View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5245-Insertion-14 (Length: 265)
Name: NF5245-Insertion-14
Description: NF5245
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5245-Insertion-14 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 8 - 265
Target Start/End: Complemental strand, 2943551 - 2943294
Alignment:
| Q |
8 |
tgttcaataaaaattaaatacctaaacttgaagatcaatgaaactatacaactggaatggtnnnnnnncaatatgctgaagttgaccaaatggttcagca |
107 |
Q |
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| T |
2943551 |
tgttcaataaaaattaaatacctaaacttgaagatcaatgaaactatacaactggaatggtaaaaaaacaatatgctgaagttgaccaaatggttcagca |
2943452 |
T |
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| Q |
108 |
tagtacctccatcaacgtgatctctttggagcaatcaaactgcaacacaacataaccaaacttgaaacatattctaattaatattgtgtagtgaccttaa |
207 |
Q |
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| T |
2943451 |
tagtacctccatcaacgtgatctctttggagcaatcaaactgcaacacaacataaccaaacttgaaaaatattctaattaatattgtgtagtgaccttaa |
2943352 |
T |
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| Q |
208 |
ttaaatataagtatctggacatgcatttgttattttccttgccatgtgatgcagtcaa |
265 |
Q |
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| T |
2943351 |
ttaaatataagtatctggacatgcatttgttattttccttgccatgtgatgcagtcaa |
2943294 |
T |
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