View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5242-Insertion-9 (Length: 119)
Name: NF5242-Insertion-9
Description: NF5242
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5242-Insertion-9 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 96; Significance: 2e-47; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 96; E-Value: 2e-47
Query Start/End: Original strand, 5 - 119
Target Start/End: Original strand, 43338072 - 43338187
Alignment:
| Q |
5 |
acaacaataacca-tcaaattagcaagtcgaggatgacgcaatttgccaacaccagaggcttcttcaacaaactgttttggatccggccaagtagctttc |
103 |
Q |
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| T |
43338072 |
acaacaataaccaatcaaattagcaagtcgaggatgacgcaatttgccaacaccagaagcttcttcaacaaactgttttggatccggccaagcagcttta |
43338171 |
T |
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| Q |
104 |
ccgaacttcttcacag |
119 |
Q |
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|||||||||||||||| |
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| T |
43338172 |
ccgaacttcttcacag |
43338187 |
T |
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