View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5244-Insertion-9 (Length: 178)
Name: NF5244-Insertion-9
Description: NF5244
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5244-Insertion-9 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 145; Significance: 1e-76; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 145; E-Value: 1e-76
Query Start/End: Original strand, 30 - 178
Target Start/End: Complemental strand, 4495507 - 4495359
Alignment:
| Q |
30 |
tctaccgactttcaagagaagagtgcaaattaaaactttttcactctacctattcttttccaccgacatgtttagccataatgttctaattttgattaac |
129 |
Q |
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| T |
4495507 |
tctaccgactttcaagagaagagtgcaaattaaaactttttcactctacctattcttttccaccgacaagtttagccataatgttctaattttgattaac |
4495408 |
T |
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| Q |
130 |
cttcaatattaactcaaagttgttcgatttttcttttctctcctgctag |
178 |
Q |
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| T |
4495407 |
cttcaatattaactcaaagttgttcgatttttcttttctctcctgctag |
4495359 |
T |
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