View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5250_low_15 (Length: 226)

Name: NF5250_low_15
Description: NF5250
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5250_low_15
NF5250_low_15
[»] chr4 (38 HSPs)
chr4 (12-70)||(17315419-17315477)
chr4 (12-69)||(6430746-6430803)
chr4 (12-69)||(23501750-23501807)
chr4 (12-69)||(47528649-47528706)
chr4 (12-69)||(48598944-48599001)
chr4 (18-68)||(14590795-14590845)
chr4 (19-69)||(20224941-20224991)
chr4 (12-66)||(21646924-21646978)
chr4 (13-67)||(30352713-30352767)
chr4 (12-69)||(5306784-5306841)
chr4 (12-69)||(5648216-5648273)
chr4 (12-69)||(10660361-10660418)
chr4 (12-69)||(10874506-10874563)
chr4 (12-69)||(11054267-11054324)
chr4 (12-69)||(16911519-16911576)
chr4 (12-69)||(30639337-30639394)
chr4 (12-69)||(5313115-5313172)
chr4 (12-69)||(13256518-13256575)
chr4 (12-65)||(16408724-16408777)
chr4 (12-69)||(37494808-37494865)
chr4 (12-61)||(47441651-47441699)
chr4 (12-65)||(54966983-54967035)
chr4 (18-69)||(20405050-20405101)
chr4 (12-46)||(17043515-17043549)
chr4 (12-70)||(54730205-54730263)
chr4 (29-69)||(18969698-18969738)
chr4 (12-60)||(49938711-49938759)
chr4 (12-51)||(487256-487295)
chr4 (16-63)||(49938563-49938610)
chr4 (18-69)||(55766593-55766644)
chr4 (12-50)||(25343163-25343201)
chr4 (12-50)||(43035224-43035262)
chr4 (12-61)||(42164269-42164317)
chr4 (12-48)||(23580329-23580365)
chr4 (18-62)||(30496447-30496491)
chr4 (12-48)||(30690304-30690340)
chr4 (18-50)||(44363259-44363291)
chr4 (19-63)||(51420537-51420580)
[»] scaffold0258 (1 HSPs)
scaffold0258 (12-69)||(13144-13201)
[»] chr7 (37 HSPs)
chr7 (12-69)||(32758218-32758275)
chr7 (12-69)||(47077974-47078031)
chr7 (12-69)||(48735242-48735299)
chr7 (12-66)||(40463837-40463891)
chr7 (12-65)||(11617709-11617762)
chr7 (12-69)||(21172128-21172185)
chr7 (12-69)||(42495956-42496013)
chr7 (12-69)||(42798626-42798683)
chr7 (12-69)||(2541140-2541198)
chr7 (19-69)||(5180285-5180335)
chr7 (19-69)||(43557429-43557479)
chr7 (12-69)||(7193042-7193099)
chr7 (12-65)||(10693192-10693245)
chr7 (19-68)||(14732950-14732999)
chr7 (12-69)||(18326991-18327048)
chr7 (12-69)||(42805481-42805538)
chr7 (12-69)||(46354151-46354208)
chr7 (21-69)||(22699100-22699148)
chr7 (17-69)||(29140486-29140538)
chr7 (18-66)||(35334941-35334989)
chr7 (16-63)||(3469304-3469350)
chr7 (12-63)||(28362266-28362316)
chr7 (19-69)||(12473261-12473311)
chr7 (12-61)||(19265781-19265829)
chr7 (12-61)||(19427010-19427059)
chr7 (16-69)||(34626332-34626385)
chr7 (12-64)||(27629596-27629648)
chr7 (12-67)||(7794627-7794682)
chr7 (12-63)||(23419795-23419845)
chr7 (18-69)||(42476830-42476881)
chr7 (23-69)||(25198679-25198725)
chr7 (12-69)||(28078252-28078309)
chr7 (36-69)||(35787383-35787416)
chr7 (12-69)||(47716416-47716473)
chr7 (18-66)||(1424037-1424085)
chr7 (19-51)||(14099134-14099166)
chr7 (19-51)||(14409151-14409183)
[»] chr1 (41 HSPs)
chr1 (12-69)||(18944623-18944680)
chr1 (18-69)||(14617018-14617069)
chr1 (12-69)||(34725217-34725274)
chr1 (12-69)||(45812656-45812713)
chr1 (18-69)||(25290143-25290194)
chr1 (19-69)||(22930195-22930245)
chr1 (12-69)||(27474261-27474318)
chr1 (12-69)||(32632677-32632734)
chr1 (12-69)||(34714603-34714660)
chr1 (12-69)||(40424722-40424779)
chr1 (12-69)||(47214491-47214548)
chr1 (19-67)||(18742089-18742137)
chr1 (18-62)||(33222971-33223015)
chr1 (13-69)||(41319928-41319984)
chr1 (19-69)||(19932880-19932930)
chr1 (12-69)||(8197023-8197080)
chr1 (18-66)||(9939443-9939492)
chr1 (12-69)||(20004213-20004270)
chr1 (12-69)||(23768441-23768498)
chr1 (12-69)||(38478401-38478458)
chr1 (12-69)||(46248074-46248131)
chr1 (12-69)||(46991784-46991841)
chr1 (12-68)||(21006125-21006181)
chr1 (12-63)||(2435908-2435958)
chr1 (12-63)||(6983930-6983980)
chr1 (12-51)||(52910215-52910254)
chr1 (12-62)||(18724666-18724715)
chr1 (12-66)||(30395849-30395903)
chr1 (18-63)||(50811926-50811970)
chr1 (12-68)||(19414420-19414476)
chr1 (12-51)||(2436014-2436053)
chr1 (30-69)||(10668200-10668239)
chr1 (16-63)||(35019217-35019263)
chr1 (12-51)||(35117889-35117928)
chr1 (12-50)||(20036219-20036257)
chr1 (19-69)||(27201627-27201677)
chr1 (13-62)||(4430148-4430197)
chr1 (13-66)||(12126957-12127010)
chr1 (20-69)||(24564324-24564373)
chr1 (30-67)||(45402077-45402114)
chr1 (12-61)||(49546028-49546076)
[»] scaffold0187 (4 HSPs)
scaffold0187 (12-69)||(8902-8959)
scaffold0187 (12-69)||(19230-19287)
scaffold0187 (12-69)||(10169-10226)
scaffold0187 (12-69)||(20497-20554)
[»] scaffold0168 (1 HSPs)
scaffold0168 (12-69)||(30536-30593)
[»] chr8 (25 HSPs)
chr8 (12-69)||(12670369-12670426)
chr8 (12-69)||(30454216-30454273)
chr8 (12-66)||(20869617-20869671)
chr8 (12-69)||(18164880-18164937)
chr8 (12-69)||(24245408-24245465)
chr8 (12-69)||(35261636-35261693)
chr8 (12-69)||(39461117-39461174)
chr8 (12-68)||(20284194-20284250)
chr8 (12-68)||(21070823-21070879)
chr8 (19-69)||(7136657-7136707)
chr8 (12-69)||(2626476-2626533)
chr8 (12-69)||(13160659-13160716)
chr8 (12-69)||(17823533-17823590)
chr8 (12-69)||(28817747-28817804)
chr8 (12-69)||(36720753-36720810)
chr8 (12-68)||(25250480-25250536)
chr8 (12-63)||(28407379-28407430)
chr8 (12-69)||(29521806-29521863)
chr8 (12-69)||(31454145-31454202)
chr8 (12-69)||(44530106-44530163)
chr8 (12-63)||(42083820-42083870)
chr8 (12-63)||(44781627-44781677)
chr8 (12-69)||(45071222-45071279)
chr8 (29-69)||(23286431-23286471)
chr8 (33-69)||(42840866-42840902)
[»] chr6 (19 HSPs)
chr6 (12-69)||(1346921-1346978)
chr6 (12-69)||(1354876-1354933)
chr6 (12-69)||(9161080-9161137)
chr6 (12-69)||(33922949-33923006)
chr6 (12-69)||(3815198-3815255)
chr6 (18-66)||(14975207-14975255)
chr6 (12-68)||(20400625-20400681)
chr6 (18-69)||(8409200-8409251)
chr6 (12-62)||(12222038-12222088)
chr6 (19-68)||(24734591-24734640)
chr6 (18-65)||(13905106-13905152)
chr6 (16-69)||(32728281-32728334)
chr6 (12-51)||(12889401-12889440)
chr6 (19-69)||(15866165-15866215)
chr6 (12-69)||(29355978-29356036)
chr6 (20-69)||(1941812-1941861)
chr6 (12-69)||(12063424-12063481)
chr6 (12-61)||(14553477-14553525)
chr6 (18-62)||(19649294-19649338)
[»] chr5 (19 HSPs)
chr5 (12-69)||(38879538-38879595)
chr5 (12-69)||(43334159-43334216)
chr5 (20-69)||(1565388-1565437)
chr5 (12-69)||(4619227-4619284)
chr5 (12-69)||(24448847-24448904)
chr5 (12-69)||(27328709-27328766)
chr5 (12-69)||(35710270-35710327)
chr5 (12-69)||(37024675-37024732)
chr5 (12-69)||(41014276-41014333)
chr5 (18-69)||(2838735-2838787)
chr5 (12-66)||(8170103-8170157)
chr5 (12-69)||(23974738-23974794)
chr5 (18-69)||(22861793-22861844)
chr5 (19-63)||(10634274-10634317)
chr5 (13-69)||(22187242-22187298)
chr5 (18-69)||(19438706-19438757)
chr5 (12-63)||(39079887-39079937)
chr5 (12-63)||(39301087-39301137)
chr5 (18-67)||(31299591-31299640)
[»] chr3 (28 HSPs)
chr3 (12-69)||(8247810-8247867)
chr3 (12-69)||(10870072-10870129)
chr3 (12-69)||(7697006-7697063)
chr3 (12-69)||(13730725-13730782)
chr3 (12-69)||(39203495-39203552)
chr3 (12-69)||(46421158-46421215)
chr3 (12-69)||(52926331-52926388)
chr3 (15-66)||(25517297-25517348)
chr3 (12-59)||(26869696-26869743)
chr3 (19-69)||(9607182-9607232)
chr3 (19-69)||(40272940-40272990)
chr3 (12-69)||(1217069-1217126)
chr3 (12-69)||(4495785-4495842)
chr3 (12-69)||(12914156-12914213)
chr3 (12-69)||(16735420-16735477)
chr3 (12-69)||(29366843-29366900)
chr3 (12-63)||(26573113-26573163)
chr3 (12-63)||(45620950-45621000)
chr3 (12-69)||(5173841-5173899)
chr3 (12-69)||(13628913-13628971)
chr3 (12-69)||(22609746-22609802)
chr3 (20-68)||(22123044-22123092)
chr3 (12-69)||(12525389-12525443)
chr3 (26-69)||(21874999-21875042)
chr3 (12-63)||(34420765-34420815)
chr3 (19-69)||(6411949-6411999)
chr3 (18-51)||(53062035-53062068)
chr3 (19-63)||(25944455-25944498)
[»] chr2 (27 HSPs)
chr2 (12-69)||(12024039-12024096)
chr2 (12-69)||(14530275-14530332)
chr2 (12-69)||(8455437-8455494)
chr2 (12-69)||(10543655-10543712)
chr2 (12-69)||(11514393-11514450)
chr2 (12-69)||(21779380-21779437)
chr2 (12-69)||(25079839-25079896)
chr2 (14-69)||(14544020-14544075)
chr2 (19-66)||(27573581-27573628)
chr2 (27-69)||(9671137-9671179)
chr2 (19-69)||(23397723-23397773)
chr2 (12-70)||(25249858-25249916)
chr2 (18-69)||(17896216-17896267)
chr2 (26-69)||(39189556-39189599)
chr2 (17-63)||(4516477-4516522)
chr2 (19-69)||(7214491-7214541)
chr2 (12-69)||(17705452-17705509)
chr2 (12-69)||(19977835-19977892)
chr2 (12-69)||(22371014-22371071)
chr2 (12-69)||(24200746-24200803)
chr2 (13-69)||(26684744-26684800)
chr2 (23-67)||(27466262-27466306)
chr2 (12-63)||(99384-99434)
chr2 (12-69)||(5840985-5841042)
chr2 (12-69)||(17472928-17472985)
chr2 (12-48)||(5450263-5450299)
chr2 (12-48)||(44604832-44604868)
[»] scaffold0057 (1 HSPs)
scaffold0057 (19-69)||(24895-24945)
[»] scaffold0005 (1 HSPs)
scaffold0005 (18-68)||(226533-226583)
[»] scaffold0024 (1 HSPs)
scaffold0024 (12-69)||(83832-83889)
[»] scaffold0194 (1 HSPs)
scaffold0194 (12-69)||(24621-24678)
[»] scaffold0311 (1 HSPs)
scaffold0311 (12-63)||(10773-10824)
[»] scaffold0049 (1 HSPs)
scaffold0049 (12-67)||(58936-58991)
[»] scaffold0116 (1 HSPs)
scaffold0116 (12-50)||(8867-8905)
[»] scaffold1176 (1 HSPs)
scaffold1176 (19-64)||(1713-1758)
[»] scaffold0223 (1 HSPs)
scaffold0223 (12-65)||(11093-11145)


Alignment Details
Target: chr4 (Bit Score: 51; Significance: 2e-20; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 17315419 - 17315477
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccca 70  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  17315419 gaacccgtgacctttcagtcacatgacaacaactttaccggttgcgccaaggttaccca 17315477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 6430746 - 6430803
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  6430746 gaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 6430803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 23501807 - 23501750
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  23501807 gaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 23501750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 47528649 - 47528706
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    |||||||||||||||||||||| |||||||||||||||| ||||| ||||||||||||    
T  47528649 gaacctgtgacctttcagtcacatgacaacaactttaccagttgcaccaaggttaccc 47528706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 48598944 - 48599001
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  48598944 gaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 48599001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 14590845 - 14590795
Alignment:
Q  18 gtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttacc 68  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  14590845 gtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacc 14590795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 20224991 - 20224941
Alignment:
Q  19 tgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  20224991 tgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 20224941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 21646978 - 21646924
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggtta 66  Q
    |||||||||||||| ||||||| |||||||||||||||| |||||||||||||||    
T  21646978 gaacctgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggtta 21646924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 67
Target Start/End: Original strand, 30352713 - 30352767
Alignment:
Q  13 aacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttac 67  Q
    |||| |||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  30352713 aacccgtgacctttcggtcacttgacaacaactttaccagttgcgccaaggttac 30352767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 5306784 - 5306841
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| |||||||||||||||| ||||| |||||||||| ||||||||||||||||||    
T  5306784 gaacccgtgacctttcagtcacatgacatcaactttaccagttgcgccaaggttaccc 5306841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 5648273 - 5648216
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| |||||||| ||||||| |||||||||||||||| ||||||||||||||||||    
T  5648273 gaacccgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttaccc 5648216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 10660418 - 10660361
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    |||| ||| ||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  10660418 gaacatgtaacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 10660361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 10874563 - 10874506
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    |||| ||| ||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  10874563 gaacatgtaacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 10874506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 11054267 - 11054324
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| |||||||||||||||| |||||||||||||||| |||||||||| |||||||    
T  11054267 gaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaagttaccc 11054324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 16911576 - 16911519
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| ||||||||| |||||| |||||||||||||||| ||||||||||||||||||    
T  16911576 gaacccgtgacctttaagtcacatgacaacaactttaccagttgcgccaaggttaccc 16911519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 30639394 - 30639337
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| ||||||||||||||||  ||||||||||||||| ||||||||||||||||||    
T  30639394 gaaccagtgacctttcagtcacaagacaacaactttaccagttgcgccaaggttaccc 30639337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 5313115 - 5313172
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| ||||||||||| |||| |||||||||||||||| ||| ||||||||||||||    
T  5313115 gaacccgtgacctttcaatcacatgacaacaactttaccagttacgccaaggttaccc 5313172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 13256518 - 13256575
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    |||||| ||||||| ||||||| |||||||||||||||| ||||| ||||||||||||    
T  13256518 gaacctatgaccttccagtcacatgacaacaactttaccagttgcaccaaggttaccc 13256575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 65
Target Start/End: Original strand, 16408724 - 16408777
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggtt 65  Q
    ||||| |||||||| ||||||| |||||||||||||||| ||||||||||||||    
T  16408724 gaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggtt 16408777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 37494865 - 37494808
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    |||||||||||||||||||| | || ||||||||||||| ||||| ||||||||||||    
T  37494865 gaacctgtgacctttcagtcgcatggcaacaactttaccagttgcaccaaggttaccc 37494808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 61
Target Start/End: Original strand, 47441651 - 47441699
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaa 61  Q
    |||||||||||||||||||||| |||||||||||||||| ||||||||||    
T  47441651 gaacctgtgacctttcagtcacgtgacaacaactttacc-gttgcgccaa 47441699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 54967035 - 54966983
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggtt 65  Q
    |||| ||||||||||||||||| |||||||||||||||| ||||||||||||||    
T  54967035 gaacatgtgacctttcagtcacatgacaacaactttacc-gttgcgccaaggtt 54966983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 20405101 - 20405050
Alignment:
Q  18 gtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    |||||||| ||||||| |||||||||||||||| |||||| |||||||||||    
T  20405101 gtgaccttccagtcacatgacaacaactttaccagttgcgtcaaggttaccc 20405050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 12 - 46
Target Start/End: Original strand, 17043515 - 17043549
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactt 46  Q
    |||||||||||||||||||||||||||||||||||    
T  17043515 gaacctgtgacctttcagtcacttgacaacaactt 17043549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 54730263 - 54730205
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccca 70  Q
    ||||| |||||||||  ||||| ||||||||||||||||| ||||||||| ||||||||    
T  54730263 gaacccgtgaccttttggtcacatgacaacaactttaccgattgcgccaaagttaccca 54730205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 18969738 - 18969698
Alignment:
Q  29 gtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| |||||||||||||||| ||||||||||||||||||    
T  18969738 gtcacatgacaacaactttaccagttgcgccaaggttaccc 18969698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 60
Target Start/End: Original strand, 49938711 - 49938759
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgcca 60  Q
    |||||||||||||||||||||| |||||||||||||  | |||||||||    
T  49938711 gaacctgtgacctttcagtcacgtgacaacaacttttaccgttgcgcca 49938759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 51
Target Start/End: Original strand, 487256 - 487295
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccg 51  Q
    ||||| |||||||||||||||| |||||||||||||||||    
T  487256 gaacccgtgacctttcagtcacatgacaacaactttaccg 487295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 49938563 - 49938610
Alignment:
Q  16 ctgtgacctttcagtcacttgacaacaactttaccggttgcgccaagg 63  Q
    |||||||||||||||||| |||||||||||||  | ||||||||||||    
T  49938563 ctgtgacctttcagtcacgtgacaacaacttttaccgttgcgccaagg 49938610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 55766593 - 55766644
Alignment:
Q  18 gtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    |||||||| | ||||| |||||||||||||||| |||||| |||||||||||    
T  55766593 gtgaccttccggtcacatgacaacaactttaccagttgcgtcaaggttaccc 55766644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 50
Target Start/End: Complemental strand, 25343201 - 25343163
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttacc 50  Q
    ||||||||||||| |||||||| ||||||||||||||||    
T  25343201 gaacctgtgacctatcagtcacgtgacaacaactttacc 25343163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 50
Target Start/End: Complemental strand, 43035262 - 43035224
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttacc 50  Q
    ||||| |||||||||||||||| ||||||||||||||||    
T  43035262 gaacccgtgacctttcagtcacgtgacaacaactttacc 43035224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 61
Target Start/End: Original strand, 42164269 - 42164317
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaa 61  Q
    ||||| |||||||||||||||| ||||||||| |||||| ||||||||||    
T  42164269 gaacccgtgacctttcagtcacatgacaacaattttacc-gttgcgccaa 42164317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 48
Target Start/End: Original strand, 23580329 - 23580365
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaacttta 48  Q
    ||||| |||||||||||||||| ||||||||||||||    
T  23580329 gaacccgtgacctttcagtcacgtgacaacaacttta 23580365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 30496447 - 30496491
Alignment:
Q  18 gtgacctttcagtcacttgacaacaactttaccggttgcgccaag 62  Q
    |||||||||||||||| |||||||||||||  | |||||||||||    
T  30496447 gtgacctttcagtcacgtgacaacaacttttacagttgcgccaag 30496491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 48
Target Start/End: Original strand, 30690304 - 30690340
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaacttta 48  Q
    ||||| |||||||||||||||||||||||| ||||||    
T  30690304 gaacccgtgacctttcagtcacttgacaaccacttta 30690340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 50
Target Start/End: Original strand, 44363259 - 44363291
Alignment:
Q  18 gtgacctttcagtcacttgacaacaactttacc 50  Q
    |||||||||||||||| ||||||||||||||||    
T  44363259 gtgacctttcagtcacatgacaacaactttacc 44363291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 51420580 - 51420537
Alignment:
Q  19 tgacctttcagtcacttgacaacaactttaccggttgcgccaagg 63  Q
    ||||||||||||||| |||||||||||| ||| ||||||||||||    
T  51420580 tgacctttcagtcacgtgacaacaacttcacc-gttgcgccaagg 51420537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 13144 - 13201
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  13144 gaaccggtgacctttcagtcacatgacaacaactttaccggttgcgccaaggttaccc 13201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 9e-20; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 32758275 - 32758218
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  32758275 gaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 32758218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 47077974 - 47078031
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  47077974 gaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 47078031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 48735242 - 48735299
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  48735242 gaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 48735299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 40463891 - 40463837
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggtta 66  Q
    ||||| |||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  40463891 gaacccgtgaccttacagtcacatgacaacaactttaccggttgcgccaaggtta 40463837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 12 - 65
Target Start/End: Original strand, 11617709 - 11617762
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggtt 65  Q
    |||||||||||||||||||||| |||||||||||||||| |||||||| |||||    
T  11617709 gaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccgaggtt 11617762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 21172128 - 21172185
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| ||||||||||||| || |||||||||||||||| ||||||||||||||||||    
T  21172128 gaacccgtgacctttcagttacatgacaacaactttaccagttgcgccaaggttaccc 21172185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 42495956 - 42496013
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| |||||||||||||||  |||||||||||||||| ||||||||||||||||||    
T  42495956 gaacccgtgacctttcagtcatatgacaacaactttaccagttgcgccaaggttaccc 42496013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 42798683 - 42798626
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| |||||||| ||||||| |||||||||||||||| ||||||||||||||||||    
T  42798683 gaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttaccc 42798626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 2541140 - 2541198
Alignment:
Q  12 gaacctgtgacctttc-agtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| |||||||||| |||||| |||||||||||||||| ||||||||||||||||||    
T  2541140 gaacccgtgacctttccagtcacatgacaacaactttaccagttgcgccaaggttaccc 2541198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 5180285 - 5180335
Alignment:
Q  19 tgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||||||||||||| |||||||||||||||| |||||| |||||||||||    
T  5180285 tgacctttcagtcacatgacaacaactttaccagttgcgtcaaggttaccc 5180335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 43557479 - 43557429
Alignment:
Q  19 tgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||||||||||||| |||||||||||||||| |||||| |||||||||||    
T  43557479 tgacctttcagtcacatgacaacaactttaccagttgcggcaaggttaccc 43557429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 7193099 - 7193042
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| |||||||||||||||| |||||||||||||||  ||| ||||||||||||||    
T  7193099 gaacccgtgacctttcagtcacatgacaacaactttacaagttacgccaaggttaccc 7193042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 65
Target Start/End: Original strand, 10693192 - 10693245
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggtt 65  Q
    ||||| |||||||||||||||| |||||||||||||||  ||||||||||||||    
T  10693192 gaacccgtgacctttcagtcacatgacaacaactttactagttgcgccaaggtt 10693245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 14732950 - 14732999
Alignment:
Q  19 tgacctttcagtcacttgacaacaactttaccggttgcgccaaggttacc 68  Q
    |||| |||||||||| |||||||||||||||| |||||||||||||||||    
T  14732950 tgacttttcagtcacatgacaacaactttaccagttgcgccaaggttacc 14732999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 18327048 - 18326991
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| ||||||||  |||||| |||||||||||||||| ||||||||||||||||||    
T  18327048 gaacccgtgaccttcaagtcacatgacaacaactttaccagttgcgccaaggttaccc 18326991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 42805538 - 42805481
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| |||||||| ||||||| |||||||||||||||| ||| ||||||||||||||    
T  42805538 gaacccgtgaccttccagtcacatgacaacaactttaccagttacgccaaggttaccc 42805481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 46354208 - 46354151
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| |||||||| || |||| |||||||||||||||| ||||||||||||||||||    
T  46354208 gaacccgtgaccttccaatcacatgacaacaactttaccagttgcgccaaggttaccc 46354151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 22699100 - 22699148
Alignment:
Q  21 acctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||||||||||| |||||||||||||||| |||||| |||||||||||    
T  22699100 acctttcagtcacatgacaacaactttaccagttgcgtcaaggttaccc 22699148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 17 - 69
Target Start/End: Original strand, 29140486 - 29140538
Alignment:
Q  17 tgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    |||||||||||||| || |||||||||||||||| ||||||||||| ||||||    
T  29140486 tgtgacctttcagttacatgacaacaactttaccagttgcgccaagattaccc 29140538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 35334941 - 35334989
Alignment:
Q  18 gtgacctttcagtcacttgacaacaactttaccggttgcgccaaggtta 66  Q
    |||||||| ||||||| |||||||||||||||| |||||||||||||||    
T  35334941 gtgaccttccagtcacatgacaacaactttaccagttgcgccaaggtta 35334989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 3469304 - 3469350
Alignment:
Q  16 ctgtgacctttcagtcacttgacaacaactttaccggttgcgccaagg 63  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||    
T  3469304 ctgtgacctttcagtcacatgacaacaactttacc-gttgcgccaagg 3469350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 63
Target Start/End: Original strand, 28362266 - 28362316
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaagg 63  Q
    |||||||||||||||||| ||| |||||||||||||||| ||||||||||||    
T  28362266 gaacctgtgacctttcagccacatgacaacaactttacc-gttgcgccaagg 28362316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 12473311 - 12473261
Alignment:
Q  19 tgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    |||||||||||  || ||||||||||||||||||||||||||||| |||||    
T  12473311 tgacctttcagatacatgacaacaactttaccggttgcgccaaggctaccc 12473261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 61
Target Start/End: Complemental strand, 19265829 - 19265781
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaa 61  Q
    ||||| |||||||||||||||| |||||||||||||||| ||||||||||    
T  19265829 gaacccgtgacctttcagtcacgtgacaacaactttacc-gttgcgccaa 19265781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 61
Target Start/End: Original strand, 19427010 - 19427059
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaa 61  Q
    ||||| |||||||||| ||||| |||||||||||||||| ||||||||||    
T  19427010 gaacccgtgacctttcggtcacatgacaacaactttaccagttgcgccaa 19427059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 34626332 - 34626385
Alignment:
Q  16 ctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| ||||||| |||| |||||||||||||||| ||||||| ||||||||||    
T  34626332 ctgtggcctttcaatcacatgacaacaactttaccagttgcgctaaggttaccc 34626385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 64
Target Start/End: Complemental strand, 27629648 - 27629596
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggt 64  Q
    ||||| |||||||||| ||||  |||||||||||||||| |||||||||||||    
T  27629648 gaacccgtgacctttcggtcaaatgacaacaactttaccagttgcgccaaggt 27629596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 67
Target Start/End: Original strand, 7794627 - 7794682
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttac 67  Q
    ||||| |||||||| ||||||| | |||||||||||||| ||||||| ||||||||    
T  7794627 gaacccgtgaccttccagtcacataacaacaactttaccagttgcgctaaggttac 7794682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 63
Target Start/End: Original strand, 23419795 - 23419845
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaagg 63  Q
    ||||||||||||||| |||||| ||||| |||||||||| ||||||||||||    
T  23419795 gaacctgtgaccttttagtcacatgacagcaactttacc-gttgcgccaagg 23419845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 42476881 - 42476830
Alignment:
Q  18 gtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||||||| |||||| |||||||||||||||| ||| |||||| |||||||    
T  42476881 gtgaccttttagtcacatgacaacaactttaccagttacgccaatgttaccc 42476830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 69
Target Start/End: Complemental strand, 25198725 - 25198679
Alignment:
Q  23 ctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||||||||  |||||||||||||||| ||| ||||||||||||||    
T  25198725 ctttcagtcatatgacaacaactttaccagttacgccaaggttaccc 25198679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 28078252 - 28078309
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| |||||||| ||||||| |||||||||||| ||  ||||||||| ||||||||    
T  28078252 gaacccgtgaccttacagtcacatgacaacaacttcacgagttgcgccagggttaccc 28078309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 69
Target Start/End: Original strand, 35787383 - 35787416
Alignment:
Q  36 gacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||||||||||||||||||| ||||||||||||    
T  35787383 gacaacaactttaccggttgcaccaaggttaccc 35787416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 47716473 - 47716416
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| |||||||| ||||||| || |||||||||| || |||| |||||||||||||    
T  47716473 gaacccgtgaccttccagtcacatggcaacaacttttccagttgtgccaaggttaccc 47716416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 1424037 - 1424085
Alignment:
Q  18 gtgacctttcagtcacttgacaacaactttaccggttgcgccaaggtta 66  Q
    |||||||| ||||||| | |||||||||||||| |||||||||| ||||    
T  1424037 gtgaccttccagtcacataacaacaactttaccagttgcgccaaagtta 1424085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 14099134 - 14099166
Alignment:
Q  19 tgacctttcagtcacttgacaacaactttaccg 51  Q
    ||||||||||||||| |||||||||||||||||    
T  14099134 tgacctttcagtcacatgacaacaactttaccg 14099166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 14409151 - 14409183
Alignment:
Q  19 tgacctttcagtcacttgacaacaactttaccg 51  Q
    ||||||||||||||| |||||||||||||||||    
T  14409151 tgacctttcagtcacatgacaacaactttaccg 14409183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 9e-20; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 18944680 - 18944623
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  18944680 gaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 18944623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 14617069 - 14617018
Alignment:
Q  18 gtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  14617069 gtgacctttcagtcacatgacaacaactttaccggttgcgccaaggttaccc 14617018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 34725217 - 34725274
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  34725217 gaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 34725274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 45812656 - 45812713
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    |||||||||||||||||||||| |||||||||||||| | ||||||||||||||||||    
T  45812656 gaacctgtgacctttcagtcacatgacaacaactttatcagttgcgccaaggttaccc 45812713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 25290194 - 25290143
Alignment:
Q  18 gtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    |||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  25290194 gtgacctttcagtcacatgacaacaactttacctgttgcgccaaggttaccc 25290143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 22930195 - 22930245
Alignment:
Q  19 tgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  22930195 tgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 22930245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 27474318 - 27474261
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    |||||||||||||||||||||| |||||||||||||||| |||| || ||||||||||    
T  27474318 gaacctgtgacctttcagtcacatgacaacaactttaccagttgagctaaggttaccc 27474261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 32632677 - 32632734
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| |||||||||||||||  |||||||||||||||| ||||||||||||||||||    
T  32632677 gaacccgtgacctttcagtcatatgacaacaactttaccagttgcgccaaggttaccc 32632734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 34714660 - 34714603
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| ||||||||||| |||| |||||||||||||||| ||||||||||||||||||    
T  34714660 gaacccgtgacctttcaatcacatgacaacaactttaccagttgcgccaaggttaccc 34714603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 40424779 - 40424722
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| ||| |||||||||||| |||||||||||||||| ||||||||||||||||||    
T  40424779 gaacccgtggcctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 40424722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 47214548 - 47214491
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| |||||||||||||||| |||||||||||||||| |||||||||| |||||||    
T  47214548 gaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaagttaccc 47214491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 18742089 - 18742137
Alignment:
Q  19 tgacctttcagtcacttgacaacaactttaccggttgcgccaaggttac 67  Q
    ||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  18742089 tgacctttcagtcacatgacaacaactttaccagttgcgccaaggttac 18742137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 33223015 - 33222971
Alignment:
Q  18 gtgacctttcagtcacttgacaacaactttaccggttgcgccaag 62  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  33223015 gtgacctttcagtcacatgacaacaactttaccggttgcgccaag 33222971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 41319928 - 41319984
Alignment:
Q  13 aacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||||||||||||||||||| |||||||||||||||| |||| | |||||||||||    
T  41319928 aacctgtgacctttcagtcacatgacaacaactttaccagttgtgtcaaggttaccc 41319984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 19932880 - 19932930
Alignment:
Q  19 tgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||||||||||||| |||||||||||||||| ||||||||||||| ||||    
T  19932880 tgacctttcagtcacatgacaacaactttaccagttgcgccaaggtaaccc 19932930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 8197080 - 8197023
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| |||||||||||||||| |||||||||||| ||| ||||| ||||||||||||    
T  8197080 gaacccgtgacctttcagtcacatgacaacaacttgaccagttgcaccaaggttaccc 8197023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 9939492 - 9939443
Alignment:
Q  18 gtgacctttcagtcacttgacaacaac-tttaccggttgcgccaaggtta 66  Q
    |||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  9939492 gtgacctttcagtcacatgacaacaacttttaccggttgcgccaaggtta 9939443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 20004213 - 20004270
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| |||||||| ||||||| |||||||||||||||| ||||| ||||||||||||    
T  20004213 gaacccgtgaccttccagtcacatgacaacaactttaccagttgcaccaaggttaccc 20004270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 23768441 - 23768498
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    |||||||||||||| ||||||| |||||||||||||||| |||||| | |||||||||    
T  23768441 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcgtcgaggttaccc 23768498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 38478401 - 38478458
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| |||||||||||||||| ||||||||| |||||  ||||||||||||||||||    
T  38478401 gaacccgtgacctttcagtcacatgacaacaagtttactagttgcgccaaggttaccc 38478458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 46248074 - 46248131
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| ||||| |||||||||| |||||||||||||||| |||| |||||||||||||    
T  46248074 gaacccgtgacatttcagtcacatgacaacaactttaccagttgagccaaggttaccc 46248131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 46991841 - 46991784
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| |||||||| ||||||| |||||||||||||||| ||||| ||||||||||||    
T  46991841 gaacccgtgaccttccagtcacatgacaacaactttaccagttgcaccaaggttaccc 46991784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 21006181 - 21006125
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttacc 68  Q
    |||||| ||||||||||||| | ||||||||| ||||||||||||| ||||||||||    
T  21006181 gaacctttgacctttcagtcgcatgacaacaattttaccggttgcgtcaaggttacc 21006125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 63
Target Start/End: Original strand, 2435908 - 2435958
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaagg 63  Q
    ||||| |||||||||||||||| |||||||||||||||| ||||||||||||    
T  2435908 gaacccgtgacctttcagtcacgtgacaacaactttacc-gttgcgccaagg 2435958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 63
Target Start/End: Original strand, 6983930 - 6983980
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaagg 63  Q
    |||||||||||||||||||||| ||||||||||||||||  |||||||||||    
T  6983930 gaacctgtgacctttcagtcacgtgacaacaactttacc-attgcgccaagg 6983980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 52910254 - 52910215
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccg 51  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  52910254 gaacctgtgacctttcagtcacatgacaacaactttaccg 52910215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 12 - 62
Target Start/End: Original strand, 18724666 - 18724715
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaag 62  Q
    ||||| |||||||||||||||| |||||||||||||||| |||||||||||    
T  18724666 gaacccgtgacctttcagtcacatgacaacaactttacc-gttgcgccaag 18724715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 30395849 - 30395903
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggtta 66  Q
    ||||| ||||||||  |||||| |||||||||||||||| |||||||||||||||    
T  30395849 gaacccgtgaccttaaagtcacatgacaacaactttaccagttgcgccaaggtta 30395903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 50811970 - 50811926
Alignment:
Q  18 gtgacctttcagtcacttgacaacaactttaccggttgcgccaagg 63  Q
    |||||||||||||||| |||||||||||||||| ||||||||||||    
T  50811970 gtgacctttcagtcacgtgacaacaactttacc-gttgcgccaagg 50811926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 19414476 - 19414420
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttacc 68  Q
    ||||| |||||||||||||||  ||||||||||||||||  || |||||||||||||    
T  19414476 gaacccgtgacctttcagtcatatgacaacaactttaccaattacgccaaggttacc 19414420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 51
Target Start/End: Original strand, 2436014 - 2436053
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccg 51  Q
    ||||| |||||||||||||||| |||||||||||||||||    
T  2436014 gaacccgtgacctttcagtcacgtgacaacaactttaccg 2436053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 69
Target Start/End: Complemental strand, 10668239 - 10668200
Alignment:
Q  30 tcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    |||| |||||||||||||||| ||||||||||||||||||    
T  10668239 tcacatgacaacaactttaccagttgcgccaaggttaccc 10668200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 35019263 - 35019217
Alignment:
Q  16 ctgtgacctttcagtcacttgacaacaactttaccggttgcgccaagg 63  Q
    |||||||||||||||||  |||||||||||||||| ||||||||||||    
T  35019263 ctgtgacctttcagtcatgtgacaacaactttacc-gttgcgccaagg 35019217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 51
Target Start/End: Original strand, 35117889 - 35117928
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccg 51  Q
    ||||| |||||||||||||||| |||||||||||||||||    
T  35117889 gaacccgtgacctttcagtcacgtgacaacaactttaccg 35117928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 50
Target Start/End: Complemental strand, 20036257 - 20036219
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttacc 50  Q
    ||||| |||||||||||||||| ||||||||||||||||    
T  20036257 gaacccgtgacctttcagtcacatgacaacaactttacc 20036219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 27201677 - 27201627
Alignment:
Q  19 tgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||||||||||||| ||||||||||||||||  || ||| ||||||||||    
T  27201677 tgacctttcagtcacatgacaacaactttaccatttacgctaaggttaccc 27201627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 4430148 - 4430197
Alignment:
Q  13 aacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaag 62  Q
    |||| |||||||| ||||||| |||||||||||||||| | |||||||||    
T  4430148 aacccgtgaccttccagtcacatgacaacaactttaccagctgcgccaag 4430197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 66
Target Start/End: Original strand, 12126957 - 12127010
Alignment:
Q  13 aacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggtta 66  Q
    |||| ||||||||||| | || |||||||||||||||  |||||||||||||||    
T  12126957 aacccgtgacctttcaattacatgacaacaactttacgagttgcgccaaggtta 12127010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 24564373 - 24564324
Alignment:
Q  20 gacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||||||| ||||  |||| ||||||||| |||||||||||||||||||    
T  24564373 gacctttcaatcacaagacatcaactttactggttgcgccaaggttaccc 24564324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 67
Target Start/End: Complemental strand, 45402114 - 45402077
Alignment:
Q  30 tcacttgacaacaactttaccggttgcgccaaggttac 67  Q
    |||| |||||||||||||||| ||||||||||||||||    
T  45402114 tcacatgacaacaactttaccagttgcgccaaggttac 45402077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 61
Target Start/End: Original strand, 49546028 - 49546076
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaa 61  Q
    |||||||| ||||||||| ||| |||||||||||||||| ||||||||||    
T  49546028 gaacctgtaacctttcagccacgtgacaacaactttacc-gttgcgccaa 49546076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 46; Significance: 2e-17; HSPs: 4)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 8959 - 8902
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||||||||| |||||||||| |||||||||||| ||||||||||||||||||||||    
T  8959 gaacctgtgacatttcagtcacatgacaacaacttcaccggttgcgccaaggttaccc 8902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 19287 - 19230
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||||||||| |||||||||| |||||||||||| ||||||||||||||||||||||    
T  19287 gaacctgtgacatttcagtcacatgacaacaacttcaccggttgcgccaaggttaccc 19230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 10169 - 10226
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| |||||||||||||||| |||||||||||||||| |||||| |||||||||||    
T  10169 gaacccgtgacctttcagtcacatgacaacaactttaccagttgcgtcaaggttaccc 10226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 20497 - 20554
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| |||||||||||||||| |||||||||||||||| |||||| |||||||||||    
T  20497 gaacccgtgacctttcagtcacatgacaacaactttaccagttgcgtcaaggttaccc 20554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 30593 - 30536
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  30593 gaaccggtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 30536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 2e-17; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 12670369 - 12670426
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  12670369 gaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 12670426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 30454216 - 30454273
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  30454216 gaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 30454273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 20869617 - 20869671
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggtta 66  Q
    ||||| |||||||||||||||| |||||||||||||||| |||||||||||||||    
T  20869617 gaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggtta 20869671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 18164880 - 18164937
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| |||||||||||||||| |||||||||||| ||||||||||||||| ||||||    
T  18164880 gaacccgtgacctttcagtcacatgacaacaacttcaccggttgcgccaagattaccc 18164937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 24245465 - 24245408
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| |||||||||||||||| |||||||||||||||| ||||| ||||||||||||    
T  24245465 gaacccgtgacctttcagtcacatgacaacaactttaccagttgccccaaggttaccc 24245408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 35261693 - 35261636
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| |||||||| ||||||| |||||||||||||||| ||||||||||||||||||    
T  35261693 gaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttaccc 35261636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 39461117 - 39461174
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| |||||||||||||| | |||||||||||||||| ||||||||||||||||||    
T  39461117 gaacccgtgacctttcagtctcatgacaacaactttaccagttgcgccaaggttaccc 39461174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 20284194 - 20284250
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttacc 68  Q
    ||||| |||||||||||||||| |||||||||||||||| |||||| ||||||||||    
T  20284194 gaacccgtgacctttcagtcacatgacaacaactttacccgttgcgtcaaggttacc 20284250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 21070823 - 21070879
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttacc 68  Q
    ||||| |||||||||||||||| |||||||||||||||| |||||| ||||||||||    
T  21070823 gaacccgtgacctttcagtcacatgacaacaactttacccgttgcgtcaaggttacc 21070879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 7136657 - 7136707
Alignment:
Q  19 tgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||||| ||||||| |||||||||||||||| ||||||||||||||||||    
T  7136657 tgaccttccagtcacatgacaacaactttaccagttgcgccaaggttaccc 7136707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 2626533 - 2626476
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| |||||||||| ||||| ||||||||||||||||  |||||||||||||||||    
T  2626533 gaacccgtgacctttcggtcacatgacaacaactttaccaattgcgccaaggttaccc 2626476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 13160716 - 13160659
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| |||||||| ||||||| |||||||||||||||| |||||||| |||||||||    
T  13160716 gaacccgtgaccttacagtcacatgacaacaactttaccagttgcgccgaggttaccc 13160659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 17823590 - 17823533
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| |||||||||| ||||| |||||||||||||||| ||||||||||| ||||||    
T  17823590 gaacccgtgacctttcggtcacatgacaacaactttaccagttgcgccaagattaccc 17823533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 28817747 - 28817804
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| |||||||| ||||||| |||||||||||||||| ||||| ||||||||||||    
T  28817747 gaacccgtgaccttccagtcacatgacaacaactttaccagttgcaccaaggttaccc 28817804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 36720810 - 36720753
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| |||||||| ||||||| |||||||||||||||| ||| ||||||||||||||    
T  36720810 gaacccgtgaccttccagtcacatgacaacaactttaccagttacgccaaggttaccc 36720753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 25250536 - 25250480
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttacc 68  Q
    |||| ||||||||| ||||||| |||||||||||||||| |||| ||||||||||||    
T  25250536 gaacatgtgaccttccagtcacatgacaacaactttaccagttgtgccaaggttacc 25250480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 63
Target Start/End: Complemental strand, 28407430 - 28407379
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaagg 63  Q
    ||||| |||||||| ||||||| |||||||||||||||| ||||||||||||    
T  28407430 gaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaagg 28407379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 29521806 - 29521863
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| |||||||| |||||||  ||||||||||||| | ||||||||||||||||||    
T  29521806 gaacccgtgaccttccagtcacacgacaacaactttatcagttgcgccaaggttaccc 29521863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 31454202 - 31454145
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    |||| ||||||||||||  ||| ||||||||||| |||||||||||||||| ||||||    
T  31454202 gaacatgtgacctttcaaccacatgacaacaactataccggttgcgccaagattaccc 31454145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 44530163 - 44530106
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| ||||||||  |||||| ||||| |||||||||| ||||||||||||||||||    
T  44530163 gaacccgtgaccttctagtcacatgacagcaactttaccagttgcgccaaggttaccc 44530106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 63
Target Start/End: Original strand, 42083820 - 42083870
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaagg 63  Q
    ||||| |||||||||||||||| ||||||||| |||||| ||||||||||||    
T  42083820 gaacccgtgacctttcagtcacgtgacaacaattttacc-gttgcgccaagg 42083870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 63
Target Start/End: Original strand, 44781627 - 44781677
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaagg 63  Q
    ||||| |||| ||||||||||| |||||||||||||||| ||||||||||||    
T  44781627 gaacccgtgaactttcagtcacgtgacaacaactttacc-gttgcgccaagg 44781677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 45071279 - 45071222
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| |||||||| || |||| |||||||||||||||| ||  ||||||||||||||    
T  45071279 gaacccgtgaccttacaatcacatgacaacaactttaccagtatcgccaaggttaccc 45071222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 23286431 - 23286471
Alignment:
Q  29 gtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| |||||||||||||||| |||||| |||||||||||    
T  23286431 gtcacatgacaacaactttaccagttgcgacaaggttaccc 23286471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 69
Target Start/End: Complemental strand, 42840902 - 42840866
Alignment:
Q  33 cttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    |||||||||||||||||  ||||||||||||||||||    
T  42840902 cttgacaacaactttactagttgcgccaaggttaccc 42840866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 2e-17; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 1346978 - 1346921
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  1346978 gaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 1346921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 1354876 - 1354933
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  1354876 gaaccagtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 1354933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 9161137 - 9161080
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||    
T  9161137 gaacctgtgacctttcagtcacatgacaacaactttaccgattgcgtcaaggttaccc 9161080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 33922949 - 33923006
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||||||||| |||||||||  |||||||||||||||||||||||||||||||||||    
T  33922949 gaacctgtgacttttcagtcaaatgacaacaactttaccggttgcgccaaggttaccc 33923006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 3815198 - 3815255
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| ||||| |||||||||| |||||||||||||||| ||||||||||||||||||    
T  3815198 gaacccgtgacatttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 3815255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 14975207 - 14975255
Alignment:
Q  18 gtgacctttcagtcacttgacaacaactttaccggttgcgccaaggtta 66  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  14975207 gtgaccttccagtcacatgacaacaactttaccggttgcgccaaggtta 14975255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 20400681 - 20400625
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttacc 68  Q
    |||||||||||||||||||||| ||||||||||| ||||  ||||||||||||||||    
T  20400681 gaacctgtgacctttcagtcacatgacaacaactataccaattgcgccaaggttacc 20400625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 8409251 - 8409200
Alignment:
Q  18 gtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    |||||||||||||||| | |||||||||||||| ||||||||||||||||||    
T  8409251 gtgacctttcagtcacattacaacaactttaccagttgcgccaaggttaccc 8409200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 62
Target Start/End: Original strand, 12222038 - 12222088
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaag 62  Q
    ||||| |||||||||||||||| |||||||||||||||| |||||||||||    
T  12222038 gaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaag 12222088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 24734640 - 24734591
Alignment:
Q  19 tgacctttcagtcacttgacaacaactttaccggttgcgccaaggttacc 68  Q
    ||||||||||||||| |||||||||||||||| |||||||||| ||||||    
T  24734640 tgacctttcagtcacatgacaacaactttaccagttgcgccaatgttacc 24734591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 65
Target Start/End: Original strand, 13905106 - 13905152
Alignment:
Q  18 gtgacctttcagtcacttgacaacaactttaccggttgcgccaaggtt 65  Q
    |||||||||||||||| |||||||||||||||| ||||||||||||||    
T  13905106 gtgacctttcagtcacatgacaacaactttacc-gttgcgccaaggtt 13905152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 32728281 - 32728334
Alignment:
Q  16 ctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    |||||||||||||||||| |||||||||||||||  ||| | ||||||||||||    
T  32728281 ctgtgacctttcagtcacatgacaacaactttactcgttccaccaaggttaccc 32728334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 12889440 - 12889401
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccg 51  Q
    ||||||||||||||||| |||| |||||||||||||||||    
T  12889440 gaacctgtgacctttcactcacgtgacaacaactttaccg 12889401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 15866165 - 15866215
Alignment:
Q  19 tgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    |||||||||| |||| || ||||||||||||| |||| |||||||||||||    
T  15866165 tgacctttcaatcacatgccaacaactttaccagttgggccaaggttaccc 15866215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 29355978 - 29356036
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaa-ctttaccggttgcgccaaggttaccc 69  Q
    ||||| |||||||||||||||| |||||||||  |||||| |||| |||||||||||||    
T  29355978 gaacccgtgacctttcagtcacatgacaacaatttttaccagttgtgccaaggttaccc 29356036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 1941861 - 1941812
Alignment:
Q  20 gacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    |||||| ||||||  |||||||||||||||| ||||| ||||||||||||    
T  1941861 gaccttccagtcagatgacaacaactttaccagttgcaccaaggttaccc 1941812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 12063481 - 12063424
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| |||||||||||||| | ||| |||||||||| | ||||| ||||||||||||    
T  12063481 gaacccgtgacctttcagtctcatgataacaactttatcagttgcaccaaggttaccc 12063424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 61
Target Start/End: Complemental strand, 14553525 - 14553477
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaa 61  Q
    ||||||||||||||| |||||| |||||||||||||||| ||||| ||||    
T  14553525 gaacctgtgaccttt-agtcacatgacaacaactttaccagttgcaccaa 14553477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 19649294 - 19649338
Alignment:
Q  18 gtgacctttcagtcacttgacaacaactttaccggttgcgccaag 62  Q
    |||| ||||||||||| |||||||||||||| | |||||||||||    
T  19649294 gtgatctttcagtcacatgacaacaactttatcagttgcgccaag 19649338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 2e-17; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 38879595 - 38879538
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  38879595 gaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 38879538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 43334216 - 43334159
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  43334216 gaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 43334159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 1565437 - 1565388
Alignment:
Q  20 gacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    |||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  1565437 gacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 1565388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 4619227 - 4619284
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| |||||||| ||||||| |||||||||||||||| ||||||||||||||||||    
T  4619227 gaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttaccc 4619284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 24448904 - 24448847
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| |||||||| ||||||| |||||||||||||||| ||||||||||||||||||    
T  24448904 gaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttaccc 24448847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 27328766 - 27328709
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    |||||||||||||||||||||| ||||||||||||||||  ||||| |||||||||||    
T  27328766 gaacctgtgacctttcagtcacatgacaacaactttaccaattgcgtcaaggttaccc 27328709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 35710327 - 35710270
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| ||||||||||||| || |||||||||||||||| ||||||||||||||||||    
T  35710327 gaacccgtgacctttcagttacatgacaacaactttaccagttgcgccaaggttaccc 35710270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 37024675 - 37024732
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| |||||||||||||||| |||||||||||||||| ||||| ||||||||||||    
T  37024675 gaacccgtgacctttcagtcacatgacaacaactttaccagttgcaccaaggttaccc 37024732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 41014333 - 41014276
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| |||||||| ||||||| |||||||||||||||| ||||||||||||||||||    
T  41014333 gaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttaccc 41014276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 2838787 - 2838735
Alignment:
Q  18 gtgaccttt-cagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  2838787 gtgacctttacagtcacatgacaacaactttaccggttgcgccaaggttaccc 2838735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 8170103 - 8170157
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggtta 66  Q
    ||||| |||||||||| ||||| |||||||||||||||| |||||||||||||||    
T  8170103 gaacccgtgacctttcggtcacatgacaacaactttaccagttgcgccaaggtta 8170157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 23974794 - 23974738
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| |||||||| ||||||| |||||||||||||||| ||||||||||||||||||    
T  23974794 gaacccgtgaccttccagtcacatgacaacaactttacc-gttgcgccaaggttaccc 23974738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 22861793 - 22861844
Alignment:
Q  18 gtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    |||||||||||||||| |||||||||||||| | |||| |||||||||||||    
T  22861793 gtgacctttcagtcacatgacaacaactttatcagttgtgccaaggttaccc 22861844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 10634274 - 10634317
Alignment:
Q  19 tgacctttcagtcacttgacaacaactttaccggttgcgccaagg 63  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||    
T  10634274 tgacctttcagtcacttgacaacaacttcacc-gttgcgccaagg 10634317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 22187298 - 22187242
Alignment:
Q  13 aacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    |||| |||||||||||||||  |||||||||||||||  |||||||||| |||||||    
T  22187298 aaccggtgacctttcagtcaaatgacaacaactttactagttgcgccaaagttaccc 22187242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 19438757 - 19438706
Alignment:
Q  18 gtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    |||| |||| |||||  |||||||||||||||| ||||||||||||||||||    
T  19438757 gtgatcttttagtcatatgacaacaactttaccagttgcgccaaggttaccc 19438706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 63
Target Start/End: Original strand, 39079887 - 39079937
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaagg 63  Q
    ||||| |||||||||| ||||| |||||||||||||||| ||||||||||||    
T  39079887 gaacccgtgacctttctgtcacatgacaacaactttacc-gttgcgccaagg 39079937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 63
Target Start/End: Complemental strand, 39301137 - 39301087
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaagg 63  Q
    ||||| ||||||||||||| || |||||||||||||||| ||||||||||||    
T  39301137 gaacccgtgacctttcagtaacatgacaacaactttacc-gttgcgccaagg 39301087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 31299640 - 31299591
Alignment:
Q  18 gtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttac 67  Q
    ||||||| | |||||| |||||||||||||||| ||||| ||||||||||    
T  31299640 gtgacctgtaagtcacatgacaacaactttaccagttgcaccaaggttac 31299591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 2e-17; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 8247810 - 8247867
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  8247810 gaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 8247867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 10870072 - 10870129
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  10870072 gaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 10870129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 7697006 - 7697063
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| ||||||||| |||||| |||||||||||||||| ||||||||||||||||||    
T  7697006 gaacccgtgaccttttagtcacatgacaacaactttaccagttgcgccaaggttaccc 7697063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 13730725 - 13730782
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| |||||||| ||||||| |||||||||||||||| ||||||||||||||||||    
T  13730725 gaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttaccc 13730782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 39203552 - 39203495
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    |||||||||||||||||||||| |||||||||||||||  |||| |||||||||||||    
T  39203552 gaacctgtgacctttcagtcacatgacaacaactttacaagttgtgccaaggttaccc 39203495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 46421158 - 46421215
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| ||||||||| |||||| |||||||||||||||| ||||||||||||||||||    
T  46421158 gaacccgtgacctttaagtcacatgacaacaactttaccagttgcgccaaggttaccc 46421215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 52926331 - 52926388
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| |||||||| ||||||| |||||||||||||||| ||||||||||||||||||    
T  52926331 gaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttaccc 52926388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 15 - 66
Target Start/End: Original strand, 25517297 - 25517348
Alignment:
Q  15 cctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggtta 66  Q
    ||||||||||| ||||||| |||||||||||||||| |||||||||||||||    
T  25517297 cctgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggtta 25517348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 12 - 59
Target Start/End: Complemental strand, 26869743 - 26869696
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgcc 59  Q
    |||||||||||||||||||||| |||||||||||||||| ||||||||    
T  26869743 gaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 26869696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 9607232 - 9607182
Alignment:
Q  19 tgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||||||||||||| |||||||||||||||  ||||||||||||||||||    
T  9607232 tgacctttcagtcacatgacaacaactttacaagttgcgccaaggttaccc 9607182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 40272940 - 40272990
Alignment:
Q  19 tgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||||| ||||||| |||||||||||||||| ||||||||||||||||||    
T  40272940 tgaccttccagtcacatgacaacaactttaccagttgcgccaaggttaccc 40272990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 1217126 - 1217069
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| ||||||||||||| || |||| ||||||||||| ||||||||||||||||||    
T  1217126 gaacccgtgacctttcagtgacatgactacaactttaccagttgcgccaaggttaccc 1217069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 4495785 - 4495842
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| |||||||| ||||||| |||||||||||||||| ||||||| ||||||||||    
T  4495785 gaacccgtgaccttccagtcacatgacaacaactttaccagttgcgcgaaggttaccc 4495842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 12914156 - 12914213
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    |||| ||||||||||| ||||| | |||||||||||||| ||||||||||||||||||    
T  12914156 gaacttgtgacctttcggtcacattacaacaactttaccagttgcgccaaggttaccc 12914213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 16735477 - 16735420
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| ||||| || ||||||| |||||||||||||||| ||||||||||||||||||    
T  16735477 gaacccgtgacgttacagtcacatgacaacaactttaccagttgcgccaaggttaccc 16735420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 29366843 - 29366900
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| ||||||||| |||||| |||||||||||||||| ||| ||||||||||||||    
T  29366843 gaacccgtgaccttttagtcacatgacaacaactttaccagttacgccaaggttaccc 29366900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 63
Target Start/End: Complemental strand, 26573163 - 26573113
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaagg 63  Q
    ||||| |||||||||||||||| |||||||||||||||| ||||||||||||    
T  26573163 gaacccgtgacctttcagtcacgtgacaacaactttacc-gttgcgccaagg 26573113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 63
Target Start/End: Original strand, 45620950 - 45621000
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaagg 63  Q
    ||||| |||||||||||||||| |||||||||||||||| ||||||||||||    
T  45620950 gaacccgtgacctttcagtcacgtgacaacaactttacc-gttgcgccaagg 45621000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 5173841 - 5173899
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaac-tttaccggttgcgccaaggttaccc 69  Q
    ||||| |||||||||||||||| |||||||||| |||||  ||||||||||||||||||    
T  5173841 gaacccgtgacctttcagtcacatgacaacaacttttacgagttgcgccaaggttaccc 5173899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 13628913 - 13628971
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaac-tttaccggttgcgccaaggttaccc 69  Q
    ||||| |||||||||||||||| |||||||||| |||||| |||| |||||||||||||    
T  13628913 gaacccgtgacctttcagtcacatgacaacaacttttaccagttgtgccaaggttaccc 13628971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 22609802 - 22609746
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| || ||||| ||||||| |||||||||||||||| ||||||||||||||||||    
T  22609802 gaacccgttaccttacagtcacatgacaacaactttacc-gttgcgccaaggttaccc 22609746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 22123044 - 22123092
Alignment:
Q  20 gacctttcagtcacttgacaacaactttaccggttgcgccaaggttacc 68  Q
    |||||||||||||| ||||||||| |||||| || ||||||||||||||    
T  22123044 gacctttcagtcacatgacaacaaatttaccagtggcgccaaggttacc 22123092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 12525443 - 12525389
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    |||||||||||||||||||||  |||||||   |||||| ||||||||||||||||||    
T  12525443 gaacctgtgacctttcagtcatatgacaac---tttaccagttgcgccaaggttaccc 12525389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 69
Target Start/End: Complemental strand, 21875042 - 21874999
Alignment:
Q  26 tcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    |||||||| |||||||||||||||| |||||| |||||||||||    
T  21875042 tcagtcacatgacaacaactttaccagttgcgtcaaggttaccc 21874999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 63
Target Start/End: Original strand, 34420765 - 34420815
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaagg 63  Q
    ||||| |||||||||||||||| |||||||||||||| | ||||||||||||    
T  34420765 gaacccgtgacctttcagtcacgtgacaacaacttta-ctgttgcgccaagg 34420815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 6411949 - 6411999
Alignment:
Q  19 tgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    |||||| ||||| || |||||||||||||||| |||||| |||||||||||    
T  6411949 tgacctatcagttacatgacaacaactttaccagttgcgtcaaggttaccc 6411999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 53062068 - 53062035
Alignment:
Q  18 gtgacctttcagtcacttgacaacaactttaccg 51  Q
    |||||||||||||||| |||||||||||||||||    
T  53062068 gtgacctttcagtcacatgacaacaactttaccg 53062035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 25944498 - 25944455
Alignment:
Q  19 tgacctttcagtcacttgacaacaactttaccggttgcgccaagg 63  Q
    ||||||||||||||| |||||||||||||| | ||||||||||||    
T  25944498 tgacctttcagtcacgtgacaacaacttta-ctgttgcgccaagg 25944455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 2e-17; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 12024039 - 12024096
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  12024039 gaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 12024096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 14530332 - 14530275
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  14530332 gaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 14530275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 8455437 - 8455494
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| |||||||| ||||||| |||||||||||||||| ||||||||||||||||||    
T  8455437 gaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttaccc 8455494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 10543712 - 10543655
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| |||||||||||||||| |||||||||||||| | ||||||||||||||||||    
T  10543712 gaacccgtgacctttcagtcacatgacaacaactttatcagttgcgccaaggttaccc 10543655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 11514450 - 11514393
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| |||||||| ||||||| |||||||||||||||| ||||||||||||||||||    
T  11514450 gaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttaccc 11514393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 21779380 - 21779437
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| |||||||||||||||| |||||||||||| ||| ||||||||||||||||||    
T  21779380 gaacccgtgacctttcagtcacatgacaacaacttcaccagttgcgccaaggttaccc 21779437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 25079839 - 25079896
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| |||||||| ||||||| |||||||||||||||| ||||||||||||||||||    
T  25079839 gaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttaccc 25079896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 14 - 69
Target Start/End: Complemental strand, 14544075 - 14544020
Alignment:
Q  14 acctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    |||||| ||||||||||||| ||||||||||||||||  |||||||||||||||||    
T  14544075 acctgtaacctttcagtcacatgacaacaactttaccaattgcgccaaggttaccc 14544020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 19 - 66
Target Start/End: Complemental strand, 27573628 - 27573581
Alignment:
Q  19 tgacctttcagtcacttgacaacaactttaccggttgcgccaaggtta 66  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||||    
T  27573628 tgacctttcagtcacatgacaacaactttaccagttgcgccaaggtta 27573581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 27 - 69
Target Start/End: Complemental strand, 9671179 - 9671137
Alignment:
Q  27 cagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||||| |||||||||||||||||||||||||||||||||||    
T  9671179 cagtcacatgacaacaactttaccggttgcgccaaggttaccc 9671137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 23397773 - 23397723
Alignment:
Q  19 tgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||||||||||||| |||||||||||||||| ||||| ||||||||||||    
T  23397773 tgacctttcagtcacatgacaacaactttaccagttgcaccaaggttaccc 23397723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 25249858 - 25249916
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccca 70  Q
    ||||| |||||||| ||||||| ||||||||||||||||  ||||||||||||||||||    
T  25249858 gaacccgtgaccttacagtcacatgacaacaactttaccaattgcgccaaggttaccca 25249916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 17896267 - 17896216
Alignment:
Q  18 gtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    |||||||||| ||||| |||||||||||||||| |||||| |||||||||||    
T  17896267 gtgacctttcggtcacatgacaacaactttaccagttgcgtcaaggttaccc 17896216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 69
Target Start/End: Original strand, 39189556 - 39189599
Alignment:
Q  26 tcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    |||||||| |||||||||||||||| ||||||||||||||||||    
T  39189556 tcagtcacatgacaacaactttaccagttgcgccaaggttaccc 39189599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 17 - 63
Target Start/End: Original strand, 4516477 - 4516522
Alignment:
Q  17 tgtgacctttcagtcacttgacaacaactttaccggttgcgccaagg 63  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||||    
T  4516477 tgtgacctttcagtcacgtgacaacaactttacc-gttgcgccaagg 4516522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 7214541 - 7214491
Alignment:
Q  19 tgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||||||||||||| |||||||||||||||| |||| ||||| |||||||    
T  7214541 tgacctttcagtcacatgacaacaactttaccagttgtgccaaagttaccc 7214491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 17705509 - 17705452
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| ||||||||  |||||| |||||||||||||||| ||||| ||||||||||||    
T  17705509 gaacccgtgaccttctagtcacatgacaacaactttaccagttgcaccaaggttaccc 17705452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 19977835 - 19977892
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| |||||||||| ||||| |||||||||||| ||| ||| ||||||||||||||    
T  19977835 gaacccgtgacctttcggtcacatgacaacaacttcaccagttccgccaaggttaccc 19977892  T

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Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 22371071 - 22371014
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| |||||||  ||||||| |||||||||||||||| |||| |||||||||||||    
T  22371071 gaacccgtgacctcccagtcacatgacaacaactttaccagttgggccaaggttaccc 22371014  T

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Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 24200746 - 24200803
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| ||||| |||||||||| |||||||||||||||| |||||  |||||||||||    
T  24200746 gaacccgtgacttttcagtcacatgacaacaactttaccagttgcatcaaggttaccc 24200803  T

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Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 26684744 - 26684800
Alignment:
Q  13 aacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| |||||||||| |||| |||||||||||||||| ||||||| || |||||||    
T  26684744 aacctttgacctttcaatcacatgacaacaactttaccagttgcgctaaagttaccc 26684800  T

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Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 67
Target Start/End: Original strand, 27466262 - 27466306
Alignment:
Q  23 ctttcagtcacttgacaacaactttaccggttgcgccaaggttac 67  Q
    ||||||||||| |||||||||||||||| |||||||||| |||||    
T  27466262 ctttcagtcacatgacaacaactttaccagttgcgccaatgttac 27466306  T

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Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 63
Target Start/End: Original strand, 99384 - 99434
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaagg 63  Q
    ||||| |||||||||||||||| |||||||||||||| | ||||||||||||    
T  99384 gaacccgtgacctttcagtcacgtgacaacaacttta-ctgttgcgccaagg 99434  T

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Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 5841042 - 5840985
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| |||||||| ||||||| |||||||||||||| |  |||| ||||||||||||    
T  5841042 gaacccgtgaccttccagtcacatgacaacaactttatcatttgcaccaaggttaccc 5840985  T

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Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 17472985 - 17472928
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| ||||||||||| ||| |||||||||||||||   |||||| |||||||||||    
T  17472985 gaacccgtgacctttcaatcatttgacaacaactttattagttgcgtcaaggttaccc 17472928  T

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Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 48
Target Start/End: Complemental strand, 5450299 - 5450263
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaacttta 48  Q
    ||||| |||||||||||||||| ||||||||||||||    
T  5450299 gaacccgtgacctttcagtcacatgacaacaacttta 5450263  T

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Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 48
Target Start/End: Complemental strand, 44604868 - 44604832
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaacttta 48  Q
    |||||||||||||| ||||||| ||||||||||||||    
T  44604868 gaacctgtgaccttccagtcacatgacaacaacttta 44604832  T

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Target: scaffold0057 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 24895 - 24945
Alignment:
Q  19 tgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  24895 tgacctttcagtcacatgacaacaactttaccagttgcgccaaggttaccc 24945  T

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Target: scaffold0005 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 226533 - 226583
Alignment:
Q  18 gtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttacc 68  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  226533 gtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacc 226583  T

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Target: scaffold0024 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 83889 - 83832
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| |||||||||||||||| |||||||||||||||  ||||||||||||||||||    
T  83889 gaacccgtgacctttcagtcacatgacaacaactttactagttgcgccaaggttaccc 83832  T

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Target: scaffold0194 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 24678 - 24621
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttaccc 69  Q
    ||||| |||||||| |||||||||||||||||||||| |  ||| |||||||||||||    
T  24678 gaacccgtgaccttacagtcacttgacaacaactttatcaattgtgccaaggttaccc 24621  T

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Target: scaffold0311 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 63
Target Start/End: Complemental strand, 10824 - 10773
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaagg 63  Q
    ||||| |||||||| ||||||| |||||||||||||||| ||||| ||||||    
T  10824 gaacccgtgaccttccagtcacatgacaacaactttaccagttgcaccaagg 10773  T

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Target: scaffold0049 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 67
Target Start/End: Complemental strand, 58991 - 58936
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggttac 67  Q
    ||||| |||||||||||||||| |||||| || |||||| ||||| ||||||||||    
T  58991 gaacccgtgacctttcagtcacatgacaataagtttaccagttgctccaaggttac 58936  T

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Target: scaffold0116 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 50
Target Start/End: Complemental strand, 8905 - 8867
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttacc 50  Q
    |||||||||||||| ||||||| ||||||||||||||||    
T  8905 gaacctgtgaccttacagtcacatgacaacaactttacc 8867  T

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Target: scaffold1176 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 1713 - 1758
Alignment:
Q  19 tgacctttcagtcacttgacaacaactttaccggttgcgccaaggt 64  Q
    ||||||||||||||| ||||||||||||||||  ||||| ||||||    
T  1713 tgacctttcagtcacatgacaacaactttaccaattgcgtcaaggt 1758  T

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Target: scaffold0223 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 11145 - 11093
Alignment:
Q  12 gaacctgtgacctttcagtcacttgacaacaactttaccggttgcgccaaggtt 65  Q
    ||||| |||||||||||||||| | | |||||||||||| ||||||||||||||    
T  11145 gaacccgtgacctttcagtcacat-agaacaactttaccagttgcgccaaggtt 11093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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