View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5255_high_25 (Length: 316)
Name: NF5255_high_25
Description: NF5255
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5255_high_25 |
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Alignment Details
Target: chr1 (Bit Score: 287; Significance: 1e-161; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 11 - 301
Target Start/End: Original strand, 8062761 - 8063051
Alignment:
| Q |
11 |
cagagacaaagaaattacgatgttttggattggtcagaaagggaagttgaaactgctgaaattcttgctttattatatcatcgtttctctttgttgagta |
110 |
Q |
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| T |
8062761 |
cagagacaaagaaattacgatgttttggattggtcagaaagggaagttgaaactgctgaaattcttgctttattatatcatcgtttctctttgttgagta |
8062860 |
T |
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| Q |
111 |
gtgtaacatactcatgggggtgtaaaaagcagagatctgcaattcaaaacaacccttcttcttatggcggcgccgccgttcttcctccttctgctgatgc |
210 |
Q |
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| T |
8062861 |
gtgtaacatactcatgggggtgtaaaaagcagagatctgcaattcaaaacaacccttcttcttatggcggcgccgccgttcttcctccttcttctgatgc |
8062960 |
T |
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| Q |
211 |
cggaaaagctcaagcttcaagtcctgctacccctctttcatttccagccactgaatcagatgacaaaactaaacctttcaaaaacaaagtt |
301 |
Q |
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| T |
8062961 |
cggaaaagctcaagcttcaagtcctgctacccctctttcatttccagccactgaatcagatgacaaaactaaacctttcaaaaacaaagtt |
8063051 |
T |
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