View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5246-Insertion-4 (Length: 278)
Name: NF5246-Insertion-4
Description: NF5246
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5246-Insertion-4 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 29 - 278
Target Start/End: Original strand, 12953393 - 12953642
Alignment:
| Q |
29 |
cctcttcctctgattcccactatcaatactaaacttatcaaaacacccatcagacacaacacttgattgcgaaacaaccgccacctccggtgaagcatca |
128 |
Q |
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| T |
12953393 |
cctcttcctctgattcccactatcaatactaaacttatcaaaacacccatcagacacaacacttgattgcgaaacaaccgccacctccggtgaagcatca |
12953492 |
T |
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| Q |
129 |
gaatcaaccaaaaccctaacattacagctctccggcgactgatcaatatcatttccagcagtagtattaggaacactaacagcactctcaaattcctcaa |
228 |
Q |
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||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
12953493 |
gaatcaaccaaaaccctaacattacagctctccggcgaccgatcaatatcatttccagcagtagtattagtaacactaacagcactctcaaattcctcaa |
12953592 |
T |
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| Q |
229 |
caacagaaacagaactataatcctcaacaacaaaatcatctttctttttc |
278 |
Q |
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||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
12953593 |
caacagaaacagaactacaatcctcaacaacaaaatcatctttctttttc |
12953642 |
T |
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