View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5252_low_10 (Length: 250)

Name: NF5252_low_10
Description: NF5252
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5252_low_10
NF5252_low_10
[»] chr7 (19 HSPs)
chr7 (1-238)||(7620811-7621048)
chr7 (123-238)||(12560528-12560643)
chr7 (128-238)||(30226798-30226908)
chr7 (129-238)||(3285621-3285730)
chr7 (128-238)||(48796940-48797048)
chr7 (128-238)||(14976162-14976270)
chr7 (128-238)||(15405638-15405746)
chr7 (128-190)||(11629404-11629466)
chr7 (128-226)||(11559822-11559920)
chr7 (129-205)||(42783537-42783613)
chr7 (128-205)||(4793895-4793971)
chr7 (128-205)||(9567676-9567752)
chr7 (128-218)||(4541961-4542050)
chr7 (128-218)||(19295524-19295613)
chr7 (128-218)||(19353888-19353977)
chr7 (159-216)||(26193667-26193724)
chr7 (128-196)||(2077284-2077351)
chr7 (128-196)||(2083703-2083770)
chr7 (125-192)||(24050209-24050276)
[»] chr5 (11 HSPs)
chr5 (128-238)||(34404752-34404862)
chr5 (128-231)||(17920107-17920210)
chr5 (128-238)||(26182553-26182663)
chr5 (128-238)||(20497470-20497580)
chr5 (128-231)||(7897235-7897337)
chr5 (128-238)||(20287291-20287401)
chr5 (128-211)||(17660761-17660843)
chr5 (128-206)||(20127724-20127801)
chr5 (128-205)||(11205495-11205571)
chr5 (128-178)||(22130201-22130250)
chr5 (128-205)||(20740280-20740356)
[»] chr4 (11 HSPs)
chr4 (128-238)||(11324587-11324697)
chr4 (128-238)||(19894132-19894242)
chr4 (128-238)||(22555703-22555814)
chr4 (128-237)||(24143864-24143973)
chr4 (128-227)||(23541983-23542082)
chr4 (128-229)||(46738581-46738682)
chr4 (123-216)||(25353948-25354041)
chr4 (128-217)||(15687018-15687107)
chr4 (128-205)||(31971700-31971776)
chr4 (128-212)||(16654592-16654675)
chr4 (177-238)||(11905819-11905880)
[»] chr8 (9 HSPs)
chr8 (125-238)||(8730660-8730773)
chr8 (128-238)||(17880057-17880167)
chr8 (124-238)||(17280617-17280731)
chr8 (131-238)||(18676520-18676626)
chr8 (128-238)||(33465480-33465589)
chr8 (128-238)||(39081636-39081746)
chr8 (123-235)||(37154839-37154950)
chr8 (132-238)||(22876747-22876853)
chr8 (130-218)||(23250490-23250577)
[»] chr2 (8 HSPs)
chr2 (128-238)||(18605915-18606025)
chr2 (128-238)||(13314284-13314394)
chr2 (128-231)||(18766415-18766518)
chr2 (128-230)||(29566750-29566852)
chr2 (128-203)||(20068795-20068870)
chr2 (131-186)||(25347947-25348001)
chr2 (131-218)||(27111805-27111891)
chr2 (128-218)||(36397790-36397876)
[»] chr1 (6 HSPs)
chr1 (128-238)||(11084978-11085088)
chr1 (128-238)||(33063115-33063225)
chr1 (128-216)||(17038982-17039070)
chr1 (128-238)||(40312542-40312652)
chr1 (128-234)||(45598649-45598755)
chr1 (128-238)||(52436135-52436245)
[»] scaffold0328 (1 HSPs)
scaffold0328 (128-238)||(16290-16400)
[»] chr6 (9 HSPs)
chr6 (128-238)||(16136899-16137009)
chr6 (128-238)||(19216684-19216794)
chr6 (128-238)||(20003813-20003923)
chr6 (128-238)||(9385344-9385454)
chr6 (128-230)||(15002479-15002581)
chr6 (128-238)||(32452717-32452827)
chr6 (128-204)||(12444065-12444141)
chr6 (128-201)||(16308667-16308739)
chr6 (128-218)||(34639506-34639592)
[»] chr3 (11 HSPs)
chr3 (128-238)||(8749769-8749879)
chr3 (128-238)||(9037435-9037545)
chr3 (128-230)||(9030740-9030842)
chr3 (128-205)||(11560810-11560887)
chr3 (128-205)||(7478482-7478558)
chr3 (128-186)||(7495245-7495302)
chr3 (131-205)||(13920289-13920362)
chr3 (128-218)||(8225856-8225942)
chr3 (159-211)||(15674165-15674217)
chr3 (128-218)||(18477867-18477953)
chr3 (159-218)||(214422-214481)
[»] scaffold0143 (1 HSPs)
scaffold0143 (128-238)||(37027-37137)
[»] scaffold0022 (1 HSPs)
scaffold0022 (128-204)||(3884-3960)
[»] scaffold0645 (1 HSPs)
scaffold0645 (128-205)||(1808-1885)
[»] scaffold0032 (1 HSPs)
scaffold0032 (131-238)||(103636-103744)
[»] scaffold0064 (2 HSPs)
scaffold0064 (128-218)||(45265-45354)
scaffold0064 (128-218)||(52239-52328)
[»] scaffold0034 (1 HSPs)
scaffold0034 (128-205)||(50207-50283)
[»] scaffold0520 (1 HSPs)
scaffold0520 (128-218)||(5740-5829)
[»] scaffold0480 (1 HSPs)
scaffold0480 (128-218)||(11953-12042)


Alignment Details
Target: chr7 (Bit Score: 182; Significance: 2e-98; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 7621048 - 7620811
Alignment:
Q  1 ttgtttatcgaatgaaattcgtgtttgatagttctctacatggaagttgaaccttgtaactttcaaatccattttatattcaacacactttacctttcac 100  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7621048 ttgtttatcgaatgaaattcgtgtttgatagttctctatatggaagttgaaccttgtaactttcaaatccattttatattcaacacactttacctttcac 7620949  T
Q  101 ttgttttgatttgtttcattagtattcttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgcca 200  Q
     ||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||| |||||||||||||||||||| ||||||||||| ||    
T  7620948 ctgttttgatttgtttcattagcattcttgaatatttgtatattggcttcatttttgcctaaaataaatattcatgtgagatgttaaacacgatgtgtca 7620849  T
Q  201 acatcttggcatggttcacttgacctgcaccctgcctt 238  Q
    ||||| ||||| |||||  ||||| |||| ||||||||    
T  7620848 acatcctggcaaggttcggttgacatgcatcctgcctt 7620811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 123 - 238
Target Start/End: Original strand, 12560528 - 12560643
Alignment:
Q  123 tattcttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcttggcatggttcacttg 222  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||    
T  12560528 tattgttggatatttgtatattgacttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcctggcatggttcagttg 12560627  T
Q  223 acctgcaccctgcctt 238  Q
    |||| |||||||||||    
T  12560628 acctccaccctgcctt 12560643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 128 - 238
Target Start/End: Complemental strand, 30226908 - 30226798
Alignment:
Q  128 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcttggcatggttcacttgacctg 227  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| ||||||| |||| ||||||||    
T  30226908 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgggagatgttggacacgatgtgccaacatcctggcatgattcagttgacctg 30226809  T
Q  228 caccctgcctt 238  Q
    |||||||||||    
T  30226808 caccctgcctt 30226798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 129 - 238
Target Start/End: Original strand, 3285621 - 3285730
Alignment:
Q  129 tggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcttggcatggttcacttgacctgc 228  Q
    ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||||||||| |||||||||    
T  3285621 tggatatttgtatattgacttcacttttgcctaaaacaaatatttatgtgagatgttgaacacgatatgccaacatcctggcatggttcagttgacctgc 3285720  T
Q  229 accctgcctt 238  Q
    ||||||||||    
T  3285721 accctgcctt 3285730  T

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Target: chr7; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 128 - 238
Target Start/End: Original strand, 48796940 - 48797048
Alignment:
Q  128 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcttggcatggttcacttgacctg 227  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  48796940 ttggatatttgtatattggcttcacttttgcctaaaataaatattcatg--agatgttgaacacgatgtgccaacatcctggcatggttcagttgacctg 48797037  T
Q  228 caccctgcctt 238  Q
    |||||||||||    
T  48797038 caccctgcctt 48797048  T

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Target: chr7; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 128 - 238
Target Start/End: Complemental strand, 14976270 - 14976162
Alignment:
Q  128 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcttggcatggttcacttgacctg 227  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||  | |||||||||||||||||||||||| ||| |||||||||| | ||||| ||    
T  14976270 ttggatatttgtatattggcttcactttttcctaaaacaaatattc--gagagatgttgaacacgatgtgccaatatcctggcatggtttagttgacttg 14976173  T
Q  228 caccctgcctt 238  Q
    |||||||||||    
T  14976172 caccctgcctt 14976162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 128 - 238
Target Start/End: Complemental strand, 15405746 - 15405638
Alignment:
Q  128 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcttggcatggttcacttgacctg 227  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||  | |||||||||||||||||||||||| ||| |||||||||| | ||||| ||    
T  15405746 ttggatatttgtatattggcttcactttttcctaaaacaaatattc--gagagatgttgaacacgatgtgccaatatcctggcatggtttagttgacttg 15405649  T
Q  228 caccctgcctt 238  Q
    |||||||||||    
T  15405648 caccctgcctt 15405638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 128 - 190
Target Start/End: Complemental strand, 11629466 - 11629404
Alignment:
Q  128 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaaca 190  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11629466 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaaca 11629404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 128 - 226
Target Start/End: Original strand, 11559822 - 11559920
Alignment:
Q  128 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcttggcatggttcacttgacct 226  Q
    ||||||||||| || ||||| ||| |||||||||||||||||||||| ||||||||||| ||||||||| |||| ||| |||||||||| | |||||||    
T  11559822 ttggatatttgaatgttggcctcatttttgcctaaaacaaatattcaagtgagatgttggacacgatgttccaatatcctggcatggtttagttgacct 11559920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 129 - 205
Target Start/End: Complemental strand, 42783613 - 42783537
Alignment:
Q  129 tggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatc 205  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||  | |||||| |||||| |||| ||||||||    
T  42783613 tggatatttgtatgttggcttcacttttgcctaaaacaaatattcacttcagatgtggaacacaatgttccaacatc 42783537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 128 - 205
Target Start/End: Original strand, 4793895 - 4793971
Alignment:
Q  128 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatc 205  Q
    |||||||||||| | |||||||||||||||| ||||||||||||||||||| ||||||| | ||||||| ||||||||    
T  4793895 ttggatatttgtgtgttggcttcacttttgc-taaaacaaatattcatgtgtgatgttggatacgatgttccaacatc 4793971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 128 - 205
Target Start/End: Complemental strand, 9567752 - 9567676
Alignment:
Q  128 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatc 205  Q
    |||||||||||| | ||||| |||||||||| ||||||||||||||||||| ||||||| | ||||||| ||||||||    
T  9567752 ttggatatttgtgtgttggcctcacttttgc-taaaacaaatattcatgtgtgatgttggatacgatgttccaacatc 9567676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 128 - 218
Target Start/End: Original strand, 4541961 - 4542050
Alignment:
Q  128 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcttggcatggttca 218  Q
    |||| ||||||||  |||| | ||||||||| ||||||||||||||| ||| ||||||| |||| |||| |||||||| ||||||||||||    
T  4541961 ttggctatttgtaagttggttgcacttttgc-taaaacaaatattcaagtgtgatgttggacaccatgttccaacatcctggcatggttca 4542050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 128 - 218
Target Start/End: Complemental strand, 19295613 - 19295524
Alignment:
Q  128 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcttggcatggttca 218  Q
    |||||||||||| | ||||||||| | |||| ||||||||||| ||||||  ||||||| | ||||||| |||||||||||||| ||||||    
T  19295613 ttggatatttgtgtgttggcttcattattgc-taaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggcacggttca 19295524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 128 - 218
Target Start/End: Complemental strand, 19353977 - 19353888
Alignment:
Q  128 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcttggcatggttca 218  Q
    |||||||||||||||||||||||| |  ||| |||||||||||||||||   ||| ||| | ||||||| ||||||| |||||| ||||||    
T  19353977 ttggatatttgtatattggcttcattactgc-taaaacaaatattcatgcatgatattggatacgatgttccaacatgttggcacggttca 19353888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 159 - 216
Target Start/End: Original strand, 26193667 - 26193724
Alignment:
Q  159 ctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcttggcatggtt 216  Q
    |||||||||||| ||||||  ||||||| | ||||||| |||||||||||||||||||    
T  26193667 ctaaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggcatggtt 26193724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 196
Target Start/End: Complemental strand, 2077351 - 2077284
Alignment:
Q  128 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgt 196  Q
    |||||||||||||| ||||||||  ||||||||||||||||||||||| |  ||||| |||||| ||||    
T  2077351 ttggatatttgtatgttggcttct-ttttgcctaaaacaaatattcatatcggatgtggaacacaatgt 2077284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 196
Target Start/End: Complemental strand, 2083770 - 2083703
Alignment:
Q  128 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgt 196  Q
    |||||||||||||| ||||||||  ||||||||||||||||||||||| |  ||||| |||||| ||||    
T  2083770 ttggatatttgtatgttggcttct-ttttgcctaaaacaaatattcatatcggatgtggaacacaatgt 2083703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 125 - 192
Target Start/End: Complemental strand, 24050276 - 24050209
Alignment:
Q  125 ttcttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacg 192  Q
    |||||||| |||||||| |||  ||||||||| |||||||||||||||||  || ||||||| |||||    
T  24050276 ttcttggaaatttgtatgttgaattcactttttcctaaaacaaatattcaaatgtgatgttggacacg 24050209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 99; Significance: 6e-49; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 128 - 238
Target Start/End: Original strand, 34404752 - 34404862
Alignment:
Q  128 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcttggcatggttcacttgacctg 227  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  34404752 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcctggcatggttcagttgacctg 34404851  T
Q  228 caccctgcctt 238  Q
    |||||| ||||    
T  34404852 cacccttcctt 34404862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 128 - 231
Target Start/End: Original strand, 17920107 - 17920210
Alignment:
Q  128 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcttggcatggttcacttgacctg 227  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  17920107 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcctggcatggttcagttgacctg 17920206  T
Q  228 cacc 231  Q
    ||||    
T  17920207 cacc 17920210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 128 - 238
Target Start/End: Original strand, 26182553 - 26182663
Alignment:
Q  128 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcttggcatggttcacttgacctg 227  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  26182553 ttggatatttgtatattgacttcacttttgcctaaaacaaatattcataggagatgttgaacacgatgtgccaacatcctggcatggttcagttgacctg 26182652  T
Q  228 caccctgcctt 238  Q
    |||||||||||    
T  26182653 caccctgcctt 26182663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 128 - 238
Target Start/End: Original strand, 20497470 - 20497580
Alignment:
Q  128 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcttggcatggttcacttgacctg 227  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| ||| |||||||||||||||||| |||||||| ||||||||    
T  20497470 ttggatatttttatattggcttcacttttgcctaaaataaatattcatgtgagatgttgtacaagatgtgccaacatcttggtatggttcagttgacctg 20497569  T
Q  228 caccctgcctt 238  Q
    |||||||||||    
T  20497570 caccctgcctt 20497580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 128 - 231
Target Start/End: Original strand, 7897235 - 7897337
Alignment:
Q  128 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcttggcatggttcacttgacctg 227  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||| ||||||||    
T  7897235 ttggatatttgtatattggcgtcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgtcaacatcctggcat-gttcagttgacctg 7897333  T
Q  228 cacc 231  Q
    ||||    
T  7897334 cacc 7897337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 128 - 238
Target Start/End: Complemental strand, 20287401 - 20287291
Alignment:
Q  128 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcttggcatggttcacttgacctg 227  Q
    |||||||||||||| |||||||||||||||  ||||| |||||||||  ||||||||||||||  ||||||||||||| |||||||||||| |||||||     
T  20287401 ttggatatttgtatgttggcttcacttttgtataaaataaatattcaaatgagatgttgaacataatgtgccaacatcctggcatggttcagttgacctc 20287302  T
Q  228 caccctgcctt 238  Q
    |||||||||||    
T  20287301 caccctgcctt 20287291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 128 - 211
Target Start/End: Original strand, 17660761 - 17660843
Alignment:
Q  128 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcttggca 211  Q
    |||||||||||||||||||||||| | |||| |||||||||||||||||   ||||||| | ||||||| ||||||| ||||||    
T  17660761 ttggatatttgtatattggcttcattattgc-taaaacaaatattcatgcatgatgttggatacgatgttccaacatgttggca 17660843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 128 - 206
Target Start/End: Complemental strand, 20127801 - 20127724
Alignment:
Q  128 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatct 206  Q
    |||||||||||| | ||||| |||||||||| |||||||||||||||| | |||||||| | ||||||| |||||||||    
T  20127801 ttggatatttgtttgttggcctcacttttgc-taaaacaaatattcatttaagatgttggatacgatgttccaacatct 20127724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 205
Target Start/End: Complemental strand, 11205571 - 11205495
Alignment:
Q  128 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatc 205  Q
    |||||||||||||| ||||||||  ||||||||||||||||||||||| |  ||||| |||||| |||| || |||||    
T  11205571 ttggatatttgtatgttggcttct-ttttgcctaaaacaaatattcatatcggatgtggaacacaatgttccgacatc 11205495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 22130201 - 22130250
Alignment:
Q  128 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtg 178  Q
    |||||||||||| | ||||||||||||||  ||||||||||||||||||||    
T  22130201 ttggatatttgtgtgttggcttcactttt-tctaaaacaaatattcatgtg 22130250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 205
Target Start/End: Original strand, 20740280 - 20740356
Alignment:
Q  128 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatc 205  Q
    |||||||||| | | ||| ||||| |||||| ||||||||||||||||||| ||||||| | || |||| ||||||||    
T  20740280 ttggatatttatgtgttgacttcatttttgc-taaaacaaatattcatgtgtgatgttggatacaatgttccaacatc 20740356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 99; Significance: 6e-49; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 128 - 238
Target Start/End: Original strand, 11324587 - 11324697
Alignment:
Q  128 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcttggcatggttcacttgacctg 227  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||    
T  11324587 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgtacaagatgtgccaacatcttggcatggttcagttgacctg 11324686  T
Q  228 caccctgcctt 238  Q
    |||||||||||    
T  11324687 caccctgcctt 11324697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 128 - 238
Target Start/End: Original strand, 19894132 - 19894242
Alignment:
Q  128 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcttggcatggttcacttgacctg 227  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| ||||||||    
T  19894132 ttggatttttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcctggcatgattcagttgacctg 19894231  T
Q  228 caccctgcctt 238  Q
    |||||||||||    
T  19894232 caccctgcctt 19894242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 128 - 238
Target Start/End: Complemental strand, 22555814 - 22555703
Alignment:
Q  128 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcttggca-tggttcacttgacct 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||| |||||||    
T  22555814 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgtacaagatgtgccaacatcttggcattggttcagttgacct 22555715  T
Q  227 gcaccctgcctt 238  Q
    ||||||||||||    
T  22555714 gcaccctgcctt 22555703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 128 - 237
Target Start/End: Complemental strand, 24143973 - 24143864
Alignment:
Q  128 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcttggcatggttcacttgacctg 227  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| |||||||     
T  24143973 ttggatatttgtatattgacttcacttttgcctaaaacaaatattcatatgagatgttgaacacgatgtgccaacatcctggcatggttcagttgaccta 24143874  T
Q  228 caccctgcct 237  Q
    |||| |||||    
T  24143873 caccttgcct 24143864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 128 - 227
Target Start/End: Complemental strand, 23542082 - 23541983
Alignment:
Q  128 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcttggcatggttcacttgacctg 227  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| |||||||||||| ||||||||    
T  23542082 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacaagatgtgtcaacatcatggcatggttcaattgacctg 23541983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 128 - 229
Target Start/End: Original strand, 46738581 - 46738682
Alignment:
Q  128 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcttggcatggttcacttgacctg 227  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||||||||    
T  46738581 ttggatatttgtatattgtcttcacttttacctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcctgacatggttcagttgacctg 46738680  T
Q  228 ca 229  Q
    ||    
T  46738681 ca 46738682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 123 - 216
Target Start/End: Original strand, 25353948 - 25354041
Alignment:
Q  123 tattcttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcttggcatggtt 216  Q
    |||| |||||||||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||  |||||||||    
T  25353948 tattgttggatatttgtatattgccttcacttttgcctaaaatgaatattcatgtgagatgttgaacacgatgtgccaacatccaggcatggtt 25354041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 128 - 217
Target Start/End: Original strand, 15687018 - 15687107
Alignment:
Q  128 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcttggcatggttc 217  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| ||| ||||||| ||||||||| |||||||| |||||||||||    
T  15687018 ttggatatttgtatgttggcttcacttttgcctaaaacaaatattcaagtgtgatgttgtacacgatgttccaacatcctggcatggttc 15687107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 128 - 205
Target Start/End: Complemental strand, 31971776 - 31971700
Alignment:
Q  128 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatc 205  Q
    |||||||||||| | ||| |||||||||||| ||||| ||||||||||||| ||||||| | ||||||| ||||||||    
T  31971776 ttggatatttgtgtgttgacttcacttttgc-taaaataaatattcatgtgtgatgttgtatacgatgttccaacatc 31971700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 128 - 212
Target Start/End: Original strand, 16654592 - 16654675
Alignment:
Q  128 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcttggcat 212  Q
    |||||||||||| ||||||||||| | |||| ||||||||||||||||||  ||||||| | | | ||| |||||||||||||||    
T  16654592 ttggatatttgtgtattggcttcattattgc-taaaacaaatattcatgtacgatgttggatatgttgttccaacatcttggcat 16654675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 238
Target Start/End: Complemental strand, 11905880 - 11905819
Alignment:
Q  177 tgagatgttgaacacgatgtgccaacatcttggcatggttcacttgacctgcaccctgcctt 238  Q
    |||||||||| ||||||||| |||||||| |||||||||||| |||||| | ||| ||||||    
T  11905880 tgagatgttggacacgatgttccaacatcctggcatggttcagttgaccggtaccttgcctt 11905819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 98; Significance: 2e-48; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 125 - 238
Target Start/End: Complemental strand, 8730773 - 8730660
Alignment:
Q  125 ttcttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcttggcatggttcacttgac 224  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| |||||    
T  8730773 ttcttggatatttgtatattgacttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgacaacatcctggcatggttcagttgac 8730674  T
Q  225 ctgcaccctgcctt 238  Q
    ||||||||||||||    
T  8730673 ctgcaccctgcctt 8730660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 128 - 238
Target Start/End: Original strand, 17880057 - 17880167
Alignment:
Q  128 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcttggcatggttcacttgacctg 227  Q
    |||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  17880057 ttggatctttgtatattggcttcacttttgcctaaaacaaatatgcatgtgagatgttgaacacgatgtgccaacatcttggcatggttcagttgacctg 17880156  T
Q  228 caccctgcctt 238  Q
    |||| ||||||    
T  17880157 caccttgcctt 17880167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 124 - 238
Target Start/End: Complemental strand, 17280731 - 17280617
Alignment:
Q  124 attcttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcttggcatggttcacttga 223  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| |||||||||||| ||||    
T  17280731 attcttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacaagatgtgtcaacatcatggcatggttcagttga 17280632  T
Q  224 cctgcaccctgcctt 238  Q
    | || ||| ||||||    
T  17280631 cttgtaccttgcctt 17280617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 131 - 238
Target Start/End: Complemental strand, 18676626 - 18676520
Alignment:
Q  131 gatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcttggcatggttcacttgacctgcac 230  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| |||||||| ||    
T  18676626 gatatttgtatattgatttcacttttgcctaaaacaaatattcatgtgagatgttgagcacgatgtgccaacatcctggcatggttcagttgacctg-ac 18676528  T
Q  231 cctgcctt 238  Q
    ||||||||    
T  18676527 cctgcctt 18676520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 128 - 238
Target Start/End: Original strand, 33465480 - 33465589
Alignment:
Q  128 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcttggcatggttcacttgacctg 227  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||| |||||||||||| ||||||||    
T  33465480 ttggatatttgtatgttggcttcacttttgcctaaaa-aaatattcaagtgagatgttggacacgatgtgccaacatcctggcatggttcagttgacctg 33465578  T
Q  228 caccctgcctt 238  Q
    |||| ||||||    
T  33465579 caccttgcctt 33465589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 128 - 238
Target Start/End: Complemental strand, 39081746 - 39081636
Alignment:
Q  128 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcttggcatggttcacttgacctg 227  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||| ||||||| || ||||||| | ||||||||    
T  39081746 ttggatatttgtatattggcttcacttttgcctaaaataaatattcatgtgagatgttgaacacggcgtgtcaacatcctgacatggtttagttgacctg 39081647  T
Q  228 caccctgcctt 238  Q
    |||||||||||    
T  39081646 caccctgcctt 39081636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 123 - 235
Target Start/End: Original strand, 37154839 - 37154950
Alignment:
Q  123 tattcttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcttggcatggttcacttg 222  Q
    |||| |||||||| ||||||||||||||| |||| ||||||||||||||| |||  ||||||||||||||||||||||||||| |||||||||||| |||    
T  37154839 tattgttggatatatgtatattggcttcatttttacctaaaacaaatattaatgc-agatgttgaacacgatgtgccaacatcctggcatggttcagttg 37154937  T
Q  223 acctgcaccctgc 235  Q
    |||||||||||||    
T  37154938 acctgcaccctgc 37154950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 132 - 238
Target Start/End: Complemental strand, 22876853 - 22876747
Alignment:
Q  132 atatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcttggcatggttcacttgacctgcacc 231  Q
    |||||| ||| |||||||||||||||||||||||||||||| | ||||||||||| ||| ||||| |||||||| |||||||||||| |||| |||||||    
T  22876853 atatttatatgttggcttcacttttgcctaaaacaaatatttaagtgagatgttggacaagatgtcccaacatcctggcatggttcagttgatctgcacc 22876754  T
Q  232 ctgcctt 238  Q
     ||||||    
T  22876753 ttgcctt 22876747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 130 - 218
Target Start/End: Complemental strand, 23250577 - 23250490
Alignment:
Q  130 ggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcttggcatggttca 218  Q
    |||||||||| | |||||| ||||||| | || |||||||||||| ||| ||| ||| ||||||||| |||||||| ||||||||||||    
T  23250577 ggatatttgtgtgttggctgcactttttc-tacaacaaatattcaagtgtgatattggacacgatgttccaacatcctggcatggttca 23250490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 95; Significance: 1e-46; HSPs: 8)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 128 - 238
Target Start/End: Original strand, 18605915 - 18606025
Alignment:
Q  128 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcttggcatggttcacttgacctg 227  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||||    
T  18605915 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcctggcatagttcaattgacctg 18606014  T
Q  228 caccctgcctt 238  Q
    |||||| ||||    
T  18606015 caccctacctt 18606025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 128 - 238
Target Start/End: Original strand, 13314284 - 13314394
Alignment:
Q  128 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcttggcatggttcacttgacctg 227  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| ||| |||||||||||||||||| |||||||| ||||||||    
T  13314284 ttggatatttgtatgttggcttcacttttgcctaaaacaaatattcaagtgagatgttggacatgatgtgccaacatcttggaatggttcagttgacctg 13314383  T
Q  228 caccctgcctt 238  Q
    |||| ||||||    
T  13314384 caccttgcctt 13314394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 128 - 231
Target Start/End: Complemental strand, 18766518 - 18766415
Alignment:
Q  128 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcttggcatggttcacttgacctg 227  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| || ||||||||| ||||||||    
T  18766518 ttggatatttgtatattgacttcacttttgtctaaaacaaatattcatgtgagatgttgaacatgatgtgccaacatcctgccatggttcagttgacctg 18766419  T
Q  228 cacc 231  Q
    ||||    
T  18766418 cacc 18766415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 128 - 230
Target Start/End: Complemental strand, 29566852 - 29566750
Alignment:
Q  128 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcttggcatggttcacttgacctg 227  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||||||||| |||||||||||| ||||||||    
T  29566852 ttggatatttatatgttggcttcacttttgcctaaaacaaatattcaagtgagatgttggacacaatgtgccaacatcctggcatggttcagttgacctg 29566753  T
Q  228 cac 230  Q
    |||    
T  29566752 cac 29566750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 128 - 203
Target Start/End: Original strand, 20068795 - 20068870
Alignment:
Q  128 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaaca 203  Q
    |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||    
T  20068795 ttggatatttgtatattggcttcacttttgtctaaaacaaatatttatgtgagatgttgaaaacgatgtgccaaca 20068870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 186
Target Start/End: Complemental strand, 25348001 - 25347947
Alignment:
Q  131 gatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttg 186  Q
    ||||||| ||||||||| |||||||||| |||||||||||||||||  ||||||||    
T  25348001 gatatttatatattggcctcacttttgc-taaaacaaatattcatgcaagatgttg 25347947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 218
Target Start/End: Complemental strand, 27111891 - 27111805
Alignment:
Q  131 gatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcttggcatggttca 218  Q
    |||||||||||||||| |||| | |||| ||||||||||||||||    ||||||| | ||||||| |||||||| ||||| ||||||    
T  27111891 gatatttgtatattggtttcattattgc-taaaacaaatattcataaatgatgttggatacgatgttccaacatcctggcacggttca 27111805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 218
Target Start/End: Original strand, 36397790 - 36397876
Alignment:
Q  128 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcttggcatggttca 218  Q
    |||| ||||||  ||||||||||| | |||| ||||||||||| ||||||   |||||| | ||||||| |||||||||||||| ||||||    
T  36397790 ttgggtatttgggtattggcttcattgttgc-taaaacaaatactcatgt---atgttggatacgatgttccaacatcttggcacggttca 36397876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 95; Significance: 1e-46; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 128 - 238
Target Start/End: Original strand, 11084978 - 11085088
Alignment:
Q  128 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcttggcatggttcacttgacctg 227  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| || |||||    
T  11084978 ttggatatttatatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcctggcatggttcagttaacctg 11085077  T
Q  228 caccctgcctt 238  Q
    |||||||||||    
T  11085078 caccctgcctt 11085088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 128 - 238
Target Start/End: Complemental strand, 33063225 - 33063115
Alignment:
Q  128 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcttggcatggttcacttgacctg 227  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  33063225 ttggatatttgtatattagcttcacttttgtctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcctggcatggttcagttgacctg 33063126  T
Q  228 caccctgcctt 238  Q
    |||| ||||||    
T  33063125 caccttgcctt 33063115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 128 - 216
Target Start/End: Complemental strand, 17039070 - 17038982
Alignment:
Q  128 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcttggcatggtt 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  17039070 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatccaggcatggtt 17038982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 128 - 238
Target Start/End: Original strand, 40312542 - 40312652
Alignment:
Q  128 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcttggcatggttcacttgacctg 227  Q
    ||||||||||||| |||||||||||||||||||||||  |||||||||||||||||||| ||| |||||||||||||| |||||||||||| ||||||||    
T  40312542 ttggatatttgtagattggcttcacttttgcctaaaattaatattcatgtgagatgttgtacaagatgtgccaacatcctggcatggttcagttgacctg 40312641  T
Q  228 caccctgcctt 238  Q
    |||| ||||||    
T  40312642 caccttgcctt 40312652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 128 - 234
Target Start/End: Original strand, 45598649 - 45598755
Alignment:
Q  128 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcttggcatggttcacttgacctg 227  Q
    ||||||||||| ||||| |||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  45598649 ttggatatttgaatattagcttcatttttggctaaaacaaatatttatgtgagatgttgaacacgatgtgccaacatcctggcatggttcagttgacctg 45598748  T
Q  228 caccctg 234  Q
    |||||||    
T  45598749 caccctg 45598755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 128 - 238
Target Start/End: Original strand, 52436135 - 52436245
Alignment:
Q  128 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcttggcatggttcacttgacctg 227  Q
    ||||||||||||||||||||||   |||||||||||||||||||||| |||||||||||||||||||||||||||||| | |||||||||| ||||||||    
T  52436135 ttggatatttgtatattggctttgtttttgcctaaaacaaatattcaagtgagatgttgaacacgatgtgccaacatccttgcatggttcagttgacctg 52436234  T
Q  228 caccctgcctt 238  Q
    |||| ||||||    
T  52436235 caccttgcctt 52436245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 128 - 238
Target Start/End: Original strand, 16290 - 16400
Alignment:
Q  128 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcttggcatggttcacttgacctg 227  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | |||||||||| || |||||    
T  16290 ttggatatttgtatattggcttcacttttgcctaaaataaatattcatgtgagatgttgaacacgatgtgccaacatcctagcatggttcaattaacctg 16389  T
Q  228 caccctgcctt 238  Q
    |||||||||||    
T  16390 caccctgcctt 16400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 91; Significance: 3e-44; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 128 - 238
Target Start/End: Original strand, 16136899 - 16137009
Alignment:
Q  128 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcttggcatggttcacttgacctg 227  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||||||||    
T  16136899 ttggatatttgtatattggcttcacttttgccaaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcctgtcatggttcagttgacctg 16136998  T
Q  228 caccctgcctt 238  Q
    ||| |||||||    
T  16136999 cactctgcctt 16137009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 128 - 238
Target Start/End: Complemental strand, 19216794 - 19216684
Alignment:
Q  128 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcttggcatggttcacttgacctg 227  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| |||||||||| | ||||||||    
T  19216794 ttggatatttgtctattggcttcacttttgcctaaaataaatattcatgtgagatgttgaacacgatgtgccaatatcctggcatggttaagttgacctg 19216695  T
Q  228 caccctgcctt 238  Q
    |||||||||||    
T  19216694 caccctgcctt 19216684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 128 - 238
Target Start/End: Complemental strand, 20003923 - 20003813
Alignment:
Q  128 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcttggcatggttcacttgacctg 227  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| ||||||| | |||||||| | ||||| ||    
T  20003923 ttggatatttgtatattggcttcacttttgcctaaaagaaatattcatgtgggatgttgaacacgatgtgtcaacatcctagcatggtttagttgacttg 20003824  T
Q  228 caccctgcctt 238  Q
    |||| ||||||    
T  20003823 caccttgcctt 20003813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 128 - 238
Target Start/End: Complemental strand, 9385454 - 9385344
Alignment:
Q  128 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcttggcatggttcacttgacctg 227  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||   |||||||||| ||||||||    
T  9385454 ttggatatttgtatattggattcacttttgcttaaaacaaatattcaagtgagatgttggacacgatgtgccaacatccctgcatggttcagttgacctg 9385355  T
Q  228 caccctgcctt 238  Q
     ||| ||||||    
T  9385354 gaccttgcctt 9385344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 128 - 230
Target Start/End: Original strand, 15002479 - 15002581
Alignment:
Q  128 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcttggcatggttcacttgacctg 227  Q
    |||||||||||||| |||| |||  |||||||||||||||||||||| ||||||||||| |||||||||||||||||| |||||||||||| ||||||||    
T  15002479 ttggatatttgtatgttggtttcttttttgcctaaaacaaatattcaagtgagatgttggacacgatgtgccaacatcgtggcatggttcagttgacctg 15002578  T
Q  228 cac 230  Q
    |||    
T  15002579 cac 15002581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 128 - 238
Target Start/End: Complemental strand, 32452827 - 32452717
Alignment:
Q  128 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcttggcatggttcacttgacctg 227  Q
    |||||||||||||| ||| |||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||| |||||||||||| ||||| ||    
T  32452827 ttggatatttgtatgttgccttcacttttgcctaaaataaatattcaagtgagatgttggacacgatgtgccaacatcctggcatggttcagttgacatg 32452728  T
Q  228 caccctgcctt 238  Q
    || | ||||||    
T  32452727 catcttgcctt 32452717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 128 - 204
Target Start/End: Original strand, 12444065 - 12444141
Alignment:
Q  128 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacat 204  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  12444065 ttggatatttgtatattggcttcacttttgcctaaaacgaatattcatgtgagatgttgaacatgatgtgccaacat 12444141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 128 - 201
Target Start/End: Original strand, 16308667 - 16308739
Alignment:
Q  128 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaa 201  Q
    |||||||||||| | |||||||||||||||| ||||||||||||||||||| ||||||| | ||||||| ||||    
T  16308667 ttggatatttgtgtgttggcttcacttttgc-taaaacaaatattcatgtgtgatgttggatacgatgttccaa 16308739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 218
Target Start/End: Original strand, 34639506 - 34639592
Alignment:
Q  128 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcttggcatggttca 218  Q
    |||| |||||| |||||||||| | | |||| ||||||||||| ||||||   |||||| | ||||||| |||||||||||||| ||||||    
T  34639506 ttgggtatttggatattggctttattgttgc-taaaacaaatactcatgt---atgttggatacgatgttccaacatcttggcacggttca 34639592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 91; Significance: 3e-44; HSPs: 11)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 128 - 238
Target Start/End: Complemental strand, 8749879 - 8749769
Alignment:
Q  128 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcttggcatggttcacttgacctg 227  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||| ||    
T  8749879 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacatgatgtgccaacatcctggcatggttcagttgacttg 8749780  T
Q  228 caccctgcctt 238  Q
    |||| ||||||    
T  8749779 caccttgcctt 8749769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 128 - 238
Target Start/End: Complemental strand, 9037545 - 9037435
Alignment:
Q  128 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcttggcatggttcacttgacctg 227  Q
    ||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||    
T  9037545 ttggatatttgtacattggtttcacttttgcctcaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcctggcatggttcagttgacgtg 9037446  T
Q  228 caccctgcctt 238  Q
    |||| ||||||    
T  9037445 caccttgcctt 9037435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 128 - 230
Target Start/End: Original strand, 9030740 - 9030842
Alignment:
Q  128 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcttggcatggttcacttgacctg 227  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| |||||||||||| |||| |||    
T  9030740 ttggatatttatatattggcttcacttttgcctaaaacaaatattcatgtgagatattgaacacgatgtgtcaacatcctggcatggttcagttgatctg 9030839  T
Q  228 cac 230  Q
    |||    
T  9030840 cac 9030842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 128 - 205
Target Start/End: Original strand, 11560810 - 11560887
Alignment:
Q  128 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatc 205  Q
    |||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  11560810 ttggatgtttgtatattggcttcacttttgcttaaaacgaatattcatgtgagatgttgaacacgatgtgccaacatc 11560887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 128 - 205
Target Start/End: Original strand, 7478482 - 7478558
Alignment:
Q  128 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatc 205  Q
    |||||||||||| | ||||||| |||||||| ||||||||||||||||||| ||||||| | ||||||| ||||||||    
T  7478482 ttggatatttgtgtgttggctttacttttgc-taaaacaaatattcatgtgtgatgttggatacgatgttccaacatc 7478558  T

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Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 128 - 186
Target Start/End: Original strand, 7495245 - 7495302
Alignment:
Q  128 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttg 186  Q
    |||||||||||| | |||||||||||||||| ||||||||||||||||||| |||||||    
T  7495245 ttggatatttgtgtgttggcttcacttttgc-taaaacaaatattcatgtgtgatgttg 7495302  T

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Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 131 - 205
Target Start/End: Complemental strand, 13920362 - 13920289
Alignment:
Q  131 gatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatc 205  Q
    ||||||||| | |||||||||||||||| ||||||||||||||||||| ||||||| | ||||||| | ||||||    
T  13920362 gatatttgtgtgttggcttcacttttgc-taaaacaaatattcatgtgtgatgttggatacgatgttctaacatc 13920289  T

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Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 218
Target Start/End: Complemental strand, 8225942 - 8225856
Alignment:
Q  128 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcttggcatggttca 218  Q
    |||| ||||||  ||||||||||| |||||| ||||||||||| ||||||   |||||| | ||||||| |||||||||||||| ||||||    
T  8225942 ttgggtatttgggtattggcttcatttttgc-taaaacaaatactcatgt---atgttggatacgatgttccaacatcttggcacggttca 8225856  T

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Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 211
Target Start/End: Original strand, 15674165 - 15674217
Alignment:
Q  159 ctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcttggca 211  Q
    |||||||||||| |||||| |||||||| | ||||||| ||||||||||||||    
T  15674165 ctaaaacaaatactcatgtaagatgttggatacgatgtcccaacatcttggca 15674217  T

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Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 218
Target Start/End: Complemental strand, 18477953 - 18477867
Alignment:
Q  128 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcttggcatggttca 218  Q
    |||| |||||| |||||||||||| | |||| ||||||||||| ||||||   |||||| | ||||||| |||||||||||||| ||||||    
T  18477953 ttgggtatttggatattggcttcattgttgc-taaaacaaatactcatgt---atgttggatacgatgttccaacatcttggcacggttca 18477867  T

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Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 218
Target Start/End: Original strand, 214422 - 214481
Alignment:
Q  159 ctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcttggcatggttca 218  Q
    |||||||||||| ||||||  ||||||| | ||||||| |||||||||||||| ||||||    
T  214422 ctaaaacaaatactcatgtatgatgttggatacgatgttccaacatcttggcacggttca 214481  T

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Target: scaffold0143 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0143
Description:

Target: scaffold0143; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 128 - 238
Target Start/End: Complemental strand, 37137 - 37027
Alignment:
Q  128 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcttggcatggttcacttgacctg 227  Q
    |||||||||||||| |||||||||||||||||||||| ||  ||||| ||||||||||| |||||||||||||||||| |||||||||||| ||||||||    
T  37137 ttggatatttgtatgttggcttcacttttgcctaaaaaaataattcaagtgagatgttggacacgatgtgccaacatcctggcatggttcagttgacctg 37038  T
Q  228 caccctgcctt 238  Q
    |||| ||||||    
T  37037 caccttgcctt 37027  T

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Target: scaffold0022 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 128 - 204
Target Start/End: Complemental strand, 3960 - 3884
Alignment:
Q  128 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacat 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  3960 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaagacgatgtaccaacat 3884  T

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Target: scaffold0645 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0645
Description:

Target: scaffold0645; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 128 - 205
Target Start/End: Complemental strand, 1885 - 1808
Alignment:
Q  128 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatc 205  Q
    |||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  1885 ttggatgtttgtatattggcttcacttttgcttaaaacgaatattcatgtgagatgttgaacacgatgtgccaacatc 1808  T

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Target: scaffold0032 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 131 - 238
Target Start/End: Complemental strand, 103744 - 103636
Alignment:
Q  131 gatatttgtatattggcttcacttttgcctaaaacaaatattc-atgtgagatgttgaacacgatgtgccaacatcttggcatggttcacttgacctgca 229  Q
    |||||||| || ||||||||||||||||||||||||||||||| | ||||||||||| | | || || || ||||| |||||||||||| ||||||||||    
T  103744 gatatttgaatgttggcttcacttttgcctaaaacaaatattcaaagtgagatgttggatatgacgttcctacatcctggcatggttcagttgacctgca 103645  T
Q  230 ccctgcctt 238  Q
    || ||||||    
T  103644 ccttgcctt 103636  T

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Target: scaffold0064 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 128 - 218
Target Start/End: Original strand, 45265 - 45354
Alignment:
Q  128 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcttggcatggttca 218  Q
    |||||||||||| | ||| |||||||||| | ||||||||||||||||||  ||||||| | ||||||| |||||||||||||||||||||    
T  45265 ttggatatttgtgtgttgacttcactttttc-taaaacaaatattcatgtatgatgttggatacgatgttccaacatcttggcatggttca 45354  T

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Target: scaffold0064; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 128 - 218
Target Start/End: Original strand, 52239 - 52328
Alignment:
Q  128 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcttggcatggttca 218  Q
    |||||||||||| | ||||||||||||||||  |||||||||||||||||  ||||||| | ||||||| |||||||||||| | ||||||    
T  52239 ttggatatttgtgtgttggcttcacttttgca-aaaacaaatattcatgtatgatgttggatacgatgttccaacatcttggtacggttca 52328  T

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Target: scaffold0034 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 128 - 205
Target Start/End: Original strand, 50207 - 50283
Alignment:
Q  128 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatc 205  Q
    |||||||||||| | |||||||||||||||| ||||||||||||||||||| ||||||| | ||||||| ||||||||    
T  50207 ttggatatttgtgtgttggcttcacttttgc-taaaacaaatattcatgtgtgatgttggatacgatgttccaacatc 50283  T

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Target: scaffold0520 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0520
Description:

Target: scaffold0520; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 128 - 218
Target Start/End: Complemental strand, 5829 - 5740
Alignment:
Q  128 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcttggcatggttca 218  Q
    ||||||||||| ||||| ||||||||||| |||||||||||||||||| |  ||||||| | | ||||| |||||||| ||||||||||||    
T  5829 ttggatatttgaatattagcttcactttt-cctaaaacaaatattcatatatgatgttggatatgatgttccaacatcctggcatggttca 5740  T

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Target: scaffold0480 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 128 - 218
Target Start/End: Complemental strand, 12042 - 11953
Alignment:
Q  128 ttggatatttgtatattggcttcacttttgcctaaaacaaatattcatgtgagatgttgaacacgatgtgccaacatcttggcatggttca 218  Q
    |||||||||||||| ||| || ||||||||| ||||||||||| ||| ||| ||||||| |||||||||  ||||||| ||||| ||||||    
T  12042 ttggatatttgtatgttgactgcacttttgc-taaaacaaataatcaagtgtgatgttggacacgatgtttcaacatcctggcacggttca 11953  T

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