View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5253_high_9 (Length: 266)
Name: NF5253_high_9
Description: NF5253
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5253_high_9 |
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Alignment Details
Target: chr5 (Bit Score: 244; Significance: 1e-135; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 1 - 256
Target Start/End: Original strand, 2654956 - 2655211
Alignment:
| Q |
1 |
cctcttttgtatttcaagctttctctcttatgaaaaggtattcgcaaaacaatagtagcactttcaaggctagaagcattcagagttttcgaagcatctt |
100 |
Q |
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| T |
2654956 |
cctcttttgtatttcaagctttctctcttatgaaaaggtattcgcaaaacaatagcagcactttcaaggctagaagcattcagagttttcgaagcatctt |
2655055 |
T |
|
| Q |
101 |
gtttgctgtaagactttttctttggtataatactttttcttgaatgagtaaaatcatacaacacaaattctgtaaccatatagtttccaattactccatc |
200 |
Q |
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| T |
2655056 |
gtttgctgtaagactttttctttggtataacactttttcttgaatgagtaaaatcatacaacacaaattctgtaaccatatagtttccaattactccatc |
2655155 |
T |
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| Q |
201 |
ttctaattcagaacataaactacaagaaactaccatctgtgctaccattgatgatg |
256 |
Q |
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|||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
2655156 |
ttctaattcagaacataaactacaagaaactagcatctgtgctaccattgatgatg |
2655211 |
T |
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