View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5255_high_43 (Length: 256)
Name: NF5255_high_43
Description: NF5255
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5255_high_43 |
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Alignment Details
Target: chr7 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 25334097 - 25333859
Alignment:
| Q |
1 |
gtgttcattacgcatagattaaaccagataaaattctaaacgagtattggagatctttattttgtatccgatctttggttaaccatgttatttacatttt |
100 |
Q |
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| T |
25334097 |
gtgttcattacgcatagattaaaccagataaaattctaaacgagtattggagatctttattttgtatccgatctttggttaaccatgttatttacatttt |
25333998 |
T |
|
| Q |
101 |
ttaggttatcgtcttattagtctgaaatttccaacactatgtaaaaatgactaatcactattgagaaacttgtgaagcatataagatgtgtttttctatc |
200 |
Q |
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|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
25333997 |
ttaggttatcgtcttattagtccaaaatttccaacactatgtaaaaatgactaatcactattgagaaacttgtgaagtatataagatgtgtttttctatc |
25333898 |
T |
|
| Q |
201 |
gcaactgaactttcatacatacgcacgagtcagaaatca |
239 |
Q |
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||||||||||||||||||||||||||||||||||||||| |
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| T |
25333897 |
gcaactgaactttcatacatacgcacgagtcagaaatca |
25333859 |
T |
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