View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5251_low_19 (Length: 239)
Name: NF5251_low_19
Description: NF5251
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5251_low_19 |
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Alignment Details
Target: chr1 (Bit Score: 112; Significance: 9e-57; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 21 - 132
Target Start/End: Complemental strand, 31961023 - 31960912
Alignment:
| Q |
21 |
aggccaaaactatgtactacttcaaattagaggatatgagaattccttatattcattacaagatttaccaagtacagactaaagatgtcctatatatggt |
120 |
Q |
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| T |
31961023 |
aggccaaaactatgtactacttcaaattagaggatatgagaattccttatattcattacaagatttaccaagtacagactaaagatgtcctatatatggt |
31960924 |
T |
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| Q |
121 |
ggaaccattctt |
132 |
Q |
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|||||||||||| |
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| T |
31960923 |
ggaaccattctt |
31960912 |
T |
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