View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5243_low_2 (Length: 632)
Name: NF5243_low_2
Description: NF5243
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5243_low_2 |
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Alignment Details
Target: chr7 (Bit Score: 512; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 512; E-Value: 0
Query Start/End: Original strand, 67 - 610
Target Start/End: Original strand, 45328191 - 45328734
Alignment:
| Q |
67 |
ttcaacctaattctcatcctaccttttgcaacatcaactatataatccctagcagtaaacccttctctagcacccatttgaagccctgttaaaatcgtat |
166 |
Q |
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| T |
45328191 |
ttcaacctaattctcatcctaccttttgcaacatcaactatataatccctagcagtaaacccttctctagcacccatttgaagcccggttaaaatcgtat |
45328290 |
T |
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| Q |
167 |
tctcttgcaaatccaaaacaaaattaacaagtccacttaagagtatatctatgaatccaaaacccactaaaacaaaaacacaagcaaagagtttagtcat |
266 |
Q |
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| T |
45328291 |
tctcttgcaaatccaaaacaaaattaacaagtccacttaagagtatatctatgaatccaaaacccactaaaacaaaaacacaagcaaagagtttagtcat |
45328390 |
T |
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| Q |
267 |
tggtgttaaaggagctatgtctccataaccaattgtacacatggtgactatacaaaaataaagagcatcaacaacagggtgagtttcaatgccagagaaa |
366 |
Q |
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| T |
45328391 |
tggtgttaaaggagctatgtctccataaccaattgtacacatggtgactatacaaaaataaagagcatcaacaacagggtgagtttcaatgccagagaaa |
45328490 |
T |
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| Q |
367 |
ttttttgtgttgaaagagtatattatgacaccgacagagaggtatataaggagaagccaaatgccttgtcgaatgatggaattggtttgaggtttgggaa |
466 |
Q |
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| T |
45328491 |
ttttttgtgttgaaagagtatattatgacaccgacagagaggtatataaggagaagccaaatgccttgtcgaatgatggaattggtttgaggtttgggaa |
45328590 |
T |
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| Q |
467 |
gttgaggttggtcattgatgggtttaaggtgtgggagaatgaacatagctggtgctgttttgcagcggctgagnnnnnnnngtttgtgatgagaaaataa |
566 |
Q |
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| T |
45328591 |
gttgaggttggtcattgatgggtttaaggtgtgggagaatgaacatagctggtgctgttttgcagcggctgagttttttttgtttgtgatgagaaaatga |
45328690 |
T |
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| Q |
567 |
ttgttgttgtggagtgaagttgatggattgtatctcagatgatt |
610 |
Q |
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| T |
45328691 |
ttgttgttgtggagtgaagttgatggattgtatctcagatgatt |
45328734 |
T |
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