View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5243_low_22 (Length: 242)
Name: NF5243_low_22
Description: NF5243
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5243_low_22 |
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Alignment Details
Target: chr3 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 4 - 223
Target Start/End: Original strand, 15282382 - 15282601
Alignment:
| Q |
4 |
agtagaatatcttcaataatcaaaataataatatttttaaatatctttgatttcaaatcataaagtacaaaagtctttttaagcaactaacatttactaa |
103 |
Q |
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| T |
15282382 |
agtagaatatattcaataatcaaaataataatatttttaaatatctctgatttcaaatcataaagtacaaaagtctttttaagcaactaacatttactaa |
15282481 |
T |
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| Q |
104 |
cagatattctttcatatataggagtcaaagattgaaaacctagttacattttaatggaccaattatttgtacatcacaatgaaaaggcagctatggtcct |
203 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| |
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| T |
15282482 |
cagatattctttcatatataggagtcaaagattgaaaacctagttacattttaatggaccaactatttgtacatcacaatgaaaaggcagctatgctcct |
15282581 |
T |
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| Q |
204 |
ttacactagtgacatagctt |
223 |
Q |
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|||||| ||||||||||||| |
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| T |
15282582 |
ttacaccagtgacatagctt |
15282601 |
T |
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