View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF5250_low_3 (Length: 608)
Name: NF5250_low_3
Description: NF5250
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5250_low_3 |
 | |
|
Alignment Details
Target: chr5 (Bit Score: 567; Significance: 0; HSPs: 5)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 567; E-Value: 0
Query Start/End: Original strand, 19 - 597
Target Start/End: Complemental strand, 37165283 - 37164705
Alignment:
| Q |
19 |
atgtatgtctccaattacggctaagaaacaatgatccccataggccccaaaatcctgtgataaatcccaatgccacactcaaataaattggccttttatc |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
37165283 |
atgtatgtctccaattacggctaagaaacaatgatccccataggccccaaaatcctgtgataaatcccaatgccacactcaaataaattggctttttatc |
37165184 |
T |
|
| Q |
119 |
ttcttgactactttcttcatgtgtttctggtttctgaggtgcaacttcatctcttggacattttttgtcaagtggtttgccacaaagatcagcattccct |
218 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37165183 |
ttcttgactactttcttcatgtgtttctggtttctgaggtgcaacttcatctctaggacattttttgtcaagtggtttgccacaaagatcagcattccct |
37165084 |
T |
|
| Q |
219 |
tcataacttgaggcatcgaaactctgtaactgggttccaattggaattcttccggacaggttgttattggacagatttaacatggaaaggcgatcaattt |
318 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37165083 |
tcataacttgaggcatcgaaactctgtaactgggttccaattggaattcttccggacaggttgttattggacagatttaacatggaaaggcgatcaattt |
37164984 |
T |
|
| Q |
319 |
gagttagagaatgaggaattaaaccagtgaaatggtttcttgacaagtcaagaaattcaagtgatgttaactttccaatcattgaagtaatttcccctgt |
418 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37164983 |
gagttagagaatgaggaattaaaccagtgaaatggtttcttgacaagtcaagaaattcaagtgatgttaactttccaatcattgaagtaatttcccctgt |
37164884 |
T |
|
| Q |
419 |
caaattgttgcttgataaattcaatgacaccaatgctatcaagtttcctatttcttctggaaggtctcctgtcaattgattgcttgatagatcaatgctt |
518 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37164883 |
caaattgttgcttgataaattcaatgacaccaatgctatcaagtttcctatttcttctggaaggtctcctgtcaattgattgcttgatagatcaatgctt |
37164784 |
T |
|
| Q |
519 |
ctcaaaatgagcttatcattcttgaatagtcgttctgtacctttccacatcatcaatgcaaataaatcgtatccttcat |
597 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37164783 |
ctcaaaatgagcttattattcttgaatagtcgttctgtacctttccacatcatcaatgcaaataaatcgtatccttcat |
37164705 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 325; E-Value: 0
Query Start/End: Original strand, 19 - 570
Target Start/End: Complemental strand, 37132832 - 37132278
Alignment:
| Q |
19 |
atgtatgtctccaattacggctaagaaacaatgatccccataggccccaaaatcctgtgataaatcccaatgccacactcaaataaattggccttttatc |
118 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||| |
|
|
| T |
37132832 |
atgtatgtctccaagtacggctaagaaacaatgatccccataggccccaaaatcctgtgataaatcccaatgtcacgctcaaataaattggctttttatc |
37132733 |
T |
|
| Q |
119 |
ttcttgactactttcttcatgtgtttctggtttctgaggtgcaacttc---atctcttggacattttttgtcaagtggtttgccacaaagatcagcattc |
215 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||| |||||||||| ||||| ||||||| |||| ||||||||||| |||||||||||| |||| |
|
|
| T |
37132732 |
ttcttgactactttcttcatgtgtttctggtttatgatgtgcaacttcttcatctcctggacatattttttcaagtggtttcccacaaagatcaacattg |
37132633 |
T |
|
| Q |
216 |
ccttcataacttgaggcatcgaaactctgtaactgggttccaattggaattcttccggacaggttgttattggacagatttaacatggaaaggcgatcaa |
315 |
Q |
| |
|
|||| ||||||||| |||||||||||||||||||| || ||||||||||||||||| || || ||||||| | ||||| |||||||| | |||||||| |
|
|
| T |
37132632 |
ccttgataacttgaagcatcgaaactctgtaactgcgtgccaattggaattcttccagagagattgttatccgctagattcaacatggacacgcgatcaa |
37132533 |
T |
|
| Q |
316 |
tttgagttagagaatgaggaattaaaccagtgaaatggtttcttgacaagtcaagaaattcaagtgatgttaactttccaatcattgaagtaatttcccc |
415 |
Q |
| |
|
|||||| ||||||| |||||||| ||||| |||||||||||||||||||||||| | ||||||||||||||| |||||||| | |||| |||||| || |
|
|
| T |
37132532 |
tttgagctagagaaggaggaattggaccagataaatggtttcttgacaagtcaagagaatcaagtgatgttaaccttccaatcttcgaagaaatttctcc |
37132433 |
T |
|
| Q |
416 |
tgtcaaattgttgcttgataaattcaatgacaccaatgctatcaagtttcctatttcttctggaaggtctcctgtcaattgattgcttgatagatcaatg |
515 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||||| |||||||||||||| |
|
|
| T |
37132432 |
tgtcaacttgttgcttgataaattcaatgacaccaactctatcaagtttcctatttcttctggaatgtctcctatcaattgatttcttgatagatcaata |
37132333 |
T |
|
| Q |
516 |
cttctcaaaatgagcttatcattcttgaatagtcgttctgtacctttccacatca |
570 |
Q |
| |
|
|| |||||||||||||||| |||||||||| | ||||| |||||||| ||||| |
|
|
| T |
37132332 |
ctcctcaaaatgagcttattattcttgaattgccgttccacacctttcctcatca |
37132278 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 324; E-Value: 0
Query Start/End: Original strand, 23 - 597
Target Start/End: Complemental strand, 37139914 - 37139337
Alignment:
| Q |
23 |
atgtctccaattacggctaagaaacaatgatccccataggccccaaaatcctgtgataaatcccaatgccacactcaaataaattggccttttatcttct |
122 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||||| || ||||||||||||| ||||| |||||||||||| ||||||||||| |
|
|
| T |
37139914 |
atgtctccaatttcggctaagaaacaatgatccccataggccccaaaatccagtcataaatcccaatgtcacacacaaataaattggttttttatcttct |
37139815 |
T |
|
| Q |
123 |
tgactactttcttcatgtgtttctggtttctgaggtgcaacttc---atctcttggacattttttgtcaagtggtttgccacaaagatcagcattccctt |
219 |
Q |
| |
|
||||| ||||||||||||||||||||||| ||| |||||||||| ||||| ||||||| |||| || |||||||| |||||||||||| |||| |||| |
|
|
| T |
37139814 |
tgacttctttcttcatgtgtttctggtttatgatgtgcaacttcttcatctcctggacatattttttcgagtggtttcccacaaagatcaacattgcctt |
37139715 |
T |
|
| Q |
220 |
cataacttgaggcatcgaaactctgtaactgggttccaattggaattcttccggacaggttgttattggacagatttaacatggaaaggcgatcaatttg |
319 |
Q |
| |
|
||||||||| |||||||||||||||||||| || ||||||||||||||||| || || ||||||| || ||||| |||| ||| |||||||||||||| |
|
|
| T |
37139714 |
gataacttgaagcatcgaaactctgtaactgcgtgccaattggaattcttccagagagattgttatcagatagattcaacacggacaggcgatcaatttg |
37139615 |
T |
|
| Q |
320 |
agttagagaatgaggaattaaaccagtgaaatggtttcttgacaagtcaagaaattcaagtgatgttaactttccaatcattgaagtaatttcccctgtc |
419 |
Q |
| |
|
|| ||||| | |||||||| ||||| ||||||||||||||||||||||||| | ||||||||| ||||| |||||||| | |||| |||||| |||||| |
|
|
| T |
37139614 |
agctagagtaggaggaattggaccagagaaatggtttcttgacaagtcaagagaatcaagtgatattaaccttccaatcttcgaaggaatttctcctgtc |
37139515 |
T |
|
| Q |
420 |
aaattgttgcttgataaattcaatgacaccaatgctatcaagtttcctatttcttctggaaggtctcctgtcaattgattgcttgatagatcaatgcttc |
519 |
Q |
| |
|
|| ||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||||| || | |
|
|
| T |
37139514 |
aacttgttgcatgataaattcaatgacaccaactctatcaagttttctatttcttctggaatgtctcctatcaattgattgcttgatagatcaatactcc |
37139415 |
T |
|
| Q |
520 |
tcaaaatgagcttatcattcttgaatagtcgttctgtacctttccacatcatcaatgcaaataaatcgtatccttcat |
597 |
Q |
| |
|
||||||||||||||| |||||||||||| |||||||| ||||||||||||| |||||||| |||||||| ||||||| |
|
|
| T |
37139414 |
tcaaaatgagcttattattcttgaatagccgttctgtccctttccacatcaacaatgcaatcaaatcgtagccttcat |
37139337 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 312; E-Value: 1e-175
Query Start/End: Original strand, 23 - 597
Target Start/End: Original strand, 35142591 - 35143165
Alignment:
| Q |
23 |
atgtctccaattacggctaagaaacaatgatccccataggccccaaaatcctgtgataaatcccaatgccacactcaaataaattggcctttt-atcttc |
121 |
Q |
| |
|
|||||||||||| ||| |||||||| || ||||| || ||| ||||||||||||||||||||||||||||| ||||||||||||| |||| |||||| |
|
|
| T |
35142591 |
atgtctccaattctggcagagaaacaaagagccccaaagtcccgaaaatcctgtgataaatcccaatgccacattcaaataaattggtttttttatcttc |
35142690 |
T |
|
| Q |
122 |
ttgactactttcttcatgtgtttctggtttctgaggtgcaacttcatctcttggacattttttgtcaagtggtttgccacaaagatcagcattcccttca |
221 |
Q |
| |
|
||||||||||| ||||||||||||||||||| || |||||||||| || |||||||||| ||||||||||||| |||||||||| |||| |||| | |
|
|
| T |
35142691 |
ttgactactttgttcatgtgtttctggtttcagatgtgcaacttcttcatatggacatttt-tgtcaagtggtttcccacaaagattgacattaccttta |
35142789 |
T |
|
| Q |
222 |
taacttgaggcatcgaaactctgtaactgggttccaattggaattcttccggacaggttgttattggacagatttaacatggaaaggcgatcaatttgag |
321 |
Q |
| |
|
||||| || |||||||||||||| ||||| || | |||||||||| |||| || |||||||||| ||||| ||| |||||||||||||||| |||||||| |
|
|
| T |
35142790 |
taactcgatgcatcgaaactctgcaactgcgtactaattggaatttttccagataggttgttatcggacacattcaacatggaaaggcgataaatttgag |
35142889 |
T |
|
| Q |
322 |
ttagagaatgaggaattaaaccagtgaaatggtttcttgacaagtcaagaaattcaagtgatgttaactttccaatcattgaagtaatttcccctgtcaa |
421 |
Q |
| |
|
||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| ||||| |
|
|
| T |
35142890 |
ctagagaaggaggaattaaaccagagaaattgtttcttgacaagtcaagaaattcaagtgatgttaaccttccaatctctgaagtaatttccccagtcaa |
35142989 |
T |
|
| Q |
422 |
attgttgcttgataaattcaatgacaccaatgctatcaagtttcctatttcttctggaaggtctcctgtcaattgattgcttgatagatcaatgcttctc |
521 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| ||||||||||||||||||| || ||| |
|
|
| T |
35142990 |
attgttgcttgataaattcaatgacaccaatgctatcaagtttcctatttcttccggaatgtctcctgtcaatagattgcttgatagatcaatactcctc |
35143089 |
T |
|
| Q |
522 |
aaaatgagcttatcattcttgaatagtcgttctgtacctttccacatcatcaatgcaaataaatcgtatccttcat |
597 |
Q |
| |
|
|||||||| |||| |||||||||||||||| ||| |||||||||||| | ||||||| ||||| || ||||||| |
|
|
| T |
35143090 |
aaaatgagtttattattcttgaatagtcgtgctgcacctttccacattaataatgcaaccaaatcatagccttcat |
35143165 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 45 - 597
Target Start/End: Complemental strand, 38749464 - 38748921
Alignment:
| Q |
45 |
aacaatgatcccc-ataggccccaaaatcctgtgataaatcccaatgccacactcaaataaattggccttttatcttcttgactactttcttcatgtgtt |
143 |
Q |
| |
|
||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| ||||||||||||| ||||| |
|
|
| T |
38749464 |
aacaatgatcccccatagtccccaaaatcctgtgataaatcccgatgccacactcaaataaattggttttttatcttctggactactttcttctggtgtt |
38749365 |
T |
|
| Q |
144 |
tctggtttctgaggtgcaacttcatctcttggacattttttgtcaagtggtttgccacaaagatcagcattcccttcataacttgaggcatcgaaactct |
243 |
Q |
| |
|
|||||||||| || ||| | |||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||| |||||||| |
|
|
| T |
38749364 |
tctggtttctcgggc----------ctcctagacattttttgtcaagtggtttctcacaaagatcaacattcccttcataatttgaggcattgaaactct |
38749275 |
T |
|
| Q |
244 |
gtaactgggttccaattggaattcttccggacaggttgttattggacagatttaacatggaaaggcgatcaatttgagttagagaatgaggaattaaacc |
343 |
Q |
| |
|
| ||||| || ||||||||||||||||| ||| | || |||| ||||||| |||| ||| || | |||||||| || ||||||| ||||||| ||||| |
|
|
| T |
38749274 |
gcaactgcgtgccaattggaattcttccagaccgattattatccaacagattcaacaaggacagacaatcaattttagctagagaaggaggaatcaaacc |
38749175 |
T |
|
| Q |
344 |
agtgaaatggtttcttgacaagtcaagaaattcaagtgatgttaactttccaatcattgaagtaatttcccctgtcaaattgttgcttgataaattcaat |
443 |
Q |
| |
|
|| ||||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||||||||||| || ||||||||||| ||||||||||||| |
|
|
| T |
38749174 |
agagaaatggtttcgtgacaagtcaagaaattcaagtgatgttaaccttccaatctttgaagtaatttctccattcaaattgttgtttgataaattcaac |
38749075 |
T |
|
| Q |
444 |
gacaccaatgctatcaagtttcctatttcttctggaaggtctcctgtcaattgattgcttgatagatcaatgcttctcaaaatgagcttatcattcttga |
543 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||| | |||| ||||||||||| ||||||||||||| ||||||||||||||||||| |||||||| |
|
|
| T |
38749074 |
gacaccaactctatcaagtttcctatttcttctggaatatttcctatcaattgattgtttgatagatcaatacttctcaaaatgagcttattattcttga |
38748975 |
T |
|
| Q |
544 |
atagtcgttctgtacctttccacatcatcaatgcaaataaatcgtatccttcat |
597 |
Q |
| |
|
|| |||||||| |||||||||||||| |||||||| ||||| || ||||||| |
|
|
| T |
38748974 |
attatcgttctgcacctttccacatcaataatgcaaagaaatcatagccttcat |
38748921 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 262; Significance: 1e-146; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 48 - 597
Target Start/End: Original strand, 3022337 - 3022877
Alignment:
| Q |
48 |
aatgatccccataggccccaaaatcctgtgataaatcccaatgccacactcaaataaattggccttttatcttcttgactactttcttcatgtgtttctg |
147 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| | |
|
|
| T |
3022337 |
aatgatccccatagtccccaaaatcctgtgataaatcccaatgccacactcaaataaattggttttttatcttctggactactttct------------g |
3022424 |
T |
|
| Q |
148 |
gtttctgaggtgcaacttcatc---tcttggacattttttgtcaagtggtttgccacaaagatcagcattcccttcataacttgaggcatcgaaactctg |
244 |
Q |
| |
|
|||||| || |||||||||| || ||||||| |||||||||||||||| |||||||||||| |||||||||||||| ||||||||| ||||||||| |
|
|
| T |
3022425 |
gtttctcgggcacaacttcatcatctcctggacatattttgtcaagtggtttcccacaaagatcaacattcccttcataatttgaggcattgaaactctg |
3022524 |
T |
|
| Q |
245 |
taactgggttccaattggaattcttccggacaggttgttattggacagatttaacatggaaaggcgatcaatttgagttagagaatgaggaattaaacca |
344 |
Q |
| |
|
| ||| || ||||||||||||||||| || || | |||| |||||||| |||| ||| | |||||| ||||||| ||||||| | ||||| |||||| |
|
|
| T |
3022525 |
cagctgcgtgccaattggaattcttccagagagataattatccgacagattcaacaaggacaagcgatctatttgagctagagaaggtggaatcaaacca |
3022624 |
T |
|
| Q |
345 |
gtgaaatggtttcttgacaagtcaagaaattcaagtgatgttaactttccaatcattgaagtaatttcccctgtcaaattgttgcttgataaattcaatg |
444 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| || ||||||||||| ||||||||||||| | |
|
|
| T |
3022625 |
gagaaatggtttcttgacaagtcaagaaattcaagtgatgttaaccttccaatctttgaagtaatttttccattcaaattgttgtttgataaattcaacg |
3022724 |
T |
|
| Q |
445 |
acaccaatgctatcaagtttcctatttcttctggaaggtctcctgtcaattgattgcttgatagatcaatgcttctcaaaatgagcttatcattcttgaa |
544 |
Q |
| |
|
||||||| | ||||||||||||||||||||||||| | |||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| |
|
|
| T |
3022725 |
acaccaactccatcaagtttcctatttcttctggaatatttcctatcaattgattgcttgatagatcaatacttctcaaaatgagcttattattcttgaa |
3022824 |
T |
|
| Q |
545 |
tagtcgttctgtacctttccacatcatcaatgcaaataaatcgtatccttcat |
597 |
Q |
| |
|
| ||||||||| |||||||||||||| |||||||| ||||| || ||||||| |
|
|
| T |
3022825 |
ttgtcgttctgcacctttccacatcaacaatgcaatcaaatcatagccttcat |
3022877 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 24 - 277
Target Start/End: Original strand, 11242361 - 11242617
Alignment:
| Q |
24 |
tgtctccaattacggctaagaaacaatgatccccataggccccaaaatcctgtgataaatcccaatgccacactcaaataaattggccttttatcttctt |
123 |
Q |
| |
|
||||||||||| ||| ||| | |||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||| | |||||||| |
|
|
| T |
11242361 |
tgtctccaattccggataaacagcaatgatccccaaaggccccaaaatcctgtaataaatcctaatgccacactcaaataaattgaattcatatcttctg |
11242460 |
T |
|
| Q |
124 |
gactactttcttcatgtgtttctggtttctgaggtgcaa---cttcatctcttggacattttttgtcaagtggtttgccacaaagatcagcattcccttc |
220 |
Q |
| |
|
|||||||||||||| ||||||||||| |||||||||| |||||||| | ||||| | |||||||||||||| ||| |||||||| |||| ||||| |
|
|
| T |
11242461 |
gactactttcttcaaaagtttctggtttttgaggtgcaatttcttcatcttcttgacatatgttgtcaagtggtttcccagaaagatcaacatttccttc |
11242560 |
T |
|
| Q |
221 |
ataacttgaggcatcgaaactctgtaactgggttccaattggaattcttccggacag |
277 |
Q |
| |
|
|||||||||||| ||||||||||| ||||| || |||||||||||||| ||||| |
|
|
| T |
11242561 |
ataacttgaggcgtcgaaactctgcaactgccagcctattggaattcttccagacag |
11242617 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 288 - 379
Target Start/End: Original strand, 11242613 - 11242701
Alignment:
| Q |
288 |
gacagatttaacatggaaaggcgatcaatttgagttagagaatgaggaattaaaccagtgaaatggtttcttgacaagtcaagaaattcaag |
379 |
Q |
| |
|
|||||||| |||| ||| ||||||||||||||| |||| ||||||||| | || ||||| |||||||||||||||||||||||||||| |
|
|
| T |
11242613 |
gacagattcaacaaggacaggcgatcaatttgacctaga---tgaggaattcgatcaatgaaacggtttcttgacaagtcaagaaattcaag |
11242701 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 49; Significance: 1e-18; HSPs: 11)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 354 - 518
Target Start/End: Original strand, 14014674 - 14014838
Alignment:
| Q |
354 |
tttcttgacaagtcaagaaattcaagtgatgttaactttccaatcattgaagtaatttcccctgtcaaattgttgcttgataaattcaatgacaccaatg |
453 |
Q |
| |
|
|||||||| || |||||||| ||||||||||||| ||||||||| |||||| ||||| ||| ||||| ||||| |||||||| ||||| || |||||| |
|
|
| T |
14014674 |
tttcttgagaaatcaagaaagtcaagtgatgttagctttccaatatttgaaggaattttccccgtcaagttgtttcttgataagttcaacgagaccaatt |
14014773 |
T |
|
| Q |
454 |
ctatcaagtttcctatttcttctggaaggtctcctgtcaattgattgcttgatagatcaatgctt |
518 |
Q |
| |
|
||||| ||| |||||||| ||||| ||| ||| || |||||||| |||||||| |||||| |
|
|
| T |
14014774 |
gaatcaaatttgctatttctggtggaatctcttctgagaagtgattgctggatagatctatgctt |
14014838 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 359 - 518
Target Start/End: Complemental strand, 13863366 - 13863207
Alignment:
| Q |
359 |
tgacaagtcaagaaattcaagtgatgttaactttccaatcattgaagtaatttcccctgtcaaattgttgcttgataaattcaatgacaccaatgctatc |
458 |
Q |
| |
|
|||||| |||||||||||||||||||||||| |||| || |||||| ||||| ||||||||| ||||| ||||||||||| | ||| |||||| ||| |
|
|
| T |
13863366 |
tgacaaatcaagaaattcaagtgatgttaaccttccgatatttgaaggaattttccctgtcaagttgtttcttgataaatttagtgagaccaattgaatc |
13863267 |
T |
|
| Q |
459 |
aagtttcctatttcttctggaaggtctcctgtcaattgattgcttgatagatcaatgctt |
518 |
Q |
| |
|
|| ||| ||||||| ||||| ||| | | || ||||||||||||||||| |||||| |
|
|
| T |
13863266 |
aaatttgctatttcaggtggaatctcttccgaaaagtgattgcttgatagatctatgctt |
13863207 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 354 - 452
Target Start/End: Original strand, 14024805 - 14024903
Alignment:
| Q |
354 |
tttcttgacaagtcaagaaattcaagtgatgttaactttccaatcattgaagtaatttcccctgtcaaattgttgcttgataaattcaatgacaccaat |
452 |
Q |
| |
|
|||| |||||| |||||||| ||||||||| ||||||||||||| |||||| ||||| |||||| || ||||| |||||||| |||||||| |||||| |
|
|
| T |
14024805 |
tttcgtgacaaatcaagaaagtcaagtgatattaactttccaattcttgaaggaattttccctgtgaagttgtttcttgataagttcaatgagaccaat |
14024903 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 354 - 452
Target Start/End: Complemental strand, 13875841 - 13875743
Alignment:
| Q |
354 |
tttcttgacaagtcaagaaattcaagtgatgttaactttccaatcattgaagtaatttcccctgtcaaattgttgcttgataaattcaatgacaccaat |
452 |
Q |
| |
|
||||| ||||| |||||||| ||||||||||||| ||||||||| |||||| ||||| |||||| || || || |||||||| |||||||| |||||| |
|
|
| T |
13875841 |
tttctagacaaatcaagaaagtcaagtgatgttagctttccaattcttgaaggaattttccctgtgaagttatttcttgataagttcaatgagaccaat |
13875743 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 354 - 452
Target Start/End: Original strand, 14110000 - 14110098
Alignment:
| Q |
354 |
tttcttgacaagtcaagaaattcaagtgatgttaactttccaatcattgaagtaatttcccctgtcaaattgttgcttgataaattcaatgacaccaat |
452 |
Q |
| |
|
|||| |||||| |||||||| ||||||||||||| |||||||| |||||| ||||| ||||||||| ||||| |||||||| ||||| || |||||| |
|
|
| T |
14110000 |
tttcgtgacaaatcaagaaagtcaagtgatgttagatttccaatatttgaaggaattttccctgtcaagttgtttcttgataagttcaacgagaccaat |
14110098 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 359 - 439
Target Start/End: Complemental strand, 13893540 - 13893460
Alignment:
| Q |
359 |
tgacaagtcaagaaattcaagtgatgttaactttccaatcattgaagtaatttcccctgtcaaattgttgcttgataaatt |
439 |
Q |
| |
|
|||||| |||||||| |||||||||||||| ||||| || |||||| ||||| ||||||||| ||||| ||||||||||| |
|
|
| T |
13893540 |
tgacaaatcaagaaagtcaagtgatgttaattttccgatatttgaaggaattttccctgtcaagttgtttcttgataaatt |
13893460 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 366 - 518
Target Start/End: Original strand, 14022254 - 14022406
Alignment:
| Q |
366 |
tcaagaaattcaagtgatgttaactttccaatcattgaagtaatttcccctgtcaaattgttgcttgataaattcaatgacaccaatgctatcaagtttc |
465 |
Q |
| |
|
|||||||| ||||||||||||| ||||||||| |||||| ||||| ||||| || ||||| |||||||| |||||||| |||||| ||||| || |
|
|
| T |
14022254 |
tcaagaaagtcaagtgatgttagctttccaatatttgaaggaatttttcctgtgaagttgtttcttgataagttcaatgagaccaattgaatcaaattcg |
14022353 |
T |
|
| Q |
466 |
ctatttcttctggaaggtctcctgtcaattgattgcttgatagatcaatgctt |
518 |
Q |
| |
|
||||||| ||||| ||||||| || ||||||||||| ||||| |||||| |
|
|
| T |
14022354 |
ctatttcaggtggaatctctcctgaaaagtgattgcttgagagatctatgctt |
14022406 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 366 - 518
Target Start/End: Original strand, 14084206 - 14084358
Alignment:
| Q |
366 |
tcaagaaattcaagtgatgttaactttccaatcattgaagtaatttcccctgtcaaattgttgcttgataaattcaatgacaccaatgctatcaagtttc |
465 |
Q |
| |
|
|||||||| |||||||||| || |||||||| |||||| ||||| |||||| || ||||| |||||||||||||| || |||||| ||||| ||| |
|
|
| T |
14084206 |
tcaagaaagtcaagtgatgctagatttccaatatttgaaggaattttccctgtgaagttgtttcttgataaattcaaagagaccaattgaatcaaatttg |
14084305 |
T |
|
| Q |
466 |
ctatttcttctggaaggtctcctgtcaattgattgcttgatagatcaatgctt |
518 |
Q |
| |
|
||||||| | ||||| ||||||| || ||||||||||| || || |||||| |
|
|
| T |
14084306 |
ctatttcatgtggaatctctcctgaaaagtgattgcttgagaggtctatgctt |
14084358 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 362 - 452
Target Start/End: Complemental strand, 13473521 - 13473431
Alignment:
| Q |
362 |
caagtcaagaaattcaagtgatgttaactttccaatcattgaagtaatttcccctgtcaaattgttgcttgataaattcaatgacaccaat |
452 |
Q |
| |
|
|||||||||||| ||||||||| ||| |||||||| |||||| ||||| |||||| |||||||| |||||||| ||||| || |||||| |
|
|
| T |
13473521 |
caagtcaagaaagtcaagtgatcttagttttccaatatttgaaggaattttccctgtaaaattgtttcttgataagttcaaagagaccaat |
13473431 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 360 - 452
Target Start/End: Original strand, 13931893 - 13931985
Alignment:
| Q |
360 |
gacaagtcaagaaattcaagtgatgttaactttccaatcattgaagtaatttcccctgtcaaattgttgcttgataaattcaatgacaccaat |
452 |
Q |
| |
|
||||| |||||| | |||||||| |||| |||||||| |||| | ||||| |||||| || ||||| ||||||||||||||||| |||||| |
|
|
| T |
13931893 |
gacaaatcaagagagtcaagtgaagttagatttccaatatttgatggaattttccctgtgaagttgtttcttgataaattcaatgagaccaat |
13931985 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 354 - 394
Target Start/End: Original strand, 13911386 - 13911426
Alignment:
| Q |
354 |
tttcttgacaagtcaagaaattcaagtgatgttaactttcc |
394 |
Q |
| |
|
|||| |||||| |||||||| |||||||||||||||||||| |
|
|
| T |
13911386 |
tttcgtgacaaatcaagaaagtcaagtgatgttaactttcc |
13911426 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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