Alignment:
Q  17 tgttatttaattccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgctctgttgcaaac 116  Q
    ||||||||||||||||| |||| |||||||| |||||||||| |  |||||  |||| || |||||||||| ||| ||  ||| |||||||||||||| |    
T  9642129 tgttatttaattccaac-aaatgaatagggg-gattcaaagaattttaaccgctgctaacatttctgcaactaaaacaagtaatttgctctgttgcaagc 9642032  T
Q  117 agataaaatttgca-atct-ttaacccttaactcttt 151  Q
    |||||||| ||||| |||| |||||||| ||||||||    
T  9642031 agataaaaattgcacatctcttaaccctcaactcttt 9641995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 154 - 245
Target Start/End: Original strand, 17101873 - 17101967
Alignment:
Q  154 ttttatatcgtcaacttaaaa---taagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    ||||||| |||||||||| ||   |||||||| |  ||||||||||  |||| ||||||| | ||||||||||||||||||||||||||||||||    
T  17101873 ttttataccgtcaacttacaaatataagtaacacatattgtttggatgaaacgacaatccctatggatacgatactctacttatcactttattac 17101967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 172 - 244
Target Start/End: Complemental strand, 24904731 - 24904659
Alignment:
Q  172 aaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttatta 244  Q
    |||||||||| | ||||||||| ||| |||| ||||||  |||||||| ||||||||||||||||||||||||    
T  24904731 aaataagtaatgtgaattgtttagacgaaacgacaatcactgtggatatgatactctacttatcactttatta 24904659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 72 - 245
Target Start/End: Original strand, 44010924 - 44011097
Alignment:
Q  72 cttacttttctgcaaccaaag-cagataacttgctctgttgcaaacagataaaatttgcaatctttaacccttaactcttttatttt-atatcgtcaact 169  Q
    |||||| |||||||||||||  ||  ||||||| ||||||||||||| |||||| ||||||||| || |  | || ||||||||||| || | || ||      
T  44010924 cttactcttctgcaaccaaaaacatgtaacttgttctgttgcaaacatataaaaattgcaatctctatcattcaaatcttttatttttattttgttaaac 44011023  T
Q  170 taaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
     ||| || |||||| ||||  ||| ||| |||| |||||||||||||||||||||||||||||| |||||||||||    
T  44011024 caaa-tatgtaacgtgaatcattttgacgaaacgacaatccatgtggatacgatactctactta-cactttattac 44011097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 171 - 245
Target Start/End: Original strand, 23893201 - 23893275
Alignment:
Q  171 aaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    ||||||||||||  |||||||| |||| ||| ||||||| |||| |||| ||||||||||||||||||| |||||    
T  23893201 aaaataagtaacaagaattgttcggacaaaagaacaatctatgttgatatgatactctacttatcacttcattac 23893275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 171 - 245
Target Start/End: Complemental strand, 25226235 - 25226161
Alignment:
Q  171 aaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    |||||| ||||||| |||||||||||  |||||| ||||| |||  ||||||||||| |||||||||||||||||    
T  25226235 aaaatatgtaacgcaaattgtttggaggaaacaataatccctgtatatacgatactcaacttatcactttattac 25226161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 172 - 245
Target Start/End: Complemental strand, 17976717 - 17976644
Alignment:
Q  172 aaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    |||||||||| ||||| ||| | ||| |||| | ||||  ||||||||||||||||||||||||||||||||||    
T  17976717 aaataagtaatgcgaaatgtgtagacgaaacgaaaatctttgtggatacgatactctacttatcactttattac 17976644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 204 - 245
Target Start/End: Original strand, 30783774 - 30783815
Alignment:
Q  204 acaatccatgtggatacgatactctacttatcactttattac 245  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  30783774 acaatctatgtggatacgatactctacttatcactttattac 30783815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 171 - 230
Target Start/End: Complemental strand, 16404011 - 16403952
Alignment:
Q  171 aaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctac 230  Q
    ||||||||||||  |||||||| |||| |||  |||||||||||||||||||||||||||    
T  16404011 aaaataagtaacaagaattgttcggacgaaaggacaatccatgtggatacgatactctac 16403952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 131
Target Start/End: Original strand, 23893091 - 23893174
Alignment:
Q  49 gattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagat-aacttgctctgttgcaaacagataaaatttgcaa 131  Q
    |||||||||| ||||||| | |  ||||||||||||||||||| ||| | || ||||| |||||||||||||||||| ||||||    
T  23893091 gattcaaagaatcctaactactagttacttttctgcaaccaaaacaggtaaatttgctttgttgcaaacagataaaaattgcaa 23893174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 245
Target Start/End: Original strand, 5052923 - 5052995
Alignment:
Q  172 aaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    ||||||||| || ||||||||| |||  ||||| ||| ||||||||||| |||||||||||| |||||||||||    
T  5052923 aaataagtagcgtgaattgtttagacgcaacaa-aattcatgtggatacaatactctacttagcactttattac 5052995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 210 - 245
Target Start/End: Original strand, 24723480 - 24723515
Alignment:
Q  210 catgtggatacgatactctacttatcactttattac 245  Q
    ||||||||||||||||| ||||||||||||||||||    
T  24723480 catgtggatacgatactttacttatcactttattac 24723515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 124
Target Start/End: Original strand, 17101793 - 17101859
Alignment:
Q  60 tcctaaccattgcttacttttctgcaaccaaag-cagataa-cttgctctgttgcaaacagataaaa 124  Q
    ||||||||| ||||||||||| ||||| ||||  ||| ||| |||||||||||||||||||||||||    
T  17101793 tcctaaccactgcttacttttttgcaatcaaaaacaggtaaacttgctctgttgcaaacagataaaa 17101859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 124
Target Start/End: Complemental strand, 18569278 - 18569200
Alignment:
Q  47 gagattcaaagagtcctaaccattgcttacttttctgcaaccaaagc-agataacttgctctgttgcaaacagataaaa 124  Q
    |||||||||| | || |||||  |||||||||||||||||||||| | ||  |||| ||| ||||||||||||||||||    
T  18569278 gagattcaaaaaatcgtaaccgctgcttacttttctgcaaccaaaacaagtaaactcgctatgttgcaaacagataaaa 18569200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 245
Target Start/End: Complemental strand, 19264141 - 19264067
Alignment:
Q  171 aaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    ||||||||||||| |||||  || ||  ||| |||||||||| || ||||||||||  |||||||||||||||||    
T  19264141 aaaataagtaacgagaattaatttgatgaaagaacaatccatatgaatacgatacttaacttatcactttattac 19264067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 240
Target Start/End: Original strand, 28276685 - 28276826
Alignment:
Q  97 taacttgctctgttgcaaacagataaaatttgcaa-tct-ttaacccttaactcttttattttatatcgtcaacttaaaataagtaacgcgaattgtttg 194  Q
    ||||||||||||||  ||| |||||||| |||||| ||| |||| ||||| |||||| |||||||   |||||||| ||||||||||   || || ||||    
T  28276685 taacttgctctgttttaaatagataaaaattgcaaatctcttaatccttatctcttt-attttatt--gtcaacttcaaataagtaagaggagttatttg 28276781  T
Q  195 gaccaaacaacaatccatgtggatacgatactctacttatcacttt 240  Q
    ||| |||| | ||||| | |||||||||||||| ||||||||||||    
T  28276782 gacaaaactataatccctatggatacgatactc-acttatcacttt 28276826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 200 - 245
Target Start/End: Complemental strand, 14006165 - 14006120
Alignment:
Q  200 aacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    ||||||||| |||||| ||| |||||||||||||||| ||||||||    
T  14006165 aacaacaattcatgtgaatatgatactctacttatcattttattac 14006120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 245
Target Start/End: Complemental strand, 17972236 - 17972196
Alignment:
Q  204 acaatccatgtggatacgatactctacttatcactttattac 245  Q
    |||||||||| ||||||||||||||||||| |||||||||||    
T  17972236 acaatccatgcggatacgatactctactta-cactttattac 17972196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 212 - 245
Target Start/End: Original strand, 24110696 - 24110729
Alignment:
Q  212 tgtggatacgatactctacttatcactttattac 245  Q
    ||||||||||||||||||||||||| ||||||||    
T  24110696 tgtggatacgatactctacttatcattttattac 24110729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 199 - 244
Target Start/End: Original strand, 26615270 - 26615315
Alignment:
Q  199 aaacaacaatccatgtggatacgatactctacttatcactttatta 244  Q
    |||| ||||| ||| ||||||| |||||||||||||||||||||||    
T  26615270 aaacgacaattcatatggatacaatactctacttatcactttatta 26615315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 182
Target Start/End: Original strand, 26394648 - 26394693
Alignment:
Q  136 taacccttaactcttttattttatatcgtcaactt-aaaataagtaac 182  Q
    ||||||||||||||||||  ||||||||||||||| ||||||||||||    
T  26394648 taacccttaactctttta--ttatatcgtcaacttaaaaataagtaac 26394693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 123; Significance: 3e-63; HSPs: 53)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 28 - 245
Target Start/End: Original strand, 12183188 - 12183405
Alignment:
Q  28 tccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgctctgttgcaaacagataaaattt 127  Q
    |||||| | ||||||||||| ||||| |||| |||||||| ||||||||||||||| ||||||| ||| ||||||||| |||||||||||||||||  ||    
T  12183188 tccaacaatataaatagggg-gattcgaagaatcctaaccgttgcttacttttctgtaaccaaaacaggtaacttgctatgttgcaaacagataaacatt 12183286  T
Q  128 gcaatctttaacccttaa-ctcttttattttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatact 226  Q
    ||||||| ||||| |||| ||||||||||||||||||||| |||||||||||||||| |||||||| |||| |||  |||||||||||||||||||||||    
T  12183287 gcaatctctaacctttaaactcttttattttatatcgtcaccttaaaataagtaacgtgaattgttaggacgaaatgacaatccatgtggatacgatact 12183386  T
Q  227 ctacttatcactttattac 245  Q
     ||||||||||||||||||    
T  12183387 gtacttatcactttattac 12183405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 7 - 244
Target Start/End: Original strand, 28933494 - 28933733
Alignment:
Q  7 gtgagatgaatgttatttaat-tccaacgaaataaata-ggggagattcaaagagtcctaaccattgcttacttttctgcaaccaa-agcagataacttg 103  Q
    |||| |||||||||||||||| |||||| || |||||| |||| |||||||||||||||||||  || || ||||| ||||||||| | ||  |||||||    
T  28933494 gtgacatgaatgttatttaatatccaacaaattaaataaggggggattcaaagagtcctaaccgctgtttcctttt-tgcaaccaagaacaagtaacttg 28933592  T
Q  104 ctctgttgcaaacagataaaatttgcaatctttaacccttaactcttttattttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaaca 203  Q
    ||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||| ||||||||||||||| ||| | |||||||||||| ||||     
T  28933593 ctctgttgcaaacagataaaaattgcaatctctaacccttatctcttttattttatatcatcaacttaaaataagcaacacaaattgtttggacgaaacg 28933692  T
Q  204 acaatccatgtggatacgatactctacttatcactttatta 244  Q
    | ||||| |||||||||||||||||||||||||||||||||    
T  28933693 ataatccttgtggatacgatactctacttatcactttatta 28933733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 15 - 245
Target Start/End: Complemental strand, 22568093 - 22567865
Alignment:
Q  15 aatgttatttaattccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgctctgttgcaa 114  Q
    |||||||||||| |||||| ||| |||||||||  |||||||||||| | ||| |||||||||||||||||||||||  || |||||  |||||||||||    
T  22568093 aatgttatttaaatccaacaaaacaaataggggt-attcaaagagtcattaccgttgcttacttttctgcaaccaaactaggtaactgactctgttgcaa 22567995  T
Q  115 acagataaaatttgcaatctttaacccttaactcttttattttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaatccatgt 214  Q
    ||||||||||||  |||||| ||||||||||| ||||||||||||||||| |||||||||||||||||| || |||||||||| |||| |||||||||||    
T  22567994 acagataaaatta-caatctctaacccttaacccttttattttatatcgttaacttaaaataagtaacgtgagttgtttggacgaaaccacaatccatgt 22567896  T
Q  215 ggatacgatactctacttatcactttattac 245  Q
    |||||| ||||| ||||| |||| |||||||    
T  22567895 ggatacaatactatacttttcacgttattac 22567865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 55 - 245
Target Start/End: Complemental strand, 9838571 - 9838381
Alignment:
Q  55 aagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgctctgttgcaaacagataaaatttgcaatctttaacccttaactcttttat 154  Q
    |||| |||||||||||||||||||||||||||||||| | | ||||||||||| |||||||||||||||| || |||||| |||| ||| ||||||||||    
T  9838571 aagaatcctaaccattgcttacttttctgcaaccaaaacgggtaacttgctcttttgcaaacagataaaaattacaatctctaacgcttcactcttttat 9838472  T
Q  155 tttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    |||||||||||||  ||||||||||||||||| ||||||  || |||  ||||||||||||||||| ||||||||||||||||||||||||    
T  9838471 tttatatcgtcaaactaaaataagtaacgcgagttgtttcaacaaaatgacaatccatgtggatacaatactctacttatcactttattac 9838381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 12 - 245
Target Start/End: Complemental strand, 8241530 - 8241302
Alignment:
Q  12 atgaatgttatttaattccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgctctgttg 111  Q
    |||||||||||||||||||||| ||||||||||||| |||||||| |||| ||||   ||||||||||||| |||||||| ||| ||||||||| |||||    
T  8241530 atgaatgttatttaattccaacaaaataaatagggg-gattcaaaaagtc-taactgctgcttacttttctacaaccaaa-caggtaacttgctatgttg 8241434  T
Q  112 caaacagataaaatttgcaatctttaacccttaactcttttattttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaatcca 211  Q
    ||||||||||||| ||||||||| |||| |||||||||||||||||||||||| ||  |||||||||||| | ||||||||||||| ||||  ||| ||     
T  8241433 caaacagataaaaattgcaatctctaactcttaactcttttattttatatcgtgaaactaaaataagtaatgtgaattgtttggacaaaac-gcaa-cct 8241336  T
Q  212 tgtggatacgatactctacttatcactttattac 245  Q
    ||||||||||||||||||||||||||||| ||||    
T  8241335 tgtggatacgatactctacttatcactttcttac 8241302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 12 - 245
Target Start/End: Complemental strand, 21907693 - 21907457
Alignment:
Q  12 atgaatgttatttaat-tccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagc-agataacttgctctgt 109  Q
    |||||||||||||||| |||||| || |||||| ||| ||||||||||||| |||||  || || ||||| ||||||||||   || |||||||||||||    
T  21907693 atgaatgttatttaatatccaacaaagtaaataaggg-gattcaaagagtcgtaaccgctgtttccttttttgcaaccaaaaatagctaacttgctctgt 21907595  T
Q  110 tgcaaacagataaaattt--gcaatctttaacccttaactcttttattttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaa 207  Q
    ||||||||||||||| ||  | ||| | ||||||||| ||||||||||||||||| |||||||||| |||||||||||| || ||||||| |||| ||||    
T  21907594 tgcaaacagataaaaattatgtaatttctaacccttatctcttttattttatatcatcaacttaaattaagtaacgcgacttttttggacgaaacgacaa 21907495  T
Q  208 tccatgtggatacgatactctacttatcactttattac 245  Q
    ||| ||||||||||||||| ||||||||||||||||||    
T  21907494 tccttgtggatacgatactttacttatcactttattac 21907457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 73 - 244
Target Start/End: Complemental strand, 4339932 - 4339761
Alignment:
Q  73 ttacttttctgcaaccaaagcagataacttgctctgttgcaaacagataaaatttgcaatctttaacccttaactcttttattttatatcgtcaacttaa 172  Q
    ||||||||||||||||||| ||| |||||||||  |||||||||| |||||  ||| ||||| ||||||||| ||||||||||||||||||||||  |||    
T  4339932 ttacttttctgcaaccaaaacaggtaacttgcttagttgcaaacaaataaatattgtaatctctaacccttatctcttttattttatatcgtcaaactaa 4339833  T
Q  173 aataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttatta 244  Q
    ||||||||| |||||||| |||||| |||| ||||||  ||||||||| |||||||||||||||||||||||    
T  4339832 aataagtaatgcgaattggttggacaaaacgacaatcattgtggatacaatactctacttatcactttatta 4339761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 12 - 241
Target Start/End: Complemental strand, 11177210 - 11176979
Alignment:
Q  12 atgaatgttatttaat-tccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaag-cagataacttgctctgt 109  Q
    |||||||||||| ||| |||||| || ||||||| || |||| ||||||||||||||  || || ||||| || ||| |||  ||| ||||||||| |||    
T  11177210 atgaatgttattcaatatccaacaaagtaaatagaggggatttaaagagtcctaaccgctgtttccttttatgtaacaaaaaacaggtaacttgctatgt 11177111  T
Q  110 tgcaaacagataaaatttgcaatctttaacccttaactcttttattttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaatc 209  Q
    |||||||  |||||| ||||||| | ||||||||| |||||||||||||||||||||| |||||||||||||| |||||| ||| ||  |||| |||| |    
T  11177110 tgcaaacttataaaaattgcaatttctaacccttatctcttttattttatatcgtcaatttaaaataagtaacacgaattatttcgaagaaacgacaacc 11177011  T
Q  210 catgtggatacgatactctacttatcacttta 241  Q
    ||||||||||||||||||||||||||||||||    
T  11177010 catgtggatacgatactctacttatcacttta 11176979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 35 - 245
Target Start/End: Original strand, 23645631 - 23645841
Alignment:
Q  35 aaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgctctgttgcaaacagataaaatttgcaatct 134  Q
    |||||||||| |  ||||||||||  |||||||| ||||||||||| |||||||||| ||  ||||||||||||||||||||| |||||| |||||||||    
T  23645631 aaataaatagagcggattcaaagaagcctaaccactgcttacttttatgcaaccaaaacatgtaacttgctctgttgcaaacaaataaaaattgcaatct 23645730  T
Q  135 ttaacccttaactcttttattttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttat 234  Q
     ||||||| |||||||||||||||| |  |      ||||||| |||||  |||||||||||| |||| ||||||| | |||||||||||||||||||||    
T  23645731 ctaaccctcaactcttttattttattttattgttcaaaaataattaacgataattgtttggacgaaacgacaatccctatggatacgatactctacttat 23645830  T
Q  235 cactttattac 245  Q
    |||||||||||    
T  23645831 cactttattac 23645841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 49 - 245
Target Start/End: Original strand, 27737566 - 27737763
Alignment:
Q  49 gattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataa-cttgctctgttgcaaacagataaaatttgcaa-tctttaacccttaac 146  Q
    ||||| |||| ||||||||  ||||||||||| |||||| ||| ||| ||| ||||||||||||||||||||||||| |||||| ||| |||||||||      
T  27737566 gattcgaagaatcctaaccgctgcttacttttttgcaacaaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaactctctaaccctta-- 27737663  T
Q  147 tcttttattttatatcgtcaactta---aaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttatt 243  Q
    ||||| |||||||  ||||||||||   |||||||||||||||||||||||||| |||||||||||| ||||| || |||||||||||||||||||||||    
T  27737664 tctttcattttat--cgtcaacttacaaaaataagtaacgcgaattgtttggacgaaacaacaatccttgtgggtatgatactctacttatcactttatt 27737761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 55 - 245
Target Start/End: Complemental strand, 15466584 - 15466395
Alignment:
Q  55 aagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgctctgttgcaaacagataaaatttgcaatctttaacccttaactcttttat 154  Q
    |||||| ||||||  || |||||||||||||||||||  || |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  15466584 aagagttctaaccgctgtttacttttctgcaaccaaat-aggtaacttgctctgttgcaaacagataaaatttgcaatctctaacccttaactcttttat 15466486  T
Q  155 t-ttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    | ||||||||| ||   ||||||| ||||||||||||||| ||| |||  ||||||| | | ||||||||||||||| || |||||||||||    
T  15466485 tattatatcgttaaaacaaaataactaacgcgaattgtttagacgaaatgacaatccctattgatacgatactctacgta-cactttattac 15466395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 35 - 245
Target Start/End: Original strand, 21672298 - 21672509
Alignment:
Q  35 aaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgctctgttgcaaacagataaaatttgcaa-tc 133  Q
    ||||||||||||| |||| ||| | ||||||||    ||||||||| |||||| ||| ||| |||||||||| |||||||| |||||||| |||||| ||    
T  21672298 aaataaataggggggattgaaatattcctaaccgccacttacttttatgcaacgaaaacaggtaacttgctcagttgcaaatagataaaaattgcaaatc 21672397  T
Q  134 tttaaccctt-aactctt-ttattttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctact 231  Q
    | ||| |||| ||||||| |||||||||  |||||||| |||| ||||||| |||||||||||||| |||  | ||||||||||||||||||||||||||    
T  21672398 tctaatcctttaactcttattattttat--cgtcaactaaaaaaaagtaacacgaattgtttggacgaaaagataatccatgtggatacgatactctact 21672495  T
Q  232 tatcactttattac 245  Q
    ||||||||||||||    
T  21672496 tatcactttattac 21672509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 35 - 245
Target Start/End: Original strand, 21679714 - 21679925
Alignment:
Q  35 aaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgctctgttgcaaacagataaaatttgcaa-tc 133  Q
    ||||||||||||| |||| ||| | ||||||||    ||||||||| |||||| ||| ||| |||||||||| |||||||| |||||||| |||||| ||    
T  21679714 aaataaataggggggattgaaatattcctaaccgccacttacttttatgcaacgaaaacaggtaacttgctcagttgcaaatagataaaaattgcaaatc 21679813  T
Q  134 tttaaccctt-aactctt-ttattttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctact 231  Q
    | ||| |||| ||||||| |||||||||  |||||||| |||| ||||||| |||||||||||||| |||  | ||||||||||||||||||||||||||    
T  21679814 tctaatcctttaactcttattattttat--cgtcaactaaaaaaaagtaacacgaattgtttggacgaaaagataatccatgtggatacgatactctact 21679911  T
Q  232 tatcactttattac 245  Q
    ||||||||||||||    
T  21679912 tatcactttattac 21679925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 50 - 245
Target Start/End: Original strand, 25927184 - 25927377
Alignment:
Q  50 attcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgctctgttgcaaacagataaaatttgcaatct-ttaacccttaactc 148  Q
    ||||||||| ||||||||  | || || ||| || ||||||| ||| ||||||||||| |||||||||||||||| ||||||||| |||||||| |||||    
T  25927184 attcaaagaatcctaaccgctactaacatttatgaaaccaaaacaggtaacttgctctattgcaaacagataaaaattgcaatctcttaaccctaaactc 25927283  T
Q  149 ttttatt-ttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    ||||||| || ||| ||    ||| ||||||||||| ||||||||||||| |||| | ||||||||||||||||||| ||||||||||||||||||||    
T  25927284 ttttattattttattgt----ttagaataagtaacgtgaattgtttggacgaaactaaaatccatgtggatacgatattctacttatcactttattac 25927377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 12 - 234
Target Start/End: Original strand, 6630531 - 6630755
Alignment:
Q  12 atgaatgttatttaat-tccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaag-cagataacttgctctgt 109  Q
    |||||||||||||| | |||||| | |||||||||||  ||||||||||||||||||  |  || | ||| ||||||||||  ||| |||||||||||||    
T  6630531 atgaatgttatttattatccaacaatataaataggggt-attcaaagagtcctaaccgctatttccatttttgcaaccaaaaacaggtaacttgctctgt 6630629  T
Q  110 tgcaaacaga-taaaatttgcaatctttaacccttaactcttttattttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaat 208  Q
    |||||| | | ||||| ||||||||| ||||| |||  ||||||||||||||| |||||||||||||||||||||| |   |||| ||| |||| |||||    
T  6630630 tgcaaaaaaaataaaaattgcaatctctaacctttatatcttttattttatattgtcaacttaaaataagtaacgcaagcggtttagacgaaacgacaat 6630729  T
Q  209 ccatgtggatacgatactctacttat 234  Q
    | |||||||| |||||||||||||||    
T  6630730 ctatgtggatccgatactctacttat 6630755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 98 - 245
Target Start/End: Original strand, 22410256 - 22410401
Alignment:
Q  98 aacttgctctgttgcaaacagataaaatttgcaatctt-taacccttaactcttttattttatatcgtcaacttaaaa-taagtaacgcgaattgtttgg 195  Q
    ||||||||||||||||||||||||||| ||||||  || |||||||||  |||||||||  ||||||||||||||||| ||||||||| ||||||||||     
T  22410256 aacttgctctgttgcaaacagataaaaattgcaagattctaaccctta--tcttttatt--atatcgtcaacttaaaaataagtaacgtgaattgtttga 22410351  T
Q  196 accaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    |  |||| ||||||| ||||||||||||||||||||||||| ||||||||    
T  22410352 atgaaacgacaatccctgtggatacgatactctacttatcattttattac 22410401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 154 - 245
Target Start/End: Complemental strand, 9516904 - 9516810
Alignment:
Q  154 ttttatatcgtcaactta---aaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    ||||||||||||||||||   ||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  9516904 ttttatatcgtcaacttacaaaaataagtaacgcgagttgtttggacgaaacgacaatccatgtggatacgatactctacttatcactttattac 9516810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 97 - 245
Target Start/End: Original strand, 21688721 - 21688869
Alignment:
Q  97 taacttgctctgttgcaaacagataaaatttgcaatctttaacccttaactcttttattttatatcgtcaacttaaaataagtaacgcgaattgtttgga 196  Q
    |||||| |||| || |||||| |||||| | ||||||| |||||  |||||||||||||||||||| |||||| ||||||||||||||||||| ||||||    
T  21688721 taacttcctctattacaaacatataaaaatcgcaatctctaacctctaactcttttattttatatcttcaactcaaaataagtaacgcgaattttttgga 21688820  T
Q  197 ccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
       ||| ||||||| | ||||||| |||||||||||||||||| |||||    
T  21688821 tgtaacgacaatccctatggatacaatactctacttatcacttgattac 21688869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 13 - 245
Target Start/End: Complemental strand, 19244833 - 19244610
Alignment:
Q  13 tgaatgttatttaat-tccaacgaaataaataggggag-attcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgctctgtt 110  Q
    ||||||||||||||| |  ||||||| ||||| ||| | ||||||||| |||| |||| | ||||||||||| |||||||| ||| ||||||||||||||    
T  19244833 tgaatgttatttaatatttaacgaaacaaatatgggggcattcaaagaatccttaccactacttacttttctacaaccaaaccaggtaacttgctctgtt 19244734  T
Q  111 gcaaacagat-aaaatttgcaatctttaacccttaactcttttattttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaatc 209  Q
    |||||||| | ||||  |||||||| ||||||| | ||||||||||||||||| ||||||||||||            |||||||||| |||| ||||||    
T  19244733 gcaaacagttcaaaaagtgcaatctctaaccctcatctcttttattttatatcatcaacttaaaat------------ttgtttggacgaaacgacaatc 19244646  T
Q  210 catgtggatacgatactctacttatcactttattac 245  Q
      | | ||| ||||||||||||||||||||||||||    
T  19244645 tctatagattcgatactctacttatcactttattac 19244610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 12 - 232
Target Start/End: Original strand, 9898803 - 9899019
Alignment:
Q  12 atgaatgttatttaattccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgctctgttg 111  Q
    ||||||||||||||| |||||| ||||||| |||||  |||| || |||  |||||  || |||||||||||||||||||  || ||||||| ||| |||    
T  9898803 atgaatgttatttaactccaacaaaataaacagggggaattcgaacagttgtaaccgctg-ttacttttctgcaaccaaaataggtaacttgttct-ttg 9898900  T
Q  112 caaacagataaaatttgcaatctttaacccttaactcttttatt-ttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaatcc 210  Q
    ||||||||||||| |||||||||  |||  |||| ||||||||| ||||||| ||||   ||||||||||||| |||| ||||| || ||||||||||||    
T  9898901 caaacagataaaaattgcaatct--aacatttaattcttttattattatatcatcaaac-aaaataagtaacgtgaatggtttgaacgaaacaacaatcc 9898997  T
Q  211 atgtggatacgatactctactt 232  Q
      |||||||| |||||||||||    
T  9898998 ccgtggatacaatactctactt 9899019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 172 - 245
Target Start/End: Complemental strand, 9726120 - 9726047
Alignment:
Q  172 aaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    ||||||||||||| |||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  9726120 aaataagtaacgcaaattgtttggacgaaacgacaatccatgtggatacgatactctacttatcactttattac 9726047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 98 - 244
Target Start/End: Complemental strand, 23143893 - 23143748
Alignment:
Q  98 aacttgctctgttgcaaacagataaaatttgcaa-tctttaacccttaactcttttattttatatcgtcaactta--aaataagtaacgcgaattgtttg 194  Q
    |||||| ||||||| |||||||||||| ||| || ||| ||||| |||  |||||||||  ||||||||||||||  |||||||||||  ||||||||||    
T  23143893 aacttgatctgttgtaaacagataaaaattgaaactctctaaccttta--tcttttatt--atatcgtcaacttacaaaataagtaacatgaattgtttg 23143798  T
Q  195 gaccaaacaacaatccatgtggatacgatactctacttatcactttatta 244  Q
    ||| |||| ||||||| |||||||| ||||||||||||||||||||||||    
T  23143797 gacgaaacgacaatccctgtggatatgatactctacttatcactttatta 23143748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 50 - 245
Target Start/End: Original strand, 17826974 - 17827166
Alignment:
Q  50 attcaaagagtcctaaccattgcttacttttctgcaaccaaag-cagataacttgctctgttgcaaacagataaaatttgcaa-tctttaacccttaact 147  Q
    ||||||||| | |||||| |||||||||||||||||||||||  ||  |||  |||| ||||||||||| |||||| |||||| |||||      ||||     
T  17826974 attcaaagaattctaaccgttgcttacttttctgcaaccaaaaacaagtaaactgctatgttgcaaacatataaaaattgcaactcttt------taacc 17827067  T
Q  148 cttttattttatatcgtcaacttaaaa-taagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    ||| | |||||||| |||||   |||| ||||||||||||||||||||||  |||| |||||||||||||||||||||||||| |||| ||||||||||    
T  17827068 cttatcttttatattgtcaaaaaaaaaataagtaacgcgaattgtttggaagaaacgacaatccatgtggatacgatactctatttataactttattac 17827166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 60 - 245
Target Start/End: Original strand, 23844353 - 23844539
Alignment:
Q  60 tcctaaccattgcttacttttctgcaaccaaagcagataa-cttgctctgttgcaaacagataaaatttgcaatctttaacccttaactcttttat--tt 156  Q
    ||||||||  ||||||||||| |||||||||| ||| ||| |||| ||| |||||||||||||||| ||||||  |||      |||| |||||||  ||    
T  23844353 tcctaaccgctgcttacttttatgcaaccaaaacaggtaaacttggtctattgcaaacagataaaaattgcaacatttc-----taacccttttatcttt 23844447  T
Q  157 tatatcgtcaactta---aaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    |||||||||||||||   ||||||||||||||| |||||||||| |||| ||||||| | | |||| |||||||||||||||| ||||||||    
T  23844448 tatatcgtcaacttacaaaaataagtaacgcgagttgtttggacgaaacgacaatccctttagatatgatactctacttatcattttattac 23844539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 72 - 229
Target Start/End: Original strand, 24252131 - 24252287
Alignment:
Q  72 cttacttttctgcaaccaaagcagataacttgctctgttgcaaacagataaaatttgcaatctttaacccttaactcttttattt--tatatcgtcaact 169  Q
    ||||| |||||||||||||| ||   ||||||||||||||||||||||||||| || |||| | ||||||| | |||||||||||  | ||| ||  |      
T  24252131 cttacatttctgcaaccaaaacacgaaacttgctctgttgcaaacagataaaaattacaatatctaaccctcatctcttttatttattttattgttca-- 24252228  T
Q  170 taaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactcta 229  Q
     ||||||||||||  ||||||||||||| |||| ||||||||||||||||||||||||||    
T  24252229 -aaaataagtaacaagaattgtttggactaaacgacaatccatgtggatacgatactcta 24252287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 49 - 245
Target Start/End: Original strand, 27124372 - 27124566
Alignment:
Q  49 gattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataa-cttgctctgttgcaaacagataaaatttgcaa-tctttaacccttaac 146  Q
    |||||||||| || |||||  |||||||||||||||||||||  ||| ||| |||||||||||||||||| |||||| ||| || |||||      ||||    
T  27124372 gattcaaagaatcttaaccgctgcttacttttctgcaaccaagacaggtaaacttgctctgttgcaaacatataaaaattggaagtcttt------taac 27124465  T
Q  147 tcttttattttatatcgtcaactt--aaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttatta 244  Q
     ||| | |||||||||||||| ||  ||||||||||||| ||||||||||  | |||| ||||||||||| ||||||||| | || ||||||||||||||    
T  27124466 ccttatgttttatatcgtcaagttcaaaaataagtaacgagaattgtttgctcgaaacgacaatccatgtcgatacgataatataattatcactttatta 27124565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 35 - 245
Target Start/End: Original strand, 22566025 - 22566236
Alignment:
Q  35 aaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagc-agataacttgctctgttgcaaacagataaaatttgcaatc 133  Q
    |||| ||||| ||||||||||| | ||||||||  ||||||||||||| ||| ||||   || |||||||   |||||||||||||||||| ||||||||    
T  22566025 aaatgaatagaggagattcaaaaaatcctaaccgctgcttacttttctacaatcaaaaataggtaacttgtagtgttgcaaacagataaaaattgcaatc 22566124  T
Q  134 t-ttaacccttaactcttttattt-tatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctact 231  Q
    | ||| | || |||||||| |||| ||| | || |||   ||||||||||||||||||| || ||| || | ||||| | |||||||| |||||||||||    
T  22566125 tattatctctcaactctttaatttatattttgttaacc--aaataagtaacgcgaattgcttagacgaagcgacaattcttgtggatatgatactctact 22566222  T
Q  232 tatcactttattac 245  Q
    ||||||||||||||    
T  22566223 tatcactttattac 22566236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 60 - 209
Target Start/End: Original strand, 8039025 - 8039177
Alignment:
Q  60 tcctaaccattgcttacttttctgcaaccaaagcagataacttgctctgttgcaaacagataaaatttgcaatctttaacccttaactcttttatt---- 155  Q
    ||||||||| | ||||||||||| ||||||||  || ||||| | ||  ||||||||| |||||| ||||||||| ||||||||||||||||||||        
T  8039025 tcctaaccactacttacttttctacaaccaaaataggtaactcgttcgattgcaaacatataaaaattgcaatctctaacccttaactcttttattatta 8039124  T
Q  156 ttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaatc 209  Q
    ||||||||||||   |||||||||||| |||||||||||||  |||| ||||||    
T  8039125 ttatatcgtcaa-acaaaataagtaacacgaattgtttggatgaaacgacaatc 8039177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 142 - 245
Target Start/End: Original strand, 18075360 - 18075462
Alignment:
Q  142 ttaactcttttattttatatcgtcaacttaaaataagtaa-cgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcacttt 240  Q
    ||||||||||||||||||   ||||||| ||||||||||| | |  ||||||||||| |||| |||||||| |||||||||||||||| |||||||||||    
T  18075360 ttaactcttttattttatt--gtcaactaaaaataagtaaactcagattgtttggacaaaacgacaatccacgtggatacgatactctgcttatcacttt 18075457  T
Q  241 attac 245  Q
    |||||    
T  18075458 attac 18075462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 178 - 245
Target Start/End: Complemental strand, 17729244 - 17729177
Alignment:
Q  178 gtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    ||||||||||| |||||||| |||| ||||||  ||||||||||||||||||||||||||||||||||    
T  17729244 gtaacgcgaatcgtttggacgaaacgacaatctttgtggatacgatactctacttatcactttattac 17729177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 245
Target Start/End: Complemental strand, 5624895 - 5624665
Alignment:
Q  17 tgttatttaat-tccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaacc-aaagcagataacttgctctgttgcaa 114  Q
    ||||||||||| |||||| | || | || ||||||||| |||| ||||||||  ||||||||||||||||||| ||||| | |||  |||||| || |||    
T  5624895 tgttatttaatgtccaacaatatgattatgggagattcgaagaatcctaaccgctgcttacttttctgcaaccaaaagccggtaaactgctctattacaa 5624796  T
Q  115 acagataaaatttgcaatctt--taacccttaactcttttattttatatcgtc-aactt---aaaataagtaacgcgaattgtttggaccaaacaacaat 208  Q
    |||||||||| |||||| |||  |||||||||||       |||| ||||||| |||||   |||||||||||||| ||||||||| || |||| |||||    
T  5624795 acagataaaaattgcaacctttctaacccttaac-------ttttctatcgtcaaacttacaaaaataagtaacgcaaattgtttgcacaaaacgacaat 5624703  T
Q  209 c-catgtggatacgatactctacttatcactttattac 245  Q
    | |   || ||| |||||||||||||||||||||||||    
T  5624702 ctctattgtataagatactctacttatcactttattac 5624665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 171 - 245
Target Start/End: Original strand, 22413049 - 22413123
Alignment:
Q  171 aaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    ||||||||||||  |||||||| |||| ||| |||||||||||| ||||||||||||||||||| ||||||||||    
T  22413049 aaaataagtaacaagaattgttcggacgaaagaacaatccatgtagatacgatactctacttataactttattac 22413123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 28 - 231
Target Start/End: Complemental strand, 24475298 - 24475095
Alignment:
Q  28 tccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagat-aacttgctctgttgcaaacagataaaatt 126  Q
    |||||| | ||||| ||||||||||| |||| ||||||||| | |||||||||||||||||||| ||| | |||||| | |||||||||||||||||  |    
T  24475298 tccaacaatataaacaggggagattcgaagaatcctaaccactacttacttttctgcaaccaaaacaggtaaacttgttttgttgcaaacagataaagat 24475199  T
Q  127 tgcaatctttaacccttaactcttt-tattttatatcgtcaactt---aaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacga 222  Q
    ||||| ||||      |||| |||| | |||| ||||||||||||   |||||||||  ||||  |||||||||| ||| |||||| | ||||||| |||    
T  24475198 tgcaaccttt-----ctaaccctttatcttttttatcgtcaacttacaaaaataagtttcgcgtgttgtttggacgaaataacaattcttgtggatgcga 24475104  T
Q  223 tactctact 231  Q
    |||| ||||    
T  24475103 tactatact 24475095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 172 - 245
Target Start/End: Original strand, 17299832 - 17299905
Alignment:
Q  172 aaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    ||||||||||||| |||||||||||| |||| |||||||   || |||||||||||||||||||||||||||||    
T  17299832 aaataagtaacgcaaattgtttggactaaacgacaatcccgatgaatacgatactctacttatcactttattac 17299905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 49 - 245
Target Start/End: Original strand, 23231862 - 23232057
Alignment:
Q  49 gattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataactt-gctctgttgcaaacagataaaatttgcaat-ctt-taacccttaa 145  Q
    ||||| |||| |||||| | ||||||||||||||  ||||||| ||  ||| || |||||||||||||||||||||||| ||||  ||| ||||| ||||    
T  23231862 gattcgaagaatcctaaacgttgcttacttttctataaccaaaacaagtaaatttgctctgttgcaaacagataaaatt-gcaagacttctaaccgttaa 23231960  T
Q  146 ctcttttattttatatcgtcaa-ctta---aaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcacttta 241  Q
    ||       ||||||||||||| ||||   |||||||||||||||||||||||||| || | ||||| | | |||||| ||||| |||||||||||||||    
T  23231961 ct-------tttatatcgtcaaacttacaaaaataagtaacgcgaattgtttggacgaaccgacaattcttatggatatgataccctacttatcacttta 23232053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 171 - 245
Target Start/End: Original strand, 24657455 - 24657529
Alignment:
Q  171 aaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    ||||||||||||  |||||||| |||| ||| |||||||| |||||||||||||||| |||||||| ||||||||    
T  24657455 aaaataagtaacaagaattgttcggacgaaaaaacaatccctgtggatacgatactcgacttatcattttattac 24657529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 173 - 245
Target Start/End: Original strand, 7542962 - 7543034
Alignment:
Q  173 aataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    ||||||||||||||||||||||||  |||| ||| ||||  | ||||||||||| ||||||||||||||||||    
T  7542962 aataagtaacgcgaattgtttggatgaaactacagtccacattgatacgatactttacttatcactttattac 7543034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 49 - 131
Target Start/End: Complemental strand, 25781999 - 25781916
Alignment:
Q  49 gattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataa-cttgctctgttgcaaacagataaaatttgcaa 131  Q
    ||||| |||| ||||||| | || |||||||||||||||||||  || ||| ||||||||||||||||||||||||| ||||||    
T  25781999 gattcgaagaatcctaactactgtttacttttctgcaaccaaaataggtaaacttgctctgttgcaaacagataaaaattgcaa 25781916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 36 - 124
Target Start/End: Original strand, 24657333 - 24657422
Alignment:
Q  36 aataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataactt-gctctgttgcaaacagataaaa 124  Q
    |||| |||| || ||||| |||| | ||||||  |||||||||||||||||||||| ||| ||| || ||||||||||||||||||||||    
T  24657333 aatatatagaggggattcgaagaattctaaccgctgcttacttttctgcaaccaaaacaggtaaattcgctctgttgcaaacagataaaa 24657422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 46 - 122
Target Start/End: Complemental strand, 1635186 - 1635110
Alignment:
Q  46 ggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgctctgttgcaaacagataa 122  Q
    |||||||| |||| ||||||||  || |||||||||| |||||||| ||  ||||||||| ||||||||||||||||    
T  1635186 ggagattcgaagaatcctaaccgctgtttacttttctacaaccaaaacatgtaacttgctttgttgcaaacagataa 1635110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 124
Target Start/End: Complemental strand, 17382269 - 17382214
Alignment:
Q  70 tgcttacttttctgcaaccaaagcagataa-cttgctctgttgcaaacagataaaa 124  Q
    |||||||||||||||||||||| ||  ||| |||||||||||||||||||||||||    
T  17382269 tgcttacttttctgcaaccaaaacatgtaaacttgctctgttgcaaacagataaaa 17382214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 24215732 - 24215615
Alignment:
Q  12 atgaatgttatttaattccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgctctgttg 111  Q
    |||||||||||||||||| ||| |||| |||||||| |||||||||| |||||||    ||| || ||| ||||||||||  || ||||||| ||||||     
T  24215732 atgaatgttatttaattcaaac-aaatgaatagggg-gattcaaagaatcctaactgccgctaacatttttgcaaccaaaataggtaacttgttctgttt 24215635  T
Q  112 caaacagataaaatttgcaa 131  Q
    |||||| |||||| ||||||    
T  24215634 caaacaaataaaaattgcaa 24215615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 191 - 245
Target Start/End: Original strand, 20005899 - 20005953
Alignment:
Q  191 tttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    ||||||| |||| | ||||||||| ||||||||||||| ||||||||||||||||    
T  20005899 tttggacgaaacgaaaatccatgtagatacgatactctgcttatcactttattac 20005953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 175 - 245
Target Start/End: Complemental strand, 24251611 - 24251541
Alignment:
Q  175 taagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    ||||||||||||||||||||||| | || |||| || ||||||| |||| |||| ||||| ||||||||||    
T  24251611 taagtaacgcgaattgtttggacaagacgacaaaccctgtggatgcgatcctctgcttatgactttattac 24251541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 197
Target Start/End: Original strand, 14079297 - 14079483
Alignment:
Q  12 atgaatgttatttaat-tccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaacc--aaagcagataacttgctctg 108  Q
    |||| ||||||||||| |||||| | |||||||||||  |||| |||| | ||||||  |||||||||||||| ||||  |||   || ||||| || ||    
T  14079297 atgactgttatttaatatccaacaatataaatagggggaattcgaagaattctaaccgctgcttacttttctgtaaccaaaaataggaaaacttcctttg 14079396  T
Q  109 ttgcaaacagataaaatttgcaa-tctttaacccttaactcttttattttatatcgtcaactt-aaaataagtaacgcgaattgtttggac 197  Q
    |||||||||||||||| |||||| ||| || ||||||  | |||||    ||||||||||||| ||||||||||||||| ||| |||||||    
T  14079397 ttgcaaacagataaaaattgcaactctctagccctta--tatttta--gcatatcgtcaacttaaaaataagtaacgcggattttttggac 14079483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 245
Target Start/End: Original strand, 28586031 - 28586104
Alignment:
Q  172 aaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    |||||||||||| | ||||||| |   |||| ||||||||||| |||| |||||||||||||||| ||||||||    
T  28586031 aaataagtaacgtggattgttttgttgaaacgacaatccatgtcgatatgatactctacttatcaatttattac 28586104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 202
Target Start/End: Original strand, 20002255 - 20002421
Alignment:
Q  38 taaataggggagattcaaagagtcct--aaccattgcttacttttctgcaaccaaag-cagataacttgctctgttgcaaacagataaaatttgcaa-tc 133  Q
    |||||||||| |||||||||| ||||  ||||| || |||| |||||||| | |||  ||| |||||||||| |||| ||||| |||||  |||||| ||    
T  20002255 taaataggggtgattcaaagaatcctctaaccactg-ttacatttctgcaccaaaaaacaggtaacttgctcggttggaaacaaataaatattgcaaatc 20002353  T
Q  134 t-ttaacccttaactcttttattttatatcgtcaa-cttaaaataagtaacgcgaattgtttggaccaaac 202  Q
    | |||||||||| || |||||||||||  |||||| |||||||||||||||||| ||| ||||||| ||||    
T  20002354 tcttaacccttatct-ttttattttat--cgtcaaacttaaaataagtaacgcggattatttggacaaaac 20002421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 130
Target Start/End: Original strand, 22813621 - 22813680
Alignment:
Q  72 cttacttttctgcaaccaaagcagataa-cttgctctgttgcaaacagataaaatttgca 130  Q
    |||||||||||||||||||| ||| ||| |||||| ||||||||||| |||||| |||||    
T  22813621 cttacttttctgcaaccaaaacaggtaaacttgctttgttgcaaacaaataaaaattgca 22813680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 245
Target Start/End: Original strand, 21841688 - 21841762
Alignment:
Q  171 aaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    ||||||||||||  ||| |||| |||| |||  ||||||||||||||| | | |||||||||||| |||||||||    
T  21841688 aaaataagtaacaagaaatgttcggacgaaaggacaatccatgtggattcaaaactctacttatctctttattac 21841762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 241
Target Start/End: Original strand, 23009395 - 23009464
Alignment:
Q  171 aaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcacttta 241  Q
    ||||||||||||  ||||| ||||||  |||  ||||||| |||||||||||| |||||||||||||||||    
T  23009395 aaaataagtaacaagaatt-tttggaagaaaggacaatccctgtggatacgatgctctacttatcacttta 23009464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 241
Target Start/End: Complemental strand, 23778969 - 23778900
Alignment:
Q  171 aaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcacttta 241  Q
    ||||||||||||  ||||| ||||||  |||  ||||||| |||||||||||| |||||||||||||||||    
T  23778969 aaaataagtaacaagaatt-tttggaagaaaggacaatccctgtggatacgatgctctacttatcacttta 23778900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 99
Target Start/End: Original strand, 18075289 - 18075338
Alignment:
Q  50 attcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataa 99  Q
    ||||||||| || |||||  |||||||||||||||||||||| |||||||    
T  18075289 attcaaagaatcttaaccgctgcttacttttctgcaaccaaaacagataa 18075338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 243
Target Start/End: Complemental strand, 17382216 - 17382172
Alignment:
Q  199 aaacaacaatccatgtggatacgatactctacttatcactttatt 243  Q
    |||| ||||||| ||| |||||||||||||||| |||||||||||    
T  17382216 aaacgacaatccctgtagatacgatactctactcatcactttatt 17382172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 115; Significance: 2e-58; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 12 - 245
Target Start/End: Complemental strand, 24281532 - 24281302
Alignment:
Q  12 atgaatgttatttaattccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgctctgttg 111  Q
    |||||||||||||||||||||| |||||||||||||   ||||||| ||||||||   ||| ||||||||| |||||||| ||  |||||| |||||||     
T  24281532 atgaatgttatttaattccaacaaaataaataggggg--ttcaaagtgtcctaactgctgcatacttttctacaaccaaa-catgtaactttctctgttt 24281436  T
Q  112 caaacagataaaatttgcaatctttaacccttaactcttttattttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaatcca 211  Q
    |||||||||| || ||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||| ||||||| |||  |||| | ||||||    
T  24281435 caaacagatagaaattgcaatctctaaccctttactcttttattttatattgtcaacttaaaataagtaacgcaaattgttcggaaaaaacgataatcca 24281336  T
Q  212 tgtggatacgatactctacttatcactttattac 245  Q
    |||||||| |||| ||||||||||||||||||||    
T  24281335 tgtggatatgataatctacttatcactttattac 24281302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 15 - 245
Target Start/End: Complemental strand, 22664463 - 22664231
Alignment:
Q  15 aatgttatttaat-tccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgctctgttgca 113  Q
    ||||||||||||| |||||  ||||||||| ||  |||||||||||||||||||  | |||||||||||||||||||| ||  |||||||||||||| ||    
T  22664463 aatgttatttaatatccaataaaataaatacggaggattcaaagagtcctaaccgctacttacttttctgcaaccaaaacatgtaacttgctctgttaca 22664364  T
Q  114 aacagataaaatttgcaatctt-taacccttaactcttttattttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaatccat 212  Q
    |||| |||||| ||||||| |  ||||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||| ||| |||  | |||||      
T  22664363 aacaaataaaaattgcaatttactaacccttatctcttttattttatatcgtcaacttaaaataagcaacgcgagttgtttagacgaaatgaaaatccca 22664264  T
Q  213 gtggatacgatactctacttatcactttattac 245  Q
    ||||||| |||||||||||||||||||||||||    
T  22664263 gtggataagatactctacttatcactttattac 22664231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 35 - 191
Target Start/End: Complemental strand, 28008340 - 28008184
Alignment:
Q  35 aaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgctctgttgcaaacagataaaatttgcaatct 134  Q
    |||||||||||||||||||||||| ||||||||  |||||||||||||||||||||| ||  ||| ||||||| ||| |||||||||||| |||||||||    
T  28008340 aaataaataggggagattcaaagaatcctaaccgctgcttacttttctgcaaccaaaacaagtaatttgctctattggaaacagataaaaattgcaatct 28008241  T
Q  135 ttaacccttaactcttttattttatatcgtcaacttaaaataagtaacgcgaattgt 191  Q
     ||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||    
T  28008240 ctaatcctttactcttttattttatatcgtcaacttaaaataagtaacacgaattgt 28008184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 12 - 245
Target Start/End: Complemental strand, 33190934 - 33190702
Alignment:
Q  12 atgaatgttatttaattccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgctctgttg 111  Q
    |||||||||||| || |  ||| |||||||||| || ||| |||||| ||||||||  ||||||||||||||||| |||| ||| |||||||| ||||||    
T  33190934 atgaatgttattgaaattaaacaaaataaatagagg-gatccaaagaatcctaaccgctgcttacttttctgcaatcaaaccaggtaacttgcactgttg 33190836  T
Q  112 caaacagataaaatttgcaatctttaacccttaactcttttattttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaatcca 211  Q
    |||||| |||||| || |||||| ||| |||||||| |||||||||||||||||||||||||||||||||| ||| |||||| ||  |||| |||||       
T  33190835 caaacaaataaaaattacaatctctaaaccttaactattttattttatatcgtcaacttaaaataagtaacacgagttgtttagatgaaacgacaattgt 33190736  T
Q  212 tgtggatacgatactctacttatcactttattac 245  Q
    ||||||||  ||||||||||||||| ||||||||    
T  33190735 tgtggatattatactctacttatcattttattac 33190702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 17 - 245
Target Start/End: Complemental strand, 24214791 - 24214569
Alignment:
Q  17 tgttatttaat-tccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgctctgttgcaaa 115  Q
    ||||||||||| |||||| ||||||||||||| |||||||||||||||||||  | |||| ||||||||||||||| ||| |||||||  ||      ||    
T  24214791 tgttatttaatatccaacaaaataaatagggg-gattcaaagagtcctaaccgctacttatttttctgcaaccaaaccaggtaacttggcct------aa 24214699  T
Q  116 cagataaaatttgcaatctttaacccttaactcttttattttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaatccatgtg 215  Q
    ||||||||| || |||| |  ||||||||| ||||||||||||||||||| |||||||||||||||||  | |||||| ||| |||||||||||||||||    
T  24214698 cagataaaaattccaatttcaaacccttaattcttttattttatatcgtccacttaaaataagtaacgtaagttgtttagacgaaacaacaatccatgtg 24214599  T
Q  216 gatacgatactctacttatcactttattac 245  Q
    |||||  |||| ||||||||||||||||||    
T  24214598 gatacagtactgtacttatcactttattac 24214569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 17 - 245
Target Start/End: Original strand, 13345182 - 13345410
Alignment:
Q  17 tgttatttaat-tccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgctctgttgcaaa 115  Q
    ||||||||||| |||||| | ||||||||||| ||||| || | ||||||||  || ||||||||||  ||||||| ||| ||||| ||| ||||  |||    
T  13345182 tgttatttaatatccaacaatataaataggggggattcgaaaaatcctaaccgctgtttacttttcttaaaccaaaacaggtaact-gctatgttttaaa 13345280  T
Q  116 cagataaaatttgcaa-tctttaacccttaactcttttattttatatcgtcaactta-aaataagtaacgcgaattgtttggaccaaacaacaatccatg 213  Q
     ||||||||  ||||| ||||||||| ||||||||||||||||||  ||||||  || |||||||||||||||||||||||||| |||| ||||||||||    
T  13345281 tagataaaaactgcaaatctttaacctttaactcttttattttat--cgtcaaactataaataagtaacgcgaattgtttggacaaaacgacaatccatg 13345378  T
Q  214 tggatacgatactctacttatcactttattac 245  Q
    |||||| |||||||||||||||||||||||||    
T  13345379 tggatatgatactctacttatcactttattac 13345410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 7 - 180
Target Start/End: Original strand, 18100849 - 18101022
Alignment:
Q  7 gtgagatgaatgttatttaat-tccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgct 105  Q
    |||| |||| ||||||||||| |||||| ||||||||| ||| |||||||| | || |||||  |||||||||||||||||||||| ||  |||||||||    
T  18100849 gtgacatgactgttatttaatatccaacaaaataaatacggg-gattcaaataatcataaccgctgcttacttttctgcaaccaaaacatgtaacttgct 18100947  T
Q  106 ctgttgcaaacagataaaatttgcaatctttaacccttaactcttttattttatatcgtcaacttaaaataagta 180  Q
     |||||||||||||||||| ||||||| | ||||||||||||||| |||||||||||||||| ||||||||||||    
T  18100948 atgttgcaaacagataaaaattgcaatttctaacccttaactcttctattttatatcgtcaaattaaaataagta 18101022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 75 - 245
Target Start/End: Original strand, 51473780 - 51473950
Alignment:
Q  75 acttttctgcaaccaaagcagataacttgctctgttgcaaacagataaaatttgcaa-tctttaaccctt-aactcttttattttatatcgtcaacttaa 172  Q
    |||||||||||||||||  |||||||||| | |||||||||||||||||| |||||| ||| ||||| || ||||||||||||||||   ||| ||| ||    
T  51473780 acttttctgcaaccaaaatagataacttgatatgttgcaaacagataaaaattgcaaatctctaaccttttaactcttttattttatt--gtcgactaaa 51473877  T
Q  173 aataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    || ||||||||| |||||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||    
T  51473878 aacaagtaacgcaaattgtttggacaaaacgacaatccatatggatacgatactctacttatcactttattac 51473950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 12 - 193
Target Start/End: Original strand, 15807861 - 15808042
Alignment:
Q  12 atgaatgttatttaat-tccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgctctgtt 110  Q
    |||||| ||||||||| ||||||||| ||||||| || |||||||||| |||||| |  |||||| |||||| |||||||| | | ||||||||||||||    
T  15807861 atgaatattatttaatatccaacgaa-taaatagtggggattcaaagaatcctaatcgctgcttatttttctacaaccaaaactggtaacttgctctgtt 15807959  T
Q  111 gcaaacagataaaatttgcaatctttaacccttaactcttttattttatatcgtcaacttaaaataagtaacgcgaattgttt 193  Q
    ||||||| |||||| |||||||| |||||| ||||||||||||||||||||| ||||  |||||||||||| |||| ||||||    
T  15807960 gcaaacaaataaaaattgcaatccttaaccattaactcttttattttatatcttcaaactaaaataagtaatgcgagttgttt 15808042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 49 - 245
Target Start/End: Original strand, 9787756 - 9787953
Alignment:
Q  49 gattcaaagagtcctaaccattgcttacttttctgcaaccaaag-cagataacttgctctgttgcaaacagataaaatttgcaatctttaacccttaact 147  Q
    |||||||||||| ||||||    ||||||||||||||||||||  ||| | |||||||||||||||||||| | ||| ||||||||| ||||||||  ||    
T  9787756 gattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggtcacttgctctgttgcaaacagttcaaaattgcaatctctaacccttttct 9787855  T
Q  148 cttttattttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    ||| ||||||||||| | ||||||||||||||||   || |||||| ||| |||| |||||  || ||||||||||||||||||||||||||||||||    
T  9787856 cttctattttatatcataaacttaaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctacttatcactttattac 9787953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 37 - 245
Target Start/End: Complemental strand, 12208835 - 12208626
Alignment:
Q  37 ataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataa-cttgctctgttgcaaacagataaaatttgcaatctt 135  Q
    ||||||||||| ||||| |||| ||||||||  |||||||||||||||| | ||| ||| ||| ||||||||||||||||||||| |||  || || |||    
T  12208835 ataaataggggggattcgaagaatcctaaccgctgcttacttttctgcagctaaaacaggtaaacttgctctgttgcaaacagattaaaactgaaacctt 12208736  T
Q  136 taacccttaactcttttat--tttatatcgtcaactta---aaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctac 230  Q
    |      |||| |||||||  |||||||||||||||||   |||||||||||||||||||||||||| |||| |||||||||||||||| |||| |||||    
T  12208735 tc-----taacccttttatcttttatatcgtcaacttacaaaaataagtaacgcgaattgtttggacgaaacgacaatccatgtggatatgatattctac 12208641  T
Q  231 ttatcactttattac 245  Q
    |||||||||||||||    
T  12208640 ttatcactttattac 12208626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 49 - 245
Target Start/End: Original strand, 21666486 - 21666682
Alignment:
Q  49 gattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataa-cttgctctgttgcaaacagataaaatttgcaa-tctttaacccttaac 146  Q
    ||||| |||| ||||||||||||||||||||||| |||||||| ||| ||| |||| | | |||||||||||||||| || | | |||||     |||||    
T  21666486 gattcgaagaatcctaaccattgcttacttttctacaaccaaaacaggtaaacttgttgtcttgcaaacagataaaaattactagtcttt-----ttaac 21666580  T
Q  147 tcttttattttatatcgtcaactta---aaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttatt 243  Q
     ||| | ||||||||||||||||||   |||||||||||| ||||||||||||| |||  ||||||||||||||||||||||||||||||||||||||||    
T  21666581 ccttatcttttatatcgtcaacttataaaaataagtaacgagaattgtttggacgaaaggacaatccatgtggatacgatactctacttatcactttatt 21666680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 98 - 245
Target Start/End: Complemental strand, 147801 - 147656
Alignment:
Q  98 aacttgctctgttgcaaacagataaaatttgcaatctttaacccttaactcttttattttatatcgtcaacttaaaataagtaacgcgaattgtttggac 197  Q
    |||||||||||||||||| |||||||||| | ||||| ||||||||| ||||||||||| |||||||||| ||||||||||||||||||  ||||| |||    
T  147801 aacttgctctgttgcaaatagataaaatt-gaaatctctaacccttatctcttttattt-atatcgtcaaattaaaataagtaacgcgagctgtttagac 147704  T
Q  198 caaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
     |||  |||||||||||| ||| ||||||| |||||||||||||||||    
T  147703 gaaatgacaatccatgtgaatatgatactccacttatcactttattac 147656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 7 - 241
Target Start/End: Original strand, 12012650 - 12012870
Alignment:
Q  7 gtgagatgaatgttatttaat-tccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgct 105  Q
    |||| |||||||||||||||| |||||| ||||||||||||| ||||| |||| |||||| | ||| |||||||| |||||||||| ||| ||||| |||    
T  12012650 gtgacatgaatgttatttaatatccaac-aaataaatagggg-gattcgaagaatcctaatcgttgtttacttttgtgcaaccaaaacaggtaactcgct 12012747  T
Q  106 ctgttgcaaacagataaaatttgcaatctttaacccttaactcttttattttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaac 205  Q
     ||||||||||| |||||| ||||||||| |||||||||||||||||||| | |||            ||||||||||||||| |||| ||  |||| ||    
T  12012748 atgttgcaaacaaataaaaattgcaatctctaacccttaactcttttattat-tat------------ataagtaacgcgaatagtttagataaaacgac 12012834  T
Q  206 aatccatgtggatacgatactctacttatcacttta 241  Q
    ||| ||||||||||| ||||||||||||||||||||    
T  12012835 aattcatgtggatacaatactctacttatcacttta 12012870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 7 - 245
Target Start/End: Original strand, 31235883 - 31236122
Alignment:
Q  7 gtgagatgaatgttatttaat-tccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagc--agataacttg 103  Q
    |||| |||| ||||||||||| |||||| | |||||||| ||  ||||||||| || ||||| |||||||||||| ||||||||||    ||  ||||||    
T  31235883 gtgacatgactgttatttaatatccaacaatataaatagagggaattcaaagaatcttaaccgttgcttacttttatgcaaccaaaaacaagtaaacttg 31235982  T
Q  104 ctctgttgcaaacagataaaatttgcaa-tctttaacccttaactcttttattttatatcgtcaacttaaaa-taagtaacgcgaattgtttggaccaaa 201  Q
    |||||||||||| |||||||| |||||| ||| |||||||||  | |||||||  ||||||||||||||||| ||||||||||||||| ||||||| |||    
T  31235983 ctctgttgcaaagagataaaaattgcaactctctaaccctta--tattttatt--atatcgtcaacttaaaaataagtaacgcgaattatttggacaaaa 31236078  T
Q  202 caacaatccatgtggatacgatactctacttatcactttattac 245  Q
    | ||||||  ||| ||||  ||||||| ||||||||||||||||    
T  31236079 cgacaatctttgtagatataatactctgcttatcactttattac 31236122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 37 - 245
Target Start/End: Original strand, 17610121 - 17610330
Alignment:
Q  37 ataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaag-cagataa-cttgctctgttgcaaacagataaaatttgcaatct 134  Q
    ||||| ||||| | |||||||| ||||||||  ||||||||||||||||||||||  ||| ||| |||||||||||||||||| |||||| || ||| ||    
T  17610121 ataaaaaggggggtttcaaagaatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgttgcaaacatataaaaattacaagct 17610220  T
Q  135 tt--aacccttaactcttttattttatatcgtcaa-ctta---aaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactct 228  Q
    ||  |||| ||||||       ||||||||||||| ||||   |||||||||||| ||||||||||||| |||| |||||||||||||||||||||||||    
T  17610221 ttctaacctttaact-------tttatatcgtcaaacttacaaaaataagtaacgtgaattgtttggacgaaacgacaatccatgtggatacgatactct 17610313  T
Q  229 acttatcactttattac 245  Q
    |||||| ||||||||||    
T  17610314 acttataactttattac 17610330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 17 - 233
Target Start/End: Complemental strand, 9401760 - 9401542
Alignment:
Q  17 tgttatttaat-tccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataa-cttgctctgttgcaa 114  Q
    ||||||||||| ||| || | |||||||| || ||||| |||| ||||||||  | ||||||||| || ||||||| ||| ||| ||| |||||||||||    
T  9401760 tgttatttaatatcctacaatataaatagaggggattcgaagaatcctaaccgctacttacttttttgtaaccaaaacaggtaaacttactctgttgcaa 9401661  T
Q  115 acagataaaatttgcaa-tctttaacccttaactcttttattttatatcgtcaactta---aaataagtaacgcgaattgtttggaccaaacaacaatcc 210  Q
    |||||||||| |||||| ||| ||||| |||  |||||||||  |||||  |||||||   |||||||||||||||||||||||||| |||| ||||| |    
T  9401660 acagataaaaattgcaactctctaaccgtta--tcttttatt--atatcaacaacttacaaaaataagtaacgcgaattgtttggacgaaacgacaattc 9401565  T
Q  211 atgtggatacgatactctactta 233  Q
    |||||||||||||||||||||||    
T  9401564 atgtggatacgatactctactta 9401542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 35 - 245
Target Start/End: Original strand, 23037874 - 23038085
Alignment:
Q  35 aaataaataggggagattcaaagagtcct--aaccattgcttacttttctgcaaccaaag-cagataacttgctctgttgcaaacagataaaatttgcaa 131  Q
    ||||||||||||| ||||| |||| ||||  ||||| || |||| ||||||||||||||  ||  ||||||||| ||||||||||||| |||| ||| ||    
T  23037874 aaataaataggggggattcgaagaatcctctaaccactg-ttacatttctgcaaccaaaaacaagtaacttgctatgttgcaaacagaaaaaaattgtaa 23037972  T
Q  132 tcttt-aacccttaactcttttattttatatcgtcaa-cttaaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactcta 229  Q
    | | | |||| ||| ||||||||||||||  | |||| |||||||||||||||| || |||||| ||| |||| |||||||||||||||||||||||| |    
T  23037973 tttctcaaccattatctcttttattttat--catcaaacttaaaataagtaacgagagttgttttgacgaaacgacaatccatgtggatacgatactc-a 23038069  T
Q  230 cttatcactttattac 245  Q
    ||||||||||||||||    
T  23038070 cttatcactttattac 23038085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 12 - 156
Target Start/End: Original strand, 17121343 - 17121486
Alignment:
Q  12 atgaatgttatttaattccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgctctgttg 111  Q
    |||||||||||||||||||||| |||||||||||  |||||| |||| ||||||||  |||||||||||||||||||||| ||  ||||||||||| |||    
T  17121343 atgaatgttatttaattccaac-aaataaatagga-agattcgaagaatcctaaccgctgcttacttttctgcaaccaaaacaagtaacttgctctattg 17121440  T
Q  112 caaacagataaaatttgcaatct-ttaacccttaactcttttattt 156  Q
    |||||| || |||  |||||||| ||| |||| |||||||||||||    
T  17121441 caaacaaatgaaaaatgcaatctcttatccctcaactcttttattt 17121486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 98 - 245
Target Start/End: Original strand, 25405558 - 25405704
Alignment:
Q  98 aacttgctctgttgcaaacagataaaatttgcaatcttt--aacccttaactcttttattttatatcgtcaactta---aaataagtaacgcgaattgtt 192  Q
    |||||||||||||||||||| |||||| |||||| ||||  |||||||||        ||||||||||||||||||   |||||||||||| ||| ||||    
T  25405558 aacttgctctgttgcaaacaaataaaaattgcaagctttctaacccttaaac------ttttatatcgtcaacttacaaaaataagtaacgtgaactgtt 25405651  T
Q  193 tggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    ||||| |||| ||||||| ||||||||||||||| ||||||||||||||||||    
T  25405652 tggacgaaacgacaatccttgtggatacgatactttacttatcactttattac 25405704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 49 - 245
Target Start/End: Original strand, 15543844 - 15544040
Alignment:
Q  49 gattcaaagagtcctaaccattgcttacttttctgcaaccaaag-cagataa-cttgctctgttgcaaacagataaaatttgcaa-tctttaacccttaa 145  Q
    ||||| |||| |||||||| ||||||||||||||||||| |||  ||| ||| ||| || ||||||||||| |||||| |||||| |||||      |||    
T  15543844 gattcgaagaatcctaaccgttgcttacttttctgcaacaaaaaacaggtaaacttactatgttgcaaacaaataaaaattgcaactcttt------taa 15543937  T
Q  146 ctcttttattttatatcgtcaacttaaaa---taagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttat 242  Q
    | ||| | |||||||||||||| ||||||   |||||||| |||||||||||||| |||| |||||    ||||||||||||||||||||||||||||||    
T  15543938 cccttatcttttatatcgtcaaattaaaaaaataagtaacacgaattgtttggacgaaacgacaatttccgtggatacgatactctacttatcactttat 15544037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 12 - 245
Target Start/End: Complemental strand, 17359421 - 17359187
Alignment:
Q  12 atgaatgttatttaat-tccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaag-cagataactt-gctctg 108  Q
    |||| ||||||||||| |||||| | |||||||| || ||||| |||| ||||||||    ||||||||| ||||||||||  ||| ||| || ||| ||    
T  17359421 atgattgttatttaatatccaacaatataaatagaggggattcgaagaatcctaaccgcatcttacttttatgcaaccaaaaacaggtaaatttgctatg 17359322  T
Q  109 ttgcaaacagataaaatttgcaa-tctttaacccttaactcttttattttatatcgtcaacttaaaa-taagtaacgcgaattgtttggaccaaacaaca 206  Q
    |||| | ||||||||| |||||| ||| |||||||||  |||||||||  ||||||||||| ||||| ||||||||| ||||| ||||||| |||| |||    
T  17359321 ttgccagcagataaaaattgcaactctctaaccctta--tcttttatt--atatcgtcaacctaaaaataagtaacgagaattatttggacgaaacgaca 17359226  T
Q  207 atccatgtggatacgatactctacttatcactttattac 245  Q
    |||  | |||||| ||||||| |||||||||||||||||    
T  17359225 atctttatggatatgatactcaacttatcactttattac 17359187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 78 - 245
Target Start/End: Original strand, 16787634 - 16787800
Alignment:
Q  78 tttctgcaaccaaagcagataacttgctctgttgcaaacagataaaatttgcaa-tct-ttaacccttaactcttttattttatatcgtcaacttaaaat 175  Q
    ||||| |||||||| ||  ||| ||||| ||||||||||| |||||| |||||| ||| |||||||| ||||||| ||| || ||| ||  |   |||||    
T  16787634 tttctccaaccaaaacaagtaatttgctatgttgcaaacatataaaaattgcaaatctcttaaccctaaactcttatatattttattgttca---aaaat 16787730  T
Q  176 aagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    ||||||||| |||||||||| | |||| |||||| ||||| |||||||||||||||||||||||||||||    
T  16787731 aagtaacgcaaattgtttgggcaaaacgacaatctatgtgaatacgatactctacttatcactttattac 16787800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 12 - 91
Target Start/End: Original strand, 25961007 - 25961085
Alignment:
Q  12 atgaatgttatttaattccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaa 91  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||  | ||||||||||||||||||||    
T  25961007 atgaatgttatttaattccaacaaaataaatagggg-gattcaaagagtcctaaccgcttcttacttttctgcaaccaaa 25961085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 46 - 245
Target Start/End: Complemental strand, 29242731 - 29242544
Alignment:
Q  46 ggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataa-cttgctctgttgcaaacagataaaatttgcaatctttaaccctta 144  Q
    ||||||||||||  ||||||||  | ||||||||| |||||||||| ||| ||| ||||||||||||||||||||||||| |||||| ||         |    
T  29242731 ggagattcaaagtatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaacct---------a 29242641  T
Q  145 actcttttattttatatcgtcaactta---aaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcacttta 241  Q
    |||       |||||||||||||||||   ||||| |||||||||||||||||||  |||| ||||||  | ||||||||||||||||||||||||||||    
T  29242640 act-------tttatatcgtcaacttacaaaaatatgtaacgcgaattgtttggatgaaacgacaatcactatggatacgatactctacttatcacttta 29242548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 12 - 151
Target Start/End: Complemental strand, 16360128 - 16359988
Alignment:
Q  12 atgaatgttatttaattccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgctctgttg 111  Q
    |||||||||| || |||||||| |||||| |||| | |||||  |||||||||||   ||||| |||||||||||||||| ||| ||||||||| |||||    
T  16360128 atgaatgttactttattccaac-aaataactaggtgggattcgtagagtcctaacttatgctttcttttctgcaaccaaaacaggtaacttgctttgttg 16360030  T
Q  112 caaacagataaaatttgcaatctttaa--cccttaactcttt 151  Q
    |||||| |||||| ||||||||| |||  |||||||||||||    
T  16360029 caaacaaataaaaattgcaatctctaatccccttaactcttt 16359988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 172 - 245
Target Start/End: Original strand, 3591654 - 3591727
Alignment:
Q  172 aaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    |||||||||| ||||||||||||||| |||| |||||| ||||||||||||||||||| |||||||||||||||    
T  3591654 aaataagtaaggcgaattgtttggacaaaacgacaatctatgtggatacgatactctatttatcactttattac 3591727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 73 - 245
Target Start/End: Original strand, 15813057 - 15813228
Alignment:
Q  73 ttacttttctgcaaccaaag-cagataacttgctctgttgcaaacagataaaatttgcaatctt--taacccttaactcttttattttatatcgtcaact 169  Q
    |||||||| ||||| ||||| ||| ||||||||| ||||| ||||| |||||| |||||| | |  ||||||||| |||||| |||||||  |||||| |    
T  15813057 ttacttttttgcaagcaaagacaggtaacttgctatgttggaaacatataaaaattgcaaacctcttaacccttatctcttt-attttat--cgtcaaat 15813153  T
Q  170 taaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    |||||||||||||| || ||||||||||  ||| | ||||| ||||||||||||| || |||||||||||||||||    
T  15813154 taaaataagtaacgagagttgtttggacgcaacgaaaatccttgtggatacgatagtc-acttatcactttattac 15813228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 60 - 245
Target Start/End: Complemental strand, 16179217 - 16179032
Alignment:
Q  60 tcctaaccattgcttacttttctgcaaccaaagc-agataa-cttgctctgttgcaaacagataaaatttgcaatctttaacccttaactcttttatttt 157  Q
    ||||||||  ||||||||||||||||||||||   || ||| ||||||||||||||| ||||||||| ||||||      ||   |||| ||| ||||||    
T  16179217 tcctaaccgctgcttacttttctgcaaccaaaaataggtaaacttgctctgttgcaatcagataaaaattgcaag-----acatctaacccttatatttt 16179123  T
Q  158 atatcgtcaactta---aaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    ||||||||||||||   |||||||||||  ||||||||||||| |||| ||  ||| | ||||||||||||||||||||||| ||||||||    
T  16179122 atatcgtcaacttacaaaaataagtaacaagaattgtttggacgaaacgactttccttttggatacgatactctacttatcagtttattac 16179032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 35 - 245
Target Start/End: Complemental strand, 22620498 - 22620287
Alignment:
Q  35 aaataaataggggagattcaaagagtcctaaccattgcttac-ttttctgcaaccaaagcagataacttgctctgttgcaaacagataaaatttgcaatc 133  Q
    |||| ||||| || |||| ||||| || |||||  ||||||| |||||| |||||||| ||| ||||| | | ||||||||||||||||||   ||||||    
T  22620498 aaatgaatagaggggatttaaagaatcttaaccgctgcttacattttctacaaccaaaacaggtaactcgatttgttgcaaacagataaaaaaggcaatc 22620399  T
Q  134 tttaacccttaactcttttattttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctactta 233  Q
    | ||||||| ||||| |||||||||| |  |    | ||||||||||||| ||||| ||| ||| |||  ||||| | | |||||||||||||||| |||    
T  22620398 tctaaccctcaactcctttattttattttattgtttaaaaataagtaacgtgaattatttagacgaaaagacaattcctatggatacgatactctagtta 22620299  T
Q  234 tcactttattac 245  Q
    ||||||||||||    
T  22620298 tcactttattac 22620287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 35 - 245
Target Start/End: Complemental strand, 44795605 - 44795394
Alignment:
Q  35 aaataaataggggagattcaaagagtcct--aaccattgcttacttttctgcaaccaaag-cagataacttgctctgttgcaaacagataaaatttgcaa 131  Q
    |||||||| |||| ||||| |||| ||||  |||| ||| |||| ||||||||||||||  ||||||||| ||| || |||||||| |||||| ||||||    
T  44795605 aaataaattggggggattcgaagaatcctctaaccgttg-ttacatttctgcaaccaaaaacagataactcgctttgctgcaaacatataaaaattgcaa 44795507  T
Q  132 -tct-ttaacccttaactcttttattttatatcgtcaacttaaaataagtaacgcgaattgttt-ggaccaaacaacaatccatgtggatacgatactct 228  Q
     ||| |||||||||| || |||||||||||  | ||||| ||||||||||||  ||| || ||| |||| |||| ||||||||||||||||||||||||     
T  44795506 atctcttaacccttatct-ttttattttat--catcaacataaaataagtaagtcgagtttttttggacgaaacgacaatccatgtggatacgatactc- 44795411  T
Q  229 acttatcactttattac 245  Q
    ||||||| |||||||||    
T  44795410 acttatctctttattac 44795394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 171 - 245
Target Start/End: Original strand, 18736240 - 18736314
Alignment:
Q  171 aaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    |||||||||||||  ||||||||| || |||| ||||||| |||||||||||||| |||||||||||||||||||    
T  18736240 aaaataagtaacggaaattgtttgaacgaaacgacaatccctgtggatacgatacactacttatcactttattac 18736314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 171 - 245
Target Start/End: Complemental strand, 21449188 - 21449114
Alignment:
Q  171 aaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    ||||||||||||   |||||||||| | |||| ||||||| ||||||||||||||||||||||||||||||||||    
T  21449188 aaaataagtaacataaattgtttggccgaaacgacaatccttgtggatacgatactctacttatcactttattac 21449114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 172 - 245
Target Start/End: Complemental strand, 17837615 - 17837542
Alignment:
Q  172 aaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    |||||||||||||||||||||| ||| |||  ||||||| |||||||| |||||||||||||| ||||||||||    
T  17837615 aaataagtaacgcgaattgtttagacaaaatgacaatccttgtggatatgatactctacttataactttattac 17837542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 154 - 245
Target Start/End: Complemental strand, 14779684 - 14779590
Alignment:
Q  154 ttttatatcgtcaactt---aaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    |||||||||||||||||   ||||||| ||||||||  ||||||||| |||| ||||||| |||||||| ||||||||| ||||||| |||||||    
T  14779684 ttttatatcgtcaacttacaaaaataaataacgcgatatgtttggacgaaacgacaatccctgtggatatgatactctaattatcacattattac 14779590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 102 - 233
Target Start/End: Complemental strand, 21847801 - 21847670
Alignment:
Q  102 tgctctgttgcaaacagataaaatttgcaatctttaacccttaactcttttatttta-tatcgtcaacttaaaataagtaacgcgaattgtttggaccaa 200  Q
    ||||| |||||||||| |||||| ||||||||| || || | ||||||||||||||| | | || ||   | | ||||||||| ||||||||||||| ||    
T  21847801 tgctccgttgcaaacaaataaaaattgcaatctctatccttcaactcttttattttaattttgttaaaccaga-taagtaacgtgaattgtttggacgaa 21847703  T
Q  201 acaacaatccatgtggatacgatactctactta 233  Q
    || ||||||||||||||||| ||||||||||||    
T  21847702 acgacaatccatgtggatacaatactctactta 21847670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 49 - 156
Target Start/End: Original strand, 32382886 - 32382994
Alignment:
Q  49 gattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgctctgttgcaaacagataaaatttgcaatct-ttaacccttaact 147  Q
    |||||||||| |||||||   |||| || |||||||||||||| ||| ||| |||||||||||||||||||||||| ||||||| | | |||| | ||||    
T  32382886 gattcaaagaatcctaacggctgctaacatttctgcaaccaaaacaggtaatttgctctgttgcaaacagataaaaattgcaatatctcaaccttcaact 32382985  T
Q  148 cttttattt 156  Q
    |||||||||    
T  32382986 cttttattt 32382994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 171 - 244
Target Start/End: Original strand, 21987982 - 21988055
Alignment:
Q  171 aaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttatta 244  Q
    |||||||||||||||||||| |||||| |||  ||||||   | ||||||||||||||||||||||||||||||    
T  21987982 aaaataagtaacgcgaattgattggacgaaatgacaatctccgaggatacgatactctacttatcactttatta 21988055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 172 - 245
Target Start/End: Original strand, 24306307 - 24306379
Alignment:
Q  172 aaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    |||||||||||||||||| |||||   ||||  |||||| ||||||||||||||||||||||||||||||||||    
T  24306307 aaataagtaacgcgaattatttggttgaaacg-caatccctgtggatacgatactctacttatcactttattac 24306379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 154 - 245
Target Start/End: Original strand, 21334699 - 21334793
Alignment:
Q  154 ttttatatcgtcaacttaaaa---taagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    |||||||||||||||||||||   ||||||||| ||||||||||||  |||  ||||| | |  |||||||||||| ||||||||||||||||||    
T  21334699 ttttatatcgtcaacttaaaaaaataagtaacgagaattgtttggaagaaatgacaattcctccggatacgatactatacttatcactttattac 21334793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 171 - 245
Target Start/End: Original strand, 16916933 - 16917008
Alignment:
Q  171 aaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctactta-tcactttattac 245  Q
    ||||||||||||| |||||||| |||| |||  ||||||| |||||||||||||||||||||| | ||||||||||    
T  16916933 aaaataagtaacgagaattgttcggacgaaaggacaatccctgtggatacgatactctacttactaactttattac 16917008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 245
Target Start/End: Original strand, 26648966 - 26649044
Alignment:
Q  166 aacttaaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    |||||||||||| |||||||| |||||||||| |||| | ||||||||||||||| ||| || |||||||| ||||||||    
T  26648966 aacttaaaataaataacgcgagttgtttggacgaaacgataatccatgtggatacaatattc-acttatcattttattac 26649044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 171 - 245
Target Start/End: Complemental strand, 727566 - 727492
Alignment:
Q  171 aaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    ||||||||||||  |||||||| |||| ||| |  ||||| ||||||| ||||||||||||||||||||||||||    
T  727566 aaaataagtaacaagaattgttcggacgaaagagtaatccttgtggatgcgatactctacttatcactttattac 727492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 163 - 243
Target Start/End: Original strand, 15813516 - 15813597
Alignment:
Q  163 gtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctac-ttatcactttatt 243  Q
    ||||||| |||||||||||| ||||||||||  |  |||| ||||||| ||||||||| ||||||||| |||||||||||||    
T  15813516 gtcaactaaaaataagtaacacgaattgtttcaaagaaacgacaatccttgtggatacaatactctactttatcactttatt 15813597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 172 - 245
Target Start/End: Original strand, 24267783 - 24267856
Alignment:
Q  172 aaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    |||||||||||| |||||| || ||| ||||||||||| || |||||| |||||| ||||||||| ||||||||    
T  24267783 aaataagtaacgtgaattgattagacgaaacaacaatctatatggatatgatactatacttatcattttattac 24267856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 173 - 245
Target Start/End: Original strand, 27117720 - 27117792
Alignment:
Q  173 aataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    ||||||||||||  |||||||||   |||| ||||| |||||| |||| ||||||||||||||||||||||||    
T  27117720 aataagtaacgcagattgtttggttgaaacgacaattcatgtgaatacaatactctacttatcactttattac 27117792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 70 - 245
Target Start/End: Complemental strand, 22623091 - 22622915
Alignment:
Q  70 tgcttacttttctgcaaccaaagcagat-aacttgctctgttgcaaacagataaaatttgcaa---tctttaacccttaactcttttattttatatcgtc 165  Q
    |||||||||||||||||||||| ||| | |||||||||||||||||| | |||||| | ||||   | ||||||| |||||       ||| ||| | ||    
T  22623091 tgcttacttttctgcaaccaaaacaggtaaacttgctctgttgcaaatatataaaaatggcaagtctttttaaccgttaac-------tttaataccatc 22622999  T
Q  166 aactt----aaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    |||||    ||| ||||||||||||||| ||||||| |||  ||||||| |  ||||| ||||||||||| |||||||||||||    
T  22622998 aacttaataaaattaagtaacgcgaattttttggacgaaaggacaatcccttaggatatgatactctactaatcactttattac 22622915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 60 - 124
Target Start/End: Original strand, 18529080 - 18529145
Alignment:
Q  60 tcctaaccattgcttacttttctgcaaccaaagcagat-aacttgctctgttgcaaacagataaaa 124  Q
    ||||||||| ||||||||||||| |||||||| ||| | ||||||||||||||||||  |||||||    
T  18529080 tcctaaccactgcttacttttctacaaccaaaacaggtaaacttgctctgttgcaaattgataaaa 18529145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 124
Target Start/End: Original strand, 16069460 - 16069515
Alignment:
Q  70 tgcttacttttctgcaaccaaagcagataa-cttgctctgttgcaaacagataaaa 124  Q
    ||||||||||||| |||||||| ||| ||| ||||||||||||||| |||||||||    
T  16069460 tgcttacttttctacaaccaaaacaggtaaacttgctctgttgcaagcagataaaa 16069515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 21449333 - 21449222
Alignment:
Q  16 atgttatttaat-tccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaacc-aaagcagat-aacttgctctgttgc 112  Q
    |||||| ||||| |||||| | ||||| ||| | ||||| |||| ||||||||  |||||||||||||||| || ||| ||| | |||||||| ||||||    
T  21449333 atgttacttaatatccaacaatataaacaggagggattcgaagaatcctaaccgctgcttacttttctgcatccaaaaacagttaaacttgctatgttgc 21449234  T
Q  113 aaacagataaaa 124  Q
    ||||||||||||    
T  21449233 aaacagataaaa 21449222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 245
Target Start/End: Complemental strand, 18825750 - 18825680
Alignment:
Q  175 taagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    |||||||||  ||||||| | || |||  |||| || ||||||||||||||| ||||||||||||||||||    
T  18825750 taagtaacgaaaattgttcgaactaaaggacaacccttgtggatacgatactttacttatcactttattac 18825680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 100
Target Start/End: Original strand, 15813383 - 15813471
Alignment:
Q  12 atgaatgttatttaat-tccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataac 100  Q
    |||||||||||||||| | ||||  |||||||||||| ||||| |||| | |||||   |||||||||||||||||||||| ||| ||||    
T  15813383 atgaatgttatttaatatacaacataataaatagggg-gattctaagaatactaactgctgcttacttttctgcaaccaaaacaggtaac 15813471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 131
Target Start/End: Original strand, 18736180 - 18736213
Alignment:
Q  98 aacttgctctgttgcaaacagataaaatttgcaa 131  Q
    |||||||||| |||||||||||||||||||||||    
T  18736180 aacttgctctattgcaaacagataaaatttgcaa 18736213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 73 - 129
Target Start/End: Original strand, 21973107 - 21973164
Alignment:
Q  73 ttacttttctgcaaccaaag-cagataacttgctctgttgcaaacagataaaatttgc 129  Q
    |||||||||||||||||||  ||| ||||||| | |||||||||||||||||| ||||    
T  21973107 ttacttttctgcaaccaaaaacaggtaacttgttatgttgcaaacagataaaaattgc 21973164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 131
Target Start/End: Original strand, 16916823 - 16916907
Alignment:
Q  49 gattcaaagagtcctaaccattgcttacttttctgcaacc-aaagcagataactt-gctctgttgcaaacagataaaatttgcaa 131  Q
    ||||| |||| ||||| ||  ||||||||||||||||||| ||| ||| ||| || ||||||||||||| |||||||| ||||||    
T  16916823 gattcgaagaatcctacccgctgcttacttttctgcaaccaaaaacaggtaaattcgctctgttgcaaagagataaaaattgcaa 16916907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 110; Significance: 2e-55; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 12 - 245
Target Start/End: Original strand, 18208092 - 18208322
Alignment:
Q  12 atgaatgttatttaattccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgctctgttg 111  Q
    |||||||||||||||||||||| ||||| ||||||| ||||| ||||||  ||||   | |||||||||||||||||||| ||| |||||||||||  ||    
T  18208092 atgaatgttatttaattccaacaaaatacatagggg-gattcgaagagttgtaactgctacttacttttctgcaaccaaa-caggtaacttgctctactg 18208189  T
Q  112 caaacagataaaatttgcaatctttaacccttaactcttttattttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaatcca 211  Q
    ||||||||||||| |||||| ||  |||||||||||||||||||||||||| ||||   ||||||||||||  ||||||||||||| |||  ||||||||    
T  18208190 caaacagataaaaattgcaacctccaacccttaactcttttattttatatcatcaaaacaaaataagtaacatgaattgtttggacgaaaggacaatcca 18208289  T
Q  212 tgtggatacgatactctacttatcactttattac 245  Q
    |||||||||||||||||||||| |||||||||||    
T  18208290 tgtggatacgatactctactta-cactttattac 18208322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 12 - 245
Target Start/End: Complemental strand, 34487891 - 34487663
Alignment:
Q  12 atgaatgttatttaattccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgctctgttg 111  Q
    ||||||||||||||||||| || ||||| ||||||| ||||| ||||||||||||||   || ||||||||||||||||| ||  ||| |||||||||||    
T  34487891 atgaatgttatttaattccgacaaaatagatagggg-gattctaagagtcctaacca---ctaacttttctgcaaccaaa-catgtaaattgctctgttg 34487797  T
Q  112 caaacagataaaatttgcaatctttaacccttaactcttttatt-ttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaatcc 210  Q
     |||||||||||| ||||||||| ||||||||| || ||||||| ||||||||||||   ||||||||||||||||||||||| ||| |||| |||||||    
T  34487796 aaaacagataaaaattgcaatctctaacccttatcttttttattattatatcgtcaaaacaaaataagtaacgcgaattgtttagacgaaacgacaatcc 34487697  T
Q  211 atgtggatacgatactctacttatcactttattac 245  Q
    ||||||||| |||| |||||||| |||||||||||    
T  34487696 atgtggatatgatattctactta-cactttattac 34487663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 12 - 245
Target Start/End: Original strand, 24266799 - 24267028
Alignment:
Q  12 atgaatgttatttaattccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgctctgttg 111  Q
    |||||||| ||||||||||| | ||||||||||||  ||||| |||||||||||||  |||||||||| ||| ||||||| ||| |  |||||| ||||     
T  24266799 atgaatgtcatttaattccatcaaaataaatagggaggattcgaagagtcctaaccgctgcttacttt-ctgtaaccaaa-caggt--cttgctttgtta 24266894  T
Q  112 caaacagataaaatttgcaatctttaacccttaactcttttatt-ttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaatcc 210  Q
    ||||||||||||| ||||||| | |||||||||||||||||||| ||||||||||||   |||||||||||| |||||||||||||| |||  | |||||    
T  24266895 caaacagataaaaattgcaatatctaacccttaactcttttattattatatcgtcaaaacaaaataagtaacacgaattgtttggacaaaatgataatcc 24266994  T
Q  211 atgtggatacgatactctacttatcactttattac 245  Q
     |||||||||||||||||||||| |||||||||||    
T  24266995 ttgtggatacgatactctactta-cactttattac 24267028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 12 - 245
Target Start/End: Original strand, 24343430 - 24343659
Alignment:
Q  12 atgaatgttatttaattccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgctctgttg 111  Q
    |||||||| ||||||||||| | ||||||||||||  ||||| |||||||||||||  |||||||||| ||| ||||||| ||| |  |||||| ||||     
T  24343430 atgaatgtcatttaattccatcaaaataaatagggaggattcgaagagtcctaaccgctgcttacttt-ctgtaaccaaa-caggt--cttgctttgtta 24343525  T
Q  112 caaacagataaaatttgcaatctttaacccttaactcttttatt-ttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaatcc 210  Q
    ||||||||||||| ||||||| | |||||||||||||||||||| ||||||||||||   |||||||||||| |||||||||||||| |||  | |||||    
T  24343526 caaacagataaaaattgcaatatctaacccttaactcttttattattatatcgtcaaaacaaaataagtaacacgaattgtttggacaaaatgataatcc 24343625  T
Q  211 atgtggatacgatactctacttatcactttattac 245  Q
     |||||||||||||||||||||| |||||||||||    
T  24343626 ttgtggatacgatactctactta-cactttattac 24343659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 12 - 245
Target Start/End: Complemental strand, 22755780 - 22755546
Alignment:
Q  12 atgaatgttatttaat-tccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgctctgtt 110  Q
    |||||||||||||||| ||||| ||||||||||||||  |||| |||| || ||| | ||| |||||||| || ||||||| |   ||||||||||||||    
T  22755780 atgaatgttatttaatatccaa-gaaataaatagggggaattctaagaatcataatcgttgattacttttttggaaccaaaactagtaacttgctctgtt 22755682  T
Q  111 gcaaacagataaaatttgcaa-tctttaacccttaactcttttattttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaatc 209  Q
    |||||||||||||| ||| || ||| ||||||||||||||||||||||||||||| ||  |||||||| ||| || |||||||||||  |||| ||||||    
T  22755681 gcaaacagataaaaattgtaaatctctaacccttaactcttttattttatatcgtaaaactaaaataaataatgccaattgtttggaagaaacgacaatc 22755582  T
Q  210 catgtggatacgatactctacttatcactttattac 245  Q
    | | |||||||||||||||||||||| ||| |||||    
T  22755581 cttatggatacgatactctacttatctcttcattac 22755546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 40 - 245
Target Start/End: Complemental strand, 18937979 - 18937773
Alignment:
Q  40 aataggggagattcaaagagtcct--aaccattgcttacttttctgcaaccaaag-cagataacttgctctgttgcaaacagataaaatttgcaatcttt 136  Q
    |||||||| |||||||||| ||||  ||||| || |||| ||||||||||||||  ||  |||||||||||||||||||||||||||| ||| ||||| |    
T  18937979 aataggggggattcaaagaatcctctaaccactg-ttacatttctgcaaccaaaaacatgtaacttgctctgttgcaaacagataaaaattgaaatctct 18937881  T
Q  137 -aacccttaactcttttattttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatc 235  Q
     ||||||||||||||| |||||||||| | |||||||||||||||||| ||||||||||||| |||||||||||| | || |||||||||| ||||||||    
T  18937880 caacccttaactcttt-attttatatcattaacttaaaataagtaacgtgaattgtttggacgaaacaacaatccctctgaatacgatact-tacttatc 18937783  T
Q  236 actttattac 245  Q
    ||||||||||    
T  18937782 actttattac 18937773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 12 - 244
Target Start/End: Complemental strand, 15691034 - 15690803
Alignment:
Q  12 atgaatgttatttaat-tccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgctctgtt 110  Q
    |||| ||||||||||| ||||||  |||||||||||| ||||| |||| ||||||| | |||||||||||||||||||||| ||| ||| ||||||||||    
T  15691034 atgactgttatttaatatccaacataataaatagggg-gattcgaagaatcctaac-actgcttacttttctgcaaccaaaacaggtaatttgctctgtt 15690937  T
Q  111 gcaaacagataaaatttgcaa-tctttaaccctt-aactcttttattttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaat 208  Q
     | |||| |||||| |||||| ||| |||||||| ||||||||||||| || | ||||||| ||||||||||||| |||||| |||||| |||| |||||    
T  15690936 acgaacaaataaaaattgcaaatctctaaccctttaactcttttattt-attt-gtcaactaaaaataagtaacgagaattggttggacgaaacgacaat 15690839  T
Q  209 ccatgtggatacgatactctacttatcactttatta 244  Q
     |  ||||||||||||||||||||||||||||||||    
T  15690838 tctcgtggatacgatactctacttatcactttatta 15690803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 70 - 245
Target Start/End: Original strand, 17171453 - 17171627
Alignment:
Q  70 tgcttacttttctgcaaccaaagcagataacttgctctgttgcaaacagataaaatttgcaatctttaacccttaactcttttatt--ttatatcgtcaa 167  Q
    ||||||| ||| |||||||||||||| ||||||||||||||||||  |||||||| ||||||||| ||||||| ||||||||||||  |||| | ||       
T  17171453 tgcttacatttttgcaaccaaagcaggtaacttgctctgttgcaactagataaaaattgcaatctctaaccctcaactcttttatttattattttgt--- 17171549  T
Q  168 cttaaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
     ||||||||| |||||||||||| || ||| |||| |||||||||||||||||||| |||||||||||||||||||||    
T  17171550 tttaaaataattaacgcgaattgcttagacgaaacgacaatccatgtggatacgatgctctacttatcactttattac 17171627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 41 - 244
Target Start/End: Original strand, 19283726 - 19283928
Alignment:
Q  41 ataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgctctgttgcaaacagataaaatttgcaatctttaacc 140  Q
    ||||||| ||||  || |||| |||||  |||||| |||||| |||||||| ||| |||||| |||| ||||||| |||| ||| ||| ||||| |||||    
T  19283726 ataggggggatttgaaaagtcttaaccgctgcttaattttctacaaccaaa-caggtaactttctctattgcaaatagattaaaattgtaatctctaacc 19283824  T
Q  141 cttaactcttttattttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcacttt 240  Q
    ||||||||||||| ||||||||||||||||||||||||| | || |||||||||||| ||||   ||| | ||||||||| |||||||||||||||||||    
T  19283825 cttaactcttttactttatatcgtcaacttaaaataagttaagcaaattgtttggacgaaacgttaattcttgtggatacaatactctacttatcacttt 19283924  T
Q  241 atta 244  Q
    ||||    
T  19283925 atta 19283928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 11 - 230
Target Start/End: Complemental strand, 36175391 - 36175173
Alignment:
Q  11 gatgaatgttatttaattccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgctctgtt 110  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||| || |||||  | ||||||||||| |||||||| ||| ||||||||| ||||    
T  36175391 gatgaatgttatttaattccaac-aaataaataggagagattcaaagaatcataaccgcttcttacttttctacaaccaaaacaggtaacttgctttgtt 36175293  T
Q  111 gcaaacagataaaatttgcaatctttaacccttaactcttttattttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaatcc 210  Q
    | |||||||||||| ||||||||| ||||||| |||||||||||||  | |  |      ||||||||||||||   |||||||||| |||| |||||||    
T  36175292 gaaaacagataaaaattgcaatctctaaccctcaactcttttatttattttaattgttcaaaaataagtaacgcatgttgtttggacgaaacgacaatcc 36175193  T
Q  211 atgtggatacgatactctac 230  Q
     | |||||||||||||||||    
T  36175192 ttatggatacgatactctac 36175173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 12 - 209
Target Start/End: Original strand, 24662018 - 24662214
Alignment:
Q  12 atgaatgttatttaattccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgctctgttg 111  Q
    |||||| ||||||| ||||||| ||||| ||| ||| || || ||||||| |||||  | |||||||| ||||||| |||  || ||||||||||||||     
T  24662018 atgaatcttatttacttccaacaaaatatatatgggggaatcgaagagtcttaaccgctacttactttactgcaacaaaacaag-taacttgctctgttt 24662116  T
Q  112 caaacagataaaatttgcaatctttaacccttaactcttttattttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaatc 209  Q
    ||||||  ||||| ||| ||||  ||||||||||||||||||||||||||||| ||  |||||||||||||| ||||||||| | | |||||||||||    
T  24662117 caaacaactaaaaattgaaatcgctaacccttaactcttttattttatatcgttaaactaaaataagtaacgtgaattgtttaggcgaaacaacaatc 24662214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 28 - 245
Target Start/End: Original strand, 24245401 - 24245618
Alignment:
Q  28 tccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataa-cttgctctgttgcaaacagataaaatt 126  Q
    |||||| | ||||| ||||| ||||| |||| |||||||| ||||||||||||||||||| ||| ||| ||| |||||| ||||| ||||| |||||| |    
T  24245401 tccaacaatataaacagggg-gattcgaagaatcctaaccgttgcttacttttctgcaactaaaacaggtaaacttgctttgttggaaacaaataaaaat 24245499  T
Q  127 tgcaatctttaacccttaactcttttat--tttatatcgtcaactta---aaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacg 221  Q
     | || ||||      |||| |||||||  |||||||  ||||||||   ||||||||||||||| |||||||||| |||| ||||||| ||||||||||    
T  24245500 cgaaacctttc-----taacccttttatcttttatattctcaacttacaaaaataagtaacgcgagttgtttggacgaaacgacaatccttgtggatacg 24245594  T
Q  222 atactctacttatcactttattac 245  Q
    ||||||||||||||||||||||||    
T  24245595 atactctacttatcactttattac 24245618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 98 - 245
Target Start/End: Original strand, 20315357 - 20315504
Alignment:
Q  98 aacttgctctgttgcaaacagataaaatttgcaa---tctttaacccttaactcttttattttatatcgtcaacttaa----aataagtaacgcgaattg 190  Q
    |||||||| |||||||||||||||||| ||||||   |||||| |||||||       ||||||||||||||||||||    ||||||| ||||||||||    
T  20315357 aacttgctttgttgcaaacagataaaaattgcaagtttctttatcccttaa-------attttatatcgtcaacttaataaaaataagttacgcgaattg 20315449  T
Q  191 tttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    ||||||| |||  | |||||||||||||||||||||||||||||||| |||||||    
T  20315450 tttggacgaaaggataatccatgtggatacgatactctacttatcacattattac 20315504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 12 - 233
Target Start/End: Complemental strand, 26121120 - 26120901
Alignment:
Q  12 atgaatgttatttaattccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgctctgttg 111  Q
    |||||||||||||||||||||| |||| |||||||| ||||| |||| | ||||||| ||||||| |||||||||| ||| ||| || ||| || || ||    
T  26121120 atgaatgttatttaattccaac-aaattaataggggtgattcgaagaattctaaccactgcttacatttctgcaacaaaa-caggtatctttctatgctg 26121023  T
Q  112 caaacagataaaatttgcaatctttaacccttaactcttttattttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaatcca 211  Q
    ||||||||||||| ||  ||| | ||||||| |||||||||||||||| |  |      ||||||||||| || |||||||||||| |||| |||||||     
T  26121022 caaacagataaaaattaaaatatctaaccctcaactcttttattttattttattgttcaaaaataagtaatgctaattgtttggacgaaacgacaatcct 26120923  T
Q  212 tgtggatacgatactctactta 233  Q
    | || ||| |||||||||||||    
T  26120922 tttgaatatgatactctactta 26120901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 98 - 245
Target Start/End: Original strand, 19004155 - 19004300
Alignment:
Q  98 aacttgctctgttgcaaacagataaaatttgcaa-tctttaacccttaactcttttattttatatcgtcaa-ctta---aaataagtaacgcgaattgtt 192  Q
    ||||||| ||||||||||||||||||| |||||| | ||||||||||| ||       ||||||||||||| ||||   |||||||||||| ||||||||    
T  19004155 aacttgccctgttgcaaacagataaaaattgcaactatttaacccttatct-------tttatatcgtcaaacttacaaaaataagtaacgtgaattgtt 19004247  T
Q  193 tggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    ||||| |||  |||||||||||||||||||||||| |||||||||||||||||    
T  19004248 tggacaaaatgacaatccatgtggatacgatactccacttatcactttattac 19004300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 7 - 143
Target Start/End: Original strand, 24265311 - 24265447
Alignment:
Q  7 gtgagatgaatgttatttaattccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgctc 106  Q
    |||| |||| |||||||||| |||||| || ||||||||||  ||||||| ||||||||||  |||||||||||||||||| |||  || |||||||||     
T  24265311 gtgacatgactgttatttaaatccaacaaagtaaatagggggaattcaaatagtcctaaccgctgcttacttttctgcaactaaataaggtaacttgctt 24265410  T
Q  107 tgttgcaaacagataaaatttgcaatctttaaccctt 143  Q
    | |||||||||||||||| ||||||| | ||||||||    
T  24265411 tattgcaaacagataaaaattgcaatatctaaccctt 24265447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 7 - 143
Target Start/End: Original strand, 24341942 - 24342078
Alignment:
Q  7 gtgagatgaatgttatttaattccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgctc 106  Q
    |||| |||| |||||||||| |||||| || ||||||||||  ||||||| ||||||||||  |||||||||||||||||| |||  || |||||||||     
T  24341942 gtgacatgactgttatttaaatccaacaaagtaaatagggggaattcaaatagtcctaaccgctgcttacttttctgcaactaaataaggtaacttgctt 24342041  T
Q  107 tgttgcaaacagataaaatttgcaatctttaaccctt 143  Q
    | |||||||||||||||| ||||||| | ||||||||    
T  24342042 tattgcaaacagataaaaattgcaatatctaaccctt 24342078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 112 - 239
Target Start/End: Original strand, 25402278 - 25402405
Alignment:
Q  112 caaacagataaaatttgcaa-tctttaacccttaactcttttattttatatcgtcaa-cttaaaataagtaacgcgaattgtttggaccaaacaacaatc 209  Q
    ||||||||||||| |||||| ||| |||||||| |||||||||||||||   ||||| |||||||||||||||||||||  || |||| |||| ||||||    
T  25402278 caaacagataaaaattgcaaatctctaacccttcactcttttattttatt--gtcaaacttaaaataagtaacgcgaatcattaggacgaaacgacaatc 25402375  T
Q  210 catgtggatacgatactctacttatcactt 239  Q
    | ||||||||| ||||||||||||||||||    
T  25402376 cctgtggatacaatactctacttatcactt 25402405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 12 - 137
Target Start/End: Original strand, 26121165 - 26121290
Alignment:
Q  12 atgaatgttatttaattccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaacc-aaagcagataacttgctctgtt 110  Q
    |||||||||  ||||||||||| ||| ||||||||| |||||||||| ||||||||| | |||||||||||| |||| |||  |||||||||||||| ||    
T  26121165 atgaatgttgattaattccaac-aaagaaataggggggattcaaagaatcctaaccactacttacttttctgtaaccaaaaatagataacttgctctctt 26121263  T
Q  111 gcaaacagataaaatttgcaatcttta 137  Q
    |||||||||||||| || |||||||||    
T  26121264 gcaaacagataaaaattacaatcttta 26121290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 35 - 245
Target Start/End: Original strand, 24852036 - 24852246
Alignment:
Q  35 aaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataactt-gctctgttgcaaacagataaaatttgcaat- 132  Q
    |||| ||||| || |||||||||| ||||||||| ||||  | || || |||||||| ||| |||||| |||||||||||||||||| || ||| |||      
T  24852036 aaatgaatagaggggattcaaagaatcctaaccactgctatcatt-ctacaaccaaaacaggtaactttgctctgttgcaaacagattaactttccaaaa 24852134  T
Q  133 ctttaa-cccttaactcttttattttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctact 231  Q
    |||||| ||||||  ||||||||||||||   |     | |||||||||||| ||||||||| ||| |||||||||||||||||||||||||||| ||||    
T  24852135 ctttaaaccctta--tcttttattttataattttgttctcaaataagtaacgtgaattgtttagacgaaacaacaatccatgtggatacgatactatact 24852232  T
Q  232 tatcactttattac 245  Q
    ||||| ||||||||    
T  24852233 tatcattttattac 24852246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 78 - 226
Target Start/End: Complemental strand, 24260708 - 24260560
Alignment:
Q  78 tttctgcaaccaaagcagataacttgctctgttgcaaacagataaaatttgc-aatctttaacccttaactctttt-att-ttatatcgtcaacttaaaa 174  Q
    ||||||||||||||  || |||||||||||||||||||||||||||| |||| ||||| ||||||| ||||||||| ||| || ||| ||| |   ||||    
T  24260708 tttctgcaaccaaaataggtaacttgctctgttgcaaacagataaaaattgcaaatctctaaccctcaactcttttgattattttattgtcca---aaaa 24260612  T
Q  175 taagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatact 226  Q
    ||||||||||| ||| ||||||| |||  ||||||| |||||||||||||||    
T  24260611 taagtaacgcggattttttggacgaaatgacaatccttgtggatacgatact 24260560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 156 - 245
Target Start/End: Original strand, 25550487 - 25550578
Alignment:
Q  156 ttatatcgtcaactta--aaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    ||||||||||||||||  |||||||||||  ||||||||||||| |||  ||||||| |||||||| |||||||||||||||||||||||||    
T  25550487 ttatatcgtcaacttacaaaataagtaacaagaattgtttggacgaaatgacaatccctgtggatatgatactctacttatcactttattac 25550578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 49 - 245
Target Start/End: Complemental strand, 39434676 - 39434487
Alignment:
Q  49 gattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgctctgttgcaaacagataaaatttgcaatc---tttaacccttaa 145  Q
    ||||| |||| |||||||| |||||||||||||||||| |||| ||| |||  |       ||||||||||||||| |||||||    ||||||||||||    
T  39434676 gattcgaagaatcctaaccgttgcttacttttctgcaaacaaaacaggtaaact-------tgcaaacagataaaaattgcaattctttttaacccttaa 39434584  T
Q  146 ctcttttattttatatcgtcaacttaa----aataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcacttta 241  Q
    ||       ||||||||||||| ||||    ||||||||||||||||||||||||| |||  ||||||||||||||||||||  ||||||||||| ||||    
T  39434583 ct-------tttatatcgtcaagttaataaaaataagtaacgcgaattgtttggacaaaaggacaatccatgtggatacgattttctacttatcaattta 39434491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 50 - 245
Target Start/End: Complemental strand, 17432103 - 17431908
Alignment:
Q  50 attcaaagagtcctaaccattgcttacttttctgcaaccaaagc-agataacttgctctgttgcaaacagataaaatttgcaa-tctttaacccttaact 147  Q
    |||| |||| ||||||||  |||||||||||||||||||||| | ||  |||||||||||||||||||||| |||| || ||| |||||||||||||       
T  17432103 attcgaagaatcctaaccgctgcttacttttctgcaaccaaaacaagtaaacttgctctgttgcaaacagaaaaaaattacaactctttaaccctta--- 17432007  T
Q  148 cttttattttatatcgtc--aactt---aaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttat 242  Q
        |||||||||||| |  |||||   |||||||||| || || |||||||||  |||| ||||||  |||||||||||||||||||||  ||||||||    
T  17432006 ----tattttatatcgccaaaacttataaaaataagtagcgtgagttgtttggatgaaacgacaatctctgtggatacgatactctactttccactttat 17431911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 171 - 245
Target Start/End: Original strand, 23388838 - 23388912
Alignment:
Q  171 aaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    ||||||||||||  |||||||| |||| |||  ||||||||||||||||||||||||||||||||||||||||||    
T  23388838 aaaataagtaacaagaattgttcggacgaaaggacaatccatgtggatacgatactctacttatcactttattac 23388912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 55 - 245
Target Start/End: Complemental strand, 24140651 - 24140467
Alignment:
Q  55 aagagtcctaaccattgcttacttttctgcaaccaaagcagataa-cttgctctgttgcaaacagataaaatttgcaa---tctttaacccttaactctt 150  Q
    |||| |||||||| |||||||||||||||||||||||  || ||| |||||||||| ||| |||||||||| ||| ||   |||||||||||||  || |    
T  24140651 aagaatcctaaccgttgcttacttttctgcaaccaaaataggtaaacttgctctgtcgcacacagataaaaattggaagtctctttaacccttatatcgt 24140552  T
Q  151 ttattttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    | | || |||          |||||| |||||||||||||||||||| |||  |||||||  |||||||| ||||||||||||||||||||||||    
T  24140551 taacttaata----------aaaatatgtaacgcgaattgtttggacgaaaggacaatcccagtggatacaatactctacttatcactttattac 24140467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 49 - 245
Target Start/End: Complemental strand, 34128857 - 34128661
Alignment:
Q  49 gattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataa-cttgctctgttgcaaacagataaaatttgcaa---tctttaaccctta 144  Q
    ||||| |||| |||||||| ||||||||||||||||||||||| ||| ||| |||||||| |||||||||  | ||| || |||   | |||||||||||    
T  34128857 gattcgaagaatcctaaccgttgcttacttttctgcaaccaaaacaggtaaacttgctctattgcaaacaagtcaaaatttcaagtctttttaaccctta 34128758  T
Q  145 actcttttattttatatcgtcaactta---aaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcacttta 241  Q
    |||       |||||| | ||||||||   ||||||| |||| ||||| ||||||| |||  ||||| | ||||||||||||| ||||||||||||||||    
T  34128757 act-------tttataccttcaacttataaaaataagaaacgagaattttttggacgaaaggacaattcctgtggatacgatattctacttatcacttta 34128665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 204
Target Start/End: Original strand, 20744513 - 20744701
Alignment:
Q  16 atgttatttaat-tccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataa-cttgctctgttgca 113  Q
    |||||||||||| || ||| | ||||| ||| | ||||| |||| ||||||||  ||||||||||||| |||||||| ||| ||| |||||| |||||||    
T  20744513 atgttatttaatatcaaacaatataaacaggtgggattcgaagaatcctaaccgctgcttacttttctacaaccaaaacaggtaaacttgctatgttgca 20744612  T
Q  114 aacagataaaatttgcaa-tctttaacccttaactcttttattttatatcgtc-aactt---aaaataagtaacgcgaattgtttggaccaaacaa 204  Q
    ||||||||||| |||||| ||| |||||||||||       |||||||||||| |||||   ||||||||||||| ||| ||||||||| ||||||    
T  20744613 aacagataaaaattgcaactctctaacccttaac-------ttttatatcgtcaaacttacaaaaataagtaacgtgaaatgtttggacgaaacaa 20744701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 153 - 244
Target Start/End: Original strand, 15375861 - 15375955
Alignment:
Q  153 attttatatcgtcaactt---aaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttatta 244  Q
    |||||||| |||||||||   ||||||||||| || |||| ||||||| |||| ||||||| |||||||| |||||||||||||||| |||||||    
T  15375861 attttataccgtcaacttgcaaaaataagtaatgcaaattttttggacgaaacgacaatccctgtggataggatactctacttatcattttatta 15375955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 171 - 245
Target Start/End: Original strand, 17315100 - 17315174
Alignment:
Q  171 aaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    ||||||||||||  |||||||| |||  |||  ||||||||||||||||||||||| ||||||||||||||||||    
T  17315100 aaaataagtaactagaattgttcggaagaaaggacaatccatgtggatacgatactttacttatcactttattac 17315174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 172 - 244
Target Start/End: Complemental strand, 17185561 - 17185489
Alignment:
Q  172 aaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttatta 244  Q
    ||||| |||||| |||||||||||   |||| ||||||| ||| |||||||||||||||||||||||||||||    
T  17185561 aaatacgtaacgtgaattgtttggttgaaacgacaatccctgtagatacgatactctacttatcactttatta 17185489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 173 - 245
Target Start/End: Original strand, 19086181 - 19086253
Alignment:
Q  173 aataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    ||||||||||  |||||| || ||| |||||||||| ||||||||||  ||||||||||||||||||||||||    
T  19086181 aataagtaacatgaattgatttgacaaaacaacaattcatgtggatataatactctacttatcactttattac 19086253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 97 - 245
Target Start/End: Complemental strand, 15470112 - 15469961
Alignment:
Q  97 taacttgctctgttgcaaacagat-aaaatttgcaatctttaa-ccctta-actcttttattttatatcgtcaacttaaaataagtaacgcgaattgttt 193  Q
    |||||||||||||||||||||||| |||||||  ||||| ||| |||||| | | ||||||||||||   ||    | |||||| || || |||||||||    
T  15470112 taacttgctctgttgcaaacagatcaaaatttcaaatctctaaacccttatagtattttattttataatttcgttctcaaataaatagcgtgaattgttt 15470013  T
Q  194 ggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
     ||| |||| ||||| |||||||||||||||||| || ||||||||||||||    
T  15470012 agacgaaacgacaattcatgtggatacgatactcgacctatcactttattac 15469961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 171 - 245
Target Start/End: Original strand, 20564080 - 20564155
Alignment:
Q  171 aaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctactta-tcactttattac 245  Q
    ||||||||||||  |||  |||||||| ||| ||||||||||||||||||||||||||||||| | ||||||||||    
T  20564080 aaaataagtaactagaagcgtttggacgaaagaacaatccatgtggatacgatactctacttactaactttattac 20564155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 49 - 129
Target Start/End: Complemental strand, 28664983 - 28664902
Alignment:
Q  49 gattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataactt-gctctgttgcaaacagataaaatttgc 129  Q
    ||||| |||| || ||||| ||||||| ||||||||||||||| ||| ||| || |||||||||||||||||||||| ||||    
T  28664983 gattcgaagaatcttaaccgttgcttatttttctgcaaccaaaacaggtaaattcgctctgttgcaaacagataaaaattgc 28664902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 244
Target Start/End: Original strand, 24656854 - 24656926
Alignment:
Q  172 aaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttatta 244  Q
    ||||||||||| |||||||||| ||| |||||||||||||||| |||  ||| |||||||||| | |||||||    
T  24656854 aaataagtaacacgaattgtttagacgaaacaacaatccatgttgatttgattctctacttataattttatta 24656926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 171 - 233
Target Start/End: Original strand, 20549704 - 20549766
Alignment:
Q  171 aaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctactta 233  Q
    ||||||||||||  |||||||| |||| |||  ||||||| ||||||||||||||||||||||    
T  20549704 aaaataagtaacaagaattgttcggacgaaaggacaatccctgtggatacgatactctactta 20549766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 171 - 245
Target Start/End: Complemental strand, 20858784 - 20858710
Alignment:
Q  171 aaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    ||||||||||||  |||||||| |||| |||  ||||||   |||||||||||||||||||||||| ||||||||    
T  20858784 aaaataagtaacaagaattgttcggacaaaaggacaatctccgtggatacgatactctacttatcattttattac 20858710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 171 - 245
Target Start/End: Complemental strand, 28664873 - 28664799
Alignment:
Q  171 aaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    ||||||||||||| |||||||| | || |||  ||| ||| | || |||||||||||||||||||||||||||||    
T  28664873 aaaataagtaacgagaattgttcgcacgaaaggacagtccctatgaatacgatactctacttatcactttattac 28664799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 124
Target Start/End: Original strand, 17314990 - 17315066
Alignment:
Q  49 gattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataactt-gctctgttgcaaacagataaaa 124  Q
    |||||||||| || |||||  ||||||||||| |||||||||| ||| |||||| ||||| ||||||| ||||||||    
T  17314990 gattcaaagaatcttaaccgctgcttacttttttgcaaccaaaacaggtaacttcgctctattgcaaaaagataaaa 17315066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 155
Target Start/End: Original strand, 17474493 - 17474631
Alignment:
Q  17 tgttatttaattccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgctctgttgcaaac 116  Q
    ||||||||||||||||| |||| ||| |||| ||||  |||| ||||||||  |||| || ||| |||||||||| |||||||| |  | ||||||||||    
T  17474493 tgttatttaattccaac-aaatgaattgggg-gattataagaatcctaaccgctgctaacatttttgcaaccaaaacagataacctattatgttgcaaac 17474590  T
Q  117 agataaaatttgc-aatct-ttaacccttaactcttttatt 155  Q
    ||| |||| |||| ||||| |||||||| |||| |||||||    
T  17474591 agaaaaaaattgcaaatctcttaaccctcaactgttttatt 17474631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 224
Target Start/End: Complemental strand, 17635379 - 17635325
Alignment:
Q  170 taaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgata 224  Q
    ||||||||||||| |||||||||||||| || |||||||  ||||||||| ||||    
T  17635379 taaaataagtaacacgaattgtttggacgaaccaacaatttatgtggatatgata 17635325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 245
Target Start/End: Complemental strand, 19051647 - 19051574
Alignment:
Q  171 aaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    ||||||||||||  ||||||||| ||   ||||||||||| || |||||||| |||| |||||||||||||||||    
T  19051647 aaaataagtaacaagaattgtttagatggaacaacaatccctg-ggatacgacactcaacttatcactttattac 19051574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 242
Target Start/End: Complemental strand, 23265252 - 23265182
Alignment:
Q  172 aaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttat 242  Q
    |||||||||||| |||||||||||   |||  | ||||||| ||||||||||| | |||||||||||||||    
T  23265252 aaataagtaacgtgaattgtttggttgaaatgaaaatccatatggatacgatattttacttatcactttat 23265182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 245
Target Start/End: Complemental strand, 26502184 - 26502144
Alignment:
Q  204 acaatccatgtggatacgatactctacttatcactttattac 245  Q
    ||||||||||||||||||| |||| |||||||||||||||||    
T  26502184 acaatccatgtggatacgacactc-acttatcactttattac 26502144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 107; Significance: 9e-54; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 13 - 234
Target Start/End: Original strand, 2660 - 2881
Alignment:
Q  13 tgaatgttatttaattccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgctctgttgc 112  Q
    ||||||||||||||||||||| ||||||||||||  ||||| ||||||| ||||| ||| |||||||||| |||| ||| ||  ||||||||| ||||||    
T  2660 tgaatgttatttaattccaacaaaataaatagggaggattcgaagagtcttaaccgttgtttacttttctacaac-aaaccatgtaacttgctatgttgc 2758  T
Q  113 aaacagataaaatttgcaatctttaacccttaactcttttatt-ttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaatcca 211  Q
    ||| | |||||| ||||||||| |||||||||||||||||||| |||||| |||||   |||||||||||| |||||||||||||| |||| ||||| ||    
T  2759 aaataaataaaaattgcaatctctaacccttaactcttttattattatattgtcaaaacaaaataagtaacacgaattgtttggacgaaacgacaattca 2858  T
Q  212 tgtggatacgatactctacttat 234  Q
    |||||||||||||||| ||||||    
T  2859 tgtggatacgatactcaacttat 2881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 106; Significance: 4e-53; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 14 - 245
Target Start/End: Original strand, 168141 - 168372
Alignment:
Q  14 gaatgttatttaat-tccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaag-cagataacttgctctgttg 111  Q
    |||||||||||| | |||||| | ||||| ||||| ||||||||||||||||||| ||| || ||||||| ||||||||  ||  |||||||||||||||    
T  168141 gaatgttatttattatccaacaatataaacagggg-gattcaaagagtcctaaccgttgtttccttttctacaaccaaaaacaagtaacttgctctgttg 168239  T
Q  112 caaacagataaaatttgcaatctttaacccttaactcttttattttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaatcca 211  Q
    ||||||||||||| ||| ||||| |||||||||  |||||||||||||||||||||||||||||||||||| |||  | ||| ||  |||| |||||||     
T  168240 caaacagataaaaattgaaatctctaacccttatgtcttttattttatatcgtcaacttaaaataagtaacacgagctatttagaagaaacgacaatcc- 168338  T
Q  212 tgtggatacgatactctacttatcactttattac 245  Q
    ||||||||||||||||||||||||||||||||||    
T  168339 tgtggatacgatactctacttatcactttattac 168372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 100; Significance: 1e-49; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 12 - 245
Target Start/End: Original strand, 43067 - 43301
Alignment:
Q  12 atgaatgttatttaat-tccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaag-cagataacttgctctgt 109  Q
    |||||||||||| | | |||||| | ||||| ||||| ||||||||||||| |||||  |  ||  ||||||| |||||||  ||| |||||||||||||    
T  43067 atgaatgttattaattatccaacaatataaacagggg-gattcaaagagtcttaaccgctattttgttttctgtaaccaaaaacaggtaacttgctctgt 43165  T
Q  110 tgcaaacagataaaatttgcaatctttaacccttaactcttttattttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaatc 209  Q
    ||||||||||||||| ||||||||| ||||||||| |||||||||||||||||||||| |||||||||||||| |||  ||||| ||| |||| ||||||    
T  43166 tgcaaacagataaaaattgcaatctctaacccttatctcttttattttatatcgtcaatttaaaataagtaacacgagctgtttagacgaaacgacaatc 43265  T
Q  210 catgtggatacgatactctacttatcactttattac 245  Q
    | |||||||||| |||| ||||||||||||||||||    
T  43266 cttgtggatacgttactttacttatcactttattac 43301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 93; Significance: 2e-45; HSPs: 3)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 12 - 245
Target Start/End: Complemental strand, 55120 - 54885
Alignment:
Q  12 atgaatgttatttaat-tccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaag-cagataacttgctctgt 109  Q
    |||||||||||||| | |||||  | ||||||||||| |||||||||||||||||||| || || ||||| ||||||||||  ||| ||||||||| |||    
T  55120 atgaatgttatttattatccaataatataaatagggg-gattcaaagagtcctaaccagtgttttcttttgtgcaaccaaaaacaggtaacttgctatgt 55022  T
Q  110 tgcaaacagataaaatttgcaatctttaacccttaactcttttattttatatcgtcaacttaaaataagtaacgcgaattgtttggac-caaacaacaat 208  Q
     ||||||| |||||| ||| ||||| ||||||||| || |||||||||||||||| ||||||||||||||||||| |  | ||| |||  |||| |||||    
T  55021 cgcaaacaaataaaaattggaatctctaacccttatcttttttattttatatcgttaacttaaaataagtaacgcaagctatttagacgaaaacgacaat 54922  T
Q  209 ccatgtggatacgatactctacttatcactttattac 245  Q
    || ||||||||| ||||||||||||||||||||||||    
T  54921 ccctgtggatacaatactctacttatcactttattac 54885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 245
Target Start/End: Original strand, 48173 - 48264
Alignment:
Q  154 ttttatatcgtcaactta---aaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    ||||| ||||||||||||   |||||||||| | ||||||||||||| ||   |||||||||   ||||||||||||||||||||||||||||||    
T  48173 ttttacatcgtcaacttacaaaaataagtaa-gagaattgtttggacgaattgacaatccata--gatacgatactctacttatcactttattac 48264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 245
Target Start/End: Complemental strand, 234440 - 234366
Alignment:
Q  171 aaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    ||||||||| ||  |||||||| |||| |||  ||||||  ||||| ||||||||| ||||||||||||||||||    
T  234440 aaaataagtgacaagaattgttcggacgaaaggacaatctctgtgggtacgatactatacttatcactttattac 234366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 17 - 245
Target Start/End: Original strand, 35839 - 36069
Alignment:
Q  17 tgttatttaat-tccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaag-cagataacttgctctgttgcaa 114  Q
    ||||||||||| |||||| | ||||||||||| ||||| |||| ||||||||  ||||||||||||||||||||||  ||| |||||| || |||| |||    
T  35839 tgttatttaatatccaacaatataaatagggg-gattctaagaatcctaaccgctgcttacttttctgcaaccaaaatcaggtaactttctttgttccaa 35937  T
Q  115 acagataaaatttgcaa-tctttaaccctt-aactcttttattttatatcgtcaa-cttaaaataagtaacgcgaattgtttggaccaaacaacaatcca 211  Q
    | |||||||| |||||| ||| |||||||| ||||||| ||||||||  |||||| ||||||||||||||| |||||| ||||||  |||| ||||| ||    
T  35938 atagataaaaattgcaaatctctaaccctttaactcttatattttat--cgtcaaacttaaaataagtaacacgaattatttggatgaaacgacaattca 36035  T
Q  212 tgtggatacgatactctacttatcactttattac 245  Q
    ||||||||||||||||||||||||||||||||||    
T  36036 tgtggatacgatactctacttatcactttattac 36069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 70 - 245
Target Start/End: Complemental strand, 35738 - 35562
Alignment:
Q  70 tgcttacttttctgcaaccaaagcagataacttgctctgttgcaaacagataaaatttgcaa-tctttaaccctt-aactcttttattttatatcgtcaa 167  Q
    ||||||| |||||||||||||| ||| ||||||||| ||||||| ||| |||||| |||||| ||| |||||||| ||||||||||||||||  | ||||    
T  35738 tgcttacctttctgcaaccaaaacaggtaacttgctttgttgcagacaaataaaaattgcaaatctctaaccctttaactcttttattttat--catcaa 35641  T
Q  168 -cttaaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
     |||||||||||||| ||||||||||||||| |||| | ||||||||||||||| |||||||| |||||||||||||||    
T  35640 acttaaaataagtaaggcgaattgtttggacgaaacgaaaatccatgtggatacaatactctatttatcactttattac 35562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0838 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0838
Description:

Target: scaffold0838; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 55 - 244
Target Start/End: Complemental strand, 2583 - 2396
Alignment:
Q  55 aagagtcctaaccattgcttactttt-ctgcaaccaaagcagataacttgctctgttgcaaacagataaaatttgcaatctttaacccttaactctttta 153  Q
    |||||||||||||  || |||||||| || |||| ||| ||| |||||| ||||||||||||||||||||  || |||||| |||||||| |||||||||    
T  2583 aagagtcctaaccgctgtttactttttctacaacgaaa-caggtaactttctctgttgcaaacagataaa--ttacaatctctaacccttcactctttta 2487  T
Q  154 ttttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttatta 244  Q
    ||||| || ||||| | ||||||| |||||| |||||||||||  |||   ||||||||||||||||||||||||||||||| ||||||||    
T  2486 ttttaaattgtcaaatcaaaataattaacgctaattgtttggaagaaatgtcaatccatgtggatacgatactctacttatccctttatta 2396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0832 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0832
Description:

Target: scaffold0832; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 55 - 244
Target Start/End: Complemental strand, 2614 - 2427
Alignment:
Q  55 aagagtcctaaccattgcttactttt-ctgcaaccaaagcagataacttgctctgttgcaaacagataaaatttgcaatctttaacccttaactctttta 153  Q
    |||||||||||||  || |||||||| || |||| ||| ||| |||||| ||||||||||||||||||||  || |||||| |||||||| |||||||||    
T  2614 aagagtcctaaccgctgtttactttttctacaacgaaa-caggtaactttctctgttgcaaacagataaa--ttacaatctctaacccttcactctttta 2518  T
Q  154 ttttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttatta 244  Q
    ||||| || ||||| | ||||||| |||||| |||||||||||  |||   ||||||||||||||||||||||||||||||| ||||||||    
T  2517 ttttaaattgtcaaatcaaaataattaacgctaattgtttggaagaaatgtcaatccatgtggatacgatactctacttatccctttatta 2427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 12 - 245
Target Start/End: Original strand, 89696 - 89927
Alignment:
Q  12 atgaatgttatttaattccaacgaaataaataggggagattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataacttgctctgttg 111  Q
    |||||||||||||||||||||| |||||||| |||| |||| ||||||||||||||  |||||| ||||||||||||||| ||| ||||||| || ||||    
T  89696 atgaatgttatttaattccaac-aaataaat-ggggtgatttaaagagtcctaaccgctgcttatttttctgcaaccaaaacaggtaacttgttcggttg 89793  T
Q  112 caaacagata-aaatttgcaatctttaacccttaactcttttattttatatcgtcaacttaaaataagtaacgcgaattgtttggaccaaacaacaatcc 210  Q
    |||||||||| |||||   ||||| |||||||||||||||||  || |  |       |||||||||||||||||| |||||| ||| |||| ||||| |    
T  89794 caaacagatagaaattaaaaatctctaacccttaactctttttattcactttactgttttaaaataagtaacgcgagttgtttagacgaaacgacaatac 89893  T
Q  211 atgtggatacgatactctacttatcactttattac 245  Q
     ||| |||| ||||||||||||| |||||||||||    
T  89894 ttgtagatatgatactctactta-cactttattac 89927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0351 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 49 - 232
Target Start/End: Original strand, 151 - 338
Alignment:
Q  49 gattcaaagagtcctaaccattgcttacttttctgcaaccaaag-cagataacttgctctgttgcaaacagataaaatttgcaatctttaacccttaact 147  Q
    ||||||||||||||||||| ||| || ||||||||||||||||  | ||||| ||| | |||||||||||||||||| ||||||||| ||||| |||  |    
T  151 gattcaaagagtcctaaccgttgtttccttttctgcaaccaaaaaccgataatttggtttgttgcaaacagataaaaattgcaatctctaaccattattt 250  T
Q  148 cttttattttatatcgtcaac---ttaaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctactt 232  Q
    ||||||||||||| ||| |||   |||||||||||||| | |||||| ||||  |||| |||||| ||||  ||| ||||||||||||    
T  251 cttttattttataccgttaactaattaaaataagtaacacaaattgtatggatgaaacgacaatcgatgtaaataggatactctactt 338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0351; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 49 - 169
Target Start/End: Original strand, 5641 - 5759
Alignment:
Q  49 gattcaaagagtcctaaccattgcttacttttctgcaaccaaag-cagataacttgctctgttgcaaacagataaaatttgcaatctttaacccttaact 147  Q
    |||||||||| |||||||| ||| || ||||||| ||||||||  ||| ||| ||| ||| |||||||||||||||| ||||||||| |||   ||  ||    
T  5641 gattcaaagaatcctaaccgttgtttccttttctacaaccaaaaacaggtaatttggtctattgcaaacagataaaaattgcaatctctaa---ttgtct 5737  T
Q  148 cttttattttatatcgtcaact 169  Q
    ||||||||||||||| ||||||    
T  5738 cttttattttatatcatcaact 5759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0638 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0638
Description:

Target: scaffold0638; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 72 - 245
Target Start/End: Original strand, 722 - 897
Alignment:
Q  72 cttacttttctgcaaccaaag-cagataa-cttgctctgttgcaaacagataaaatttgcaatctttaacccttaactcttttattttatatcgtcaa-c 168  Q
    ||||||||||||||||||||  ||| ||| ||| ||||||||||||||||||||| |||||||||||    || ||| ||| | |||||||||||||| |    
T  722 cttacttttctgcaaccaaaaacaggtaaactttctctgttgcaaacagataaaaattgcaatcttt----ctaaacccttatcttttatatcgtcaaac 817  T
Q  169 tta---aaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    |||   |||||||||||| | ||||||||||| |||| ||||||    ||||||||||||||||||||||||||||||||    
T  818 ttataaaaataagtaacgtggattgtttggacgaaacgacaatctcaatggatacgatactctacttatcactttattac 897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 49 - 182
Target Start/End: Complemental strand, 114710 - 114573
Alignment:
Q  49 gattcaaagagtcctaaccattgcttacttttctgcaaccaaag-cagataacttgctctgttgcaaacagataaaatttgcaatctttaacccttaact 147  Q
    ||||||||||||||||||| ||| || ||||||||||||||||  ||| ||| ||| |||||||||||||||||||| || |||||| ||||| ||  ||    
T  114710 gattcaaagagtcctaaccgttgtttccttttctgcaaccaaaaacaggtaatttggtctgttgcaaacagataaaaattacaatctctaaccattgtct 114611  T
Q  148 cttttattttatatcgtcaac---ttaaaataagtaac 182  Q
    ||||||||||||||| |||||   ||||||||||||||    
T  114610 cttttattttatatcatcaactaattaaaataagtaac 114573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 172 - 245
Target Start/End: Complemental strand, 6385 - 6312
Alignment:
Q  172 aaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||||    
T  6385 aaataagtaatgcgaattgtttggacgaaacaacaatccatgtggatacgatactttacttatgactttattac 6312  T

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Target: scaffold0001 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 98 - 245
Target Start/End: Complemental strand, 69251 - 69106
Alignment:
Q  98 aacttgctctgttgcaaacagataaaatttgcaat-ctttaacccttaactcttttattttatatcgtcaacttaaaataagtaacgcgaattgtttgga 196  Q
    ||||| ||||||||||||||||||||| ||||||| || ||||||||| ||| ||||||  |||| ||||||| |||||||| || || |||||||||||    
T  69251 aactttctctgttgcaaacagataaaaattgcaattctataaccctta-ctcgtttatt--atattgtcaactaaaaataagcaatgcaaattgtttgga 69155  T
Q  197 ccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
      ||   ||||||| |||||||||||| ||| |||||||||||||||||    
T  69154 gaaagtgacaatccttgtggatacgattctcaacttatcactttattac 69106  T

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Target: scaffold0001; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 185 - 244
Target Start/End: Complemental strand, 81571 - 81513
Alignment:
Q  185 gaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttatta 244  Q
    ||||| ||| ||| |||| ||||||||||||||||| |||| ||||||||||||||||||    
T  81571 gaattattttgacgaaaccacaatccatgtggatacaatac-ctacttatcactttatta 81513  T

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Target: scaffold0016 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 171 - 245
Target Start/End: Complemental strand, 3630 - 3556
Alignment:
Q  171 aaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    ||||||||||||  |||||||| |||| |||  ||||||||||||||||||||||||||||||||||||||||||    
T  3630 aaaataagtaacaagaattgttcggacgaaaggacaatccatgtggatacgatactctacttatcactttattac 3556  T

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Target: scaffold0035 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 171 - 245
Target Start/End: Complemental strand, 70012 - 69938
Alignment:
Q  171 aaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    ||||||||||||| ||||||||||||| |||| ||||||| |||| |||||||||| ||||| ||||||||||||    
T  70012 aaaataagtaacgagaattgtttggacgaaacgacaatccttgtgtatacgatactttacttgtcactttattac 69938  T

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Target: scaffold1869 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold1869
Description:

Target: scaffold1869; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 154 - 245
Target Start/End: Original strand, 369 - 463
Alignment:
Q  154 ttttatatcgtcaactta---aaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    ||||||||||||||||||   |||||  ||||| ||||||||||||| |||  ||||||| ||| ||||||||||||||| ||||||||||||||    
T  369 ttttatatcgtcaacttatataaatatctaacgagaattgtttggacgaaatgacaatccctgttgatacgatactctacgtatcactttattac 463  T

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Target: scaffold0019 (Bit Score: 45; Significance: 9e-17; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 172 - 244
Target Start/End: Complemental strand, 11338 - 11266
Alignment:
Q  172 aaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttatta 244  Q
    |||||||||| || ||||||||||   |||||||||||||||| |||| ||||||||||||||||||||||||    
T  11338 aaataagtaatgcaaattgtttggttgaaacaacaatccatgtagatatgatactctacttatcactttatta 11266  T

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Target: scaffold0019; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 35 - 245
Target Start/End: Original strand, 181568 - 181779
Alignment:
Q  35 aaataaataggggagattcaaagagtcct--aaccattgcttacttttctgcaaccaaag-cagataacttgctctgttgcaaacagataaaatttgcaa 131  Q
    ||||||||||||| |||||||||| ||||  ||||| || |||| |||||||| | |||  |||  |||||||||||||||||||| |||||  ||||||    
T  181568 aaataaataggggtgattcaaagaatcctctaaccactg-ttacatttctgcaccaaaaaacaggcaacttgctctgttgcaaacaaataaatattgcaa 181666  T
Q  132 -tct-ttaacccttaactcttttattttatatcgtcaa-cttaaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactct 228  Q
     | | |||||| ||| || |||||||| ||  |||||| | ||||||||||||| ||| || ||||||| |||| |||||| |||||||||||||||||     
T  181667 atatcttaacctttatct-ttttatttcat--cgtcaaacataaaataagtaacacgacttatttggacaaaacgacaatctatgtggatacgatactc- 181762  T
Q  229 acttatcactttattac 245  Q
    | |||||||||||||||    
T  181763 atttatcactttattac 181779  T

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Target: scaffold0671 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 49 - 131
Target Start/End: Complemental strand, 652 - 569
Alignment:
Q  49 gattcaaagagtcctaaccattgcttacttttctgcaaccaaagcagataactt-gctctgttgcaaacagataaaatttgcaa 131  Q
    ||||| |||| ||||||||  |||||||||||||||||||||| ||| ||| || |||||||||||||||||||||| ||||||    
T  652 gattcgaagaatcctaaccgctgcttacttttctgcaaccaaaacaggtaaattcgctctgttgcaaacagataaaaattgcaa 569  T

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Target: scaffold0671; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 230
Target Start/End: Complemental strand, 541 - 482
Alignment:
Q  171 aaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctac 230  Q
    ||||||| ||||  |||||||| |||| |||  |||||||||||||||||||||||||||    
T  541 aaaataattaacaagaattgttcggacgaaaggacaatccatgtggatacgatactctac 482  T

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Target: scaffold0056 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 3)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 55 - 131
Target Start/End: Complemental strand, 25190 - 25113
Alignment:
Q  55 aagagtcctaaccattgcttacttttctgcaaccaaagcagat-aacttgctctgttgcaaacagataaaatttgcaa 131  Q
    |||| |||||||| ||||||||||||||||||||||| ||| | |||||||||||||||||| ||| |||| ||||||    
T  25190 aagaatcctaaccgttgcttacttttctgcaaccaaaacaggtaaacttgctctgttgcaaatagagaaaaattgcaa 25113  T

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Target: scaffold0056; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 171 - 245
Target Start/End: Complemental strand, 21375 - 21301
Alignment:
Q  171 aaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    |||||| |||||  |||||||| |||| |||  ||||||| |||||||| |||||||||||||||||||||||||    
T  21375 aaaatatgtaacaagaattgttcggacgaaaggacaatccctgtggatatgatactctacttatcactttattac 21301  T

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Target: scaffold0056; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 131
Target Start/End: Complemental strand, 21463 - 21403
Alignment:
Q  72 cttacttttctgcaaccaaagcagataa-cttgctctgttgcaaacagataaaatttgcaa 131  Q
    |||||||||||| ||||||| ||| ||| ||| |||||||||||||| |||||| ||||||    
T  21463 cttacttttctgaaaccaaaacaggtaaacttcctctgttgcaaacaaataaaaattgcaa 21403  T

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Target: scaffold0034 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 171 - 245
Target Start/End: Complemental strand, 76517 - 76442
Alignment:
Q  171 aaaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctactta-tcactttattac 245  Q
    ||||||||||||  |||||||| |||| ||| |||||||| |||||||| ||||||||||||| | ||||||||||    
T  76517 aaaataagtaacaagaattgttcggacgaaagaacaatccctgtggatatgatactctacttactaactttattac 76442  T

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Target: scaffold0128 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 172 - 242
Target Start/End: Original strand, 592 - 662
Alignment:
Q  172 aaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttat 242  Q
    |||||||||||| ||||| ||| ||| |||| | |||| |||||||||| ||||||||||| |||||||||    
T  592 aaataagtaacgtgaattatttagacaaaactagaatcaatgtggatacaatactctacttttcactttat 662  T

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Target: scaffold0653 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0653
Description:

Target: scaffold0653; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 233
Target Start/End: Original strand, 4484 - 4545
Alignment:
Q  172 aaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctactta 233  Q
    ||||||||||| ||||||||||  || |||  ||||||||||||||||||||||||| ||||    
T  4484 aaataagtaacacgaattgtttaaacgaaatgacaatccatgtggatacgatactctgctta 4545  T

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Target: scaffold0136 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 204 - 245
Target Start/End: Original strand, 15498 - 15539
Alignment:
Q  204 acaatccatgtggatacgatactctacttatcactttattac 245  Q
    ||||||||||||||||||||||||||| ||| ||||||||||    
T  15498 acaatccatgtggatacgatactctacatattactttattac 15539  T

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Target: scaffold0090 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 184 - 245
Target Start/End: Original strand, 7425 - 7486
Alignment:
Q  184 cgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    |||||||||| |||||||| ||||| | |||  |||| ||||||||||||||||||||||||    
T  7425 cgaattgtttagaccaaacgacaattcttgtaaatacaatactctacttatcactttattac 7486  T

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Target: scaffold0672 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0672
Description:

Target: scaffold0672; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 245
Target Start/End: Complemental strand, 1819 - 1759
Alignment:
Q  185 gaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    |||||||||  || |||| ||||| | ||||||||||||||||||||||||||||| ||||    
T  1819 gaattgtttacacaaaacgacaattcctgtggatacgatactctacttatcacttttttac 1759  T

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Target: scaffold0263 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 131
Target Start/End: Complemental strand, 15868 - 15785
Alignment:
Q  49 gattcaaagagtcctaaccattgcttacttttctgcaaccaaag-cagataacttgctctgttgcaaacagataaaatttgcaa 131  Q
    ||||| |||| | ||||||  |||||||||||| |||||||||  ||| |||||||||||||||||||  ||||||| ||||||    
T  15868 gattcgaagaatactaaccgctgcttacttttccgcaaccaaaaacaggtaacttgctctgttgcaaattgataaaaattgcaa 15785  T

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Target: scaffold0054 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 136
Target Start/End: Complemental strand, 72181 - 72143
Alignment:
Q  98 aacttgctctgttgcaaacagataaaatttgcaatcttt 136  Q
    ||||||||||||||||||||||||||| |||||| ||||    
T  72181 aacttgctctgttgcaaacagataaaaattgcaagcttt 72143  T

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Target: scaffold0238 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 245
Target Start/End: Complemental strand, 19208 - 19135
Alignment:
Q  172 aaataagtaacgcgaattgtttggaccaaacaacaatccatgtggatacgatactctacttatcactttattac 245  Q
    |||||| ||||||||||||||| ||| | || | ||| |||||| |||||||| | ||||||||| ||||||||    
T  19208 aaataattaacgcgaattgtttagacaacacgataattcatgtgcatacgataatttacttatcattttattac 19135  T

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