View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5255_low_34 (Length: 272)
Name: NF5255_low_34
Description: NF5255
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5255_low_34 |
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Alignment Details
Target: chr6 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 17 - 262
Target Start/End: Original strand, 33428314 - 33428559
Alignment:
| Q |
17 |
aagaggcagatccctaaataacgtaaagtaacaaaatcataatatttttctttttaatcttaacacctttgtattatattctgtcgtctaattaagcaac |
116 |
Q |
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| T |
33428314 |
aagaggcagatccctaaataacgtaaagtaacaaaatcataatatttttctttttaatcttaacacctttgtattatattctgtcgtctaattaagcaac |
33428413 |
T |
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| Q |
117 |
aaatgacatgcttttgttggggtttgtggggtccattgtaatatgctagggttcacatgtctggccaacaaattggaggctattcttattccaccacaca |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33428414 |
aaatgacatgcttttgttggggtttgtggggtccattgtaatttgctagggttcacatgtctggccaacaaattggaggctattcttattccaccacaca |
33428513 |
T |
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| Q |
217 |
tacaactcataagatatatgattatgacccacatagttcaatagaa |
262 |
Q |
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||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
33428514 |
tacaactcataagatatattattatgacccacatagttcaatagaa |
33428559 |
T |
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