View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5245-Insertion-7 (Length: 520)

Name: NF5245-Insertion-7
Description: NF5245
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5245-Insertion-7
NF5245-Insertion-7
[»] chr1 (27 HSPs)
chr1 (8-342)||(24007381-24007715)
chr1 (367-520)||(24007199-24007355)
chr1 (392-495)||(28476733-28476839)
chr1 (407-495)||(38056671-38056762)
chr1 (392-495)||(12710814-12710920)
chr1 (465-520)||(12327717-12327772)
chr1 (411-494)||(22145666-22145752)
chr1 (392-491)||(24719514-24719615)
chr1 (465-520)||(29763606-29763661)
chr1 (469-520)||(50001503-50001554)
chr1 (465-520)||(51336502-51336557)
chr1 (414-495)||(50544841-50544925)
chr1 (465-520)||(46197719-46197774)
chr1 (392-495)||(39061268-39061373)
chr1 (474-520)||(21995638-21995684)
chr1 (392-495)||(20708058-20708163)
chr1 (407-495)||(8275988-8276079)
chr1 (392-508)||(8306552-8306672)
chr1 (402-495)||(21188033-21188128)
chr1 (434-505)||(17901783-17901857)
chr1 (392-495)||(34392714-34392821)
chr1 (419-505)||(6834150-6834239)
chr1 (465-495)||(7051921-7051951)
chr1 (445-494)||(19676711-19676763)
chr1 (445-494)||(21046049-21046101)
chr1 (465-495)||(24723350-24723380)
chr1 (367-400)||(11946363-11946396)
[»] chr8 (34 HSPs)
chr8 (367-520)||(12577801-12577957)
chr8 (392-495)||(4380616-4380722)
chr8 (392-494)||(18816295-18816400)
chr8 (392-494)||(21514638-21514743)
chr8 (403-495)||(36732411-36732506)
chr8 (465-520)||(19880845-19880900)
chr8 (465-520)||(23479105-23479160)
chr8 (465-520)||(17158937-17158992)
chr8 (392-508)||(22208216-22208335)
chr8 (395-495)||(21676592-21676693)
chr8 (465-520)||(26454731-26454786)
chr8 (374-423)||(26224469-26224518)
chr8 (392-520)||(41680107-41680237)
chr8 (465-520)||(16198859-16198914)
chr8 (403-495)||(21678845-21678938)
chr8 (479-520)||(22237024-22237065)
chr8 (410-495)||(21676499-21676585)
chr8 (392-495)||(23884117-23884222)
chr8 (392-495)||(21399663-21399770)
chr8 (392-495)||(21794156-21794263)
chr8 (392-495)||(22610266-22610370)
chr8 (421-483)||(18023567-18023632)
chr8 (402-494)||(22258306-22258402)
chr8 (434-490)||(22483775-22483834)
chr8 (465-508)||(20022026-20022069)
chr8 (425-483)||(38184923-38184984)
chr8 (465-495)||(5761556-5761586)
chr8 (465-495)||(17906848-17906878)
chr8 (465-495)||(22532131-22532161)
chr8 (465-495)||(22536816-22536846)
chr8 (392-495)||(22708323-22708428)
chr8 (442-508)||(36305995-36306063)
chr8 (392-447)||(21697509-21697565)
chr8 (419-495)||(22483912-22483990)
[»] scaffold0017 (2 HSPs)
scaffold0017 (392-491)||(26674-26776)
scaffold0017 (402-495)||(23571-23666)
[»] chr5 (23 HSPs)
chr5 (392-495)||(18744821-18744927)
chr5 (403-495)||(16063709-16063804)
chr5 (392-494)||(23199207-23199312)
chr5 (403-495)||(6551289-6551384)
chr5 (465-520)||(17011751-17011806)
chr5 (392-495)||(660737-660841)
chr5 (465-520)||(31456983-31457038)
chr5 (465-520)||(10774638-10774693)
chr5 (392-490)||(1627071-1627173)
chr5 (465-520)||(30616637-30616692)
chr5 (474-520)||(21554277-21554323)
chr5 (474-520)||(21556923-21556969)
chr5 (392-452)||(21504087-21504147)
chr5 (465-520)||(29448863-29448918)
chr5 (393-490)||(21398800-21398904)
chr5 (396-495)||(32607315-32607418)
chr5 (445-495)||(21300043-21300096)
chr5 (445-495)||(31622117-31622170)
chr5 (465-495)||(20469175-20469205)
chr5 (465-495)||(21617927-21617957)
chr5 (392-449)||(24068176-24068234)
chr5 (474-520)||(26832653-26832699)
chr5 (465-494)||(266061-266090)
[»] scaffold0505 (1 HSPs)
scaffold0505 (392-494)||(4883-4988)
[»] scaffold0203 (1 HSPs)
scaffold0203 (392-508)||(17926-18045)
[»] chr6 (26 HSPs)
chr6 (392-495)||(15998836-15998942)
chr6 (402-495)||(21683074-21683169)
chr6 (445-520)||(27329955-27330033)
chr6 (445-520)||(27390695-27390773)
chr6 (465-520)||(15173427-15173482)
chr6 (8-93)||(22470016-22470102)
chr6 (407-508)||(19825472-19825576)
chr6 (475-520)||(28103422-28103467)
chr6 (392-495)||(18982518-18982625)
chr6 (465-520)||(15900628-15900683)
chr6 (392-494)||(20410512-20410615)
chr6 (402-457)||(24506155-24506210)
chr6 (392-495)||(1818900-1819005)
chr6 (402-495)||(23658045-23658142)
chr6 (474-520)||(27852238-27852284)
chr6 (474-520)||(20733218-20733264)
chr6 (403-495)||(34140455-34140548)
chr6 (392-495)||(10446163-10446270)
chr6 (392-452)||(18982362-18982422)
chr6 (445-495)||(15890711-15890764)
chr6 (434-505)||(29045260-29045334)
chr6 (403-495)||(34153071-34153164)
chr6 (445-494)||(7827972-7828024)
chr6 (445-494)||(23150287-23150339)
chr6 (392-455)||(25601371-25601432)
chr6 (445-493)||(24267849-24267900)
[»] scaffold1186 (1 HSPs)
scaffold1186 (392-495)||(1967-2073)
[»] scaffold0878 (1 HSPs)
scaffold0878 (392-495)||(3421-3527)
[»] scaffold0005 (1 HSPs)
scaffold0005 (392-495)||(186195-186301)
[»] chr4 (27 HSPs)
chr4 (392-495)||(14631082-14631188)
chr4 (392-495)||(25513798-25513904)
chr4 (404-495)||(16296897-16296991)
chr4 (392-495)||(2424386-2424492)
chr4 (465-520)||(15008986-15009041)
chr4 (392-495)||(26446154-26446260)
chr4 (392-455)||(45314124-45314188)
chr4 (465-520)||(14186981-14187036)
chr4 (465-520)||(40620555-40620610)
chr4 (407-495)||(9638972-9639063)
chr4 (392-455)||(26921550-26921614)
chr4 (404-488)||(35660915-35661002)
chr4 (474-520)||(10057693-10057739)
chr4 (392-495)||(15239815-15239922)
chr4 (392-494)||(12424290-12424397)
chr4 (404-495)||(18462983-18463076)
chr4 (392-495)||(14477579-14477684)
chr4 (421-480)||(15747787-15747849)
chr4 (392-494)||(33186850-33186955)
chr4 (445-495)||(15115222-15115275)
chr4 (445-494)||(11425943-11425995)
chr4 (465-495)||(19434558-19434588)
chr4 (465-495)||(21062664-21062694)
chr4 (445-494)||(25091653-25091705)
chr4 (445-494)||(53630474-53630526)
chr4 (465-494)||(35811376-35811405)
chr4 (421-461)||(17142998-17143038)
[»] chr3 (45 HSPs)
chr3 (392-495)||(17208471-17208577)
chr3 (392-495)||(14520393-14520499)
chr3 (392-495)||(29907585-29907692)
chr3 (392-495)||(29948751-29948858)
chr3 (392-495)||(29997905-29998012)
chr3 (465-520)||(36528890-36528945)
chr3 (392-508)||(50350802-50350923)
chr3 (407-508)||(14641534-14641638)
chr3 (445-520)||(24177710-24177788)
chr3 (465-520)||(15446842-15446897)
chr3 (469-519)||(16979939-16979989)
chr3 (474-520)||(37641478-37641524)
chr3 (392-495)||(14152398-14152504)
chr3 (395-495)||(3160626-3160728)
chr3 (465-520)||(3263937-3263992)
chr3 (474-520)||(14967216-14967262)
chr3 (422-495)||(15566721-15566797)
chr3 (474-520)||(52465345-52465391)
chr3 (395-495)||(21845651-21845753)
chr3 (392-495)||(22841278-22841389)
chr3 (474-520)||(52988832-52988878)
chr3 (392-495)||(6003133-6003238)
chr3 (392-494)||(54875474-54875580)
chr3 (402-495)||(48631289-48631384)
chr3 (421-483)||(2247877-2247942)
chr3 (392-494)||(5215594-5215699)
chr3 (482-520)||(31223826-31223864)
chr3 (419-495)||(12917305-12917384)
chr3 (419-487)||(45803338-45803409)
chr3 (392-508)||(6159351-6159471)
chr3 (445-495)||(40807996-40808049)
chr3 (445-495)||(44274418-44274471)
chr3 (465-495)||(5200242-5200272)
chr3 (465-495)||(13185918-13185948)
chr3 (465-495)||(16050950-16050980)
chr3 (445-494)||(17044966-17045018)
chr3 (445-494)||(17047126-17047178)
chr3 (445-494)||(17541434-17541486)
chr3 (465-495)||(19568207-19568237)
chr3 (445-494)||(22306583-22306635)
chr3 (465-495)||(40812856-40812886)
chr3 (403-432)||(13520416-13520445)
chr3 (392-494)||(17669698-17669804)
chr3 (392-482)||(50755266-50755360)
chr3 (466-494)||(41172371-41172399)
[»] scaffold0516 (1 HSPs)
scaffold0516 (392-495)||(5304-5410)
[»] chr7 (42 HSPs)
chr7 (392-495)||(15575648-15575754)
chr7 (396-495)||(43745607-43745709)
chr7 (392-495)||(4690662-4690768)
chr7 (392-495)||(47095399-47095505)
chr7 (403-508)||(19195570-19195677)
chr7 (403-495)||(708428-708523)
chr7 (395-495)||(20252181-20252284)
chr7 (465-520)||(16549979-16550034)
chr7 (465-520)||(16615628-16615683)
chr7 (465-520)||(29052156-29052211)
chr7 (474-520)||(19485947-19485993)
chr7 (422-495)||(8513752-8513828)
chr7 (392-494)||(43276744-43276848)
chr7 (392-495)||(48212726-48212834)
chr7 (474-520)||(30820125-30820171)
chr7 (422-495)||(8488093-8488169)
chr7 (392-495)||(16186860-16186956)
chr7 (479-520)||(46579733-46579774)
chr7 (392-495)||(18874664-18874769)
chr7 (434-495)||(16250221-16250285)
chr7 (392-508)||(58399-58516)
chr7 (435-495)||(38299738-38299801)
chr7 (392-495)||(8930764-8930871)
chr7 (445-508)||(12127149-12127215)
chr7 (442-494)||(19283053-19283108)
chr7 (402-495)||(33060396-33060491)
chr7 (465-508)||(13147458-13147501)
chr7 (392-431)||(15700800-15700839)
chr7 (445-495)||(20586352-20586405)
chr7 (481-520)||(36685120-36685159)
chr7 (402-457)||(42565872-42565927)
chr7 (437-495)||(3287736-3287797)
chr7 (465-495)||(4071843-4071873)
chr7 (445-494)||(8851159-8851211)
chr7 (445-494)||(12372274-12372326)
chr7 (445-494)||(12465260-12465312)
chr7 (465-495)||(12754611-12754641)
chr7 (407-495)||(21661219-21661309)
chr7 (421-483)||(34958321-34958386)
chr7 (465-495)||(35771440-35771470)
chr7 (465-495)||(48807324-48807354)
chr7 (465-494)||(16078353-16078382)
[»] chr2 (28 HSPs)
chr2 (392-495)||(21335265-21335371)
chr2 (397-495)||(21315475-21315576)
chr2 (404-520)||(34491214-34491337)
chr2 (392-508)||(21369240-21369359)
chr2 (367-423)||(29601946-29602002)
chr2 (465-520)||(357904-357959)
chr2 (465-520)||(21080943-21080998)
chr2 (392-495)||(23610573-23610679)
chr2 (465-520)||(21915647-21915702)
chr2 (465-520)||(25184212-25184267)
chr2 (445-519)||(40912320-40912397)
chr2 (474-520)||(34858166-34858212)
chr2 (474-520)||(34873228-34873274)
chr2 (392-455)||(28652593-28652657)
chr2 (469-520)||(27484463-27484514)
chr2 (392-457)||(25584302-25584367)
chr2 (402-495)||(20005970-20006065)
chr2 (445-508)||(17307486-17307552)
chr2 (465-508)||(22501994-22502037)
chr2 (465-508)||(22509928-22509971)
chr2 (445-495)||(24516186-24516239)
chr2 (465-495)||(3539860-3539890)
chr2 (445-494)||(5031129-5031181)
chr2 (445-494)||(24780840-24780892)
chr2 (465-495)||(25142227-25142257)
chr2 (465-495)||(27852691-27852721)
chr2 (465-494)||(2523747-2523776)
chr2 (392-457)||(19647181-19647246)
[»] scaffold0676 (1 HSPs)
scaffold0676 (403-495)||(2839-2934)
[»] scaffold0213 (2 HSPs)
scaffold0213 (392-495)||(19154-19260)
scaffold0213 (402-440)||(19118-19156)
[»] scaffold0369 (1 HSPs)
scaffold0369 (392-495)||(15615-15720)
[»] scaffold0231 (1 HSPs)
scaffold0231 (392-495)||(17520-17626)
[»] scaffold0056 (1 HSPs)
scaffold0056 (392-495)||(18222-18328)
[»] scaffold0138 (2 HSPs)
scaffold0138 (465-520)||(21120-21175)
scaffold0138 (465-520)||(34135-34190)
[»] scaffold1256 (1 HSPs)
scaffold1256 (410-495)||(2199-2287)
[»] scaffold0247 (1 HSPs)
scaffold0247 (392-494)||(1023-1128)
[»] scaffold0061 (2 HSPs)
scaffold0061 (409-495)||(14585-14674)
scaffold0061 (409-495)||(23643-23732)
[»] scaffold0220 (2 HSPs)
scaffold0220 (407-495)||(13911-14002)
scaffold0220 (465-495)||(19977-20007)
[»] scaffold0515 (1 HSPs)
scaffold0515 (465-520)||(5052-5107)
[»] scaffold0306 (1 HSPs)
scaffold0306 (465-520)||(5052-5107)
[»] scaffold0125 (1 HSPs)
scaffold0125 (392-495)||(28498-28604)
[»] scaffold0058 (2 HSPs)
scaffold0058 (465-520)||(6391-6446)
scaffold0058 (395-495)||(59655-59757)
[»] scaffold0057 (1 HSPs)
scaffold0057 (465-520)||(69827-69882)
[»] scaffold0853 (1 HSPs)
scaffold0853 (392-494)||(2454-2561)
[»] scaffold0032 (1 HSPs)
scaffold0032 (404-508)||(61834-61940)
[»] scaffold0337 (1 HSPs)
scaffold0337 (402-495)||(3162-3257)
[»] scaffold0007 (4 HSPs)
scaffold0007 (392-495)||(16418-16525)
scaffold0007 (417-495)||(18700-18781)
scaffold0007 (392-452)||(16619-16679)
scaffold0007 (392-452)||(18902-18962)
[»] scaffold0462 (3 HSPs)
scaffold0462 (465-520)||(11246-11301)
scaffold0462 (392-440)||(1264-1312)
scaffold0462 (392-440)||(6770-6818)
[»] scaffold0436 (1 HSPs)
scaffold0436 (465-520)||(8983-9038)
[»] scaffold0071 (1 HSPs)
scaffold0071 (465-520)||(15295-15350)
[»] scaffold0046 (1 HSPs)
scaffold0046 (465-520)||(21751-21806)
[»] scaffold0034 (1 HSPs)
scaffold0034 (465-520)||(29190-29245)
[»] scaffold0577 (1 HSPs)
scaffold0577 (474-520)||(9091-9137)
[»] scaffold0328 (1 HSPs)
scaffold0328 (407-508)||(18626-18731)
[»] scaffold0139 (2 HSPs)
scaffold0139 (414-516)||(23503-23608)
scaffold0139 (392-495)||(40160-40268)
[»] scaffold0153 (2 HSPs)
scaffold0153 (474-519)||(5329-5374)
scaffold0153 (474-519)||(12349-12394)
[»] scaffold0394 (1 HSPs)
scaffold0394 (402-495)||(7513-7608)
[»] scaffold0092 (1 HSPs)
scaffold0092 (402-495)||(38441-38536)
[»] scaffold0083 (3 HSPs)
scaffold0083 (465-520)||(1960-2015)
scaffold0083 (465-495)||(5044-5074)
scaffold0083 (465-495)||(10754-10784)
[»] scaffold0431 (1 HSPs)
scaffold0431 (392-494)||(5578-5685)
[»] scaffold0031 (1 HSPs)
scaffold0031 (392-495)||(127342-127449)
[»] scaffold0632 (1 HSPs)
scaffold0632 (471-520)||(1194-1243)
[»] scaffold0180 (1 HSPs)
scaffold0180 (421-483)||(10572-10636)
[»] scaffold0819 (1 HSPs)
scaffold0819 (465-520)||(5389-5444)
[»] scaffold0261 (1 HSPs)
scaffold0261 (397-447)||(6468-6519)
[»] scaffold0162 (1 HSPs)
scaffold0162 (392-447)||(23932-23987)
[»] scaffold0104 (2 HSPs)
scaffold0104 (475-520)||(14990-15035)
scaffold0104 (475-520)||(17010-17055)
[»] scaffold1800 (1 HSPs)
scaffold1800 (402-495)||(565-660)
[»] scaffold0594 (1 HSPs)
scaffold0594 (419-495)||(2221-2300)
[»] scaffold0174 (4 HSPs)
scaffold0174 (419-494)||(11590-11668)
scaffold0174 (436-495)||(5445-5507)
scaffold0174 (392-508)||(19802-19922)
scaffold0174 (474-520)||(13669-13715)
[»] scaffold0059 (1 HSPs)
scaffold0059 (402-495)||(49687-49782)
[»] scaffold0298 (1 HSPs)
scaffold0298 (421-483)||(361-426)
[»] scaffold0156 (1 HSPs)
scaffold0156 (465-520)||(16627-16682)
[»] scaffold0021 (2 HSPs)
scaffold0021 (395-495)||(17057-17158)
scaffold0021 (395-495)||(26588-26689)
[»] scaffold1939 (1 HSPs)
scaffold1939 (392-495)||(75-180)
[»] scaffold0098 (1 HSPs)
scaffold0098 (392-495)||(40053-40160)
[»] scaffold0004 (3 HSPs)
scaffold0004 (419-505)||(66061-66150)
scaffold0004 (465-495)||(328287-328317)
scaffold0004 (465-494)||(73110-73139)
[»] scaffold0686 (1 HSPs)
scaffold0686 (479-520)||(1475-1516)
[»] scaffold0379 (1 HSPs)
scaffold0379 (392-494)||(10894-10999)
[»] scaffold1941 (1 HSPs)
scaffold1941 (445-495)||(138-191)
[»] scaffold0207 (1 HSPs)
scaffold0207 (445-495)||(13391-13444)
[»] scaffold0112 (1 HSPs)
scaffold0112 (445-495)||(2889-2942)
[»] scaffold0064 (1 HSPs)
scaffold0064 (465-508)||(58769-58812)
[»] scaffold0037 (1 HSPs)
scaffold0037 (465-496)||(117805-117836)
[»] scaffold1633 (1 HSPs)
scaffold1633 (445-494)||(1205-1257)
[»] scaffold1283 (1 HSPs)
scaffold1283 (445-494)||(468-520)
[»] scaffold0802 (1 HSPs)
scaffold0802 (465-495)||(4708-4738)
[»] scaffold0217 (1 HSPs)
scaffold0217 (392-495)||(28661-28766)
[»] scaffold0036 (1 HSPs)
scaffold0036 (445-494)||(78185-78237)
[»] scaffold0019 (1 HSPs)
scaffold0019 (445-494)||(24131-24183)
[»] scaffold1128 (1 HSPs)
scaffold1128 (367-400)||(420-453)
[»] scaffold0628 (1 HSPs)
scaffold0628 (467-508)||(1044-1085)
[»] scaffold0601 (1 HSPs)
scaffold0601 (465-494)||(196-225)
[»] scaffold0077 (1 HSPs)
scaffold0077 (465-494)||(34362-34391)
[»] scaffold1102 (1 HSPs)
scaffold1102 (422-495)||(1950-2025)
[»] scaffold0086 (1 HSPs)
scaffold0086 (419-495)||(35185-35264)


Alignment Details
Target: chr1 (Bit Score: 304; Significance: 1e-171; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 8 - 342
Target Start/End: Complemental strand, 24007715 - 24007381
Alignment:
Q  8 caaagatggcacttcc-aacatttattacataaagaacacaggttcaagactttattctaaagtaattacaggtctctcgtattagactcctcctagttc 106  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  24007715 caaagatggcacttcccaacatttattacataaagaacacatgttcaagactttattctaaaataattacaggtctctcgtattagactcctcctagttc 24007616  T
Q  107 taaagttaatcatacgtaggacataccaaaacacttaactaattatcccgaacccatgtaacactataaaccaaaacaaaagagaagtaacaattcctca 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24007615 taaagttaatcatacgtaggacataccaaaacacttaactaattatcccgaacccatgtaacactataaaccaaaacaaaagagaagtaacaattcctca 24007516  T
Q  207 ctctccaacaaaatatgacgggtttccagctagtaaaaaggaaattgagaagcaaaattgaaaatattcgcgcagaggcacaatataaagaactcaagac 306  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24007515 ctctccaacaaaatatgacggg-ttccagctagtaaaaaggaaattgagaagcaaaattgaaaatattcgcgcagaggcacaatataaagaactcaagac 24007417  T
Q  307 aaatacatacatcatattatcaaggcgaagatcatg 342  Q
    | |||||| |||||||||||||||||||||||||||    
T  24007416 acatacatgcatcatattatcaaggcgaagatcatg 24007381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 367 - 520
Target Start/End: Complemental strand, 24007355 - 24007199
Alignment:
Q  367 cccttcactacccatatgttcatacaaccctaatctctataacatcaaaactaacaacaactacaaa-gttaaacactttttcagaattatacaaccat- 464  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||  |||||||||||||||||| |||     
T  24007355 cccttcactacccatatgttcataaaaccctaatctctataacatcaaaactaacaacaactacaaaggttaaaccttttttcagaattatacaatcatt 24007256  T
Q  465 -ttagagaaagttagtcccacccttaccttagtattgatgatcggcggtctctctcc 520  Q
     | |||||||| ||||||||||||||||||||||| |||||||| ||||||||||||    
T  24007255 atcagagaaagctagtcccacccttaccttagtatagatgatcgacggtctctctcc 24007199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 392 - 495
Target Start/End: Complemental strand, 28476839 - 28476733
Alignment:
Q  392 aaccctaatctctataacatcaaaactaacaacaactacaaagttaaacactttttcagaattatacaac-cat--ttagagaaagttagtcccaccctt 488  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| |||  |||||||||  |||||||||||||    
T  28476839 aaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaactcattattagagaaatctagtcccaccctt 28476740  T
Q  489 accttag 495  Q
    |||||||    
T  28476739 accttag 28476733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 407 - 495
Target Start/End: Complemental strand, 38056762 - 38056671
Alignment:
Q  407 aacatcaaaactaacaacaactacaaagttaaacactttttcagaattatacaa-ccatt--tagagaaagttagtcccacccttaccttag 495  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||||||||| |||||  ||||||||| ||||||||||||||||||||    
T  38056762 aacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattactagagaaagctagtcccacccttaccttag 38056671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 392 - 495
Target Start/End: Original strand, 12710814 - 12710920
Alignment:
Q  392 aaccctaatctctataacatcaaaactaacaacaactacaaagttaaacactttttcagaattatacaacc--at-ttagagaaagttagtcccaccctt 488  Q
    |||| |||| |||||||||||||||||||||||||||||||  |||||| |||||||||||||||||||||  || |||||||||| |||||||| | ||    
T  12710814 aaccttaatttctataacatcaaaactaacaacaactacaagattaaaccctttttcagaattatacaacccaatattagagaaagctagtcccatcttt 12710913  T
Q  489 accttag 495  Q
    |||||||    
T  12710914 accttag 12710920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 465 - 520
Target Start/End: Complemental strand, 12327772 - 12327717
Alignment:
Q  465 ttagagaaagttagtcccacccttaccttagtattgatgatcggcggtctctctcc 520  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  12327772 ttagagaaagttagtctcacccttaccttagtattgatgatcggcggtctctctcc 12327717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 411 - 494
Target Start/End: Complemental strand, 22145752 - 22145666
Alignment:
Q  411 tcaaaactaacaacaactacaaagttaaacactttttcagaattatacaa-ccat--ttagagaaagttagtcccacccttacctta 494  Q
    ||||| |||||||||||||||| ||||||| |||||||||||||| |||| ||||  ||||||||||||||||||||||||||||||    
T  22145752 tcaaacctaacaacaactacaaggttaaaccctttttcagaattaaacaacccattattagagaaagttagtcccacccttacctta 22145666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 392 - 491
Target Start/End: Complemental strand, 24719615 - 24719514
Alignment:
Q  392 aaccctaatctctataacatcaaaactaacaacaactacaaagttaaacactttttcagaattatacaa-ccat--ttagagaaagttagtcccaccctt 488  Q
    |||| |||| ||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||| ||||  |||||||||| |||| ||||||||    
T  24719615 aaccttaatttctataacatcaaaactaataacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagt-ccaccctt 24719517  T
Q  489 acc 491  Q
    |||    
T  24719516 acc 24719514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 465 - 520
Target Start/End: Complemental strand, 29763661 - 29763606
Alignment:
Q  465 ttagagaaagttagtcccacccttaccttagtattgatgatcggcggtctctctcc 520  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  29763661 ttagagaaagttagtcccacccttaccttagtattgatgatcgtcggtctctctcc 29763606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 469 - 520
Target Start/End: Original strand, 50001503 - 50001554
Alignment:
Q  469 agaaagttagtcccacccttaccttagtattgatgatcggcggtctctctcc 520  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50001503 agaaagttagtcccacccttaccttagtattgatgatcggcggtctctctcc 50001554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 465 - 520
Target Start/End: Original strand, 51336502 - 51336557
Alignment:
Q  465 ttagagaaagttagtcccacccttaccttagtattgatgatcggcggtctctctcc 520  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  51336502 ttagagaaagttagtcccacccttaccttagtattgatgatcggcggtctccctcc 51336557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 414 - 495
Target Start/End: Original strand, 50544841 - 50544925
Alignment:
Q  414 aaactaacaacaactacaaagttaaacactttttcagaattatacaa-ccat--ttagagaaagttagtcccacccttaccttag 495  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||| ||||  |||||||||| ||||| ||||||||||||||    
T  50544841 aaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtctcacccttaccttag 50544925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 465 - 520
Target Start/End: Complemental strand, 46197774 - 46197719
Alignment:
Q  465 ttagagaaagttagtcccacccttaccttagtattgatgatcggcggtctctctcc 520  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  46197774 ttagagaaagttagtcccacccttaccttagtattgatgatcgacagtctctctcc 46197719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 392 - 495
Target Start/End: Original strand, 39061268 - 39061373
Alignment:
Q  392 aaccctaatctctataacatcaaaactaacaacaactacaaagttaaacactttttcagaattatacaaccat--ttagagaaagttagtcccaccctta 489  Q
    ||||||||  |||||||||||||||||| |||||||||||| |||||||  ||||||||||||||| |  |||  ||| |||| ||||||||||| ||||    
T  39061268 aaccctaaattctataacatcaaaactatcaacaactacaaggttaaaccttttttcagaattatatactcatgattacagaaggttagtcccactctta 39061367  T
Q  490 ccttag 495  Q
    ||||||    
T  39061368 ccttag 39061373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 474 - 520
Target Start/End: Complemental strand, 21995684 - 21995638
Alignment:
Q  474 gttagtcccacccttaccttagtattgatgatcggcggtctctctcc 520  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||    
T  21995684 gttagtcccacccttatcttagtattgatgatcggcggtctctctcc 21995638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 392 - 495
Target Start/End: Complemental strand, 20708163 - 20708058
Alignment:
Q  392 aaccctaatctctataacatcaaaactaacaacaactacaaagttaaacactttttcagaattatacaac-cat-ttagagaaagttagtcccaccctta 489  Q
    ||||||||| ||| |||||||| || || |||||||  ||||||||| | |||||||||||||||| ||| ||| ||| |||| ||||||||||||||||    
T  20708163 aaccctaatttctttaacatcacaattatcaacaacatcaaagttaacccctttttcagaattatagaactcatgttaaagaaggttagtcccaccctta 20708064  T
Q  490 ccttag 495  Q
    ||||||    
T  20708063 ccttag 20708058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 407 - 495
Target Start/End: Complemental strand, 8276079 - 8275988
Alignment:
Q  407 aacatcaaaactaacaacaactacaaagttaaacactttttcagaattatacaac-cat--ttagagaaagttagtcccacccttaccttag 495  Q
    |||||||||| || |||||||||||| ||||||| ||||||||||||||||| || |||  ||||| |||| ||||| ||||||||||||||    
T  8276079 aacatcaaaaatatcaacaactacaaggttaaaccctttttcagaattataccactcattattagataaagctagtcacacccttaccttag 8275988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 392 - 508
Target Start/End: Original strand, 8306552 - 8306672
Alignment:
Q  392 aaccctaatctctataacatcaaaactaacaacaactaca--aagttaaacactttttcagaattatacaa-ccat--ttagagaaagttagtcccaccc 486  Q
    ||||||||| |||||||||||||||||||||| ||| |||  | ||||||| | |||| |||||||||||| ||||  |||||||||| ||||||||| |    
T  8306552 aaccctaatttctataacatcaaaactaacaa-aacgacaacatgttaaacccctttttagaattatacaacccattattagagaaagctagtcccactc 8306650  T
Q  487 ttaccttagtattgatgatcgg 508  Q
    |||||||||  | |||||||||    
T  8306651 ttaccttagattagatgatcgg 8306672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 402 - 495
Target Start/End: Complemental strand, 21188128 - 21188033
Alignment:
Q  402 tctataacatcaaaactaacaacaactacaaagttaaacactttttcagaattatacaaccat--ttagagaaagttagtcccacccttaccttag 495  Q
    |||||||||||||||||| ||||||||||||| |||||  |||| ||| ||||||| |  |||  ||| | || ||||||||||||||||||||||    
T  21188128 tctataacatcaaaactatcaacaactacaaaattaaatcctttctcaaaattatatactcatgattaaaaaaggttagtcccacccttaccttag 21188033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 434 - 505
Target Start/End: Complemental strand, 17901857 - 17901783
Alignment:
Q  434 gttaaacactttttcagaattatacaacc-att--tagagaaagttagtcccacccttaccttagtattgatgat 505  Q
    ||||||| ||||||||||||||||||||| |||  ||||||||| ||||| |||||||||||||| || ||||||    
T  17901857 gttaaaccctttttcagaattatacaacccattattagagaaagctagtctcacccttaccttagaatagatgat 17901783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 392 - 495
Target Start/End: Original strand, 34392714 - 34392821
Alignment:
Q  392 aaccctaatctctataacatcaaaactaac--aacaactacaaagttaaacactttttcagaattatacaa-ccat--ttagagaaagttagtcccaccc 486  Q
    ||||||||| ||||||||||||||||||||  |||||| || | ||||||| | |||| ||||| |||||| ||||  |||||||||| ||||| |||||    
T  34392714 aaccctaatttctataacatcaaaactaacaaaacaacaac-atgttaaacccctttttagaatcatacaacccattattagagaaagctagtcacaccc 34392812  T
Q  487 ttaccttag 495  Q
    |||||||||    
T  34392813 ttaccttag 34392821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 419 - 505
Target Start/End: Original strand, 6834150 - 6834239
Alignment:
Q  419 aacaacaactacaaagttaaacactttttcagaattatacaac-cat--ttagagaaagttagtcccacccttaccttagtattgatgat 505  Q
    ||||||||| || | ||||||| |||||||||||||||||||| |||  |||||||||| ||||  ||||||| |||||| || ||||||    
T  6834150 aacaacaacaaccatgttaaaccctttttcagaattatacaactcattattagagaaagctagtatcacccttgccttagaatagatgat 6834239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 465 - 495
Target Start/End: Complemental strand, 7051951 - 7051921
Alignment:
Q  465 ttagagaaagttagtcccacccttaccttag 495  Q
    |||||||||||||||||||||||||||||||    
T  7051951 ttagagaaagttagtcccacccttaccttag 7051921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 445 - 494
Target Start/End: Original strand, 19676711 - 19676763
Alignment:
Q  445 tttcagaattatacaacc---atttagagaaagttagtcccacccttacctta 494  Q
    |||||||||||||||||    | ||||||||||||||||||||||||||||||    
T  19676711 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 19676763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 445 - 494
Target Start/End: Complemental strand, 21046101 - 21046049
Alignment:
Q  445 tttcagaattatacaacc---atttagagaaagttagtcccacccttacctta 494  Q
    |||||||||||||||||    | ||||||||||||||||||||||||||||||    
T  21046101 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 21046049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 465 - 495
Target Start/End: Complemental strand, 24723380 - 24723350
Alignment:
Q  465 ttagagaaagttagtcccacccttaccttag 495  Q
    |||||||||||||||||||||||||||||||    
T  24723380 ttagagaaagttagtcccacccttaccttag 24723350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 400
Target Start/End: Original strand, 11946363 - 11946396
Alignment:
Q  367 cccttcactacccatatgttcatacaaccctaat 400  Q
    |||||||||||||||||| |||||||||||||||    
T  11946363 cccttcactacccatatgatcatacaaccctaat 11946396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 110; Significance: 3e-55; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 367 - 520
Target Start/End: Original strand, 12577801 - 12577957
Alignment:
Q  367 cccttcactacccatatgttcatacaaccctaatctctataacatcaaaactaacaacaactacaaa-gttaaacactttttcagaattatacaaccat- 464  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||| |||||||||||| ||     
T  12577801 cccttcactacctatatgttcatacaaccctaatctctataacatcaaaactaacaacaactataaaggttaaaccctttttcggaattatacaactatt 12577900  T
Q  465 -ttagagaaagttagtcccacccttaccttagtattgatgatcggcggtctctctcc 520  Q
     |||||||||||||||||||||||||||||||||||||||||| || ||||||||||    
T  12577901 attagagaaagttagtcccacccttaccttagtattgatgatcagcagtctctctcc 12577957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 392 - 495
Target Start/End: Complemental strand, 4380722 - 4380616
Alignment:
Q  392 aaccctaatctctataacatcaaaactaacaacaactacaaagttaaacactttttcagaattatacaac---catttagagaaagttagtcccaccctt 488  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||    | ||||||||||||||||||||||||    
T  4380722 aaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacttagaattagagaaagttagtcccaccctt 4380623  T
Q  489 accttag 495  Q
    |||||||    
T  4380622 accttag 4380616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 392 - 494
Target Start/End: Complemental strand, 18816400 - 18816295
Alignment:
Q  392 aaccctaatctctataacatcaaaactaacaacaactacaaagttaaacactttttcagaattatacaacc---atttagagaaagttagtcccaccctt 488  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||    ||||||||||| |||||||||||||    
T  18816400 aaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccatttttagagaaagctagtcccaccctt 18816301  T
Q  489 acctta 494  Q
    ||||||    
T  18816300 acctta 18816295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 392 - 494
Target Start/End: Original strand, 21514638 - 21514743
Alignment:
Q  392 aaccctaatctctataacatcaaaactaacaacaactacaaagttaaacactttttcagaattatacaac-cat--ttagagaaagttagtcccaccctt 488  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||| |||  |||||||||  |||||||||||||    
T  21514638 aaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttaagaattatacaactcattattagagaaatctagtcccaccctt 21514737  T
Q  489 acctta 494  Q
    ||||||    
T  21514738 acctta 21514743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 403 - 495
Target Start/End: Complemental strand, 36732506 - 36732411
Alignment:
Q  403 ctataacatcaaaactaacaacaactacaaagttaaacactttttcagaattatacaa-ccat--ttagagaaagttagtcccacccttaccttag 495  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| ||||  |||||||||| ||||| ||||||||||||||    
T  36732506 ctataacatcaaaactaacaacaactacaaggttaaactctttttcagaattatacaacccattattagagaaagctagtcacacccttaccttag 36732411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 465 - 520
Target Start/End: Original strand, 19880845 - 19880900
Alignment:
Q  465 ttagagaaagttagtcccacccttaccttagtattgatgatcggcggtctctctcc 520  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19880845 ttagagaaagttagtcccacccttaccttagtattgatgatcggcggtctctctcc 19880900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 465 - 520
Target Start/End: Original strand, 23479105 - 23479160
Alignment:
Q  465 ttagagaaagttagtcccacccttaccttagtattgatgatcggcggtctctctcc 520  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23479105 ttagagaaagttagtcccacccttaccttagtattgatgatcggcggtctctctcc 23479160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 465 - 520
Target Start/End: Complemental strand, 17158992 - 17158937
Alignment:
Q  465 ttagagaaagttagtcccacccttaccttagtattgatgatcggcggtctctctcc 520  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  17158992 ttagagaaagttagtcccacccttaccttagtattgatgatcggtggtctctctcc 17158937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 392 - 508
Target Start/End: Original strand, 22208216 - 22208335
Alignment:
Q  392 aaccctaatctctataacatcaaaac-taacaacaactacaaagttaaacactttttcagaattatacaa-ccat--ttagagaaagttagtcccaccct 487  Q
    ||||||||| |||| ||||||||||| ||  ||||||||||| ||||||| ||||||||||||||||||| ||||  |||||||||| ||||||||||||    
T  22208216 aaccctaat-tctacaacatcaaaacctattaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtcccaccct 22208314  T
Q  488 taccttagtattgatgatcgg 508  Q
    ||||||||  | |||||||||    
T  22208315 taccttagattagatgatcgg 22208335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 395 - 495
Target Start/End: Complemental strand, 21676693 - 21676592
Alignment:
Q  395 cctaatctctataacatcaaaactaacaacaactacaaagttaaacactttttcagaattatacaaccat--ttagagaaagttagtcccacccttacct 492  Q
    |||||| ||||||| |||||||||| |||||||||||||||||||| || ||||| ||||||| | ||||  |||||| ||| |||||||||||||||||    
T  21676693 cctaatttctataatatcaaaactatcaacaactacaaagttaaaccctatttcataattataaacccattattagag-aagctagtcccacccttacct 21676595  T
Q  493 tag 495  Q
    |||    
T  21676594 tag 21676592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 465 - 520
Target Start/End: Original strand, 26454731 - 26454786
Alignment:
Q  465 ttagagaaagttagtcccacccttaccttagtattgatgatcggcggtctctctcc 520  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  26454731 ttagagaaagttagtcccacccttaccttagtattgatgatcggcgatctttctcc 26454786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 374 - 423
Target Start/End: Original strand, 26224469 - 26224518
Alignment:
Q  374 ctacccatatgttcatacaaccctaatctctataacatcaaaactaacaa 423  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  26224469 ctacccatatgttcatacaatcctaatctctataacatcaaaactaacaa 26224518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 392 - 520
Target Start/End: Complemental strand, 41680237 - 41680107
Alignment:
Q  392 aaccctaatctctataacatcaaaac-taacaacaactacaaagttaaacactttttcagaattatacaaccat--ttagagaaagttagtcccaccctt 488  Q
    ||||||||| |||| ||||||||||| ||  ||||||||||| ||||||| |||| |||| |||| | |   ||  ||| |||| |||||||||||| ||    
T  41680237 aaccctaat-tctacaacatcaaaacctattaacaactacaaggttaaaccctttatcaggattacatacttatgattaaagaaggttagtcccaccttt 41680139  T
Q  489 accttagtattgatgatcggcggtctctctcc 520  Q
    ||||||||||||||||||||||||||||||||    
T  41680138 accttagtattgatgatcggcggtctctctcc 41680107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 465 - 520
Target Start/End: Original strand, 16198859 - 16198914
Alignment:
Q  465 ttagagaaagttagtcccacccttaccttagtattgatgatcggcggtctctctcc 520  Q
    ||||||||||||||||||||  |||||||||||||||||||||| |||||||||||    
T  16198859 ttagagaaagttagtcccacttttaccttagtattgatgatcggtggtctctctcc 16198914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 403 - 495
Target Start/End: Complemental strand, 21678938 - 21678845
Alignment:
Q  403 ctataacatcaaaactaacaacaactacaaagttaaacactttttcagaattatacaaccat--ttagagaaagttagtcccacccttaccttag 495  Q
    |||||| |||||||||| |||||||||||||||||||| || ||||| ||||||| | ||||  |||||| ||| ||||||||||||||||||||    
T  21678938 ctataatatcaaaactatcaacaactacaaagttaaaccctatttcataattataaacccattattagag-aagctagtcccacccttaccttag 21678845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 479 - 520
Target Start/End: Complemental strand, 22237065 - 22237024
Alignment:
Q  479 tcccacccttaccttagtattgatgatcggcggtctctctcc 520  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  22237065 tcccacccttaccttagtattgatgatcggcggtctctctcc 22237024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 410 - 495
Target Start/End: Complemental strand, 21676585 - 21676499
Alignment:
Q  410 atcaaaactaacaacaactacaaagttaaacactttttcagaattatacaaccat--ttagagaaagttagtcccacccttaccttag 495  Q
    |||||||||| |||||||||||||||||||| || ||||| ||||||| | ||||  |||||| ||| ||||||||||||||||||||    
T  21676585 atcaaaactatcaacaactacaaagttaaaccctatttcataattataaacccattattagag-aagctagtcccacccttaccttag 21676499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 392 - 495
Target Start/End: Original strand, 23884117 - 23884222
Alignment:
Q  392 aaccctaatctctataacatcaaaactaacaaca--actacaaagttaaacactttttcagaattatacaacc-atttagagaaagttagtcccaccctt 488  Q
    ||||||||| |||||||||||||||||||||| |  || |||  ||||||| | |||| ||||| |||||||| |||||||||||| ||||||| |||||    
T  23884117 aaccctaatttctataacatcaaaactaacaaaagaacaacat-gttaaacccctttttagaatcatacaacccatttagagaaagctagtcccgccctt 23884215  T
Q  489 accttag 495  Q
    |||||||    
T  23884216 accttag 23884222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 392 - 495
Target Start/End: Original strand, 21399663 - 21399770
Alignment:
Q  392 aaccctaatctctataacatcaaaactaac--aacaactacaaagttaaacactttttcagaattatacaa-ccat--ttagagaaagttagtcccaccc 486  Q
    ||||||||| ||||||||||||||||||||  |||||| || | ||||||| | |||| ||||| |||||| ||||  |||||||||| |||||||||||    
T  21399663 aaccctaatttctataacatcaaaactaacaaaacaacaac-atgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccc 21399761  T
Q  487 ttaccttag 495  Q
    |||||||||    
T  21399762 ttaccttag 21399770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 392 - 495
Target Start/End: Original strand, 21794156 - 21794263
Alignment:
Q  392 aaccctaatctctataacatcaaaactaac--aacaactacaaagttaaacactttttcagaattatacaa-ccat--ttagagaaagttagtcccaccc 486  Q
    ||||||||| ||||||||||||||||||||  |||||| || | ||||||| | |||| ||||| |||||| ||||  |||||||||| |||||||||||    
T  21794156 aaccctaatttctataacatcaaaactaacaaaacaacaac-atgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccc 21794254  T
Q  487 ttaccttag 495  Q
    |||||||||    
T  21794255 ttaccttag 21794263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 392 - 495
Target Start/End: Complemental strand, 22610370 - 22610266
Alignment:
Q  392 aaccctaatctctataacatcaaaactaacaacaactacaaagttaaacactttttcagaattatacaac-catt--tagagaaagttagtcccaccctt 488  Q
    |||| |||| |||||||||||||||||||||| |  ||  | ||||||| | |||| ||||| ||||||| ||||  |||||||||||||||||||||||    
T  22610370 aaccataatttctataacatcaaaactaacaaaa--taacatgttaaacccctttttagaatcatacaactcattattagagaaagttagtcccaccctt 22610273  T
Q  489 accttag 495  Q
    |||||||    
T  22610272 accttag 22610266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 421 - 483
Target Start/End: Complemental strand, 18023632 - 18023567
Alignment:
Q  421 caacaactacaaagttaaacactttttcagaattatacaacc---atttagagaaagttagtccca 483  Q
    |||||||||||| ||||||| |||||||||||||||||||||    ||||||||||| ||||||||    
T  18023632 caacaactacaatgttaaaccctttttcagaattatacaacccatctttagagaaagctagtccca 18023567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 402 - 494
Target Start/End: Complemental strand, 22258402 - 22258306
Alignment:
Q  402 tctataacatcaaaac-taacaacaactacaaagttaaacactttttcagaattatacaac-catt--tagagaaagttagtcccacccttacctta 494  Q
    |||| ||||||||||| || |||||||| ||| ||||||| ||||||  |||||||||||| ||||  ||||||||| ||||| |||||||||||||    
T  22258402 tctacaacatcaaaacctatcaacaactgcaaggttaaacccttttttggaattatacaactcattattagagaaagctagtctcacccttacctta 22258306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 434 - 490
Target Start/End: Original strand, 22483775 - 22483834
Alignment:
Q  434 gttaaacactttttcagaattatacaa-ccat--ttagagaaagttagtcccacccttac 490  Q
    ||||||| ||||||||||||||||||| ||||  |||||||||| |||||||||||||||    
T  22483775 gttaaaccctttttcagaattatacaacccattattagagaaagctagtcccacccttac 22483834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 465 - 508
Target Start/End: Complemental strand, 20022069 - 20022026
Alignment:
Q  465 ttagagaaagttagtcccacccttaccttagtattgatgatcgg 508  Q
    |||||||||||||||||||||||||||||||  | |||||||||    
T  20022069 ttagagaaagttagtcccacccttaccttagattagatgatcgg 20022026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 425 - 483
Target Start/End: Complemental strand, 38184984 - 38184923
Alignment:
Q  425 aactacaaagttaaacactttttcagaattatacaacc---atttagagaaagttagtccca 483  Q
    |||||||| ||||||| |||||||||||||||||||||    ||||||||||| ||||||||    
T  38184984 aactacaatgttaaaccctttttcagaattatacaacccatctttagagaaagctagtccca 38184923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 465 - 495
Target Start/End: Original strand, 5761556 - 5761586
Alignment:
Q  465 ttagagaaagttagtcccacccttaccttag 495  Q
    |||||||||||||||||||||||||||||||    
T  5761556 ttagagaaagttagtcccacccttaccttag 5761586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 465 - 495
Target Start/End: Complemental strand, 17906878 - 17906848
Alignment:
Q  465 ttagagaaagttagtcccacccttaccttag 495  Q
    |||||||||||||||||||||||||||||||    
T  17906878 ttagagaaagttagtcccacccttaccttag 17906848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 465 - 495
Target Start/End: Complemental strand, 22532161 - 22532131
Alignment:
Q  465 ttagagaaagttagtcccacccttaccttag 495  Q
    |||||||||||||||||||||||||||||||    
T  22532161 ttagagaaagttagtcccacccttaccttag 22532131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 465 - 495
Target Start/End: Complemental strand, 22536846 - 22536816
Alignment:
Q  465 ttagagaaagttagtcccacccttaccttag 495  Q
    |||||||||||||||||||||||||||||||    
T  22536846 ttagagaaagttagtcccacccttaccttag 22536816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 495
Target Start/End: Complemental strand, 22708428 - 22708323
Alignment:
Q  392 aaccctaatctctataacatcaaaactaacaacaactacaaagttaaacactttttcagaattatacaac-cat-ttagagaaagttagtcccaccctta 489  Q
    ||||||||  ||| |||||||| || || |||||||  ||||||||  | |||||| ||||||||| ||| ||| ||| |||| ||||||||||||||||    
T  22708428 aaccctaacttctttaacatcacaattatcaacaacatcaaagttagccccttttttagaattatagaactcatattaaagaaggttagtcccaccctta 22708329  T
Q  490 ccttag 495  Q
    ||||||    
T  22708328 ccttag 22708323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 442 - 508
Target Start/End: Original strand, 36305995 - 36306063
Alignment:
Q  442 ctttttcagaattatacaaccatt--tagagaaagttagtcccacccttaccttagtattgatgatcgg 508  Q
    |||||||||||| |||||||| ||  ||||||||| ||||| ||||||||||||||  | |||||||||    
T  36305995 ctttttcagaatcatacaaccgttattagagaaagctagtctcacccttaccttagattagatgatcgg 36306063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 392 - 447
Target Start/End: Complemental strand, 21697565 - 21697509
Alignment:
Q  392 aaccctaatctctataacatcaaaa-ctaacaacaactacaaagttaaacacttttt 447  Q
    ||||||||||||| ||||||||||| |||  ||||||||||| ||||||| ||||||    
T  21697565 aaccctaatctctttaacatcaaaacctattaacaactacaatgttaaacccttttt 21697509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 419 - 495
Target Start/End: Original strand, 22483912 - 22483990
Alignment:
Q  419 aacaacaactacaaagttaaacactttttcagaattatacaac-cat--ttagagaaagttagtcccacccttaccttag 495  Q
    ||||||||| || | ||||||| |||||| ||||||||||||| |||  |||||||||||||||||| | ||||||||||    
T  22483912 aacaacaacaaccatgttaaaccctttttaagaattatacaactcattattagagaaagttagtccc-cgcttaccttag 22483990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 73; Significance: 4e-33; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 392 - 491
Target Start/End: Original strand, 26674 - 26776
Alignment:
Q  392 aaccctaatctctataacatcaaaactaacaacaactacaaagttaaacactttttcagaattatacaacc---atttagagaaagttagtcccaccctt 488  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||   | ||||||||||||| ||||||||||    
T  26674 aaccctaatctctataacatcaaagctaacaacaactacaaagttaaaccctttttcagaattatacaacctaaaattagagaaagttaatcccaccctt 26773  T
Q  489 acc 491  Q
    |||    
T  26774 acc 26776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 402 - 495
Target Start/End: Original strand, 23571 - 23666
Alignment:
Q  402 tctataacatcaaaactaacaacaactacaaagttaaacactttttcagaattatacaaccat--ttagagaaagttagtcccacccttaccttag 495  Q
    ||||||||||||||||||  |||||||||||| |||||| |||||| ||||||||| |  |||  ||| |||| || |||||||||||||||||||    
T  23571 tctataacatcaaaactattaacaactacaaaattaaacccttttttagaattatatactcatgattaaagaaggtcagtcccacccttaccttag 23666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 72; Significance: 2e-32; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 392 - 495
Target Start/End: Original strand, 18744821 - 18744927
Alignment:
Q  392 aaccctaatctctataacatcaaaactaacaacaactacaaagttaaacactttttcagaattatacaa-ccat--ttagagaaagttagtcccaccctt 488  Q
    ||||||||| ||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||| ||||  ||||||||||||||||||||||||    
T  18744821 aaccctaatttctataacatcaaaactaataacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagttagtcccaccctt 18744920  T
Q  489 accttag 495  Q
    |||||||    
T  18744921 accttag 18744927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 403 - 495
Target Start/End: Original strand, 16063709 - 16063804
Alignment:
Q  403 ctataacatcaaaactaacaacaactacaaagttaaacactttttcagaattatacaa-ccat--ttagagaaagttagtcccacccttaccttag 495  Q
    |||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||| ||||  |||||||||| ||||||||||||||||||||    
T  16063709 ctataacatcaaaactaacaacaactacaaggttaaacccttttttagaattatacaacccattattagagaaaggtagtcccacccttaccttag 16063804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 392 - 494
Target Start/End: Complemental strand, 23199312 - 23199207
Alignment:
Q  392 aaccctaatctctataacatcaaaactaacaacaactacaaagttaaacactttttcagaattatacaa-ccat--ttagagaaagttagtcccaccctt 488  Q
    ||||||||| ||||||||||||||||||  ||||||||||| |||||||  |||||||||||||||||| ||||  |||||||||| |||||||||||||    
T  23199312 aaccctaatttctataacatcaaaactactaacaactacaaggttaaaccatttttcagaattatacaacccattattagagaaagctagtcccaccctt 23199213  T
Q  489 acctta 494  Q
    ||||||    
T  23199212 acctta 23199207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 403 - 495
Target Start/End: Complemental strand, 6551384 - 6551289
Alignment:
Q  403 ctataacatcaaaactaacaacaactacaaagttaaacactttttcagaattatacaac---catttagagaaagttagtcccacccttaccttag 495  Q
    ||||||||||||| |||||||||||||||| ||||||| ||||||||||||||||||||    | |||||||||||||||| ||||||||||||||    
T  6551384 ctataacatcaaatctaacaacaactacaaggttaaaccctttttcagaattatacaacttagaattagagaaagttagtctcacccttaccttag 6551289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 465 - 520
Target Start/End: Original strand, 17011751 - 17011806
Alignment:
Q  465 ttagagaaagttagtcccacccttaccttagtattgatgatcggcggtctctctcc 520  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17011751 ttagagaaagttagtcccacccttaccttagtattgatgatcggcggtctctctcc 17011806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 392 - 495
Target Start/End: Original strand, 660737 - 660841
Alignment:
Q  392 aaccctaatctctataacatcaaaactaacaacaactacaaagttaaacactttttcagaattatacaacc---atttagagaaagttagtcccaccctt 488  Q
    ||||| ||| ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||     |||||||||| ||||||| |||||    
T  660737 aacccaaatttctataacatcaaaactaacaacaactacaaggttaaac-ctttttcagaattatacaaccccttattagagaaagctagtccc-ccctt 660834  T
Q  489 accttag 495  Q
    |||||||    
T  660835 accttag 660841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 465 - 520
Target Start/End: Original strand, 31456983 - 31457038
Alignment:
Q  465 ttagagaaagttagtcccacccttaccttagtattgatgatcggcggtctctctcc 520  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  31456983 ttagagaaagttagtctcacccttaccttagtattgatgatcggcggtctctctcc 31457038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 465 - 520
Target Start/End: Complemental strand, 10774693 - 10774638
Alignment:
Q  465 ttagagaaagttagtcccacccttaccttagtattgatgatcggcggtctctctcc 520  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  10774693 ttagtgaaggttagtcccacccttaccttagtattgatgatcggcggtctctctcc 10774638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 392 - 490
Target Start/End: Complemental strand, 1627173 - 1627071
Alignment:
Q  392 aaccctaatctctataacatcaaaactaacaacaactacaaagttaaacac-tttttcagaattatacaac-cat--ttagagaaagttagtcccaccct 487  Q
    ||||||||| |||||||||||||||||||||| || ||||| | ||||| | ||||| ||||||||||||| |||  |||||||||| ||||||||||||    
T  1627173 aaccctaatttctataacatcaaaactaacaataaatacaagggtaaaccctttttttagaattatacaactcattattagagaaagctagtcccaccct 1627074  T
Q  488 tac 490  Q
    |||    
T  1627073 tac 1627071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 465 - 520
Target Start/End: Original strand, 30616637 - 30616692
Alignment:
Q  465 ttagagaaagttagtcccacccttaccttagtattgatgatcggcggtctctctcc 520  Q
    ||||||||||| ||||||||||||||| || |||||||||||||||||||||||||    
T  30616637 ttagagaaagtcagtcccacccttaccataatattgatgatcggcggtctctctcc 30616692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 474 - 520
Target Start/End: Complemental strand, 21554323 - 21554277
Alignment:
Q  474 gttagtcccacccttaccttagtattgatgatcggcggtctctctcc 520  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||    
T  21554323 gttagtcccacccttaccttagtattgatgatcagcggtctctctcc 21554277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 474 - 520
Target Start/End: Complemental strand, 21556969 - 21556923
Alignment:
Q  474 gttagtcccacccttaccttagtattgatgatcggcggtctctctcc 520  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||    
T  21556969 gttagtctcacccttaccttagtattgatgatcggcggtctctctcc 21556923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 392 - 452
Target Start/End: Original strand, 21504087 - 21504147
Alignment:
Q  392 aaccctaatctctataacatcaaaactaacaacaactacaaagttaaacactttttcagaa 452  Q
    ||||||||| ||||||||||||||||||  |||||||||||| |||||| |||||||||||    
T  21504087 aaccctaatttctataacatcaaaactactaacaactacaaacttaaaccctttttcagaa 21504147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 465 - 520
Target Start/End: Original strand, 29448863 - 29448918
Alignment:
Q  465 ttagagaaagttagtcccacccttaccttagtattgatgatcggcggtctctctcc 520  Q
    |||||||||||||||| || | |||||||||||||||||||||| |||||||||||    
T  29448863 ttagagaaagttagtctcatcattaccttagtattgatgatcggtggtctctctcc 29448918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 393 - 490
Target Start/End: Complemental strand, 21398904 - 21398800
Alignment:
Q  393 accctaatctctataacatcaaaactaacaacaactacaaa----gttaaacacttttt-cagaattatacaaccat--ttagagaaagttagtcccacc 485  Q
    |||||| |||||||||||||||||||||||||||| ||||     ||||||| |||||| ||||||||||||  |||  ||| |||| ||||||||||||    
T  21398904 accctattctctataacatcaaaactaacaacaacaacaacaaaggttaaacccttttttcagaattatacactcatgattaaagaaggttagtcccacc 21398805  T
Q  486 cttac 490  Q
    |||||    
T  21398804 cttac 21398800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 396 - 495
Target Start/End: Complemental strand, 32607418 - 32607315
Alignment:
Q  396 ctaatctctataacatcaaaactaacaacaactacaaa--gttaaacactttttcagaattatacaacc-att--tagagaaagttagtcccacccttac 490  Q
    ||||| |||||||||||||||||||||| ||| ||||   ||||||| | |||| ||||| |||||||| |||  ||||||||| |||||||||||||||    
T  32607418 ctaatttctataacatcaaaactaacaa-aacaacaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttac 32607320  T
Q  491 cttag 495  Q
    |||||    
T  32607319 cttag 32607315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 445 - 495
Target Start/End: Complemental strand, 21300096 - 21300043
Alignment:
Q  445 tttcagaattatacaacc---atttagagaaagttagtcccacccttaccttag 495  Q
    |||||||||||||||||    | |||||||||||||||||||||||||||||||    
T  21300096 tttcagaattatacaacttaaaattagagaaagttagtcccacccttaccttag 21300043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 445 - 495
Target Start/End: Original strand, 31622117 - 31622170
Alignment:
Q  445 tttcagaattatacaacc---atttagagaaagttagtcccacccttaccttag 495  Q
    ||||||||||||||||||   | ||||||||||||| |||||||||||||||||    
T  31622117 tttcagaattatacaacctaaaattagagaaagttaatcccacccttaccttag 31622170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 465 - 495
Target Start/End: Complemental strand, 20469205 - 20469175
Alignment:
Q  465 ttagagaaagttagtcccacccttaccttag 495  Q
    |||||||||||||||||||||||||||||||    
T  20469205 ttagagaaagttagtcccacccttaccttag 20469175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 465 - 495
Target Start/End: Complemental strand, 21617957 - 21617927
Alignment:
Q  465 ttagagaaagttagtcccacccttaccttag 495  Q
    |||||||||||||||||||||||||||||||    
T  21617957 ttagagaaagttagtcccacccttaccttag 21617927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 392 - 449
Target Start/End: Original strand, 24068176 - 24068234
Alignment:
Q  392 aaccctaatctctataacatcaaaa-ctaacaacaactacaaagttaaacactttttca 449  Q
    ||||||||||||| ||||||||||| |||  ||||||||||| ||||||| ||||||||    
T  24068176 aaccctaatctctttaacatcaaaacctattaacaactacaaggttaaaccctttttca 24068234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 474 - 520
Target Start/End: Original strand, 26832653 - 26832699
Alignment:
Q  474 gttagtcccacccttaccttagtattgatgatcggcggtctctctcc 520  Q
    |||| ||||||||||||| ||||||||||| || |||||||||||||    
T  26832653 gttactcccacccttaccgtagtattgatggtcagcggtctctctcc 26832699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 494
Target Start/End: Original strand, 266061 - 266090
Alignment:
Q  465 ttagagaaagttagtcccacccttacctta 494  Q
    ||||||||||||||||||||||||||||||    
T  266061 ttagagaaagttagtcccacccttacctta 266090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0505 (Bit Score: 71; Significance: 6e-32; HSPs: 1)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 392 - 494
Target Start/End: Original strand, 4883 - 4988
Alignment:
Q  392 aaccctaatctctataacatcaaaactaacaacaactacaaa-gttaaacactttttcagaattatacaaccat--ttagagaaagttagtcccaccctt 488  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||  |||||||||| |||||||||||||    
T  4883 aaccctaatcactataacatcaaaactaacaacaactacaaaggttaaacccttttacagaattatacaaccattattagagaaagctagtcccaccctt 4982  T
Q  489 acctta 494  Q
    ||||||    
T  4983 acctta 4988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 392 - 508
Target Start/End: Complemental strand, 18045 - 17926
Alignment:
Q  392 aaccctaatctctataacatcaaaactaacaacaactacaaagttaaacactttttcagaattatacaac---catttagagaaagttagtcccaccctt 488  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||    | ||||||||||||||||||||||||    
T  18045 aaccctaatttctataacatcaaaactaacaacaactacaaggttaaatcctttttcagaattatacaacttagaattagagaaagttagtcccaccctt 17946  T
Q  489 accttagtattgatgatcgg 508  Q
    |||||||  | |||||||||    
T  17945 accttagattagatgatcgg 17926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 69; Significance: 1e-30; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 392 - 495
Target Start/End: Original strand, 15998836 - 15998942
Alignment:
Q  392 aaccctaatctctataacatcaaaactaacaacaactacaaagttaaacactttttcagaattatacaac---catttagagaaagttagtcccaccctt 488  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||    | |||||||||||||||| |||||||    
T  15998836 aaccctaatttctataacatcaaaactaacaacaactacaaggttaaactctttttcagaattatacaacttagaattagagaaagttagtctcaccctt 15998935  T
Q  489 accttag 495  Q
    |||||||    
T  15998936 accttag 15998942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 402 - 495
Target Start/End: Complemental strand, 21683169 - 21683074
Alignment:
Q  402 tctataacatcaaaactaacaacaactacaaagttaaacactttttcagaattatacaa-ccat--ttagagaaagttagtcccacccttaccttag 495  Q
    |||||||||||||||||| |||||||||||| ||||||| ||||||| ||||||||||| ||||  |||||||||| ||||||||||||||||||||    
T  21683169 tctataacatcaaaacta-caacaactacaaggttaaaccctttttctgaattatacaacccattattagagaaagctagtcccacccttaccttag 21683074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 445 - 520
Target Start/End: Complemental strand, 27330033 - 27329955
Alignment:
Q  445 tttcagaattatacaacc---atttagagaaagttagtcccacccttaccttagtattgatgatcggcggtctctctcc 520  Q
    ||||||||||||||||||   | |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  27330033 tttcagaattatacaacctagaattagagaaagttagtcacactcttaccttagtattgatgatcggcggtctctctcc 27329955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 445 - 520
Target Start/End: Complemental strand, 27390773 - 27390695
Alignment:
Q  445 tttcagaattatacaacc---atttagagaaagttagtcccacccttaccttagtattgatgatcggcggtctctctcc 520  Q
    ||||||||||||||||||   | |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  27390773 tttcagaattatacaacctagaattagagaaagttagtcacactcttaccttagtattgatgatcggcggtctctctcc 27390695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 465 - 520
Target Start/End: Complemental strand, 15173482 - 15173427
Alignment:
Q  465 ttagagaaagttagtcccacccttaccttagtattgatgatcggcggtctctctcc 520  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  15173482 ttagagaaagttagtcccaccattaccttagtattgatgatcggcggtctctctcc 15173427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 8 - 93
Target Start/End: Original strand, 22470016 - 22470102
Alignment:
Q  8 caaagatggcacttcc-aacatttattacataaagaacacaggttcaagactttattctaaagtaattacaggtctctcgtattaga 93  Q
    |||||||||||||||| ||||||| |||||||| | ||| |||||||||||||||||||||||||| |||| |||||||||| ||||    
T  22470016 caaagatggcacttcccaacatttgttacataaggtacataggttcaagactttattctaaagtaactacaagtctctcgtaataga 22470102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 407 - 508
Target Start/End: Complemental strand, 19825576 - 19825472
Alignment:
Q  407 aacatcaaaactaacaacaactacaaagttaaacactttttcagaattatacaa-ccat--ttagagaaagttagtcccacccttaccttagtattgatg 503  Q
    |||||||||||||||||||||||||| ||||||  ||||||||||||||| ||| ||||  |||||||||| ||||| ||||||||||||||  | ||||    
T  19825576 aacatcaaaactaacaacaactacaaggttaaaacctttttcagaattatgcaacccattattagagaaagctagtctcacccttaccttagattagatg 19825477  T
Q  504 atcgg 508  Q
    |||||    
T  19825476 atcgg 19825472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 475 - 520
Target Start/End: Complemental strand, 28103467 - 28103422
Alignment:
Q  475 ttagtcccacccttaccttagtattgatgatcggcggtctctctcc 520  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  28103467 ttagtcccacccttaccttagtattgatgatcggcggtctctctcc 28103422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 392 - 495
Target Start/End: Original strand, 18982518 - 18982625
Alignment:
Q  392 aaccctaatctctataa-catcaaaactaacaacaactacaaagttaaacactttttcagaattatacaa-ccat--ttagagaaagttagtcccaccct 487  Q
    ||||||||| ||| ||| ||||||| ||| |||||||||||| ||||||| ||||||||||||||||||| ||||  ||||| ||||||| ||||||| |    
T  18982518 aaccctaatttctctaatcatcaaacctagcaacaactacaaggttaaaccctttttcagaattatacaacccattattagataaagttaatcccaccgt 18982617  T
Q  488 taccttag 495  Q
    ||||||||    
T  18982618 taccttag 18982625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 465 - 520
Target Start/End: Complemental strand, 15900683 - 15900628
Alignment:
Q  465 ttagagaaagttagtcccacccttaccttagtattgatgatcggcggtctctctcc 520  Q
    |||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||    
T  15900683 ttagagaaagttggtctcacccttaccttagtattgaagatcggcggtctctctcc 15900628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 392 - 494
Target Start/End: Complemental strand, 20410615 - 20410512
Alignment:
Q  392 aaccctaatctctataacatcaaaactaacaacaactacaaagttaaacactttttcagaattatacaa-ccat--ttagagaaagttagtcccaccctt 488  Q
    ||||||||| |||||  |||||||||||| ||||||||||| ||||||  ||||||||||||||||||| ||||  |||||||||| || | ||||||||    
T  20410615 aaccctaatttctat--catcaaaactaataacaactacaaggttaaatcctttttcagaattatacaacccattattagagaaagctatttccaccctt 20410518  T
Q  489 acctta 494  Q
    ||||||    
T  20410517 acctta 20410512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 402 - 457
Target Start/End: Complemental strand, 24506210 - 24506155
Alignment:
Q  402 tctataacatcaaaactaacaacaactacaaagttaaacactttttcagaattata 457  Q
    |||||||||||||||||| ||||||||||||| |||||| ||||||||||||||||    
T  24506210 tctataacatcaaaactatcaacaactacaaaattaaaccctttttcagaattata 24506155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 392 - 495
Target Start/End: Original strand, 1818900 - 1819005
Alignment:
Q  392 aaccctaatctctataacatcaaaactaacaacaactacaaagttaaacactttttcagaattatacaaccat--ttagagaaagttagtcccaccctta 489  Q
    ||||||||| ||||||||||||||||||  |||||||||||  |||||| ||||||||||| |||| |  |||  ||| |||| ||||||| ||||||||    
T  1818900 aaccctaatttctataacatcaaaactattaacaactacaagcttaaaccctttttcagaactatatactcatgattaaagaaggttagtctcaccctta 1818999  T
Q  490 ccttag 495  Q
    ||||||    
T  1819000 ccttag 1819005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 402 - 495
Target Start/End: Original strand, 23658045 - 23658142
Alignment:
Q  402 tctataacatcaaaac-taacaacaactacaaagttaaacactttttcagaattatacaacc-at--ttagagaaagttagtcccacccttaccttag 495  Q
    |||| ||||||||||| ||  ||||||||||| ||||||| ||||||||||||||||||||| ||  |||| ||||| ||||||||||||||||||||    
T  23658045 tctacaacatcaaaacctattaacaactacaaggttaaaccctttttcagaattatacaacctattattagggaaagctagtcccacccttaccttag 23658142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 474 - 520
Target Start/End: Original strand, 27852238 - 27852284
Alignment:
Q  474 gttagtcccacccttaccttagtattgatgatcggcggtctctctcc 520  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||    
T  27852238 gttagtcccacccttaccttagtattgatgatcagcggtctctctcc 27852284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 474 - 520
Target Start/End: Complemental strand, 20733264 - 20733218
Alignment:
Q  474 gttagtcccacccttaccttagtattgatgatcggcggtctctctcc 520  Q
    ||||||| ||||||||||||||||||||||||| |||||||||||||    
T  20733264 gttagtctcacccttaccttagtattgatgatcagcggtctctctcc 20733218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 403 - 495
Target Start/End: Complemental strand, 34140548 - 34140455
Alignment:
Q  403 ctataacatcaaaactaacaacaactacaaagttaaacactttttcagaattatacaaccat--ttagagaaagttagtcccacccttaccttag 495  Q
    ||||||||||||||||||||||||||||||  ||||||    ||||| ||||||| | ||||  |||||| ||| ||||||||||||||||||||    
T  34140548 ctataacatcaaaactaacaacaactacaagattaaaccagatttcaaaattataaacccattattagag-aagctagtcccacccttaccttag 34140455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 392 - 495
Target Start/End: Original strand, 10446163 - 10446270
Alignment:
Q  392 aaccctaatctctataacatcaaaactaacaacaactacaaa--gttaaacactttttcagaattatacaacc-att--tagagaaagttagtcccaccc 486  Q
    ||||||||| ||||||||||| |||||||||| ||| ||||   ||||||| | |||| ||||| |||||||| |||  ||||||||| |||||||||||    
T  10446163 aaccctaatttctataacatcgaaactaacaa-aacaacaacatgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccc 10446261  T
Q  487 ttaccttag 495  Q
    |||||||||    
T  10446262 ttaccttag 10446270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 392 - 452
Target Start/End: Original strand, 18982362 - 18982422
Alignment:
Q  392 aaccctaatctctataacatcaaaactaacaacaactacaaagttaaacactttttcagaa 452  Q
    ||||||||  |||| | ||||||||||| ||||||||||||| |||||| |||||||||||    
T  18982362 aaccctaacttctacagcatcaaaactatcaacaactacaaaattaaaccctttttcagaa 18982422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 445 - 495
Target Start/End: Complemental strand, 15890764 - 15890711
Alignment:
Q  445 tttcagaattatacaacc---atttagagaaagttagtcccacccttaccttag 495  Q
    |||||||||||||||||    | |||||||||||||||||||||||||||||||    
T  15890764 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttag 15890711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 434 - 505
Target Start/End: Original strand, 29045260 - 29045334
Alignment:
Q  434 gttaaacactttttcagaattatacaacc-att--tagagaaagttagtcccacccttaccttagtattgatgat 505  Q
    ||||||| |||||||| |||||||||||| |||  ||||||||| ||||| |||||||||||||| || ||||||    
T  29045260 gttaaaccctttttcaaaattatacaacccattattagagaaagctagtctcacccttaccttagaatagatgat 29045334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 403 - 495
Target Start/End: Complemental strand, 34153164 - 34153071
Alignment:
Q  403 ctataacatcaaaactaacaacaactacaaagttaaacactttttcagaattatacaaccat--ttagagaaagttagtcccacccttaccttag 495  Q
    ||||||||||||||||||||||||||||||  |||||     ||||| ||||||| | ||||  |||||| ||| ||||||||||||||||||||    
T  34153164 ctataacatcaaaactaacaacaactacaagattaaaacagatttcaaaattataaacccattattagag-aagctagtcccacccttaccttag 34153071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 445 - 494
Target Start/End: Original strand, 7827972 - 7828024
Alignment:
Q  445 tttcagaattatacaacc---atttagagaaagttagtcccacccttacctta 494  Q
    |||||||||||||||||    | ||||||||||||||||||||||||||||||    
T  7827972 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 7828024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 445 - 494
Target Start/End: Complemental strand, 23150339 - 23150287
Alignment:
Q  445 tttcagaattatacaacc---atttagagaaagttagtcccacccttacctta 494  Q
    |||||||||||||||||    | ||||||||||||||||||||||||||||||    
T  23150339 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 23150287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 392 - 455
Target Start/End: Complemental strand, 25601432 - 25601371
Alignment:
Q  392 aaccctaatctctataacatcaaaactaacaacaactacaaa-gttaaacactttttcagaatta 455  Q
    ||||||||| |||||||||| ||||||||   |||||||||| ||||||| ||||||||||||||    
T  25601432 aaccctaatttctataacatgaaaactaa---caactacaaaggttaaaccctttttcagaatta 25601371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 445 - 493
Target Start/End: Original strand, 24267849 - 24267900
Alignment:
Q  445 tttcagaattatacaacc---atttagagaaagttagtcccacccttacctt 493  Q
    |||||||||||||||||    | |||||||||||||||||||||||||||||    
T  24267849 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctt 24267900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1186 (Bit Score: 68; Significance: 4e-30; HSPs: 1)
Name: scaffold1186
Description:

Target: scaffold1186; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 392 - 495
Target Start/End: Original strand, 1967 - 2073
Alignment:
Q  392 aaccctaatctctataacatcaaaactaacaacaactacaaagttaaacactttttcagaattatacaa-ccat--ttagagaaagttagtcccaccctt 488  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| ||||  |||||||||| ||||| |||||||    
T  1967 aaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtctcaccctt 2066  T
Q  489 accttag 495  Q
    |||||||    
T  2067 accttag 2073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0878 (Bit Score: 68; Significance: 4e-30; HSPs: 1)
Name: scaffold0878
Description:

Target: scaffold0878; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 392 - 495
Target Start/End: Complemental strand, 3527 - 3421
Alignment:
Q  392 aaccctaatctctataacatcaaaactaacaacaactacaaagttaaacactttttcagaattatacaac-cat--ttagagaaagttagtcccaccctt 488  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||||||||| ||||||| |||  |||||||||| |||||||||||||    
T  3527 aaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaatcatacaacgcattattagagaaagctagtcccaccctt 3428  T
Q  489 accttag 495  Q
    |||||||    
T  3427 accttag 3421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 68; Significance: 4e-30; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 392 - 495
Target Start/End: Complemental strand, 186301 - 186195
Alignment:
Q  392 aaccctaatctctataacatcaaaactaacaacaactacaaagttaaacactttttcagaattatacaa-ccat--ttagagaaagttagtcccaccctt 488  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| ||||  |||||||||| ||||| |||||||    
T  186301 aaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtctcaccctt 186202  T
Q  489 accttag 495  Q
    |||||||    
T  186201 accttag 186195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 68; Significance: 4e-30; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 392 - 495
Target Start/End: Original strand, 14631082 - 14631188
Alignment:
Q  392 aaccctaatctctataacatcaaaactaacaacaactacaaagttaaacactttttcagaattatacaa-ccat--ttagagaaagttagtcccaccctt 488  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| ||||  |||||||||| ||||| |||||||    
T  14631082 aaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtctcaccctt 14631181  T
Q  489 accttag 495  Q
    |||||||    
T  14631182 accttag 14631188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 392 - 495
Target Start/End: Original strand, 25513798 - 25513904
Alignment:
Q  392 aaccctaatctctataacatcaaaactaacaacaactacaaagttaaacactttttcagaattatacaac-cat--ttagagaaagttagtcccaccctt 488  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| |||  |||||||||| |||||||||| ||    
T  25513798 aaccctaatttctataacatcaaaactaacaacaactacaatgttaaaccctttttcagaattatacaactcattattagagaaagctagtcccaccatt 25513897  T
Q  489 accttag 495  Q
    |||||||    
T  25513898 accttag 25513904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 404 - 495
Target Start/End: Original strand, 16296897 - 16296991
Alignment:
Q  404 tataacatcaaaactaacaacaactacaaagttaaacactttttcagaattatacaac-cat--ttagagaaagttagtcccacccttaccttag 495  Q
    ||||||||||||||||||||||||||| | ||||||| |||||||||||||||||||| |||  |||||||||| ||||||||||||||||||||    
T  16296897 tataacatcaaaactaacaacaactaccaggttaaaccctttttcagaattatacaactcattattagagaaagctagtcccacccttaccttag 16296991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 392 - 495
Target Start/End: Complemental strand, 2424492 - 2424386
Alignment:
Q  392 aaccctaatctctataacatcaaaactaacaacaactacaaagttaaacactttttcagaattatacaac---catttagagaaagttagtcccaccctt 488  Q
    ||||||||| ||||||||||||||||||| |||||||||||  |||||| |||||||| |||||||||||    | |||||||||||||||| |||||||    
T  2424492 aaccctaatttctataacatcaaaactaataacaactacaagattaaaccctttttcaaaattatacaacttagaattagagaaagttagtctcaccctt 2424393  T
Q  489 accttag 495  Q
    |||||||    
T  2424392 accttag 2424386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 465 - 520
Target Start/End: Original strand, 15008986 - 15009041
Alignment:
Q  465 ttagagaaagttagtcccacccttaccttagtattgatgatcggcggtctctctcc 520  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15008986 ttagagaaagttagtcccacccttaccttagtattgatgatcggcggtctctctcc 15009041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 392 - 495
Target Start/End: Original strand, 26446154 - 26446260
Alignment:
Q  392 aaccctaatctctataacatcaaaactaacaacaactacaaagttaaacactttttcagaattatacaa-ccat--ttagagaaagttagtcccaccctt 488  Q
    ||||||||| |||||||||||||||||||||||||||||||  ||||||  |||||||||||||||||| ||||  |||||||||| |||||| ||||||    
T  26446154 aaccctaatttctataacatcaaaactaacaacaactacaagattaaaccatttttcagaattatacaacccattattagagaaagctagtcctaccctt 26446253  T
Q  489 accttag 495  Q
    || ||||    
T  26446254 actttag 26446260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 392 - 455
Target Start/End: Complemental strand, 45314188 - 45314124
Alignment:
Q  392 aaccctaatctctataacatcaaaactaacaacaactacaaa-gttaaacactttttcagaatta 455  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  45314188 aaccctaatctctataacatcaaaactaacaacaactacaaatgttaaaccctttttcagaatta 45314124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 465 - 520
Target Start/End: Original strand, 14186981 - 14187036
Alignment:
Q  465 ttagagaaagttagtcccacccttaccttagtattgatgatcggcggtctctctcc 520  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  14186981 ttagagaaagttactcccacccttaccttagtattgatgatcggcggtctctctcc 14187036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 465 - 520
Target Start/End: Original strand, 40620555 - 40620610
Alignment:
Q  465 ttagagaaagttagtcccacccttaccttagtattgatgatcggcggtctctctcc 520  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  40620555 ttagagaaagttattcccacccttaccttagtattgatgatcggcggtctctctcc 40620610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 407 - 495
Target Start/End: Original strand, 9638972 - 9639063
Alignment:
Q  407 aacatcaaaactaacaacaactacaaagttaaacactttttcagaattatacaac-cat--ttagagaaagttagtcccacccttaccttag 495  Q
    |||||||||| || |||||||||||| ||||||| |||||||||||||| ||||| |||  |||||||||| ||||||||||||||||||||    
T  9638972 aacatcaaaattatcaacaactacaaggttaaaccctttttcagaattacacaactcattattagagaaagctagtcccacccttaccttag 9639063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 392 - 455
Target Start/End: Complemental strand, 26921614 - 26921550
Alignment:
Q  392 aaccctaatctctataacatcaaaactaacaacaactacaaa-gttaaacactttttcagaatta 455  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  26921614 aaccctaatctctatgacatcaaaactaacaacaactacaaatgttaaaccctttttcagaatta 26921550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 404 - 488
Target Start/End: Original strand, 35660915 - 35661002
Alignment:
Q  404 tataacatcaaaactaacaacaactacaaagttaaacactttttcagaattatacaa-ccat--ttagagaaagttagtcccaccctt 488  Q
    ||||||||||||||||||||||||||||| |||||||  ||||||| |||||||||| ||||  |||||||||| |||||||||||||    
T  35660915 tataacatcaaaactaacaacaactacaaggttaaaccatttttcataattatacaacccattattagagaaagctagtcccaccctt 35661002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 474 - 520
Target Start/End: Original strand, 10057693 - 10057739
Alignment:
Q  474 gttagtcccacccttaccttagtattgatgatcggcggtctctctcc 520  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  10057693 gttagtcccacccttaccttagtattgatgatcggcggtctctctcc 10057739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 392 - 495
Target Start/End: Complemental strand, 15239922 - 15239815
Alignment:
Q  392 aaccctaatctctataacatcaaaactaacaacaactacaaa-gttaaacactttttcagaattatacaa-ccat--ttagagaaagttagtcccaccct 487  Q
    |||||||||||||||||| ||||||| ||| ||||||| ||| ||||||| |||||||||| ||||||||  |||  |||||||||| ||||| ||||||    
T  15239922 aaccctaatctctataacctcaaaaccaacgacaactataaaggttaaaccctttttcagatttatacaattcattattagagaaagctagtctcaccct 15239823  T
Q  488 taccttag 495  Q
    ||||||||    
T  15239822 taccttag 15239815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 392 - 494
Target Start/End: Complemental strand, 12424397 - 12424290
Alignment:
Q  392 aaccctaatctctataacatcaaaac-taacaacaactacaaagttaaacacttttt--cagaattatacaacc-att--tagagaaagttagtcccacc 485  Q
    ||||||||| |||| ||||||||||| ||  ||||||||||||||||||| ||||||  ||||||||||||||| |||  ||||||||| ||||||||||    
T  12424397 aaccctaat-tctacaacatcaaaacctattaacaactacaaagttaaaccctttttttcagaattatacaacccattattagagaaagctagtcccacc 12424299  T
Q  486 cttacctta 494  Q
    |||||||||    
T  12424298 cttacctta 12424290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 404 - 495
Target Start/End: Original strand, 18462983 - 18463076
Alignment:
Q  404 tataacatcaaaactaacaacaactacaaagttaaacactttttcagaattatacaaccat--ttagagaaagttagtcccacccttaccttag 495  Q
    ||||||||||||||||  |||||||||||| |||||| |||||||||||||||| |  |||  ||| |||| |||||||||||| |||||||||    
T  18462983 tataacatcaaaactattaacaactacaaaattaaaccctttttcagaattatatactcatgattaaagaaggttagtcccacctttaccttag 18463076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 392 - 495
Target Start/End: Original strand, 14477579 - 14477684
Alignment:
Q  392 aaccctaatctctataacatcaaaactaacaacaactacaaagttaaacactttttcagaattatacaaccat--ttagagaaagttagtcccaccctta 489  Q
    ||||||||  |||||||||||||||||| |||| |||||||  | |||| |||||||||||||||| |  |||  ||| |||| |||||| |||||||||    
T  14477579 aaccctaacttctataacatcaaaactatcaacgactacaagatcaaaccctttttcagaattatatactcatgattaaagaaggttagtgccaccctta 14477678  T
Q  490 ccttag 495  Q
    ||||||    
T  14477679 ccttag 14477684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 421 - 480
Target Start/End: Complemental strand, 15747849 - 15747787
Alignment:
Q  421 caacaactacaaagttaaacactttttcagaattatacaac-ca--tttagagaaagttagtc 480  Q
    |||||||||||| ||||||| |||||||||||||||||||| ||  |||||||||||||||||    
T  15747849 caacaactacaatgttaaaccctttttcagaattatacaactcatctttagagaaagttagtc 15747787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 392 - 494
Target Start/End: Original strand, 33186850 - 33186955
Alignment:
Q  392 aaccctaatctctataacatcaaaac-taacaacaactacaaagttaaacactttttcagaattatacaa-ccat--ttagagaaagttagtcccaccct 487  Q
    ||||||||| |||| ||||||||||| ||  |||||| |||| ||||||| ||||||||||||||||||| ||||  |||||||||| ||||| |||||     
T  33186850 aaccctaat-tctacaacatcaaaacctattaacaaccacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtctcacccc 33186948  T
Q  488 tacctta 494  Q
    |||||||    
T  33186949 tacctta 33186955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 445 - 495
Target Start/End: Original strand, 15115222 - 15115275
Alignment:
Q  445 tttcagaattatacaacc---atttagagaaagttagtcccacccttaccttag 495  Q
    |||||||||||||||||    | |||||||||||||||||||||||||||||||    
T  15115222 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttag 15115275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 445 - 494
Target Start/End: Original strand, 11425943 - 11425995
Alignment:
Q  445 tttcagaattatacaacc---atttagagaaagttagtcccacccttacctta 494  Q
    |||||||||||||||||    | ||||||||||||||||||||||||||||||    
T  11425943 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 11425995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 465 - 495
Target Start/End: Complemental strand, 19434588 - 19434558
Alignment:
Q  465 ttagagaaagttagtcccacccttaccttag 495  Q
    |||||||||||||||||||||||||||||||    
T  19434588 ttagagaaagttagtcccacccttaccttag 19434558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 465 - 495
Target Start/End: Original strand, 21062664 - 21062694
Alignment:
Q  465 ttagagaaagttagtcccacccttaccttag 495  Q
    |||||||||||||||||||||||||||||||    
T  21062664 ttagagaaagttagtcccacccttaccttag 21062694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 445 - 494
Target Start/End: Original strand, 25091653 - 25091705
Alignment:
Q  445 tttcagaattatacaacc---atttagagaaagttagtcccacccttacctta 494  Q
    |||||||||||||||||    | ||||||||||||||||||||||||||||||    
T  25091653 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 25091705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 445 - 494
Target Start/End: Complemental strand, 53630526 - 53630474
Alignment:
Q  445 tttcagaattatacaacc---atttagagaaagttagtcccacccttacctta 494  Q
    |||||||||||||||||    | ||||||||||||||||||||||||||||||    
T  53630526 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 53630474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 494
Target Start/End: Complemental strand, 35811405 - 35811376
Alignment:
Q  465 ttagagaaagttagtcccacccttacctta 494  Q
    ||||||||||||||||||||||||||||||    
T  35811405 ttagagaaagttagtcccacccttacctta 35811376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 421 - 461
Target Start/End: Original strand, 17142998 - 17143038
Alignment:
Q  421 caacaactacaaagttaaacactttttcagaattatacaac 461  Q
    |||||||||||| ||||||| | ||||||||||||||||||    
T  17142998 caacaactacaatgttaaaccccttttcagaattatacaac 17143038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 68; Significance: 4e-30; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 392 - 495
Target Start/End: Original strand, 17208471 - 17208577
Alignment:
Q  392 aaccctaatctctataacatcaaaactaacaacaactacaaagttaaacactttttcagaattatacaac-cat--ttagagaaagttagtcccaccctt 488  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||||  |||||||||||||||||||| |||  |||||||||| |||||||||||||    
T  17208471 aaccctaatttctataacatcaaaactaacaacaactacaaggttaaatcctttttcagaattatacaactcattattagagaaagctagtcccaccctt 17208570  T
Q  489 accttag 495  Q
    |||||||    
T  17208571 accttag 17208577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 392 - 495
Target Start/End: Original strand, 14520393 - 14520499
Alignment:
Q  392 aaccctaatctctataacatcaaaactaacaacaactacaaagttaaacactttttcagaattatacaa-ccat--ttagagaaagttagtcccaccctt 488  Q
    ||||||||| | ||||||||||||||||||||||||||||| |||||||  ||||| |||||||||||| ||||  ||| |||||| |||||||||||||    
T  14520393 aaccctaatttttataacatcaaaactaacaacaactacaaggttaaacctttttttagaattatacaacccattattaaagaaagctagtcccaccctt 14520492  T
Q  489 accttag 495  Q
    |||||||    
T  14520493 accttag 14520499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 392 - 495
Target Start/End: Original strand, 29907585 - 29907692
Alignment:
Q  392 aaccctaatctctataa-catcaaaactaacaacaactacaaagttaaacactttttcagaattatacaacc--at-ttagagaaagttagtcccaccct 487  Q
    ||||||||| ||| ||| ||||||| |||||||||||||||| ||||||| |||||||||||||||||||||  || ||| |||||| ||||||||||||    
T  29907585 aaccctaatttctctaatcatcaaacctaacaacaactacaaggttaaaccctttttcagaattatacaacccaatattaaagaaagctagtcccaccct 29907684  T
Q  488 taccttag 495  Q
    ||||||||    
T  29907685 taccttag 29907692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 392 - 495
Target Start/End: Original strand, 29948751 - 29948858
Alignment:
Q  392 aaccctaatctctataa-catcaaaactaacaacaactacaaagttaaacactttttcagaattatacaacc--at-ttagagaaagttagtcccaccct 487  Q
    ||||||||| ||| ||| ||||||| |||||||||||||||| ||||||| |||||||||||||||||||||  || ||| |||||| ||||||||||||    
T  29948751 aaccctaatttctctaatcatcaaacctaacaacaactacaaggttaaaccctttttcagaattatacaacccaatattaaagaaagctagtcccaccct 29948850  T
Q  488 taccttag 495  Q
    ||||||||    
T  29948851 taccttag 29948858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 392 - 495
Target Start/End: Original strand, 29997905 - 29998012
Alignment:
Q  392 aaccctaatctctataa-catcaaaactaacaacaactacaaagttaaacactttttcagaattatacaacc--at-ttagagaaagttagtcccaccct 487  Q
    ||||||||| ||| ||| ||||||| |||||||||||||||| ||||||| |||||||||||||||||||||  || ||| |||||| ||||||||||||    
T  29997905 aaccctaatttctctaatcatcaaacctaacaacaactacaaggttaaaccctttttcagaattatacaacccaatattaaagaaagctagtcccaccct 29998004  T
Q  488 taccttag 495  Q
    ||||||||    
T  29998005 taccttag 29998012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 465 - 520
Target Start/End: Original strand, 36528890 - 36528945
Alignment:
Q  465 ttagagaaagttagtcccacccttaccttagtattgatgatcggcggtctctctcc 520  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  36528890 ttagagaaagttaatcccacccttaccttagtattgatgatcggcggtctctctcc 36528945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 392 - 508
Target Start/End: Complemental strand, 50350923 - 50350802
Alignment:
Q  392 aaccctaatctctataacatcaaaactaacaacaactacaaa-gttaaacac--tttttcagaattatacaaccat--ttagagaaagttagtcccaccc 486  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||||||| |  ||||||||||||||| |  |||  ||| |||| |||||||||||||    
T  50350923 aaccctaatctctataacatcaaaactaacaaaaactacaaaggttaaaccccttttttcagaattatatactcatgattaaagaaggttagtcccaccc 50350824  T
Q  487 ttaccttagtattgatgatcgg 508  Q
    |||||||||  | |||||||||    
T  50350823 ttaccttagattagatgatcgg 50350802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 407 - 508
Target Start/End: Complemental strand, 14641638 - 14641534
Alignment:
Q  407 aacatcaaaactaacaacaactacaaagttaaacactttttcagaattatacaa-ccat--ttagagaaagttagtcccacccttaccttagtattgatg 503  Q
    |||||||| ||||||||||||||||| ||||||| |||||| |||||||||||| ||||  |||||||||| || |||||||||||||||||  | ||||    
T  14641638 aacatcaatactaacaacaactacaaggttaaacccttttttagaattatacaacccattattagagaaagctaatcccacccttaccttagattagatg 14641539  T
Q  504 atcgg 508  Q
    |||||    
T  14641538 atcgg 14641534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 445 - 520
Target Start/End: Complemental strand, 24177788 - 24177710
Alignment:
Q  445 tttcagaattatacaacc---atttagagaaagttagtcccacccttaccttagtattgatgatcggcggtctctctcc 520  Q
    |||||||||||||||||    | |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  24177788 tttcagaattatacaacttataattagagaaagtttgtcccacccttaccttagtattgataatcggcggtctctctcc 24177710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 465 - 520
Target Start/End: Complemental strand, 15446897 - 15446842
Alignment:
Q  465 ttagagaaagttagtcccacccttaccttagtattgatgatcggcggtctctctcc 520  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  15446897 ttagagaaagttagtcccacccttaccttagtaatgatgatcggcgatctctctcc 15446842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 469 - 519
Target Start/End: Original strand, 16979939 - 16979989
Alignment:
Q  469 agaaagttagtcccacccttaccttagtattgatgatcggcggtctctctc 519  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  16979939 agaaagttagtcccacccttaccttagtattgatgatcgacggtctctctc 16979989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 474 - 520
Target Start/End: Complemental strand, 37641524 - 37641478
Alignment:
Q  474 gttagtcccacccttaccttagtattgatgatcggcggtctctctcc 520  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  37641524 gttagtcccacccttaccttagtattgatgatcggcggtctctctcc 37641478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 392 - 495
Target Start/End: Complemental strand, 14152504 - 14152398
Alignment:
Q  392 aaccctaatctctataacatcaaaactaac-aacaactacaaagttaaacactttttcagaattatacaac-cat--ttagagaaagttagtcccaccct 487  Q
    ||||||||| |||| |||||||||||  || ||||||||||| ||||||| |||||||||||| ||||||| |||  |||||||||| ||||||||||||    
T  14152504 aaccctaat-tctacaacatcaaaacctactaacaactacaaggttaaaccctttttcagaatgatacaactcattattagagaaagctagtcccaccct 14152406  T
Q  488 taccttag 495  Q
    ||||||||    
T  14152405 taccttag 14152398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 395 - 495
Target Start/End: Complemental strand, 3160728 - 3160626
Alignment:
Q  395 cctaatctctataacatcaaaactaacaacaactacaaagttaaacactttttcagaattatacaaccat--ttagagaaagttagtcccacccttacct 492  Q
    |||||| ||||||| |||||||||| |||||||||||||||||||| | |||| ||||||||| |  |||  ||| |||| ||||||| |||||||||||    
T  3160728 cctaatttctataatatcaaaactatcaacaactacaaagttaaacccatttttagaattatatactcatgattaaagaaggttagtctcacccttacct 3160629  T
Q  493 tag 495  Q
    |||    
T  3160628 tag 3160626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 465 - 520
Target Start/End: Complemental strand, 3263992 - 3263937
Alignment:
Q  465 ttagagaaagttagtcccacccttaccttagtattgatgatcggcggtctctctcc 520  Q
    |||||||| |||| ||| ||||||||||||||||||||||||||||||||||||||    
T  3263992 ttagagaaggttaatccgacccttaccttagtattgatgatcggcggtctctctcc 3263937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 474 - 520
Target Start/End: Original strand, 14967216 - 14967262
Alignment:
Q  474 gttagtcccacccttaccttagtattgatgatcggcggtctctctcc 520  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||    
T  14967216 gttagtcccccccttaccttagtattgatgatcggcggtctctctcc 14967262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 422 - 495
Target Start/End: Original strand, 15566721 - 15566797
Alignment:
Q  422 aacaactacaaagttaaacactttttcagaattatacaac---catttagagaaagttagtcccacccttaccttag 495  Q
    ||||||||||| ||||||| ||||||||||||||||||||    | |||||||||||||||||||||||||| ||||    
T  15566721 aacaactacaaggttaaaccctttttcagaattatacaacttagaattagagaaagttagtcccacccttactttag 15566797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 474 - 520
Target Start/End: Complemental strand, 52465391 - 52465345
Alignment:
Q  474 gttagtcccacccttaccttagtattgatgatcggcggtctctctcc 520  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||    
T  52465391 gttagtcacacccttaccttagtattgatgatcggcggtctctctcc 52465345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 395 - 495
Target Start/End: Complemental strand, 21845753 - 21845651
Alignment:
Q  395 cctaatctctataacatcaaaactaacaacaactacaaagttaaacactttttcagaattatacaaccat--ttagagaaagttagtcccacccttacct 492  Q
    |||||| ||||||||||||||||||  |||||||||||  |||||| ||||||||||| |||| |   ||  ||| |||| |||||||||||||||||||    
T  21845753 cctaatttctataacatcaaaactattaacaactacaagcttaaaccctttttcagaactatatacttatgattaaagaaggttagtcccacccttacct 21845654  T
Q  493 tag 495  Q
    |||    
T  21845653 tag 21845651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 392 - 495
Target Start/End: Complemental strand, 22841389 - 22841278
Alignment:
Q  392 aaccctaatctctataacatcaaaactaacaa--caactacaaa---gttaaacactttttcagaattatacaa-ccat--ttagagaaagttagtccca 483  Q
    ||||||||| |||||||| |||||||||||||  |||| ||||    ||||||| ||||||||||||||||||| ||||  |||||||||| ||||||||    
T  22841389 aaccctaatttctataacctcaaaactaacaaaacaacaacaatcatgttaaaccctttttcagaattatacaacccattattagagaaagctagtccca 22841290  T
Q  484 cccttaccttag 495  Q
    ||||||| ||||    
T  22841289 cccttacattag 22841278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 474 - 520
Target Start/End: Complemental strand, 52988878 - 52988832
Alignment:
Q  474 gttagtcccacccttaccttagtattgatgatcggcggtctctctcc 520  Q
    ||||||| ||||||||||||||||||||||||| |||||||||||||    
T  52988878 gttagtctcacccttaccttagtattgatgatctgcggtctctctcc 52988832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 392 - 495
Target Start/End: Original strand, 6003133 - 6003238
Alignment:
Q  392 aaccctaatctctataacatcaaaactaacaacaactacaaagttaaacactttttcagaattatacaac-cat-ttagagaaagttagtcccaccctta 489  Q
    ||||||||| ||| |||||||| || || |||||||  ||||||||  | |||||||||||||||| ||| ||| ||| |||| ||||||||||||||||    
T  6003133 aaccctaatttctttaacatcacaattatcaacaacatcaaagttagcccctttttcagaattatagaactcatattaaagaaggttagtcccaccctta 6003232  T
Q  490 ccttag 495  Q
    ||||||    
T  6003233 ccttag 6003238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 392 - 494
Target Start/End: Complemental strand, 54875580 - 54875474
Alignment:
Q  392 aaccctaatctctataacatcaaaactaac--aacaactacaaagttaaacactttttcagaattatacaa-ccat--ttagagaaagttagtcccaccc 486  Q
    ||||||||| ||||||||||||||||||||  |||||| || | ||||||| | |||| ||||| |||||| ||||  |||||||||| |||||||||||    
T  54875580 aaccctaatttctataacatcaaaactaacaaaacaacaac-atgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccc 54875482  T
Q  487 ttacctta 494  Q
    ||||||||    
T  54875481 ttacctta 54875474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 402 - 495
Target Start/End: Original strand, 48631289 - 48631384
Alignment:
Q  402 tctataacatcaaaactaacaacaactacaaagttaaacactttttcagaattatacaaccat--ttagagaaagttagtcccacccttaccttag 495  Q
    ||||||||||||||||||  |||||||||||  |||||| ||||||||||| |||| |   ||  ||| |||| ||||||||||||||||||||||    
T  48631289 tctataacatcaaaactattaacaactacaagcttaaaccctttttcagaactatatatttatgattaaagaaggttagtcccacccttaccttag 48631384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 421 - 483
Target Start/End: Complemental strand, 2247942 - 2247877
Alignment:
Q  421 caacaactacaaagttaaacactttttcagaattatacaacc---atttagagaaagttagtccca 483  Q
    |||||||||||| ||||||| |||||||||||||||||||||    ||||||||||| ||||||||    
T  2247942 caacaactacaatgttaaaccctttttcagaattatacaacccatctttagagaaagctagtccca 2247877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 392 - 494
Target Start/End: Original strand, 5215594 - 5215699
Alignment:
Q  392 aaccctaatctctataacatcaaaac-taacaacaactacaaagttaaacactttttcagaattatacaac-cat--ttagagaaagttagtcccaccct 487  Q
    ||||||||| |||| ||||||||||| ||  || |||||||| ||||||| |||||||| ||||||||||| |||  |||||||||| |||| |||||||    
T  5215594 aaccctaat-tctacaacatcaaaacctattaataactacaaggttaaaccctttttcataattatacaactcattattagagaaagctagtgccaccct 5215692  T
Q  488 tacctta 494  Q
    |||||||    
T  5215693 tacctta 5215699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 482 - 520
Target Start/End: Complemental strand, 31223864 - 31223826
Alignment:
Q  482 cacccttaccttagtattgatgatcggcggtctctctcc 520  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  31223864 cacccttaccttagtattgatgatcggtggtctctctcc 31223826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 419 - 495
Target Start/End: Complemental strand, 12917384 - 12917305
Alignment:
Q  419 aacaacaactacaaagttaaacactttttcagaattatacaacc-att--tagagaaagttagtcccacccttaccttag 495  Q
    ||||||||| || | ||||||| |||||| ||||| |||||||| |||  |||||||||||||||||||||||| |||||    
T  12917384 aacaacaacaaccatgttaaacccttttttagaatcatacaacccattattagagaaagttagtcccacccttatcttag 12917305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 419 - 487
Target Start/End: Complemental strand, 45803409 - 45803338
Alignment:
Q  419 aacaacaactacaaagttaaacactttttcagaattatacaa-ccat--ttagagaaagttagtcccaccct 487  Q
    ||||||||| || | ||||||| ||||||||||||||||||| ||||  |||||||||| ||||||||||||    
T  45803409 aacaacaacaacgatgttaaaccctttttcagaattatacaacccattattagagaaagctagtcccaccct 45803338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 392 - 508
Target Start/End: Original strand, 6159351 - 6159471
Alignment:
Q  392 aaccctaatctctataacatcaaaactaac--aacaactacaaagttaaacactttttcagaattatacaa-ccat--ttagagaaagttagtcccaccc 486  Q
    ||||||||| ||||||||||||||||||||  |||||| || | ||||||| | |||| ||||| |||||| ||||  ||||||||||  |||| |||||    
T  6159351 aaccctaatttctataacatcaaaactaacaaaacaacaac-atgttaaacccctttttagaatcatacaacccattattagagaaagcgagtctcaccc 6159449  T
Q  487 ttaccttagtattgatgatcgg 508  Q
    |||||||||  | |||||||||    
T  6159450 ttaccttagattagatgatcgg 6159471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 445 - 495
Target Start/End: Original strand, 40807996 - 40808049
Alignment:
Q  445 tttcagaattatacaacc---atttagagaaagttagtcccacccttaccttag 495  Q
    |||||||||||||||||    | |||||||||||||||||||||||||||||||    
T  40807996 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttag 40808049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 445 - 495
Target Start/End: Original strand, 44274418 - 44274471
Alignment:
Q  445 tttcagaattatacaacc---atttagagaaagttagtcccacccttaccttag 495  Q
    |||||||||||||||||    | |||||||||||||||||||||||||||||||    
T  44274418 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttag 44274471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 465 - 495
Target Start/End: Complemental strand, 5200272 - 5200242
Alignment:
Q  465 ttagagaaagttagtcccacccttaccttag 495  Q
    |||||||||||||||||||||||||||||||    
T  5200272 ttagagaaagttagtcccacccttaccttag 5200242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 465 - 495
Target Start/End: Original strand, 13185918 - 13185948
Alignment:
Q  465 ttagagaaagttagtcccacccttaccttag 495  Q
    |||||||||||||||||||||||||||||||    
T  13185918 ttagagaaagttagtcccacccttaccttag 13185948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 465 - 495
Target Start/End: Original strand, 16050950 - 16050980
Alignment:
Q  465 ttagagaaagttagtcccacccttaccttag 495  Q
    |||||||||||||||||||||||||||||||    
T  16050950 ttagagaaagttagtcccacccttaccttag 16050980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 445 - 494
Target Start/End: Original strand, 17044966 - 17045018
Alignment:
Q  445 tttcagaattatacaacc---atttagagaaagttagtcccacccttacctta 494  Q
    |||||||||||||||||    | ||||||||||||||||||||||||||||||    
T  17044966 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 17045018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 445 - 494
Target Start/End: Original strand, 17047126 - 17047178
Alignment:
Q  445 tttcagaattatacaacc---atttagagaaagttagtcccacccttacctta 494  Q
    |||||||||||||||||    | ||||||||||||||||||||||||||||||    
T  17047126 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 17047178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 445 - 494
Target Start/End: Original strand, 17541434 - 17541486
Alignment:
Q  445 tttcagaattatacaacc---atttagagaaagttagtcccacccttacctta 494  Q
    |||||||||||||||||    | ||||||||||||||||||||||||||||||    
T  17541434 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 17541486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 465 - 495
Target Start/End: Complemental strand, 19568237 - 19568207
Alignment:
Q  465 ttagagaaagttagtcccacccttaccttag 495  Q
    |||||||||||||||||||||||||||||||    
T  19568237 ttagagaaagttagtcccacccttaccttag 19568207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 445 - 494
Target Start/End: Complemental strand, 22306635 - 22306583
Alignment:
Q  445 tttcagaattatacaacc---atttagagaaagttagtcccacccttacctta 494  Q
    |||||||||||||||||    | ||||||||||||||||||||||||||||||    
T  22306635 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 22306583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 465 - 495
Target Start/End: Original strand, 40812856 - 40812886
Alignment:
Q  465 ttagagaaagttagtcccacccttaccttag 495  Q
    |||||||||||||||||||||||||||||||    
T  40812856 ttagagaaagttagtcccacccttaccttag 40812886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 432
Target Start/End: Original strand, 13520416 - 13520445
Alignment:
Q  403 ctataacatcaaaactaacaacaactacaa 432  Q
    ||||||||||||||||||||||||||||||    
T  13520416 ctataacatcaaaactaacaacaactacaa 13520445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 494
Target Start/End: Complemental strand, 17669804 - 17669698
Alignment:
Q  392 aaccctaatctctataacatcaaaactaac--aacaactacaaagttaaacactttttcagaattatacaa-ccat--ttagagaaagttagtcccaccc 486  Q
    ||||||||| ||||||||||||||||||||  |||||| || | ||||||| | |||| ||||| |||||| ||||  |||||||||| |||||||| |     
T  17669804 aaccctaatttctataacatcaaaactaacaaaacaacaac-atgttaaacccctttttagaatcatacaacccattattagagaaagctagtcccatca 17669706  T
Q  487 ttacctta 494  Q
    ||||||||    
T  17669705 ttacctta 17669698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 482
Target Start/End: Complemental strand, 50755360 - 50755266
Alignment:
Q  392 aaccctaatctctataacatcaaaactaacaa--caactacaaagttaaacactttttcagaattatacaa-ccat--ttagagaaagttagtccc 482  Q
    ||||||||| ||||||||||||||||||||||  |||| || | ||||||| | |||| ||||| |||||| ||||  ||||||||||||||||||    
T  50755360 aaccctaatttctataacatcaaaactaacaaagcaacaac-atgttaaacccctttttagaatcatacaatccattattagagaaagttagtccc 50755266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 466 - 494
Target Start/End: Complemental strand, 41172399 - 41172371
Alignment:
Q  466 tagagaaagttagtcccacccttacctta 494  Q
    |||||||||||||||||||||||||||||    
T  41172399 tagagaaagttagtcccacccttacctta 41172371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 392 - 495
Target Start/End: Complemental strand, 5410 - 5304
Alignment:
Q  392 aaccctaatctctataacatcaaaactaacaacaactacaaagttaaacactttttcagaattatacaac---catttagagaaagttagtcccaccctt 488  Q
    ||||||||| |||||||||||||||| |||||||||||||| ||||||| |||||| |||||||||||||    | ||||||||||||||||||||||||    
T  5410 aaccctaatatctataacatcaaaacgaacaacaactacaaggttaaaccctttttaagaattatacaacttaaaattagagaaagttagtcccaccctt 5311  T
Q  489 accttag 495  Q
    |||||||    
T  5310 accttag 5304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 64; Significance: 9e-28; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 392 - 495
Target Start/End: Complemental strand, 15575754 - 15575648
Alignment:
Q  392 aaccctaatctctataacatcaaaactaacaacaactacaaagttaaacactttttcagaattatacaa-ccat--ttagagaaagttagtcccaccctt 488  Q
    ||||||||| ||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||| ||||  |||||||||| ||||||||||| |    
T  15575754 aaccctaatttctataacatcaaaactaacaacaagtacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtcccacccct 15575655  T
Q  489 accttag 495  Q
    |||||||    
T  15575654 accttag 15575648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 396 - 495
Target Start/End: Original strand, 43745607 - 43745709
Alignment:
Q  396 ctaatctctataacatcaaaactaacaacaactacaaagttaaacactttttcagaattatacaac-cat--ttagagaaagttagtcccacccttacct 492  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||||| |||  |||||||||| |||||||||||||||||    
T  43745607 ctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcataattatacaactcattattagagaaagctagtcccacccttacct 43745706  T
Q  493 tag 495  Q
    |||    
T  43745707 tag 43745709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 392 - 495
Target Start/End: Complemental strand, 4690768 - 4690662
Alignment:
Q  392 aaccctaatctctataacatcaaaactaacaacaactacaaagttaaacactttttcagaattatacaac---catttagagaaagttagtcccaccctt 488  Q
    ||||||||| ||||||||||||||| ||| ||||||||||| ||||||| ||||||||||||||||||||    | ||||||||||||||||||||| ||    
T  4690768 aaccctaatttctataacatcaaaagtaataacaactacaaggttaaaccctttttcagaattatacaacttagaattagagaaagttagtcccaccttt 4690669  T
Q  489 accttag 495  Q
    |||||||    
T  4690668 accttag 4690662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 392 - 495
Target Start/End: Original strand, 47095399 - 47095505
Alignment:
Q  392 aaccctaatctctataacatcaaaactaacaacaactacaaagttaaacactttttcagaattatacaa-ccat--ttagagaaagttagtcccaccctt 488  Q
    ||||||||| |||||||||||||| |||||||||||||||| |||||||  |||||||||||||| ||| ||||  |||||||||| |||||||||||||    
T  47095399 aaccctaatttctataacatcaaacctaacaacaactacaaggttaaaccatttttcagaattattcaacccattattagagaaagctagtcccaccctt 47095498  T
Q  489 accttag 495  Q
    |||||||    
T  47095499 accttag 47095505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 403 - 508
Target Start/End: Original strand, 19195570 - 19195677
Alignment:
Q  403 ctataacatcaaaactaacaacaactacaaagttaaacactttttcagaattatacaac-cat--ttagagaaagttagtcccacccttaccttagtatt 499  Q
    |||||||||||||||||||||||||||||| ||||||| | |||||||||||||||||| |||  |||||||||| ||||||||||||||||||||  |     
T  19195570 ctataacatcaaaactaacaacaactacaaggttaaac-ccttttcagaattatacaactcattattagagaaagctagtcccacccttaccttagatta 19195668  T
Q  500 gatgatcgg 508  Q
    |||||||||    
T  19195669 gatgatcgg 19195677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 403 - 495
Target Start/End: Complemental strand, 708523 - 708428
Alignment:
Q  403 ctataacatcaaaactaacaacaactacaaagttaaacactttttcagaattatacaa-ccat--ttagagaaagttagtcccacccttaccttag 495  Q
    |||||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||| ||||  |||||||||| ||||||||||| ||||||||    
T  708523 ctataacatcaaaactaacagcaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtcccacccctaccttag 708428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 395 - 495
Target Start/End: Complemental strand, 20252284 - 20252181
Alignment:
Q  395 cctaatctctataacatcaaaactaacaacaactacaaagttaaacactttttcagaattatacaac-cat--ttagagaaagttagtcccacccttacc 491  Q
    |||||| |||||||||| |||||||| ||||||||||| ||||||| |||||||||||||||||||| |||  |||||||||| |||||| |||||||||    
T  20252284 cctaatttctataacattaaaactaataacaactacaatgttaaaccctttttcagaattatacaactcattattagagaaagctagtcctacccttacc 20252185  T
Q  492 ttag 495  Q
    ||||    
T  20252184 ttag 20252181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 465 - 520
Target Start/End: Complemental strand, 16550034 - 16549979
Alignment:
Q  465 ttagagaaagttagtcccacccttaccttagtattgatgatcggcggtctctctcc 520  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  16550034 ttagagaaagttagtcccaaccttaccttagtattgatgatcggcagtctctctcc 16549979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 465 - 520
Target Start/End: Original strand, 16615628 - 16615683
Alignment:
Q  465 ttagagaaagttagtcccacccttaccttagtattgatgatcggcggtctctctcc 520  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  16615628 ttagagaaagttagtcccaaccttaccttagtattgatgatcggcagtctctctcc 16615683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 465 - 520
Target Start/End: Complemental strand, 29052211 - 29052156
Alignment:
Q  465 ttagagaaagttagtcccacccttaccttagtattgatgatcggcggtctctctcc 520  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  29052211 ttagagaaagttagtcccacccttaccttagtattgatgatcgacggtttctctcc 29052156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 474 - 520
Target Start/End: Complemental strand, 19485993 - 19485947
Alignment:
Q  474 gttagtcccacccttaccttagtattgatgatcggcggtctctctcc 520  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  19485993 gttagtcccacccttaccttagtattgatgatcggcggtctctctcc 19485947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 422 - 495
Target Start/End: Complemental strand, 8513828 - 8513752
Alignment:
Q  422 aacaactacaaagttaaacactttttcagaattatacaacc-att--tagagaaagttagtcccacccttaccttag 495  Q
    ||||||||||| ||||||| |||||| |||||||||||||| |||  ||||||||||||||||||||||||||||||    
T  8513828 aacaactacaaggttaaacccttttttagaattatacaacccattattagagaaagttagtcccacccttaccttag 8513752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 392 - 494
Target Start/End: Complemental strand, 43276848 - 43276744
Alignment:
Q  392 aaccctaatctctataacatcaaaac-taacaacaactacaaagttaaacactttttcagaattatacaacc-att--tagagaaagttagtcccaccct 487  Q
    ||||||||| |||| ||||||||||| ||  ||||||||||| ||||||| | ||||||||||||||||||| |||  ||||||||||||||||||||||    
T  43276848 aaccctaat-tctacaacatcaaaacctattaacaactacaaggttaaac-cattttcagaattatacaacccattattagagaaagttagtcccaccct 43276751  T
Q  488 tacctta 494  Q
    |||||||    
T  43276750 tacctta 43276744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 392 - 495
Target Start/End: Complemental strand, 48212834 - 48212726
Alignment:
Q  392 aaccctaatctctataacatcaaaactaacaacaactacaaagttaaacac--tttttcagaattatacaaccattta---gagaaagttagtcccaccc 486  Q
    ||||||||| ||||||||||||||||||||||||| ||||| ||||||| |  ||||| ||||| ||||||||  |||   ||||||| ||||| |||||    
T  48212834 aaccctaatttctataacatcaaaactaacaacaattacaatgttaaacccctttttttagaatcatacaacctattattggagaaagctagtcacaccc 48212735  T
Q  487 ttaccttag 495  Q
    |||||||||    
T  48212734 ttaccttag 48212726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 474 - 520
Target Start/End: Complemental strand, 30820171 - 30820125
Alignment:
Q  474 gttagtcccacccttaccttagtattgatgatcggcggtctctctcc 520  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||    
T  30820171 gttagtcccaccctcaccttagtattgatgatcggcggtctctctcc 30820125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 422 - 495
Target Start/End: Complemental strand, 8488169 - 8488093
Alignment:
Q  422 aacaactacaaagttaaacactttttcagaattatacaacc-att--tagagaaagttagtcccacccttaccttag 495  Q
    |||||||| || ||||||| |||||| |||||||||||||| |||  ||||||||||||||||||||||||||||||    
T  8488169 aacaactataaggttaaacccttttttagaattatacaacccattattagagaaagttagtcccacccttaccttag 8488093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 392 - 495
Target Start/End: Original strand, 16186860 - 16186956
Alignment:
Q  392 aaccctaatctctataacatcaaaactaacaacaactacaaagttaaacactttttcagaattatacaaccatttagagaaagttagtcccacccttacc 491  Q
    ||||||||| ||||||||||||||||||  |||||| | || ||||||| ||||||||||||||||||       | |||||| ||||||||||||||||    
T  16186860 aaccctaatttctataacatcaaaactactaacaaccataaggttaaaccctttttcagaattataca-------atagaaagctagtcccacccttacc 16186952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 479 - 520
Target Start/End: Complemental strand, 46579774 - 46579733
Alignment:
Q  479 tcccacccttaccttagtattgatgatcggcggtctctctcc 520  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  46579774 tcccacccttaccttagtattgatgatcggcggtctctctcc 46579733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 392 - 495
Target Start/End: Complemental strand, 18874769 - 18874664
Alignment:
Q  392 aaccctaatctctataacatcaaaactaacaacaactacaaagttaaacac--tttttcagaattatacaa-ccat--ttagagaaagttagtcccaccc 486  Q
    ||||||||| |||||||||||||||||   | ||||||||| ||||||| |  |||||||||||||||||| ||||  |||||||||| ||||| |||||    
T  18874769 aaccctaatttctataacatcaaaact---accaactacaaggttaaaccccttttttcagaattatacaacccattattagagaaagctagtctcaccc 18874673  T
Q  487 ttaccttag 495  Q
    |||||||||    
T  18874672 ttaccttag 18874664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 434 - 495
Target Start/End: Complemental strand, 16250285 - 16250221
Alignment:
Q  434 gttaaacactttttcagaattatacaac-catt--tagagaaagttagtcccacccttaccttag 495  Q
    ||||||| |||||||| ||||||||||| ||||  ||||||||||||||||||||||||||||||    
T  16250285 gttaaaccctttttcaaaattatacaactcattattagagaaagttagtcccacccttaccttag 16250221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 392 - 508
Target Start/End: Complemental strand, 58516 - 58399
Alignment:
Q  392 aaccctaatctctataacatcaaaactaacaacaactacaaagttaaacactttttcagaattatacaacc-att--tagagaaagttagtcccaccctt 488  Q
    ||||||||| ||| |||||||||||||||||| ||| |||  ||||||| | |||| ||||| |||||||| |||  ||||||||| |||||||||||||    
T  58516 aaccctaatttctttaacatcaaaactaacaa-aacaacat-gttaaacccctttttagaatcatacaacccattattagagaaagctagtcccaccctt 58419  T
Q  489 accttagtattgatgatcgg 508  Q
    |||||||  | |||||||||    
T  58418 accttagattagatgatcgg 58399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 435 - 495
Target Start/End: Original strand, 38299738 - 38299801
Alignment:
Q  435 ttaaacactttttcagaattatacaacc-att--tagagaaagttagtcccacccttaccttag 495  Q
    |||||| ||||||||||||||||||||| |||  ||||||||| ||||||||||||||||||||    
T  38299738 ttaaaccctttttcagaattatacaacccattattagagaaagctagtcccacccttaccttag 38299801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 392 - 495
Target Start/End: Complemental strand, 8930871 - 8930764
Alignment:
Q  392 aaccctaatctctataacatcaaaactaac--aacaactacaaagttaaacactttttcagaattatacaa-ccat--ttagagaaagttagtcccaccc 486  Q
    ||||||||| ||||||||||||||||||||  |||||| || | ||||||| | |||| ||||| |||||| ||||  |||||||||  |||||||||||    
T  8930871 aaccctaatttctataacatcaaaactaacaaaacaacaac-atgttaaacccctttttagaatcatacaacccattattagagaaatgtagtcccaccc 8930773  T
Q  487 ttaccttag 495  Q
    |||||||||    
T  8930772 ttaccttag 8930764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 445 - 508
Target Start/End: Complemental strand, 12127215 - 12127149
Alignment:
Q  445 tttcagaattatacaacc---atttagagaaagttagtcccacccttaccttagtattgatgatcgg 508  Q
    |||||||||||||||||    | |||||||||||||||||||||||||||||||  | |||||||||    
T  12127215 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttagattagatgatcgg 12127149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 442 - 494
Target Start/End: Original strand, 19283053 - 19283108
Alignment:
Q  442 ctttttcagaattatacaacc-att--tagagaaagttagtcccacccttacctta 494  Q
    ||||||||||||||||||||| |||  ||||||||||||||| |||||||||||||    
T  19283053 ctttttcagaattatacaacccattcttagagaaagttagtctcacccttacctta 19283108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 402 - 495
Target Start/End: Original strand, 33060396 - 33060491
Alignment:
Q  402 tctataacatcaaaactaacaacaactacaaagttaaacactttttcagaattatacaaccat--ttagagaaagttagtcccacccttaccttag 495  Q
    ||||| ||||||||| ||  |||||| ||||| |||||| ||||| |||||||||| |  |||  ||| |||| ||||||||||||||||||||||    
T  33060396 tctattacatcaaaattataaacaacaacaaaattaaacccttttccagaattatagactcatgattaaagaaggttagtcccacccttaccttag 33060491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 465 - 508
Target Start/End: Complemental strand, 13147501 - 13147458
Alignment:
Q  465 ttagagaaagttagtcccacccttaccttagtattgatgatcgg 508  Q
    |||||||||||||||||||||||||||||| | | |||||||||    
T  13147501 ttagagaaagttagtcccacccttaccttaatttagatgatcgg 13147458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 392 - 431
Target Start/End: Complemental strand, 15700839 - 15700800
Alignment:
Q  392 aaccctaatctctataacatcaaaactaacaacaactaca 431  Q
    ||||||||| |||||||||| |||||||||||||||||||    
T  15700839 aaccctaatttctataacattaaaactaacaacaactaca 15700800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 445 - 495
Target Start/End: Original strand, 20586352 - 20586405
Alignment:
Q  445 tttcagaattatacaacc---atttagagaaagttagtcccacccttaccttag 495  Q
    |||||||||||||||||    | |||||||||||||||||||||||||||||||    
T  20586352 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttag 20586405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 481 - 520
Target Start/End: Complemental strand, 36685159 - 36685120
Alignment:
Q  481 ccacccttaccttagtattgatgatcggcggtctctctcc 520  Q
    ||||||||||||||||||||||||||  ||||||||||||    
T  36685159 ccacccttaccttagtattgatgatcaacggtctctctcc 36685120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 402 - 457
Target Start/End: Complemental strand, 42565927 - 42565872
Alignment:
Q  402 tctataacatcaaaactaacaacaactacaaagttaaacactttttcagaattata 457  Q
    ||||||||| ||||| || ||||||||||||  |||||| ||||||||||||||||    
T  42565927 tctataacaacaaaattatcaacaactacaagattaaaccctttttcagaattata 42565872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 437 - 495
Target Start/End: Original strand, 3287736 - 3287797
Alignment:
Q  437 aaacactttttcagaattatacaacc-att--tagagaaagttagtcccacccttaccttag 495  Q
    |||||| ||||||||||||||||||| |||  ||||||||| ||||| ||||||||||||||    
T  3287736 aaacacattttcagaattatacaacctattattagagaaagctagtctcacccttaccttag 3287797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 465 - 495
Target Start/End: Original strand, 4071843 - 4071873
Alignment:
Q  465 ttagagaaagttagtcccacccttaccttag 495  Q
    |||||||||||||||||||||||||||||||    
T  4071843 ttagagaaagttagtcccacccttaccttag 4071873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 445 - 494
Target Start/End: Complemental strand, 8851211 - 8851159
Alignment:
Q  445 tttcagaattatacaacc---atttagagaaagttagtcccacccttacctta 494  Q
    |||||||||||||||||    | ||||||||||||||||||||||||||||||    
T  8851211 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 8851159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 445 - 494
Target Start/End: Original strand, 12372274 - 12372326
Alignment:
Q  445 tttcagaattatacaacc---atttagagaaagttagtcccacccttacctta 494  Q
    |||||||||||||||||    | ||||||||||||||||||||||||||||||    
T  12372274 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 12372326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 445 - 494
Target Start/End: Complemental strand, 12465312 - 12465260
Alignment:
Q  445 tttcagaattatacaacc---atttagagaaagttagtcccacccttacctta 494  Q
    |||||||||||||||||    | ||||||||||||||||||||||||||||||    
T  12465312 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 12465260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 465 - 495
Target Start/End: Complemental strand, 12754641 - 12754611
Alignment:
Q  465 ttagagaaagttagtcccacccttaccttag 495  Q
    |||||||||||||||||||||||||||||||    
T  12754641 ttagagaaagttagtcccacccttaccttag 12754611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 407 - 495
Target Start/End: Original strand, 21661219 - 21661309
Alignment:
Q  407 aacatcaaaactaacaacaactacaaagttaaacactttttcagaattatacaac-cat-ttagagaaagttagtcccacccttaccttag 495  Q
    ||||||| || || |||||||  ||||||||  | |||||||||||||||| ||| ||| ||| |||| ||||||||||||||||||||||    
T  21661219 aacatcacaattatcaacaacatcaaagttagcccctttttcagaattatataactcatattaaagaaggttagtcccacccttaccttag 21661309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 421 - 483
Target Start/End: Original strand, 34958321 - 34958386
Alignment:
Q  421 caacaactacaaagttaaacactttttcagaattatacaac-ca--tttagagaaagttagtccca 483  Q
    |||||||||||| ||||||  |||||||||||||||||||| ||  ||||||||||| ||||||||    
T  34958321 caacaactacaatgttaaatcctttttcagaattatacaactcatctttagagaaagctagtccca 34958386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 465 - 495
Target Start/End: Complemental strand, 35771470 - 35771440
Alignment:
Q  465 ttagagaaagttagtcccacccttaccttag 495  Q
    |||||||||||||||||||||||||||||||    
T  35771470 ttagagaaagttagtcccacccttaccttag 35771440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 465 - 495
Target Start/End: Complemental strand, 48807354 - 48807324
Alignment:
Q  465 ttagagaaagttagtcccacccttaccttag 495  Q
    |||||||||||||||||||||||||||||||    
T  48807354 ttagagaaagttagtcccacccttaccttag 48807324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 494
Target Start/End: Original strand, 16078353 - 16078382
Alignment:
Q  465 ttagagaaagttagtcccacccttacctta 494  Q
    ||||||||||||||||||||||||||||||    
T  16078353 ttagagaaagttagtcccacccttacctta 16078382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 64; Significance: 9e-28; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 392 - 495
Target Start/End: Complemental strand, 21335371 - 21335265
Alignment:
Q  392 aaccctaatctctataacatcaaaactaacaacaactacaaagttaaacactttttcagaattatacaa-ccat--ttagagaaagttagtcccaccctt 488  Q
    |||| |||| ||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||| ||||  |||||||||| |||||||||||||    
T  21335371 aaccataatttctataacatcaaaactaataacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtcccaccctt 21335272  T
Q  489 accttag 495  Q
    |||||||    
T  21335271 accttag 21335265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 397 - 495
Target Start/End: Complemental strand, 21315576 - 21315475
Alignment:
Q  397 taatctctataacatcaaaactaacaacaactacaaagttaaacactttttcagaattatacaa-ccat--ttagagaaagttagtcccacccttacctt 493  Q
    |||| ||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||| ||||  |||||||||| ||||||||||||||||||    
T  21315576 taatttctataacatcaaaactaataacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtcccacccttacctt 21315477  T
Q  494 ag 495  Q
    ||    
T  21315476 ag 21315475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 404 - 520
Target Start/End: Complemental strand, 34491337 - 34491214
Alignment:
Q  404 tataacatcaaaacta----acaacaactacaaagttaaacactttttcagaattatacaacc----atttagagaaagttagtcccacccttaccttag 495  Q
    ||||||||||||||||    |||||||| || | ||||||| ||||||||||||||||||||     |||||||||| | ||||||||||||||||||||    
T  34491337 tataacatcaaaactacaaaacaacaacaaccatgttaaaccctttttcagaattatacaactcgttatttagagaa-gctagtcccacccttaccttag 34491239  T
Q  496 tattgatgatcggcggtctctctcc 520  Q
    |||||||||||||||||||||||||    
T  34491238 tattgatgatcggcggtctctctcc 34491214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 392 - 508
Target Start/End: Original strand, 21369240 - 21369359
Alignment:
Q  392 aaccctaatctctataacatcaaaactaacaacaactacaaagttaaacactttttcagaattatacaa-ccat--ttagagaaagttagtcccaccctt 488  Q
    ||||||||| ||||||||||||||||||| |  |||||||| ||||||| ||||||||||||||||||| ||||  |||||||||| | |||||||||||    
T  21369240 aaccctaatttctataacatcaaaactaatataaactacaaggttaaaccctttttcagaattatacaacccattgttagagaaagcttgtcccaccctt 21369339  T
Q  489 accttagtattgatgatcgg 508  Q
    |||||||  | |||||||||    
T  21369340 accttagattagatgatcgg 21369359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 367 - 423
Target Start/End: Original strand, 29601946 - 29602002
Alignment:
Q  367 cccttcactacccatatgttcatacaaccctaatctctataacatcaaaactaacaa 423  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29601946 cccttcactacccatatgttcatacaaccctaatctctataacatcaaaactaacaa 29602002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 465 - 520
Target Start/End: Original strand, 357904 - 357959
Alignment:
Q  465 ttagagaaagttagtcccacccttaccttagtattgatgatcggcggtctctctcc 520  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  357904 ttagagaaagttagtcccacccttaccttagtattgatgatcggcggtctctctcc 357959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 465 - 520
Target Start/End: Complemental strand, 21080998 - 21080943
Alignment:
Q  465 ttagagaaagttagtcccacccttaccttagtattgatgatcggcggtctctctcc 520  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21080998 ttagagaaagttagtcccacccttaccttagtattgatgatcggcggtctctctcc 21080943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 392 - 495
Target Start/End: Original strand, 23610573 - 23610679
Alignment:
Q  392 aaccctaatctctataacatcaaaactaacaacaactacaaagttaaacactttttcagaattatacaa-ccat--ttagagaaagttagtcccaccctt 488  Q
    ||||||||| |||||||||||||||| ||||||||||| || |||||||  ||||||| |||||||||| ||||  |||||||||| |||||||||||||    
T  23610573 aaccctaatttctataacatcaaaacaaacaacaactagaaggttaaaccatttttcataattatacaacccattattagagaaagctagtcccaccctt 23610672  T
Q  489 accttag 495  Q
    |||||||    
T  23610673 accttag 23610679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 465 - 520
Target Start/End: Original strand, 21915647 - 21915702
Alignment:
Q  465 ttagagaaagttagtcccacccttaccttagtattgatgatcggcggtctctctcc 520  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||    
T  21915647 ttagagaaagttagtcacacccttactttagtattgatgatcggcggtctctctcc 21915702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 465 - 520
Target Start/End: Original strand, 25184212 - 25184267
Alignment:
Q  465 ttagagaaagttagtcccacccttaccttagtattgatgatcggcggtctctctcc 520  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  25184212 ttagagaaagttagtctcacccttaccttagtattgatgattggcggtctctctcc 25184267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 445 - 519
Target Start/End: Original strand, 40912320 - 40912397
Alignment:
Q  445 tttcagaattatacaacc---atttagagaaagttagtcccacccttaccttagtattgatgatcggcggtctctctc 519  Q
    |||||||||||||||||    | ||||||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  40912320 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttagtattgatgatcggttgtctctctc 40912397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 474 - 520
Target Start/End: Complemental strand, 34858212 - 34858166
Alignment:
Q  474 gttagtcccacccttaccttagtattgatgatcggcggtctctctcc 520  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  34858212 gttagtcccacccttaccttagtattgatgatcggcggtctctctcc 34858166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 474 - 520
Target Start/End: Complemental strand, 34873274 - 34873228
Alignment:
Q  474 gttagtcccacccttaccttagtattgatgatcggcggtctctctcc 520  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  34873274 gttagtcccacccttaccttagtattgatgatcggcggtctctctcc 34873228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 392 - 455
Target Start/End: Complemental strand, 28652657 - 28652593
Alignment:
Q  392 aaccctaatctctataacatcaaaactaacaacaactacaaa-gttaaacactttttcagaatta 455  Q
    ||||||||| |||||||||||||||||||||||||||||||| | ||||| ||||||||||||||    
T  28652657 aaccctaatttctataacatcaaaactaacaacaactacaaaggctaaaccctttttcagaatta 28652593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 469 - 520
Target Start/End: Complemental strand, 27484514 - 27484463
Alignment:
Q  469 agaaagttagtcccacccttaccttagtattgatgatcggcggtctctctcc 520  Q
    |||||||||||| ||||||||||||||||||||||||||| ||| |||||||    
T  27484514 agaaagttagtctcacccttaccttagtattgatgatcggtggtatctctcc 27484463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 392 - 457
Target Start/End: Complemental strand, 25584367 - 25584302
Alignment:
Q  392 aaccctaatctctataacatcaaaactaacaacaactacaaagttaaacactttttcagaattata 457  Q
    ||||||||  |||||||||||||||||| || |||| |||| ||||||| ||||||||||||||||    
T  25584367 aaccctaacttctataacatcaaaactatcatcaacgacaaggttaaaccctttttcagaattata 25584302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 402 - 495
Target Start/End: Complemental strand, 20006065 - 20005970
Alignment:
Q  402 tctataacatcaaaactaacaacaactacaaagttaaacactttttcagaattatacaaccat--ttagagaaagttagtcccacccttaccttag 495  Q
    ||||||||||||||| ||  |||||| ||||| |||||| |||||||||||||||| |  |||  ||| |||| | ||||||||||||||||||||    
T  20006065 tctataacatcaaaattattaacaacaacaaaattaaaccctttttcagaattatagactcatgattaaagaaggctagtcccacccttaccttag 20005970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 445 - 508
Target Start/End: Original strand, 17307486 - 17307552
Alignment:
Q  445 tttcagaattatacaacc---atttagagaaagttagtcccacccttaccttagtattgatgatcgg 508  Q
    |||||||||||||||||    | |||||||||||||||||||||||||||||||  | |||||||||    
T  17307486 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttagattagatgatcgg 17307552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 465 - 508
Target Start/End: Original strand, 22501994 - 22502037
Alignment:
Q  465 ttagagaaagttagtcccacccttaccttagtattgatgatcgg 508  Q
    |||||||||||||||||||||||||||||||  | |||||||||    
T  22501994 ttagagaaagttagtcccacccttaccttagattagatgatcgg 22502037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 465 - 508
Target Start/End: Original strand, 22509928 - 22509971
Alignment:
Q  465 ttagagaaagttagtcccacccttaccttagtattgatgatcgg 508  Q
    |||||||||||||||||||||||||||||||  | |||||||||    
T  22509928 ttagagaaagttagtcccacccttaccttagattagatgatcgg 22509971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 445 - 495
Target Start/End: Original strand, 24516186 - 24516239
Alignment:
Q  445 tttcagaattatacaacc---atttagagaaagttagtcccacccttaccttag 495  Q
    |||||||||||||||||    | |||||||||||||||||||||||||||||||    
T  24516186 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttag 24516239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 465 - 495
Target Start/End: Original strand, 3539860 - 3539890
Alignment:
Q  465 ttagagaaagttagtcccacccttaccttag 495  Q
    |||||||||||||||||||||||||||||||    
T  3539860 ttagagaaagttagtcccacccttaccttag 3539890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 445 - 494
Target Start/End: Complemental strand, 5031181 - 5031129
Alignment:
Q  445 tttcagaattatacaacc---atttagagaaagttagtcccacccttacctta 494  Q
    |||||||||||||||||    | ||||||||||||||||||||||||||||||    
T  5031181 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 5031129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 445 - 494
Target Start/End: Complemental strand, 24780892 - 24780840
Alignment:
Q  445 tttcagaattatacaacc---atttagagaaagttagtcccacccttacctta 494  Q
    |||||||||||||||||    | ||||||||||||||||||||||||||||||    
T  24780892 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 24780840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 465 - 495
Target Start/End: Original strand, 25142227 - 25142257
Alignment:
Q  465 ttagagaaagttagtcccacccttaccttag 495  Q
    |||||||||||||||||||||||||||||||    
T  25142227 ttagagaaagttagtcccacccttaccttag 25142257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 465 - 495
Target Start/End: Original strand, 27852691 - 27852721
Alignment:
Q  465 ttagagaaagttagtcccacccttaccttag 495  Q
    |||||||||||||||||||||||||||||||    
T  27852691 ttagagaaagttagtcccacccttaccttag 27852721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 494
Target Start/End: Complemental strand, 2523776 - 2523747
Alignment:
Q  465 ttagagaaagttagtcccacccttacctta 494  Q
    ||||||||||||||||||||||||||||||    
T  2523776 ttagagaaagttagtcccacccttacctta 2523747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 457
Target Start/End: Original strand, 19647181 - 19647246
Alignment:
Q  392 aaccctaatctctataacatcaaaactaacaacaactacaaagttaaacactttttcagaattata 457  Q
    ||||||||  ||||||  ||||||||||  |||||||||||  |||||| ||||||||||||||||    
T  19647181 aaccctaacttctatacaatcaaaactattaacaactacaagattaaaccctttttcagaattata 19647246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 61; Significance: 6e-26; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 403 - 495
Target Start/End: Original strand, 2839 - 2934
Alignment:
Q  403 ctataacatcaaaactaacaacaactacaaagttaaacactttttcagaattatacaa-ccat--ttagagaaagttagtcccacccttaccttag 495  Q
    |||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||| ||||  |||||||||| ||||||||||||||||||||    
T  2839 ctataacatcgaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtcccacccttaccttag 2934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 61; Significance: 6e-26; HSPs: 2)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 392 - 495
Target Start/End: Original strand, 19154 - 19260
Alignment:
Q  392 aaccctaatctctataacatcaaaactaacaacaactacaaagttaaacactttttcagaattatacaac---catttagagaaagttagtcccaccctt 488  Q
    |||||| || ||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||    | ||||||||||||||||||||||||    
T  19154 aacccttatttctataacatcaaaactaataacaactacaaggttaaaccctttttcagaattatacaacttagaattagagaaagttagtcccaccctt 19253  T
Q  489 accttag 495  Q
    || ||||    
T  19254 acgttag 19260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 402 - 440
Target Start/End: Original strand, 19118 - 19156
Alignment:
Q  402 tctataacatcaaaactaacaacaactacaaagttaaac 440  Q
    |||||||||||||||||| |||||||||||| |||||||    
T  19118 tctataacatcaaaactatcaacaactacaaggttaaac 19156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 392 - 495
Target Start/End: Complemental strand, 15720 - 15615
Alignment:
Q  392 aaccctaatctctataacatcaaaactaacaacaactacaaagttaaacactttttcagaattatac-aaccat--ttagagaaagttagtcccaccctt 488  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||| ||||| |||| ||||||  |||||| |||||||||||||||||    
T  15720 aaccctaatttctataacatcaaaactaacaacaactacaaggttaaacccttttttagaatcatacaaaccattattagag-aagttagtcccaccctt 15622  T
Q  489 accttag 495  Q
    |||||||    
T  15621 accttag 15615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 392 - 495
Target Start/End: Complemental strand, 17626 - 17520
Alignment:
Q  392 aaccctaatctctataacatcaaaactaacaacaactacaaagttaaacactttttcagaattatacaa-ccat--ttagagaaagttagtcccaccctt 488  Q
    ||||||||| ||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||||| ||||  ||||| |||| |||||| ||||||    
T  17626 aaccctaatttctataacagcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaatccattattagaaaaagctagtccgaccctt 17527  T
Q  489 accttag 495  Q
    |||||||    
T  17526 accttag 17520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 392 - 495
Target Start/End: Original strand, 18222 - 18328
Alignment:
Q  392 aaccctaatctctataacatcaaaactaacaacaactacaaagttaaacactttttcagaattatacaa-ccat--ttagagaaagttagtcccaccctt 488  Q
    ||||||||| ||||||| |||||||| |||||||||||||| ||||||| ||||||||||||||||||| ||||  |||||||||| ||||| |||||||    
T  18222 aaccctaatttctataaaatcaaaaccaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtcacaccctt 18321  T
Q  489 accttag 495  Q
    |||||||    
T  18322 accttag 18328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 56; Significance: 6e-23; HSPs: 2)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 465 - 520
Target Start/End: Original strand, 21120 - 21175
Alignment:
Q  465 ttagagaaagttagtcccacccttaccttagtattgatgatcggcggtctctctcc 520  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21120 ttagagaaagttagtcccacccttaccttagtattgatgatcggcggtctctctcc 21175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 465 - 520
Target Start/End: Original strand, 34135 - 34190
Alignment:
Q  465 ttagagaaagttagtcccacccttaccttagtattgatgatcggcggtctctctcc 520  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34135 ttagagaaagttagtcccacccttaccttagtattgatgatcggcggtctctctcc 34190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1256 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold1256
Description:

Target: scaffold1256; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 410 - 495
Target Start/End: Complemental strand, 2287 - 2199
Alignment:
Q  410 atcaaaactaacaacaactacaaagttaaacactttttcagaattatacaac---catttagagaaagttagtcccacccttaccttag 495  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||||||||    | ||||||||| |||||||||||||||||||||    
T  2287 atcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacttagaattagagaaaattagtcccacccttaccttag 2199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 392 - 494
Target Start/End: Original strand, 1023 - 1128
Alignment:
Q  392 aaccctaatctctataacatcaaaactaacaacaactacaaagttaaacactttttcagaattatacaa-ccat--ttagagaaagttagtcccaccctt 488  Q
    |||| |||| |||| ||||||||||||||||||| |||||| ||||||| ||||||||||||||||||| ||||  |||||||||| ||||| |||||||    
T  1023 aaccataatttctaaaacatcaaaactaacaacatctacaaggttaaaccctttttcagaattatacaatccattattagagaaagctagtctcaccctt 1122  T
Q  489 acctta 494  Q
    ||||||    
T  1123 acctta 1128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 409 - 495
Target Start/End: Complemental strand, 14674 - 14585
Alignment:
Q  409 catcaaaactaacaacaactacaaagttaaacactttttcagaattatacaa-ccat--ttagagaaagttagtcccacccttaccttag 495  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||||||| ||||  |||||||||| ||||| ||||||||||||||    
T  14674 catcaaaactaacaacaactacaaatttaaaccctttttcagaattatacaacccattattagagaaagctagtctcacccttaccttag 14585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 409 - 495
Target Start/End: Complemental strand, 23732 - 23643
Alignment:
Q  409 catcaaaactaacaacaactacaaagttaaacactttttcagaattatacaa-ccat--ttagagaaagttagtcccacccttaccttag 495  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||||||| ||||  |||||||||| ||||| ||||||||||||||    
T  23732 catcaaaactaacaacaactacaaatttaaaccctttttcagaattatacaacccattattagagaaagctagtctcacccttaccttag 23643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 53; Significance: 3e-21; HSPs: 2)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 407 - 495
Target Start/End: Original strand, 13911 - 14002
Alignment:
Q  407 aacatcaaaactaacaacaactacaaagttaaacactttttcagaattatacaa-ccat--ttagagaaagttagtcccacccttaccttag 495  Q
    |||||||||||||||||||||| ||| ||||||| ||||||||||||| ||||| ||||  |||||||||| ||||||||||||||||||||    
T  13911 aacatcaaaactaacaacaacttcaaggttaaaccctttttcagaattttacaacccattattagagaaagctagtcccacccttaccttag 14002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 465 - 495
Target Start/End: Original strand, 19977 - 20007
Alignment:
Q  465 ttagagaaagttagtcccacccttaccttag 495  Q
    |||||||||||||||||||||||||||||||    
T  19977 ttagagaaagttagtcccacccttaccttag 20007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 465 - 520
Target Start/End: Original strand, 5052 - 5107
Alignment:
Q  465 ttagagaaagttagtcccacccttaccttagtattgatgatcggcggtctctctcc 520  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  5052 ttagagaaagttagtcccacccttaccttagtattgatgatcggcagtctctctcc 5107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 465 - 520
Target Start/End: Original strand, 5052 - 5107
Alignment:
Q  465 ttagagaaagttagtcccacccttaccttagtattgatgatcggcggtctctctcc 520  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  5052 ttagagaaagttagtcccacccttaccttagtattgatgatcggcagtctctctcc 5107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 392 - 495
Target Start/End: Original strand, 28498 - 28604
Alignment:
Q  392 aaccctaatctctataacatcaaaactaacaacaactacaaa-gttaaacactttttcagaattatacaaccat--ttagagaaagttagtcccaccctt 488  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||||| |||||||||||||||| |  |||  |||  ||| ||||||||||| |||    
T  28498 aaccctaatctctataacataaaaactaacaacaactacaaaggttaaaccctttttcagaattatatactcatgattaaggaaggttagtcccactctt 28597  T
Q  489 accttag 495  Q
    |||||||    
T  28598 accttag 28604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 465 - 520
Target Start/End: Original strand, 6391 - 6446
Alignment:
Q  465 ttagagaaagttagtcccacccttaccttagtattgatgatcggcggtctctctcc 520  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  6391 ttagagaaagttagtcccacccttacattagtattgatgatcggcggtctctctcc 6446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 395 - 495
Target Start/End: Complemental strand, 59757 - 59655
Alignment:
Q  395 cctaatctctataacatcaaaactaacaacaactacaaagttaaacactttttcagaattatacaaccat--ttagagaaagttagtcccacccttacct 492  Q
    |||||| ||||||| |||||||||| |||||||||||||||||||| |||||||||||||||| |  |||  ||| |||| ||||| |||||||||||||    
T  59757 cctaatttctataatatcaaaactatcaacaactacaaagttaaaccctttttcagaattatatactcatgattaaagaaggttagacccacccttacct 59658  T
Q  493 tag 495  Q
    |||    
T  59657 tag 59655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 465 - 520
Target Start/End: Complemental strand, 69882 - 69827
Alignment:
Q  465 ttagagaaagttagtcccacccttaccttagtattgatgatcggcggtctctctcc 520  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  69882 ttagagaaagttagtcccacccttaccttagtattgatgatcggcagtctctctcc 69827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0853 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0853
Description:

Target: scaffold0853; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 392 - 494
Target Start/End: Complemental strand, 2561 - 2454
Alignment:
Q  392 aaccctaatctctataacatcaaaactaacaacaactacaaagttaaac--actttttcagaattatacaa-ccat--ttagagaaagttagtcccaccc 486  Q
    ||||||||| ||||||||||||||||||| ||| ||||||| |||||||    |||||||||||||||||| ||||  |||||||||| |||||||||||    
T  2561 aaccctaatttctataacatcaaaactaataacgactacaaggttaaaccatttttttcagaattatacaacccattattagagaaagctagtcccaccc 2462  T
Q  487 ttacctta 494  Q
    ||||||||    
T  2461 ttacctta 2454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 404 - 508
Target Start/End: Complemental strand, 61940 - 61834
Alignment:
Q  404 tataacatcaaaactaacaacaactacaaagttaaacactttttcagaattatacaac---catttagagaaagttagtcccacccttaccttagtattg 500  Q
    ||||||||||||||||||||||||||||| ||||||  | ||||||||||||||||||    | |||||||||||||||| ||||||||||||||  | |    
T  61940 tataacatcaaaactaacaacaactacaaggttaaa-tccttttcagaattatacaacttagaattagagaaagttagtctcacccttaccttagattag 61842  T
Q  501 atgatcgg 508  Q
    ||||||||    
T  61841 atgatcgg 61834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 49; Significance: 8e-19; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 402 - 495
Target Start/End: Original strand, 3162 - 3257
Alignment:
Q  402 tctataacatcaaaactaacaacaactacaaagttaaacactttttcagaattatacaaccat--ttagagaaagttagtcccacccttaccttag 495  Q
    |||||||||||||||||| ||||||||||||| |||||| |||||||| ||||||| |  |||  ||| |||| ||||||||||||||||||||||    
T  3162 tctataacatcaaaactatcaacaactacaaaattaaaccctttttcataattatatactcatgattaaagaaggttagtcccacccttaccttag 3257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 49; Significance: 8e-19; HSPs: 4)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 392 - 495
Target Start/End: Complemental strand, 16525 - 16418
Alignment:
Q  392 aaccctaatctctataa-catcaaaactaacaacaactacaaagttaaacactttttcagaattatacaa-ccat--ttagagaaagttagtcccaccct 487  Q
    ||||||||| ||| ||| ||||||| |||||||||||||||| ||||||| ||||||||||||||||||| ||||  ||||| ||||||| || ||||||    
T  16525 aaccctaatttctctaatcatcaaacctaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagataaagttaatctcaccct 16426  T
Q  488 taccttag 495  Q
    ||||||||    
T  16425 taccttag 16418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 417 - 495
Target Start/End: Complemental strand, 18781 - 18700
Alignment:
Q  417 ctaacaacaactacaaagttaaacactttttcagaattatacaac-cat--ttagagaaagttagtcccacccttaccttag 495  Q
    |||||||||||||||| | |||||  ||||| ||||||||||||| |||  ||||||||||||| ||||||||| |||||||    
T  18781 ctaacaacaactacaaggctaaaccgtttttaagaattatacaactcattattagagaaagttaatcccaccctcaccttag 18700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 392 - 452
Target Start/End: Complemental strand, 16679 - 16619
Alignment:
Q  392 aaccctaatctctataacatcaaaactaacaacaactacaaagttaaacactttttcagaa 452  Q
    ||||||||  |||||| ||||||||||| ||||||||| ||| |||||| |||||||||||    
T  16679 aaccctaacttctatagcatcaaaactatcaacaactataaaattaaactctttttcagaa 16619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 392 - 452
Target Start/End: Complemental strand, 18962 - 18902
Alignment:
Q  392 aaccctaatctctataacatcaaaactaacaacaactacaaagttaaacactttttcagaa 452  Q
    ||||||||  |||||| ||||||||||| ||||||||||||| ||||||  ||||||||||    
T  18962 aaccctaacttctatagcatcaaaactatcaacaactacaaaattaaaccttttttcagaa 18902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 48; Significance: 3e-18; HSPs: 3)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 465 - 520
Target Start/End: Original strand, 11246 - 11301
Alignment:
Q  465 ttagagaaagttagtcccacccttaccttagtattgatgatcggcggtctctctcc 520  Q
    |||||||||||||| | |||||||||||||||||||||||||||||||||||||||    
T  11246 ttagagaaagttagactcacccttaccttagtattgatgatcggcggtctctctcc 11301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 392 - 440
Target Start/End: Original strand, 1264 - 1312
Alignment:
Q  392 aaccctaatctctataacatcaaaactaacaacaactacaaagttaaac 440  Q
    |||||| || |||||||||||||||||| ||||||||| || |||||||    
T  1264 aacccttatttctataacatcaaaactatcaacaactataaggttaaac 1312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 392 - 440
Target Start/End: Original strand, 6770 - 6818
Alignment:
Q  392 aaccctaatctctataacatcaaaactaacaacaactacaaagttaaac 440  Q
    |||||| || |||||||||||||||||| ||||||||| || |||||||    
T  6770 aacccttatttctataacatcaaaactatcaacaactataaggttaaac 6818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0436 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0436
Description:

Target: scaffold0436; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 465 - 520
Target Start/End: Original strand, 8983 - 9038
Alignment:
Q  465 ttagagaaagttagtcccacccttaccttagtattgatgatcggcggtctctctcc 520  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  8983 ttagagaaagttagtcccacccttaccttagtattgatgatcggtggtcactctcc 9038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 465 - 520
Target Start/End: Original strand, 15295 - 15350
Alignment:
Q  465 ttagagaaagttagtcccacccttaccttagtattgatgatcggcggtctctctcc 520  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  15295 ttagagaaagttagtcccacccttaccttagtaatgatgatcggcgatctctctcc 15350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 465 - 520
Target Start/End: Complemental strand, 21806 - 21751
Alignment:
Q  465 ttagagaaagttagtcccacccttaccttagtattgatgatcggcggtctctctcc 520  Q
    ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  21806 ttagagaaagttagtcccatccttaccttagtattgatgatcggtggtctctctcc 21751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 465 - 520
Target Start/End: Complemental strand, 29245 - 29190
Alignment:
Q  465 ttagagaaagttagtcccacccttaccttagtattgatgatcggcggtctctctcc 520  Q
    |||||||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  29245 ttagagaaagttagtcccactcttaccttagtattgatgatcgacggtctctctcc 29190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0577 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0577
Description:

Target: scaffold0577; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 474 - 520
Target Start/End: Original strand, 9091 - 9137
Alignment:
Q  474 gttagtcccacccttaccttagtattgatgatcggcggtctctctcc 520  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  9091 gttagtcccacccttaccttagtattgatgatcggcggtctctctcc 9137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 407 - 508
Target Start/End: Complemental strand, 18731 - 18626
Alignment:
Q  407 aacatcaaaactaacaacaactacaaagttaaacactttttcagaatta-tacaac-cat--ttagagaaagttagtcccacccttaccttagtattgat 502  Q
    |||||||||||||||||||||||||| |||||||  ||||||| ||||| |||||| |||  |||||||||| ||||||||||||||||||||  | |||    
T  18731 aacatcaaaactaacaacaactacaaggttaaaccttttttcaaaattattacaactcattattagagaaagctagtcccacccttaccttagattagat 18632  T
Q  503 gatcgg 508  Q
    ||||||    
T  18631 gatcgg 18626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 414 - 516
Target Start/End: Original strand, 23503 - 23608
Alignment:
Q  414 aaactaacaacaactacaaagttaaacactttttcagaattatacaacc-att--tagagaaagttagtcccacccttaccttagtattgatgatcggcg 510  Q
    ||||||||||||||| ||| ||| ||| | |||| ||| |||||||||| |||  ||||||||| |||||| |||||||||||||||||||||||||||     
T  23503 aaactaacaacaactgcaaggtttaacccctttttagatttatacaacccattattagagaaagctagtcctacccttaccttagtattgatgatcggca 23602  T
Q  511 gtctct 516  Q
    ||||||    
T  23603 gtctct 23608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 392 - 495
Target Start/End: Complemental strand, 40268 - 40160
Alignment:
Q  392 aaccctaatctctataacatcaaaactaacaacaactacaaagttaaacactttttcaga---attatacaaccat--ttagagaaagttagtcccaccc 486  Q
    ||||||||  |||||||||||||||||| |||||||||||  ||||||| |||||| |||   |||||| |  |||  |||||||| |||||||||||||    
T  40268 aaccctaacttctataacatcaaaactatcaacaactacatggttaaacccttttttagaattattatatactcatgattagagaaggttagtcccaccc 40169  T
Q  487 ttaccttag 495  Q
    |||||||||    
T  40168 ttaccttag 40160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153 (Bit Score: 46; Significance: 5e-17; HSPs: 2)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 474 - 519
Target Start/End: Original strand, 5329 - 5374
Alignment:
Q  474 gttagtcccacccttaccttagtattgatgatcggcggtctctctc 519  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  5329 gttagtcccacccttaccttagtattgatgatcggcggtctctctc 5374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 474 - 519
Target Start/End: Original strand, 12349 - 12394
Alignment:
Q  474 gttagtcccacccttaccttagtattgatgatcggcggtctctctc 519  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  12349 gttagtcccacccttaccttagtattgatgatcggcggtctctctc 12394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0394 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 402 - 495
Target Start/End: Complemental strand, 7608 - 7513
Alignment:
Q  402 tctataacatcaaaactaacaacaactacaaagttaaacactttttcagaattatacaaccat--ttagagaaagttagtcccacccttaccttag 495  Q
    |||||||||||||||||| ||||||||| ||| |||||| |||||||||||| ||| |  |||  ||| |||| ||||||||||||||||||||||    
T  7608 tctataacatcaaaactatcaacaactataaaattaaaccctttttcagaatcatatactcataattaaagaaggttagtcccacccttaccttag 7513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 402 - 495
Target Start/End: Complemental strand, 38536 - 38441
Alignment:
Q  402 tctataacatcaaaactaacaacaactacaaagttaaacactttttcagaattatacaaccat--ttagagaaagttagtcccacccttaccttag 495  Q
    ||||||||||||||||||  |||||||||||| |||||| |||||||||||||||| |  |||  ||| |||| ||||||| ||||||||||||||    
T  38536 tctataacatcaaaactattaacaactacaaaattaaaccctttttcagaattatatactcatgattaaagaaggttagtcacacccttaccttag 38441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 44; Significance: 8e-16; HSPs: 3)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 465 - 520
Target Start/End: Original strand, 1960 - 2015
Alignment:
Q  465 ttagagaaagttagtcccacccttaccttagtattgatgatcggcggtctctctcc 520  Q
    ||||| |||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  1960 ttagataaagttagtcccaccctttccttagtattgatgatcggtggtctctctcc 2015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 465 - 495
Target Start/End: Complemental strand, 5074 - 5044
Alignment:
Q  465 ttagagaaagttagtcccacccttaccttag 495  Q
    |||||||||||||||||||||||||||||||    
T  5074 ttagagaaagttagtcccacccttaccttag 5044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 465 - 495
Target Start/End: Complemental strand, 10784 - 10754
Alignment:
Q  465 ttagagaaagttagtcccacccttaccttag 495  Q
    |||||||||||||||||||||||||||||||    
T  10784 ttagagaaagttagtcccacccttaccttag 10754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 392 - 494
Target Start/End: Original strand, 5578 - 5685
Alignment:
Q  392 aaccctaatctctataacatcaaaac-taacaacaactacaaagttaaacacttttt--cagaattatacaacc-att--tagagaaagttagtcccacc 485  Q
    ||||||||| |||| ||||||||||| ||  ||||||||||||||||||| ||||||  ||||||||||||||| |||  ||||||||| ||||||||||    
T  5578 aaccctaat-tctacaacatcaaaacctattaacaactacaaagttaaaccctttttttcagaattatacaacccattattagagaaagctagtcccacc 5676  T
Q  486 cttacctta 494  Q
    |||||||||    
T  5677 cttacctta 5685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 392 - 495
Target Start/End: Complemental strand, 127449 - 127342
Alignment:
Q  392 aaccctaatctctataacatcaaaactaac--aacaactacaaagttaaacactttttcagaattatacaa-ccat--ttagagaaagttagtcccaccc 486  Q
    ||||||||||||||||||||||||||||||  |||||| || | ||||||| | |||| ||||| |||||| ||||  |||||||||| |||||||||||    
T  127449 aaccctaatctctataacatcaaaactaacaaaacaacaac-atgttaaacccctttttagaatcatacaatccattattagagaaagctagtcccaccc 127351  T
Q  487 ttaccttag 495  Q
    |||||||||    
T  127350 ttaccttag 127342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 471 - 520
Target Start/End: Original strand, 1194 - 1243
Alignment:
Q  471 aaagttagtcccacccttaccttagtattgatgatcggcggtctctctcc 520  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  1194 aaagttagtcacacccttaccttagtattgataatcggcggtctctctcc 1243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 421 - 483
Target Start/End: Original strand, 10572 - 10636
Alignment:
Q  421 caacaactacaaagttaaacactttttcagaattatacaacca--tttagagaaagttagtccca 483  Q
    |||||||||||| ||||||| ||||||||||||||||||||||  ||||||||||| ||||||||    
T  10572 caacaactacaatgttaaaccctttttcagaattatacaaccatctttagagaaagctagtccca 10636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0819 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0819
Description:

Target: scaffold0819; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 465 - 520
Target Start/End: Original strand, 5389 - 5444
Alignment:
Q  465 ttagagaaagttagtcccacccttaccttagtattgatgatcggcggtctctctcc 520  Q
    |||| ||| |||||||||||||||||||||| ||| ||||||||||||||||||||    
T  5389 ttagtgaaggttagtcccacccttaccttagaattaatgatcggcggtctctctcc 5444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 397 - 447
Target Start/End: Complemental strand, 6519 - 6468
Alignment:
Q  397 taatctctataacatcaaaactaacaacaactacaaa-gttaaacacttttt 447  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  6519 taatctctataacatcaaaactaacaacaactacaaaggttaaacccttttt 6468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 392 - 447
Target Start/End: Complemental strand, 23987 - 23932
Alignment:
Q  392 aaccctaatctctataacatcaaaactaacaacaactacaaagttaaacacttttt 447  Q
    ||||||||| ||||||||||||||||||| ||||||||||| ||||||| ||||||    
T  23987 aaccctaatttctataacatcaaaactaataacaactacaaggttaaacccttttt 23932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 475 - 520
Target Start/End: Original strand, 14990 - 15035
Alignment:
Q  475 ttagtcccacccttaccttagtattgatgatcggcggtctctctcc 520  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||    
T  14990 ttagtcccaccctcaccttagtattgatgatcgacggtctctctcc 15035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 475 - 520
Target Start/End: Original strand, 17010 - 17055
Alignment:
Q  475 ttagtcccacccttaccttagtattgatgatcggcggtctctctcc 520  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||    
T  17010 ttagtcccaccctcaccttagtattgatgatcgacggtctctctcc 17055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1800 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold1800
Description:

Target: scaffold1800; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 402 - 495
Target Start/End: Original strand, 565 - 660
Alignment:
Q  402 tctataacatcaaaactaacaacaactacaaagttaaacactttttcagaattatacaaccat--ttagagaaagttagtcccacccttaccttag 495  Q
    ||||||||||||||| || ||||||| ||||| ||||||  ||||| ||||||||| |  |||  ||| |||| ||||||||||||||||||||||    
T  565 tctataacatcaaaattatcaacaacaacaaaattaaaccatttttaagaattatagactcatgattaaagaaggttagtcccacccttaccttag 660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0594 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 419 - 495
Target Start/End: Original strand, 2221 - 2300
Alignment:
Q  419 aacaacaactacaaagttaaacactttttcagaattatacaa-ccat--ttagagaaagttagtcccacccttaccttag 495  Q
    ||||||||| || | ||||||| ||||||||||||||||||| ||||  ||| |||||| ||||||||||||||||||||    
T  2221 aacaacaacaactatgttaaaccctttttcagaattatacaacccattattatagaaagctagtcccacccttaccttag 2300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 37; Significance: 0.00000000001; HSPs: 4)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 419 - 494
Target Start/End: Original strand, 11590 - 11668
Alignment:
Q  419 aacaacaactacaaagttaaacactttttcagaattatacaacc---atttagagaaagttagtcccacccttacctta 494  Q
    ||||||||| || | ||||||| |||||||||||||||||||||    |||||||||| ||||||||||||||| ||||    
T  11590 aacaacaacaacgatgttaaaccctttttcagaattatacaacccatttttagagaaatttagtcccacccttatctta 11668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 436 - 495
Target Start/End: Original strand, 5445 - 5507
Alignment:
Q  436 taaacactttttcagaattatacaac-catt--tagagaaagttagtcccacccttaccttag 495  Q
    ||||| |||||||||||||||||||| ||||  ||||||||| ||||||||||||||||||||    
T  5445 taaaccctttttcagaattatacaactcattattagagaaaggtagtcccacccttaccttag 5507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 392 - 508
Target Start/End: Original strand, 19802 - 19922
Alignment:
Q  392 aaccctaatctctataacatcaaaactaac--aacaactacaaagttaaacactttttcagaattatacaa-ccat--ttagagaaagttagtcccaccc 486  Q
    ||||||||| ||||||||||||||||||||  |||||| || | ||||||| | |||| ||||| |||||| ||||  |||||||||  |||||| ||||    
T  19802 aaccctaatttctataacatcaaaactaacaaaacaacaac-atgttaaacccctttttagaatcatacaacccattattagagaaatctagtcctaccc 19900  T
Q  487 ttaccttagtattgatgatcgg 508  Q
    |||||||||  | |||||||||    
T  19901 ttaccttagattagatgatcgg 19922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 474 - 520
Target Start/End: Original strand, 13669 - 13715
Alignment:
Q  474 gttagtcccacccttaccttagtattgatgatcggcggtctctctcc 520  Q
    |||| ||||||||||||| ||||||||||| || |||||||||||||    
T  13669 gttactcccacccttaccgtagtattgatggtcagcggtctctctcc 13715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 402 - 495
Target Start/End: Original strand, 49687 - 49782
Alignment:
Q  402 tctataacatcaaaactaacaacaactacaaagttaaacactttttcagaattatacaaccat--ttagagaaagttagtcccacccttaccttag 495  Q
    |||||||||||||||||| ||||||  | ||| |||||| |||||||||||||||  |  |||  ||| |||| ||||||||||||||||||||||    
T  49687 tctataacatcaaaactatcaacaaaaataaaattaaaccctttttcagaattatggactcatgattaaagaaggttagtcccacccttaccttag 49782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 421 - 483
Target Start/End: Original strand, 361 - 426
Alignment:
Q  421 caacaactacaaagttaaacactttttcagaattatacaacc---atttagagaaagttagtccca 483  Q
    |||||||||||| ||||||| |||||||||||||||||||||    ||||||||||| ||||||||    
T  361 caacaactacaatgttaaaccctttttcagaattatacaacccatctttagagaaagctagtccca 426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 465 - 520
Target Start/End: Original strand, 16627 - 16682
Alignment:
Q  465 ttagagaaagttagtcccacccttaccttagtattgatgatcggcggtctctctcc 520  Q
    ||||| ||| ||||||||||||||  ||||||||||||||||| ||||||||||||    
T  16627 ttagataaatttagtcccaccctttgcttagtattgatgatcgtcggtctctctcc 16682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 36; Significance: 0.00000000005; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 395 - 495
Target Start/End: Original strand, 17057 - 17158
Alignment:
Q  395 cctaatctctataacatcaaaactaacaacaactacaaagttaaacactttttcagaattatacaaccat--ttagagaaagttagtcccacccttacct 492  Q
    |||||| ||||||| |||||| ||| |||||||||||||||||||| |||||| ||||||||| |  |||  ||| ||||  || |||||||||||||||    
T  17057 cctaatttctataatatcaaa-ctatcaacaactacaaagttaaaccctttttaagaattatatactcatgattaaagaagattcgtcccacccttacct 17155  T
Q  493 tag 495  Q
    |||    
T  17156 tag 17158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 395 - 495
Target Start/End: Original strand, 26588 - 26689
Alignment:
Q  395 cctaatctctataacatcaaaactaacaacaactacaaagttaaacactttttcagaattatacaaccat--ttagagaaagttagtcccacccttacct 492  Q
    |||||| ||||||| |||||| ||| |||||||||||||||||||| |||||| ||||||||| |  |||  ||| ||||  || |||||||||||||||    
T  26588 cctaatttctataatatcaaa-ctatcaacaactacaaagttaaaccctttttaagaattatatactcatgattaaagaagattcgtcccacccttacct 26686  T
Q  493 tag 495  Q
    |||    
T  26687 tag 26689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1939 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold1939
Description:

Target: scaffold1939; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 392 - 495
Target Start/End: Original strand, 75 - 180
Alignment:
Q  392 aaccctaatctctataacatcaaaactaacaacaactacaaagttaaacactttttcagaa--ttatacaaccatttagagaaagttagtcccaccctta 489  Q
    ||||||||  ||||||||||||||||||  |||||||||||| | |||| |||||||||||   ||||| |    ||| |||| ||||||||||||||||    
T  75 aaccctaacttctataacatcaaaactattaacaactacaaattaaaaccctttttcagaaccatatactaatgattaaagaaggttagtcccaccctta 174  T
Q  490 ccttag 495  Q
    ||||||    
T  175 ccttag 180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 392 - 495
Target Start/End: Original strand, 40053 - 40160
Alignment:
Q  392 aaccctaatctctataacatcaaaactaac--aacaactacaaagttaaacactttttcagaattatacaa-ccat--ttagagaaagttagtcccaccc 486  Q
    ||||||||| ||||||||||||||||||||  |||||| || | ||||||| | |||| ||||| |||||| ||||  |||||||||||||||| || ||    
T  40053 aaccctaatttctataacatcaaaactaacaaaacaacaac-atgttaaacccctttttagaatcatacaacccattattagagaaagttagtcgcatcc 40151  T
Q  487 ttaccttag 495  Q
    |||||||||    
T  40152 ttaccttag 40160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 35; Significance: 0.0000000002; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 419 - 505
Target Start/End: Complemental strand, 66150 - 66061
Alignment:
Q  419 aacaacaactacaaagttaaacactttttcagaattatacaa-ccat--ttagagaaagttagtcccacccttaccttagtattgatgat 505  Q
    ||||||||| || | ||||||| ||||||||||||||||||| ||||  ||| |||||  |||||||||||||||||||| || ||||||    
T  66150 aacaacaacaaccatgttaaaccctttttcagaattatacaacccattattaaagaaatctagtcccacccttaccttagaatagatgat 66061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 465 - 495
Target Start/End: Complemental strand, 328317 - 328287
Alignment:
Q  465 ttagagaaagttagtcccacccttaccttag 495  Q
    |||||||||||||||||||||||||||||||    
T  328317 ttagagaaagttagtcccacccttaccttag 328287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 494
Target Start/End: Original strand, 73110 - 73139
Alignment:
Q  465 ttagagaaagttagtcccacccttacctta 494  Q
    ||||||||||||||||||||||||||||||    
T  73110 ttagagaaagttagtcccacccttacctta 73139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 479 - 520
Target Start/End: Original strand, 1475 - 1516
Alignment:
Q  479 tcccacccttaccttagtattgatgatcggcggtctctctcc 520  Q
    ||||||||||||||||||||||||||||||||| || |||||    
T  1475 tcccacccttaccttagtattgatgatcggcggcctgtctcc 1516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 392 - 494
Target Start/End: Original strand, 10894 - 10999
Alignment:
Q  392 aaccctaatctctataacatcaaaactaac--aacaactacaaagttaaacactttttcagaattatacaa-ccat--ttagagaaagttagtcccaccc 486  Q
    ||||||||| ||||||||||||||||||||  |||||| || | ||||||| |||||| ||||| |||||| ||||  |||||||||| |||| ||||||    
T  10894 aaccctaatttctataacatcaaaactaacaaaacaacaac-atgttaaacccttttt-agaatcatacaacccattattagagaaagctagttccaccc 10991  T
Q  487 ttacctta 494  Q
    ||||||||    
T  10992 ttacctta 10999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1941 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold1941
Description:

Target: scaffold1941; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 445 - 495
Target Start/End: Original strand, 138 - 191
Alignment:
Q  445 tttcagaattatacaacc---atttagagaaagttagtcccacccttaccttag 495  Q
    |||||||||||||||||    | |||||||||||||||||||||||||||||||    
T  138 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttag 191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 445 - 495
Target Start/End: Complemental strand, 13444 - 13391
Alignment:
Q  445 tttcagaattatacaacc---atttagagaaagttagtcccacccttaccttag 495  Q
    |||||||||||||||||    | |||||||||||||||||||||||||||||||    
T  13444 tttcagaattatacaacttggaattagagaaagttagtcccacccttaccttag 13391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 445 - 495
Target Start/End: Original strand, 2889 - 2942
Alignment:
Q  445 tttcagaattatacaacc---atttagagaaagttagtcccacccttaccttag 495  Q
    ||||||||||||||||||   | ||||||||||||| |||||||||||||||||    
T  2889 tttcagaattatacaacctaaaattagagaaagttaatcccacccttaccttag 2942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 465 - 508
Target Start/End: Original strand, 58769 - 58812
Alignment:
Q  465 ttagagaaagttagtcccacccttaccttagtattgatgatcgg 508  Q
    |||||||||||||||||||||||||||||| | | |||||||||    
T  58769 ttagagaaagttagtcccacccttaccttaatttagatgatcgg 58812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 465 - 496
Target Start/End: Complemental strand, 117836 - 117805
Alignment:
Q  465 ttagagaaagttagtcccacccttaccttagt 496  Q
    ||||||||||||||||||||||||||||||||    
T  117836 ttagagaaagttagtcccacccttaccttagt 117805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1633 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold1633
Description:

Target: scaffold1633; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 445 - 494
Target Start/End: Original strand, 1205 - 1257
Alignment:
Q  445 tttcagaattatacaacc---atttagagaaagttagtcccacccttacctta 494  Q
    |||||||||||||||||    | ||||||||||||||||||||||||||||||    
T  1205 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 1257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1283 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold1283
Description:

Target: scaffold1283; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 445 - 494
Target Start/End: Complemental strand, 520 - 468
Alignment:
Q  445 tttcagaattatacaacc---atttagagaaagttagtcccacccttacctta 494  Q
    |||||||||||||||||    | ||||||||||||||||||||||||||||||    
T  520 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 465 - 495
Target Start/End: Complemental strand, 4738 - 4708
Alignment:
Q  465 ttagagaaagttagtcccacccttaccttag 495  Q
    |||||||||||||||||||||||||||||||    
T  4738 ttagagaaagttagtcccacccttaccttag 4708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 392 - 495
Target Start/End: Original strand, 28661 - 28766
Alignment:
Q  392 aaccctaatctctataacatcaaaactaacaacaactacaaagttaaacactttttcagaattatacaaccat--ttagagaaagttagtcccaccctta 489  Q
    |||||||||  ||||||||  |||||||  |||||||||||  |||||| |||||||||||||||| |   ||  ||| |||| ||||||||||| ||||    
T  28661 aaccctaattcctataacaataaaactattaacaactacaagattaaacgctttttcagaattatatacttatgattaaagaaggttagtcccactctta 28760  T
Q  490 ccttag 495  Q
    ||||||    
T  28761 ccttag 28766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 445 - 494
Target Start/End: Complemental strand, 78237 - 78185
Alignment:
Q  445 tttcagaattatacaacc---atttagagaaagttagtcccacccttacctta 494  Q
    |||||||||||||||||    | ||||||||||||||||||||||||||||||    
T  78237 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 78185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 445 - 494
Target Start/End: Complemental strand, 24183 - 24131
Alignment:
Q  445 tttcagaattatacaacc---atttagagaaagttagtcccacccttacctta 494  Q
    |||||||||||||||||    | ||||||||||||||||||||||||||||||    
T  24183 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 24131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1128 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1128
Description:

Target: scaffold1128; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 400
Target Start/End: Original strand, 420 - 453
Alignment:
Q  367 cccttcactacccatatgttcatacaaccctaat 400  Q
    |||||||||||||||||| |||||||||||||||    
T  420 cccttcactacccatatgatcatacaaccctaat 453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 467 - 508
Target Start/End: Complemental strand, 1085 - 1044
Alignment:
Q  467 agagaaagttagtcccacccttaccttagtattgatgatcgg 508  Q
    |||||||||||||||||||||||||||||  | |||||||||    
T  1085 agagaaagttagtcccacccttaccttagattagatgatcgg 1044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 494
Target Start/End: Complemental strand, 225 - 196
Alignment:
Q  465 ttagagaaagttagtcccacccttacctta 494  Q
    ||||||||||||||||||||||||||||||    
T  225 ttagagaaagttagtcccacccttacctta 196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 494
Target Start/End: Original strand, 34362 - 34391
Alignment:
Q  465 ttagagaaagttagtcccacccttacctta 494  Q
    ||||||||||||||||||||||||||||||    
T  34362 ttagagaaagttagtcccacccttacctta 34391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1102 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold1102
Description:

Target: scaffold1102; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 422 - 495
Target Start/End: Complemental strand, 2025 - 1950
Alignment:
Q  422 aacaactacaaagttaaacactttttcagaattatacaaccat--ttagagaaagttagtcccacccttaccttag 495  Q
    |||||| ||||| |||||| |||||||||||||||| |  |||  ||| |||| |||||||||||| |||||||||    
T  2025 aacaacaacaaaattaaaccctttttcagaattatagactcatgattaaagaaggttagtcccaccgttaccttag 1950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 419 - 495
Target Start/End: Complemental strand, 35264 - 35185
Alignment:
Q  419 aacaacaactacaaagttaaacactttttcagaattatacaa-ccat--ttagagaaagttagtcccacccttaccttag 495  Q
    ||||||||| || | ||||||| |||||| |||||||||||| ||||  |||| ||||| |||| |||||||||||||||    
T  35264 aacaacaacaaccatgttaaacccttttttagaattatacaacccattattagggaaagctagtaccacccttaccttag 35185  T

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