View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5249-Insertion-8 (Length: 250)
Name: NF5249-Insertion-8
Description: NF5249
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5249-Insertion-8 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 244; Significance: 1e-135; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 7 - 250
Target Start/End: Original strand, 31792529 - 31792772
Alignment:
| Q |
7 |
acaaagcagatcttcgtcaccttgtagccgtatcaactgaagatgggaagtcttatgctgagaaagaatcactttatttcatggaaacctcagctctgga |
106 |
Q |
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| T |
31792529 |
acaaagcagatcttcgtcaccttgtagccgtatcaactgaagatgggaagtcttatgctgagaaagaatcactttatttcatggaaacctcagctctgga |
31792628 |
T |
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| Q |
107 |
ggctactaacgtagagaatgcatttgctgaagttctgactcaaatctaccgtattgttagcaagaaagctgtagagggtgctgaaaatggaaacgcgtct |
206 |
Q |
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| T |
31792629 |
ggctactaacgtagagaatgcatttgctgaagttctgactcaaatctaccgtattgttagcaagaaagctgtagagggtgctgaaaatggaaacgcgtct |
31792728 |
T |
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| Q |
207 |
gtgccggccaaaggagagaaaatagatcttaagaatgatgtttc |
250 |
Q |
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| T |
31792729 |
gtgccggccaaaggagagaaaatagatcttaagaatgatgtttc |
31792772 |
T |
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