View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5255_low_40 (Length: 262)

Name: NF5255_low_40
Description: NF5255
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5255_low_40
NF5255_low_40
[»] chr1 (9 HSPs)
chr1 (10-244)||(4366449-4366683)
chr1 (13-231)||(21855350-21855568)
chr1 (13-218)||(17560753-17560958)
chr1 (77-210)||(39379049-39379182)
chr1 (80-197)||(4570879-4570996)
chr1 (77-214)||(10218934-10219071)
chr1 (126-236)||(4014924-4015037)
chr1 (13-215)||(4016755-4016957)
chr1 (93-149)||(17953710-17953766)
[»] chr3 (1 HSPs)
chr3 (13-228)||(3625619-3625834)
[»] chr4 (11 HSPs)
chr4 (7-228)||(3560928-3561149)
chr4 (70-197)||(3565686-3565813)
chr4 (70-197)||(3557668-3557795)
chr4 (13-189)||(1686294-1686470)
chr4 (122-216)||(11970964-11971058)
chr4 (122-207)||(53774834-53774919)
chr4 (122-217)||(11981664-11981759)
chr4 (128-215)||(53430082-53430169)
chr4 (118-231)||(53790543-53790656)
chr4 (90-204)||(8443448-8443562)
chr4 (97-209)||(19359106-19359218)
[»] chr7 (39 HSPs)
chr7 (8-218)||(29874390-29874601)
chr7 (47-218)||(29921973-29922144)
chr7 (76-218)||(29867187-29867326)
chr7 (16-230)||(29859342-29859556)
chr7 (13-218)||(29881141-29881346)
chr7 (13-200)||(29106693-29106886)
chr7 (7-210)||(29895345-29895550)
chr7 (35-215)||(29454086-29454266)
chr7 (6-213)||(29476325-29476532)
chr7 (13-205)||(29899253-29899451)
chr7 (80-185)||(29445669-29445774)
chr7 (13-151)||(29885133-29885271)
chr7 (129-226)||(660819-660916)
chr7 (10-158)||(29920083-29920231)
chr7 (128-215)||(14076678-14076765)
chr7 (128-215)||(14386706-14386793)
chr7 (117-209)||(24010372-24010464)
chr7 (85-218)||(29430981-29431111)
chr7 (90-208)||(19344565-19344683)
chr7 (122-207)||(23993529-23993614)
chr7 (117-209)||(24002188-24002280)
chr7 (117-212)||(24035740-24035835)
chr7 (128-218)||(19351049-19351139)
chr7 (139-208)||(46769382-46769451)
chr7 (97-208)||(15443933-15444044)
chr7 (97-208)||(36260222-36260333)
chr7 (118-175)||(9807814-9807871)
chr7 (97-178)||(22100462-22100543)
chr7 (137-213)||(24385210-24385286)
chr7 (94-178)||(26256741-26256825)
chr7 (118-178)||(36263043-36263103)
chr7 (97-216)||(22080837-22080956)
chr7 (128-219)||(22520243-22520334)
chr7 (137-199)||(19604462-19604524)
chr7 (100-210)||(24016760-24016870)
chr7 (145-214)||(6864791-6864860)
chr7 (128-221)||(20058034-20058127)
chr7 (129-210)||(26217968-26218049)
chr7 (117-209)||(12819905-12819997)
[»] chr5 (3 HSPs)
chr5 (13-231)||(24330866-24331084)
chr5 (137-215)||(18964813-18964891)
chr5 (63-196)||(29597554-29597687)
[»] chr6 (4 HSPs)
chr6 (139-214)||(17369675-17369750)
chr6 (121-216)||(20770643-20770738)
chr6 (81-197)||(6947881-6947997)
chr6 (37-147)||(24254477-24254587)
[»] scaffold0242 (2 HSPs)
scaffold0242 (8-213)||(13715-13920)
scaffold0242 (8-213)||(22550-22755)
[»] chr2 (1 HSPs)
chr2 (89-218)||(14514861-14514990)
[»] chr8 (1 HSPs)
chr8 (122-210)||(27618485-27618573)
[»] scaffold0649 (1 HSPs)
scaffold0649 (94-177)||(5404-5487)
[»] scaffold0867 (1 HSPs)
scaffold0867 (97-178)||(4689-4770)
[»] scaffold0464 (1 HSPs)
scaffold0464 (128-218)||(8061-8151)


Alignment Details
Target: chr1 (Bit Score: 235; Significance: 1e-130; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 10 - 244
Target Start/End: Complemental strand, 4366683 - 4366449
Alignment:
Q  10 acagagacatacaatcaatacttgctgcctcgtggttttgaagaagtgccacctactgaaccaacagttggtgtgttgggggactgcctttgtttttctt 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4366683 acagagacatacaatcaatacttgctgcctcgtggttttgaagaagtgccacctactgaaccaacagttggtgtgttgggggactgcctttgtttttctt 4366584  T
Q  110 attcttacaagaaaactgattttgttttatggcagatgaagaaattcggggttgaagagtcttggactccatttcttaaagttagttaccagaatcttca 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4366583 attcttacaagaaaactgattttgttttatggcagatgaagaaattcggggttgaagagtcttggactccatttcttaaagttagttaccagaatcttca 4366484  T
Q  210 aatagattacaactttagtgacgatgagatgaagt 244  Q
    |||||||||||||||||||||||||||||||||||    
T  4366483 aatagattacaactttagtgacgatgagatgaagt 4366449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 13 - 231
Target Start/End: Complemental strand, 21855568 - 21855350
Alignment:
Q  13 gagacatacaatcaatacttgctgcctcgtggttttgaagaagtgccacctactgaaccaacagttggtgtgttgggggactgcctttgtttttcttatt 112  Q
    |||||||||||||||||| |  |||||| ||||||||| ||||| || || |  || |||||  ||||||| ||| ||| ||| ||||||||||| ||||    
T  21855568 gagacatacaatcaatacattatgcctcatggttttgatgaagttccgccgaaagagccaactattggtgtattgaggggctgtctttgtttttcatatt 21855469  T
Q  113 cttacaagaaaactgattttgttttatggcagatgaagaaattcggggttgaagagtcttggactccatttcttaaagttagttaccagaatcttcaaat 212  Q
    | |||||| |||| ||||||||| ||||| |||||||| |||| ||||||||||| |||||||||| | | ||||||||||||||||| ||||||| |||    
T  21855468 cgtacaaggaaaccgattttgttatatgggagatgaaggaatttggggttgaagattcttggactcaactccttaaagttagttaccataatcttctaat 21855369  T
Q  213 agattacaactttagtgac 231  Q
    ||||||  |||||||||||    
T  21855368 agattatgactttagtgac 21855350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 13 - 218
Target Start/End: Complemental strand, 17560958 - 17560753
Alignment:
Q  13 gagacatacaatcaatacttgctgcctcgtggttttgaagaagtgccacctactgaaccaacagttggtgtgttgggggactgcctttgtttttcttatt 112  Q
    |||||||||||| | |||||  ||||||||| |||||| || |||||| | |  ||||||||  ||||||||||||||||||| ||||||||||||||||    
T  17560958 gagacatacaattagtacttattgcctcgtgattttgacgaggtgccaaccatagaaccaacttttggtgtgttgggggactgtctttgtttttcttatt 17560859  T
Q  113 cttacaagaaaactgattttgttttatggcagatgaagaaattcggggttgaagagtcttggactccatttcttaaagttagttaccagaatcttcaaat 212  Q
     ||||||| |||  ||||| ||| ||||||| ||||||||||| ||||||||||| |||||||| ||||| |||| | |||||||  |  ||||||||||    
T  17560858 gttacaaggaaatcgatttggttatatggcacatgaagaaatttggggttgaagattcttggacaccattccttataattagttataacgatcttcaaat 17560759  T
Q  213 agatta 218  Q
     |||||    
T  17560758 tgatta 17560753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 77 - 210
Target Start/End: Complemental strand, 39379182 - 39379049
Alignment:
Q  77 ttggtgtgttgggggactgcctttgtttttcttattcttacaagaaaactgattttgttttatggcagatgaagaaattcggggttgaagagtcttggac 176  Q
    ||||||||||||| ||||| |||||||||||||||| |||||  |||||||||||| || |||||||||||||| |||| ||||||||||||||||||||    
T  39379182 ttggtgtgttgggtgactgtctttgtttttcttattgttacagaaaaactgattttattatatggcagatgaaggaatttggggttgaagagtcttggac 39379083  T
Q  177 tccatttcttaaagttagttaccagaatcttcaa 210  Q
    || |||||||||| | ||||| ||  ||||||||    
T  39379082 tcaatttcttaaaatcagttatcatgatcttcaa 39379049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 80 - 197
Target Start/End: Original strand, 4570879 - 4570996
Alignment:
Q  80 gtgtgttgggggactgcctttgtttttcttattcttacaagaaaactgattttgttttatggcagatgaagaaattcggggttgaagagtcttggactcc 179  Q
    |||||||||| | |||||||||||||||||||||  ||| | |||||||||||||| ||||||| ||||||||||| ||||||||||| ||||||||||     
T  4570879 gtgtgttgggaggctgcctttgtttttcttattcacacagggaaactgattttgttatatggcaaatgaagaaatttggggttgaagattcttggactca 4570978  T
Q  180 atttcttaaagttagtta 197  Q
    ||| |||||| |||||||    
T  4570979 attgcttaaaattagtta 4570996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 77 - 214
Target Start/End: Original strand, 10218934 - 10219071
Alignment:
Q  77 ttggtgtgttgggggactgcctttgtttttcttattcttacaagaaaactgattttgttttatggcagatgaagaaattcggggttgaagagtcttggac 176  Q
    |||||||||||||||  |||||||||||||||| ||   ||||| |||||||||||||| ||||||| ||||||||||| ||| ||||||| ||||||||    
T  10218934 ttggtgtgttggggggttgcctttgtttttcttttttgcacaaggaaactgattttgttgtatggcaaatgaagaaatttgggattgaagattcttggac 10219033  T
Q  177 tccatttcttaaagttagttaccagaatcttcaaatag 214  Q
    || ||| |||||| |||||||||| | ||||| |||||    
T  10219034 tcaattacttaaaattagttaccatactcttcgaatag 10219071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 126 - 236
Target Start/End: Complemental strand, 4015037 - 4014924
Alignment:
Q  126 tgattttgttttatggcagatgaagaaattcggggttgaagagtcttggactccatttcttaaagttagttaccagaatcttcaaatagatta---caac 222  Q
    |||| ||||| ||||||||||||||||||| ||||||||||| |||||||||| ||| |||||||||||||||||  |||||| |||||||||   ||||    
T  4015037 tgatattgttatatggcagatgaagaaatttggggttgaagattcttggactcaattccttaaagttagttaccatgatcttctaatagattatggcaac 4014938  T
Q  223 tttagtgacgatga 236  Q
    ||||||||| ||||    
T  4014937 tttagtgacaatga 4014924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 215
Target Start/End: Complemental strand, 4016957 - 4016755
Alignment:
Q  13 gagacatacaatcaatacttgctgcctcgtggttttgaagaagtgccacctactgaaccaacagttggtgtgttgggggactgcctttgtttttcttatt 112  Q
    |||||||||||||||||| || ||||||||||||||||  ||| ||| | |      |||||  || |||||||||||| ||||||||||||||||||||    
T  4016957 gagacatacaatcaatacatggtgcctcgtggttttgataaagggccgctttacatgccaactattagtgtgttggggggctgcctttgtttttcttatt 4016858  T
Q  113 cttacaagaaaactgattttgttttatggcagatgaagaaattcggggttgaagagtcttggactccatttcttaaagttagttaccagaatcttcaaat 212  Q
    | || | | ||||  ||||   | | ||||||||||||||||| || |||||||| || |||||||  ||  ||||| ||||||||||  |||||| |||    
T  4016857 cctataggcaaaccaatttctgtatctggcagatgaagaaatttggagttgaagattcctggactcagttgtttaaatttagttaccatgatcttctaat 4016758  T
Q  213 aga 215  Q
    |||    
T  4016757 aga 4016755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 149
Target Start/End: Complemental strand, 17953766 - 17953710
Alignment:
Q  93 ctgcctttgtttttcttattcttacaagaaaactgattttgttttatggcagatgaa 149  Q
    ||||||||||||||| |||  || ||  |||||||| ||||||||||||||||||||    
T  17953766 ctgcctttgtttttcgtatgatttcagaaaaactgaatttgttttatggcagatgaa 17953710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 104; Significance: 6e-52; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 13 - 228
Target Start/End: Original strand, 3625619 - 3625834
Alignment:
Q  13 gagacatacaatcaatacttgctgcctcgtggttttgaagaagtgccacctactgaaccaacagttggtgtgttgggggactgcctttgtttttcttatt 112  Q
    |||||||||||||| || | |||||||||||| |||||  | ||||| ||||  |||||||  |||||||||||||||||||||||||||||||||||||    
T  3625619 gagacatacaatcactattggctgcctcgtggatttgataaggtgcctcctatagaaccaaatgttggtgtgttgggggactgcctttgtttttcttatt 3625718  T
Q  113 cttacaagaaaactgattttgttttatggcagatgaagaaattcggggttgaagagtcttggactccatttcttaaagttagttaccagaatcttcaaat 212  Q
    ||||||||  |||  || || || ||||||| ||||||||||| |||||||||||||||||||||| |||||||||| ||||||| || ||||||||| |    
T  3625719 cttacaaggtaacctatcttattatatggcaaatgaagaaatttggggttgaagagtcttggactcaatttcttaaaattagttatcaaaatcttcaatt 3625818  T
Q  213 agattacaactttagt 228  Q
    ||||||  ||||||||    
T  3625819 agattatgactttagt 3625834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 90; Significance: 1e-43; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 7 - 228
Target Start/End: Complemental strand, 3561149 - 3560928
Alignment:
Q  7 ggaacagagacatacaatcaatacttgctgcctcgtggttttgaagaagtgccacctactgaaccaacagttggtgtgttgggggactgcctttgttttt 106  Q
    ||||| ||||||||||||||||| ||| ||||||| ||||||||  | || || ||| | || || |   ||||||| |||||||| |||||||||||||    
T  3561149 ggaactgagacatacaatcaatatttgttgcctcggggttttgataaggtaccgcctgcagagcctaatcttggtgtcttgggggattgcctttgttttt 3561050  T
Q  107 cttattcttacaagaaaactgattttgttttatggcagatgaagaaattcggggttgaagagtcttggactccatttcttaaagttagttaccagaatct 206  Q
    |||||||||||||| |||| |||||| || | ||||||||||| ||||| |||||||||||||||||||||| |||||||||| ||||||| ||  ||||    
T  3561049 cttattcttacaaggaaaccgattttattatttggcagatgaaaaaatttggggttgaagagtcttggactcaatttcttaaaattagttatcatgatct 3560950  T
Q  207 tcaaatagattacaactttagt 228  Q
    |||| |||||||  ||||||||    
T  3560949 tcaattagattatgactttagt 3560928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 70 - 197
Target Start/End: Original strand, 3565686 - 3565813
Alignment:
Q  70 ccaacagttggtgtgttgggggactgcctttgtttttcttattcttacaagaaaactgattttgttttatggcagatgaagaaattcggggttgaagagt 169  Q
    ||||| |||||||||||| |||||||||||||||||||||||| ||| |||||||| |||||| || |||||||||||||| |||| |||||||||||||    
T  3565686 ccaactgttggtgtgttgagggactgcctttgtttttcttattgttataagaaaaccgattttattatatggcagatgaaggaatttggggttgaagagt 3565785  T
Q  170 cttggactccatttcttaaagttagtta 197  Q
    ||||||||| |||||||||| |||||||    
T  3565786 cttggactcaatttcttaaaattagtta 3565813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 70 - 197
Target Start/End: Original strand, 3557668 - 3557795
Alignment:
Q  70 ccaacagttggtgtgttgggggactgcctttgtttttcttattcttacaagaaaactgattttgttttatggcagatgaagaaattcggggttgaagagt 169  Q
    ||||| |||||||||||| ||||||| |||||||||||||||||||||||| |||| |||||| || ||||||| |||||| |||| |||||||||||||    
T  3557668 ccaaccgttggtgtgttgagggactgtctttgtttttcttattcttacaaggaaaccgattttattatatggcatatgaaggaatttggggttgaagagt 3557767  T
Q  170 cttggactccatttcttaaagttagtta 197  Q
    ||||||||| |||||||||| |||||||    
T  3557768 cttggactcaatttcttaaaattagtta 3557795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 13 - 189
Target Start/End: Complemental strand, 1686470 - 1686294
Alignment:
Q  13 gagacatacaatcaatacttgctgcctcgtggttttgaagaagtgccacctactgaaccaacagttggtgtgttgggggactgcctttgtttttcttatt 112  Q
    |||||||||||||||||   | ||||||  |||||||  || ||||| | ||  || ||||| |||||||||||||||||||||||||||||||||||||    
T  1686470 gagacatacaatcaatatcggttgcctcagggttttgctgaggtgccgcttatagagccaactgttggtgtgttgggggactgcctttgtttttcttatt 1686371  T
Q  113 cttacaagaaaactgattttgttttatggcagatgaagaaattcggggttgaagagtcttggactccatttcttaaa 189  Q
    |||| ||||  ||  || || || |||||||||||||| |||| || ||||| ||||||||||||| ||||||||||    
T  1686370 cttataagaggaccaatcttattatatggcagatgaaggaatttggcgttgacgagtcttggactcaatttcttaaa 1686294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 122 - 216
Target Start/End: Complemental strand, 11971058 - 11970964
Alignment:
Q  122 aaactgattttgttttatggcagatgaagaaattcggggttgaagagtcttggactccatttcttaaagttagttaccagaatcttcaaatagat 216  Q
    ||||| |||||||| ||||||| |||||| |||| || || |||||||||||||||| |||||||| | ||||||| || |||||||||||||||    
T  11971058 aaactcattttgttatatggcaaatgaaggaatttggagtggaagagtcttggactcaatttcttagaattagttatcataatcttcaaatagat 11970964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 122 - 207
Target Start/End: Original strand, 53774834 - 53774919
Alignment:
Q  122 aaactgattttgttttatggcagatgaagaaattcggggttgaagagtcttggactccatttcttaaagttagttaccagaatctt 207  Q
    ||||| |||||||| ||||||| |||||| |||| || ||||||||||||||||||| ||| |||||| ||||||| |||||||||    
T  53774834 aaactcattttgttatatggcaaatgaaggaatttggagttgaagagtcttggactcaattccttaaaattagttatcagaatctt 53774919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 122 - 217
Target Start/End: Complemental strand, 11981759 - 11981664
Alignment:
Q  122 aaactgattttgttttatggcagatgaagaaattcggggttgaagagtcttggactccatttcttaaagttagttaccagaatcttcaaatagatt 217  Q
    ||||| |||||||| ||||||| |||||| |||| || || |||||||| ||||||| |||||||||| ||||||| |  ||||||||||| ||||    
T  11981759 aaactcattttgttatatggcaaatgaaggaatttggagtggaagagtcctggactcgatttcttaaaattagttatcttaatcttcaaattgatt 11981664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 215
Target Start/End: Complemental strand, 53430169 - 53430082
Alignment:
Q  128 attttgttttatggcagatgaagaaattcggggttgaagagtcttggactccatttcttaaagttagttaccagaatcttcaaataga 215  Q
    |||||||  ||||||||||||||||||  ||||  ||||| |||||||||| ||| |||||| ||||||||||  |||||||| ||||    
T  53430169 attttgtcatatggcagatgaagaaatatggggccgaagattcttggactcaattccttaaaattagttaccaacatcttcaagtaga 53430082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 231
Target Start/End: Original strand, 53790543 - 53790656
Alignment:
Q  118 aagaaaactgattttgttttatggcagatgaagaaattcggggttgaagagtcttggactccatttcttaaagttagttaccagaatcttcaaatagatt 217  Q
    |||| |||| ||||| || ||||| ||||||  ||||| ||  ||||| | |||||||||| |||||||||| ||||||  |||||||||||| |||||     
T  53790543 aagagaactcattttattatatggaagatgacaaaatttggatttgaacaatcttggactcaatttcttaaaattagttttcagaatcttcaagtagata 53790642  T
Q  218 acaactttagtgac 231  Q
    | || |||||||||    
T  53790643 ataattttagtgac 53790656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 204
Target Start/End: Complemental strand, 8443562 - 8443448
Alignment:
Q  90 ggactgcctttgtttttcttattcttacaagaaaactgattttgttttatggcagatgaagaaattcggggttgaagagtcttggactccatttcttaaa 189  Q
    |||||| |||||||||||||||  || ||||| |||| ||| |||| | |||||||||||| | || || ||| | |||||||||| || |||  |||||    
T  8443562 ggactgtctttgtttttcttatgatttcaagagaactcattatgttatttggcagatgaaggattttggagttcacgagtcttggattcaattatttaaa 8443463  T
Q  190 gttagttaccagaat 204  Q
     ||||||| ||||||    
T  8443462 attagttatcagaat 8443448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 97 - 209
Target Start/End: Original strand, 19359106 - 19359218
Alignment:
Q  97 ctttgtttttcttattcttacaagaaaactgattttgttttatggcagatgaagaaattcggggttgaagagtcttggactccatttcttaaagttagtt 196  Q
    ||||| |||||| ||| ||| |||||||||||||||| | |||   ||||| |  |||| || ||||||||||||||||||| | || ||||| |||| |    
T  19359106 ctttgcttttctaattattataagaaaactgattttgatatatttaagatggaagaatttggagttgaagagtcttggactcaacttattaaaattaggt 19359205  T
Q  197 accagaatcttca 209  Q
    | || ||||||||    
T  19359206 atcaaaatcttca 19359218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 88; Significance: 2e-42; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 8 - 218
Target Start/End: Original strand, 29874390 - 29874601
Alignment:
Q  8 gaacagagacatacaatcaatacttgctgcctcgtggttttgaagaagtgccacctactgaaccaacagttggtgtgttgggg-gactgcctttgttttt 106  Q
    |||| |||||||||||||  |||||  ||||||||| |||||| || ||||||||| |  ||||||   | |||||||||||| ||||| ||||||||||    
T  29874390 gaactgagacatacaatcggtacttcttgcctcgtgattttgatgaggtgccacctgcacaaccaaatataggtgtgttggggcgactgtctttgttttt 29874489  T
Q  107 cttattcttacaagaaaactgattttgttttatggcagatgaagaaattcggggttgaagagtcttggactccatttcttaaagttagttaccagaatct 206  Q
    |||||| ||||||| ||||||||||  || ||||||| ||||||||||| ||||||||||| |||||||||||||| |||||| ||||||| || |||||    
T  29874490 cttattgttacaaggaaactgatttcattatatggcaaatgaagaaatttggggttgaagattcttggactccattacttaaaattagttatcaaaatct 29874589  T
Q  207 tcaaatagatta 218  Q
    |||||| |||||    
T  29874590 tcaaattgatta 29874601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 47 - 218
Target Start/End: Complemental strand, 29922144 - 29921973
Alignment:
Q  47 ttgaagaagtgccacctactgaaccaacagttggtgtgttgggggactgcctttgtttttcttattcttacaagaaaactgattttgttttatggcagat 146  Q
    |||| ||||||||| || | |||||||| |||||||||||||||| ||||||||||||||||||| |||||||  |||||||||||||| ||||||||||    
T  29922144 ttgatgaagtgccatctgcagaaccaaccgttggtgtgttggggggctgcctttgtttttcttatgcttacaaagaaactgattttgttatatggcagat 29922045  T
Q  147 gaagaaattcggggttgaagagtcttggactccatttcttaaagttagttaccagaatcttcaaatagatta 218  Q
    ||||||||| |||| |||||| |||||| ||| ||| |||| | ||||||| || ||||||| |||||||||    
T  29922044 gaagaaatttggggatgaagattcttggtctcaattccttagaattagttatcaaaatcttctaatagatta 29921973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 76 - 218
Target Start/End: Original strand, 29867187 - 29867326
Alignment:
Q  76 gttggtgtgttgggggactgcctttgtttttcttattcttacaagaaaactgattttgttttatggcagatgaagaaattcggggttgaagagtcttgga 175  Q
    |||||||||||||||||||||||||||||||||||||||   ||| ||||||||||| || ||||||| ||||||||||||||||||||||| |||||||    
T  29867187 gttggtgtgttgggggactgcctttgtttttcttattct---aaggaaactgattttattatatggcaaatgaagaaattcggggttgaagattcttgga 29867283  T
Q  176 ctccatttcttaaagttagttaccagaatcttcaaatagatta 218  Q
    ||| ||| |||| | |||||||||| ||||||||||| |||||    
T  29867284 ctcaattccttagaattagttaccataatcttcaaattgatta 29867326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 16 - 230
Target Start/End: Original strand, 29859342 - 29859556
Alignment:
Q  16 acatacaatcaatacttgctgcctcgtggttttgaagaagtgccacctactga-accaacagttggtgtgttgggggactgcctttgtttttcttattct 114  Q
    |||||||||||||||||  |||||||||| ||||| || ||||| |||  ||| ||||||  |||||||||||||||||   |||||||||||||||| |    
T  29859342 acatacaatcaatacttattgcctcgtgggtttgatgaggtgccgcctg-tgataccaactattggtgtgttgggggaccatctttgtttttcttattgt 29859440  T
Q  115 tacaagaaaactgattttgttttatggcagatgaagaaattcggggttgaagagtcttggactccatttcttaaagttagttaccagaatcttcaaatag 214  Q
    |||||| ||| |||||| ||| ||||| ||||||||||||| || |||||||| |||||||| |||||||||||| ||||||| || ||||||||| |      
T  29859441 tacaaggaaattgatttcgttatatgggagatgaagaaatttggagttgaagattcttggaccccatttcttaaaattagttatcacaatcttcaagtta 29859540  T
Q  215 attacaactttagtga 230  Q
    ||||||||| ||||||    
T  29859541 attacaactatagtga 29859556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 13 - 218
Target Start/End: Original strand, 29881141 - 29881346
Alignment:
Q  13 gagacatacaatcaatacttgctgcctcgtggttttgaagaagtgccacctactgaaccaacagttggtgtgttgggggactgcctttgtttttcttatt 112  Q
    |||||||||||||||||    |||||||   ||||||| || ||||||||| |   |||||  ||||||||||||| |||||||||||| |||| |||||    
T  29881141 gagacatacaatcaatatcgactgcctccgagttttgatgaggtgccacctgcacgaccaattgttggtgtgttggaggactgcctttgcttttgttatt 29881240  T
Q  113 cttacaagaaaactgattttgttttatggcagatgaagaaattcggggttgaagagtcttggactccatttcttaaagttagttaccagaatcttcaaat 212  Q
     ||||||| ||||||||||| || | ||||| ||||||||||| ||||||||||| |||||||||| ||| |||| | |||||||||| | |||||||||    
T  29881241 gttacaaggaaactgattttattgtttggcaaatgaagaaatttggggttgaagattcttggactcaattccttagaattagttaccatagtcttcaaat 29881340  T
Q  213 agatta 218  Q
     |||||    
T  29881341 tgatta 29881346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 13 - 200
Target Start/End: Original strand, 29106693 - 29106886
Alignment:
Q  13 gagacatacaatcaatacttgctgcctcgtggttttgaagaagtgccacctactgaaccaacagttggtgtgttgggggactgcctttgtttttcttatt 112  Q
    ||||||||||||||||||  | |||||||||| ||||| ||||||||  | |     |||||||||||||||||||||| ||||||||||||||||||||    
T  29106693 gagacatacaatcaatacaagttgcctcgtgggtttgatgaagtgccgtcaaaacggccaacagttggtgtgttggggggctgcctttgtttttcttatt 29106792  T
Q  113 cttacaagaaaac------tgattttgttttatggcagatgaagaaattcggggttgaagagtcttggactccatttcttaaagttagttacca 200  Q
      |||   |||||      |||||||||| ||||||||||||||||||| |||||||||||||||||||||| | || ||||| ||||||||||    
T  29106793 tatacgtaaaaacagattttgattttgttgtatggcagatgaagaaatttggggttgaagagtcttggactcaactttttaaaattagttacca 29106886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 7 - 210
Target Start/End: Original strand, 29895345 - 29895550
Alignment:
Q  7 ggaacagagacatacaatcaatacttgctgcctcgtggttttgaagaagtgccacctactgaaccaacagttggtgtgttgggggactgcctttgttttt 106  Q
    ||||| ||||| |||||||||||| |||||||||  |||||||| || ||||| |||||  ||||||| ||| |||| ||||| | ||| ||||||||||    
T  29895345 ggaacggagacttacaatcaatacctgctgcctctgggttttgatgaggtgccccctacacaaccaacggttagtgtcttgggtggctgtctttgttttt 29895444  T
Q  107 cttattctt---acaagaaaactgattttgttttatggcagatgaagaaattcggggttgaagagtcttggactccatttcttaaagttagttaccagaa 203  Q
    |||||||||   ||||| |||  || |||||||||||||||||||||||||| ||| | ||||||||||||| || ||| |||| | |||||| ||| ||    
T  29895445 cttattcttctgacaaggaaaacgaatttgttttatggcagatgaagaaatttgggatagaagagtcttggagtcaattacttaga-ttagtttccaaaa 29895543  T
Q  204 tcttcaa 210  Q
    |||||||    
T  29895544 tcttcaa 29895550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 35 - 215
Target Start/End: Complemental strand, 29454266 - 29454086
Alignment:
Q  35 tgcctcgtggttttgaagaagtgccacctactgaaccaacagttggtgtgttgggggactgcctttgtttttcttattcttacaagaaaactgattttgt 134  Q
    ||||||||| |||||| || |||||||||   |  ||||| |||||||| |||||||   |||||||||||||||||||||||||| || | ||||||||    
T  29454266 tgcctcgtgattttgatgaggtgccacctgaagctccaacggttggtgttttggggggaagcctttgtttttcttattcttacaaggaacccgattttgt 29454167  T
Q  135 tttatggcagatgaagaaattcggggttgaagagtcttggactccatttcttaaagttagttaccagaatcttcaaataga 215  Q
    | |||||| ||||| |||||| || |||||||| |||||||||| |||  ||||| ||||||| ||  |||||||||||||    
T  29454166 tatatggcggatgatgaaatttggagttgaagattcttggactcaattctttaaaattagttatcaagatcttcaaataga 29454086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 6 - 213
Target Start/End: Complemental strand, 29476532 - 29476325
Alignment:
Q  6 aggaacagagacatacaatcaatacttgctgcctcgtggttttgaagaagtgccacctactgaaccaacagttggtgtgttgggggactgcctttgtttt 105  Q
    |||||| ||||||||||||||||||   |||||||||| |||||| ||| ||||| || |    ||||  |||| ||||||||||| || |||||||| |    
T  29476532 aggaactgagacatacaatcaataccgtctgcctcgtgattttgatgaaatgccatctgccctgccaattgttgctgtgttggggggcttcctttgttgt 29476433  T
Q  106 tcttattcttacaagaaaactgattttgttttatggcagatgaagaaattcggggttgaagagtcttggactccatttcttaaagttagttaccagaatc 205  Q
    || |||| ||||||| |||| |||||| || |||||||||||||| |||| |||  |||  | |||||||||| |||||||||| | ||||| || ||||    
T  29476432 tcctatttttacaaggaaaccgattttcttatatggcagatgaaggaattagggaatgacaactcttggactcaatttcttaaaataagttatcaaaatc 29476333  T
Q  206 ttcaaata 213  Q
    ||||||||    
T  29476332 ttcaaata 29476325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 205
Target Start/End: Original strand, 29899253 - 29899451
Alignment:
Q  13 gagacatacaatcaatacttgctgcctcgtggttttgaagaagtgccacctactgaaccaacagttggtgtgttgggggactgcctttgtttttcttatt 112  Q
    |||||||| || || ||| || |||||| ||| ||||| ||||||||  ||   || |||||| ||||||||||||||| ||||||||||||||||| ||    
T  29899253 gagacatagaagcagtacatgttgcctcctgggtttgatgaagtgccgtctgtggagccaacatttggtgtgttggggggctgcctttgtttttcttgtt 29899352  T
Q  113 cttacaagaaaac------tgattttgttttatggcagatgaagaaattcggggttgaagagtcttggactccatttcttaaagttagttaccagaatc 205  Q
     |||||| || ||      |||||||||| ||||||||||||||||||| |||||||||||||| ||||||| |||| | ||| |||||| ||| ||||    
T  29899353 tttacaataataccaattttgattttgttatatggcagatgaagaaatttggggttgaagagtcctggactcaatttttaaaaattagttgccaaaatc 29899451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 80 - 185
Target Start/End: Complemental strand, 29445774 - 29445669
Alignment:
Q  80 gtgtgttgggggactgcctttgtttttcttattcttacaagaaaactgattttgttttatggcagatgaagaaattcggggttgaagagtcttggactcc 179  Q
    |||||||||||| || |||||||| |||||||| ||||||| |||| |||||| || |||||||||||||| |||| ||||||||||| ||||||||||     
T  29445774 gtgtgttggggggcttcctttgttgttcttatttttacaaggaaaccgattttcttatatggcagatgaaggaattaggggttgaagactcttggactca 29445675  T
Q  180 atttct 185  Q
    ||||||    
T  29445674 atttct 29445669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 151
Target Start/End: Original strand, 29885133 - 29885271
Alignment:
Q  13 gagacatacaatcaatacttgctgcctcgtggttttgaagaagtgccacctactgaaccaacagttggtgtgttgggggactgcctttgtttttcttatt 112  Q
    |||||||| || || ||| || |||||| ||| ||||| ||||||||  ||   || |||||| |||||||| | |||| ||||||||||||||||||||    
T  29885133 gagacatagaagcagtacatgttgcctcctgggtttgatgaagtgccgtctgtggagccaacatttggtgtgctagggggctgcctttgtttttcttatt 29885232  T
Q  113 cttacaagaaaactgattttgttttatggcagatgaaga 151  Q
     || |||| |||||||||||||| |||||||||||||||    
T  29885233 tttccaaggaaactgattttgttatatggcagatgaaga 29885271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 129 - 226
Target Start/End: Complemental strand, 660916 - 660819
Alignment:
Q  129 ttttgttttatggcagatgaagaaattcggggttgaagagtcttggactccatttcttaaagttagttaccagaatcttcaaatagattacaacttta 226  Q
    ||||||| |||||||||||||| ||||  | ||||||||||||||||||| ||| |||||| ||||||| || ||||||||||||||| | |||||||    
T  660916 ttttgttatatggcagatgaaggaatttcgagttgaagagtcttggactcaattccttaaaattagttatcataatcttcaaatagataataacttta 660819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 10 - 158
Target Start/End: Complemental strand, 29920231 - 29920083
Alignment:
Q  10 acagagacatacaatcaatacttgctgcctcgtggttttgaagaagtgccacctactgaaccaacagttggtgtgttgggggactgcctttgtttttctt 109  Q
    |||||||| ||| |||| || || ||||| ||||| ||||| |||||||||| |   ||||||||  ||||||||||||| | |||||||| || |||||    
T  29920231 acagagacctaccatcagtatttactgccccgtggatttgatgaagtgccacttgtagaaccaactcttggtgtgttgggaggctgccttttttcttctt 29920132  T
Q  110 attcttacaagaaaactgattttgttttatggcagatgaagaaattcgg 158  Q
    ||||||||||| |||| || ||| |  ||||| ||||||||||||||||    
T  29920131 attcttacaaggaaaccgaatttataatatggaagatgaagaaattcgg 29920083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 128 - 215
Target Start/End: Original strand, 14076678 - 14076765
Alignment:
Q  128 attttgttttatggcagatgaagaaattcggggttgaagagtcttggactccatttcttaaagttagttaccagaatcttcaaataga 215  Q
    |||| ||| ||||||| |||||| |||| || |||||||| |||||||||| |||||||||| ||||||| |||||||||||||||||    
T  14076678 atttcgttatatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaattagttatcagaatcttcaaataga 14076765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 128 - 215
Target Start/End: Original strand, 14386706 - 14386793
Alignment:
Q  128 attttgttttatggcagatgaagaaattcggggttgaagagtcttggactccatttcttaaagttagttaccagaatcttcaaataga 215  Q
    |||| ||| ||||||| |||||| |||| || |||||||| |||||||||| |||||||||| ||||||| |||||||||||||||||    
T  14386706 atttcgttatatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaattagttatcagaatcttcaaataga 14386793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 117 - 209
Target Start/End: Original strand, 24010372 - 24010464
Alignment:
Q  117 caagaaaactgattttgttttatggcagatgaagaaattcggggttgaagagtcttggactccatttcttaaagttagttaccagaatcttca 209  Q
    ||||| |||||| |||||||||||||| |||||| | | ||||||| ||||||||||||||| ||| |||||  ||||||| |||||||||||    
T  24010372 caagagaactgaatttgttttatggcatatgaaggagtacggggttcaagagtcttggactcaattacttaagattagttatcagaatcttca 24010464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 85 - 218
Target Start/End: Complemental strand, 29431111 - 29430981
Alignment:
Q  85 ttgggggactgcctttgtttttcttattcttacaagaaaactgattttgttttatggcagatgaagaaattcggggttgaagagtcttggactccatttc 184  Q
    |||||||  |||||||||||||||||||||   ||| | ||  |||||||| |||||| ||||| |||||| |||| | |||| |||||||| | ||| |    
T  29431111 ttggggggatgcctttgtttttcttattct---aaggacacctattttgttatatggcggatgatgaaatttggggctaaagattcttggacccaattcc 29431015  T
Q  185 ttaaagttagttaccagaatcttcaaatagatta 218  Q
    ||||| ||||||| ||| ||||||||||||||||    
T  29431014 ttaaaattagttatcaggatcttcaaatagatta 29430981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 90 - 208
Target Start/End: Complemental strand, 19344683 - 19344565
Alignment:
Q  90 ggactgcctttgtttttcttattcttacaagaaaactgattttgttttatggcagatgaagaaattcggggttgaagagtcttggactccatttcttaaa 189  Q
    ||||||||||||||||||| |   |  |||||| ||| |||||||| |||||||||||| | |||| || |||||| | |||||||||| ||||||||||    
T  19344683 ggactgcctttgtttttctcacaatctcaagaacactcattttgttatatggcagatgatggaatttggagttgaacaatcttggactcaatttcttaaa 19344584  T
Q  190 gttagttaccagaatcttc 208  Q
     ||||||  ||||||||||    
T  19344583 attagttttcagaatcttc 19344565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 122 - 207
Target Start/End: Original strand, 23993529 - 23993614
Alignment:
Q  122 aaactgattttgttttatggcagatgaagaaattcggggttgaagagtcttggactccatttcttaaagttagttaccagaatctt 207  Q
    ||||||| |||||||||||||| |||||| | | ||||||| ||||||||||||||| |||  ||||  |||||||||||||||||    
T  23993529 aaactgaatttgttttatggcatatgaaggagtacggggttcaagagtcttggactcaattatttaagattagttaccagaatctt 23993614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 117 - 209
Target Start/End: Original strand, 24002188 - 24002280
Alignment:
Q  117 caagaaaactgattttgttttatggcagatgaagaaattcggggttgaagagtcttggactccatttcttaaagttagttaccagaatcttca 209  Q
    ||||| |||||| |||||||||||||| |||||| | | ||| ||| ||||||||||||||| ||| |||||  ||||||| |||||||||||    
T  24002188 caagagaactgaatttgttttatggcatatgaaggagtacggagttcaagagtcttggactcaattacttaagattagttatcagaatcttca 24002280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 212
Target Start/End: Original strand, 24035740 - 24035835
Alignment:
Q  117 caagaaaactgattttgttttatggcagatgaagaaattcggggttgaagagtcttggactccatttcttaaagttagttaccagaatcttcaaat 212  Q
    |||||||||||| || ||||||||||| |||||| | | ||| ||| ||||||||||||||| |||  ||||  |||||||| |||||||||||||    
T  24035740 caagaaaactgaattggttttatggcaaatgaaggagtacggcgttcaagagtcttggactcaattatttaagattagttacaagaatcttcaaat 24035835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 128 - 218
Target Start/End: Complemental strand, 19351139 - 19351049
Alignment:
Q  128 attttgttttatggcagatgaagaaattcggggttgaagagtcttggactccatttcttaaagttagttaccagaatcttcaaatagatta 218  Q
    ||||||||||||||||||||| | |||| || ||||| ||||||||||||||||| || ||| ||||||  ||| ||||||| || |||||    
T  19351139 attttgttttatggcagatgatggaatttggagttgaggagtcttggactccattcctcaaaattagttttcaggatcttcacattgatta 19351049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 208
Target Start/End: Original strand, 46769382 - 46769451
Alignment:
Q  139 tggcagatgaagaaattcggggttgaagagtcttggactccatttcttaaagttagttaccagaatcttc 208  Q
    ||||||||||| | |||||| ||||||||| ||||||||| | |||||||| |||||||||| |||||||    
T  46769382 tggcagatgaaaatattcggagttgaagagccttggactcaacttcttaaaattagttaccaaaatcttc 46769451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 208
Target Start/End: Original strand, 15443933 - 15444044
Alignment:
Q  97 ctttgtttttcttattcttacaagaaaactgattttgttttatggcagatgaagaaattcggggttgaagagtcttggactccatttcttaaagttagtt 196  Q
    |||||||||||||||  || ||| | |||||  |||||||||||||| |||||| | |  || ||||||||||||||||||| |||  ||||  | ||||    
T  15443933 ctttgtttttcttatgattccaatacaactggatttgttttatggcatatgaaggagtatggagttgaagagtcttggactcaattatttaagatgagtt 15444032  T
Q  197 accagaatcttc 208  Q
    ||||||||||||    
T  15444033 accagaatcttc 15444044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 208
Target Start/End: Original strand, 36260222 - 36260333
Alignment:
Q  97 ctttgtttttcttattcttacaagaaaactgattttgttttatggcagatgaagaaattcggggttgaagagtcttggactccatttcttaaagttagtt 196  Q
    ||||| |||||| ||  |||||||||||||||||||||| ||||| ||||| |  |||| || |||||||||||||||| || | || ||||| |||| |    
T  36260222 ctttgcttttctaatgattacaagaaaactgattttgttatatggaagatggaagaatttggagttgaagagtcttggattcaacttattaaaattagct 36260321  T
Q  197 accagaatcttc 208  Q
    | || |||||||    
T  36260322 atcaaaatcttc 36260333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 175
Target Start/End: Original strand, 9807814 - 9807871
Alignment:
Q  118 aagaaaactgattttgttttatggcagatgaagaaattcggggttgaagagtcttgga 175  Q
    |||||||| ||||| ||| |||||||||||||| |||| || ||||||||||||||||    
T  9807814 aagaaaaccgatttcgttatatggcagatgaaggaatttggagttgaagagtcttgga 9807871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 97 - 178
Target Start/End: Original strand, 22100462 - 22100543
Alignment:
Q  97 ctttgtttttcttattcttacaagaaaactgattttgttttatggcagatgaagaaattcggggttgaagagtcttggactc 178  Q
    |||||||||||| ||  || ||| |||||| ||||| || ||||||| ||||||||||| || ||| |||||||||||||||    
T  22100462 ctttgtttttctcatgatttcaaaaaaactcattttattatatggcaaatgaagaaatttggagttcaagagtcttggactc 22100543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 213
Target Start/End: Original strand, 24385210 - 24385286
Alignment:
Q  137 tatggcagatgaagaaattcggggttgaagagtcttggactccatttcttaaagttagttaccagaatcttcaaata 213  Q
    ||||| |||||||||| || || |||||| ||||||||| || |||||||||| ||||| | || ||||||||||||    
T  24385210 tatggaagatgaagaactttggagttgaaaagtcttggagtcgatttcttaaaattagtcatcataatcttcaaata 24385286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 178
Target Start/End: Original strand, 26256741 - 26256825
Alignment:
Q  94 tgcctttgtttttcttattcttacaagaaaactgattttgttttatggcagatgaagaaattcggggttgaagagtcttggactc 178  Q
    ||||||||||||||| ||  |  |||| ||| ||||||||||||||||||||||||| | |  || ||| |||||||||||||||    
T  26256741 tgcctttgtttttctcatgataccaaggaaaatgattttgttttatggcagatgaaggagtatggagttcaagagtcttggactc 26256825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 178
Target Start/End: Original strand, 36263043 - 36263103
Alignment:
Q  118 aagaaaactgattttgttttatggcagatgaagaaattcggggttgaagagtcttggactc 178  Q
    |||||||||||||||||| ||||| ||||| |  |||| || |||||||||||||||||||    
T  36263043 aagaaaactgattttgttatatggaagatggaagaatttggagttgaagagtcttggactc 36263103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 22080837 - 22080956
Alignment:
Q  97 ctttgtttttcttattcttacaagaaaactgattttgttttatggcagatgaagaaattcggggttgaagagtcttggactccatttcttaaagttagtt 196  Q
    |||||||||||| ||  || |||  ||||| ||||| || ||||||| |||||| |||| || ||| |||||||||||||||  ||  | ||| ||||||    
T  22080837 ctttgtttttctcatgatttcaaacaaactcattttattatatggcaaatgaagcaatttggagttcaagagtcttggactcggttattcaaaattagtt 22080936  T
Q  197 accagaatcttcaaatagat 216  Q
    | |||||||| |||||||||    
T  22080937 atcagaatctccaaatagat 22080956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 128 - 219
Target Start/End: Complemental strand, 22520334 - 22520243
Alignment:
Q  128 attttgttttatggcagatgaagaaattcggggttgaagagtcttggactccatttcttaaagttagttaccagaatcttcaaatagattac 219  Q
    |||||||||||||||| |||| | | ||  | |||| |||||||||||||||| | ||| || |||||||  ||||||||||||| ||||||    
T  22520334 attttgttttatggcatatgatggattttagagttgtagagtcttggactccactgcttcaaattagttatgagaatcttcaaattgattac 22520243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 199
Target Start/End: Complemental strand, 19604524 - 19604462
Alignment:
Q  137 tatggcagatgaagaaattcggggttgaagagtcttggactccatttcttaaagttagttacc 199  Q
    |||||||||||||| |||| || |||||||| || ||||||| ||| |||||| |||||||||    
T  19604524 tatggcagatgaaggaatttggagttgaagactcctggactcaattccttaaaattagttacc 19604462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 210
Target Start/End: Original strand, 24016760 - 24016870
Alignment:
Q  100 tgtttttcttattcttacaagaaaactgattttgttttatggcagatgaagaaattcggggttgaagagtcttggactccatttcttaaagttagttacc 199  Q
    ||||||||| ||  || |||||||| ||| ||||||||||||||||||||| | |  ||| || ||||||||||||||  |||  ||||  | |||||||    
T  24016760 tgtttttctcatgatttcaagaaaagtgaatttgttttatggcagatgaaggagtatgggtttcaagagtcttggactaaattatttaagatcagttacc 24016859  T
Q  200 agaatcttcaa 210  Q
    ||| |||||||    
T  24016860 agagtcttcaa 24016870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 145 - 214
Target Start/End: Complemental strand, 6864860 - 6864791
Alignment:
Q  145 atgaagaaattcggggttgaagagtcttggactccatttcttaaagttagttaccagaatcttcaaatag 214  Q
    |||||| |||| || |||||||||||||||||||  || ||||||  |||||| || |||||||||||||    
T  6864860 atgaaggaatttggagttgaagagtcttggactcagttccttaaaactagttatcataatcttcaaatag 6864791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 128 - 221
Target Start/End: Complemental strand, 20058127 - 20058034
Alignment:
Q  128 attttgttttatggcagatgaagaaattcggggttgaagagtcttggactccatttcttaaagttagttaccagaatcttcaaatagattacaa 221  Q
    |||||||| ||||| | ||| || ||||| | |||||||||||||||  || |||||||||| |||||||  | |||||||||||  |||||||    
T  20058127 attttgttatatggaaaatggaggaattcagagttgaagagtcttggtgtcaatttcttaaaattagttatgaaaatcttcaaatcaattacaa 20058034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 129 - 210
Target Start/End: Original strand, 26217968 - 26218049
Alignment:
Q  129 ttttgttttatggcagatgaagaaattcggggttgaagagtcttggactccatttcttaaagttagttaccagaatcttcaa 210  Q
    |||||||||||||||||||||| | |  || ||| ||||||||||| ||| |||  ||||  |||||||||| |||||||||    
T  26217968 ttttgttttatggcagatgaaggagtatggagttcaagagtcttggtctcaattatttaagattagttaccataatcttcaa 26218049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 209
Target Start/End: Complemental strand, 12819997 - 12819905
Alignment:
Q  117 caagaaaactgattttgttttatggcagatgaagaaattcggggttgaagagtcttggactccatttcttaaagttagttaccagaatcttca 209  Q
    ||||| |||| |||||||| |||||||||||| | |||| || |||||| | || ||||||| ||| |||||| | ||||  |||||||||||    
T  12819997 caagagaacttattttgttgtatggcagatgacggaatttggagttgaacaatcctggactcaattccttaaaatcagttgtcagaatcttca 12819905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 87; Significance: 9e-42; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 13 - 231
Target Start/End: Complemental strand, 24331084 - 24330866
Alignment:
Q  13 gagacatacaatcaatacttgctgcctcgtggttttgaagaagtgccacctactgaaccaacagttggtgtgttgggggactgcctttgtttttcttatt 112  Q
    |||||||||||||||||| |  |||||| ||||||||| ||||| || || |  || |||||  ||||||| ||| ||| ||| ||||||||||| ||||    
T  24331084 gagacatacaatcaatacattatgcctcatggttttgatgaagttccgccgaaagagccaactattggtgtattgaggggctgtctttgtttttcatatt 24330985  T
Q  113 cttacaagaaaactgattttgttttatggcagatgaagaaattcggggttgaagagtcttggactccatttcttaaagttagttaccagaatcttcaaat 212  Q
    | |||||| |||| ||||||||| ||||| |||||||| |||| ||||||||||| |||||||||| | | ||||||||||||||||| ||||||| |||    
T  24330984 cgtacaaggaaaccgattttgttatatgggagatgaaggaatttggggttgaagattcttggactcaactccttaaagttagttaccataatcttctaat 24330885  T
Q  213 agattacaactttagtgac 231  Q
    ||||||  |||||||||||    
T  24330884 agattatgactttagtgac 24330866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 137 - 215
Target Start/End: Complemental strand, 18964891 - 18964813
Alignment:
Q  137 tatggcagatgaagaaattcggggttgaagagtcttggactccatttcttaaagttagttaccagaatcttcaaataga 215  Q
    ||||||| |||||| |||| || |||||||| |||||||||| |||||||||| || |||| |||||||||||||||||    
T  18964891 tatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaatttgttatcagaatcttcaaataga 18964813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 63 - 196
Target Start/End: Complemental strand, 29597687 - 29597554
Alignment:
Q  63 tactgaaccaacagttggtgtgttgggggactgcctttgtttttcttattcttacaagaaaactgattttgttttatggcagatgaagaaattcggggtt 162  Q
    ||||||||||||  ||| ||| |||  |||| |||||||||||||| |   || |||| ||||| |||||||| ||||||| ||||   |||| || |||    
T  29597687 tactgaaccaactattgctgttttgctggaccgcctttgtttttctcaccatttcaaggaaactcattttgttatatggcaaatgattgaatttggagtt 29597588  T
Q  163 gaagagtcttggactccatttcttaaagttagtt 196  Q
    ||| | |||||||||| ||| |||||| ||||||    
T  29597587 gaacaatcttggactcaattccttaaaattagtt 29597554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 4e-16; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 139 - 214
Target Start/End: Original strand, 17369675 - 17369750
Alignment:
Q  139 tggcagatgaagaaattcggggttgaagagtcttggactccatttcttaaagttagttaccagaatcttcaaatag 214  Q
    ||||| |||||| |||| || |||||||| |||||||||| |||||||||| ||||||| ||||||||||||||||    
T  17369675 tggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaattagttatcagaatcttcaaatag 17369750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 121 - 216
Target Start/End: Original strand, 20770643 - 20770738
Alignment:
Q  121 aaaactgattttgttttatggcagatgaagaaattcggggttgaagagtcttggactccatttcttaaagttagttaccagaatcttcaaatagat 216  Q
    |||||| |||||||| ||||||| |||||| |||| ||  |||||||||| |||| || ||| |||||| ||||||| || |||||||||||||||    
T  20770643 aaaacttattttgttatatggcaaatgaaggaatttggaattgaagagtcatggattcaattccttaaaattagttatcataatcttcaaatagat 20770738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 197
Target Start/End: Complemental strand, 6947997 - 6947881
Alignment:
Q  81 tgtgttgggggactgcctttgtttttcttattcttacaagaaaactgattttgttttatggcagatgaagaaattcggggttgaagagtcttggactcca 180  Q
    |||||||  ||| ||||||||||||||  ||  || |||||||||  | |||||| | ||||| |||||| |||| || |||||||| |||||||||| |    
T  6947997 tgtgttgatggattgcctttgtttttcacatgatttcaagaaaacccactttgttctttggcaaatgaaggaatttggagttgaagaatcttggactcaa 6947898  T
Q  181 tttcttaaagttagtta 197  Q
    || |||||| |||||||    
T  6947897 ttccttaaaattagtta 6947881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 147
Target Start/End: Complemental strand, 24254587 - 24254477
Alignment:
Q  37 cctcgtggttttgaagaagtgccacctactgaaccaacagttggtgtgttgggggactgcctttgtttttcttattcttacaagaaaactgattttgttt 136  Q
    ||||| ||| |||| |||||||||  || |||||| ||  ||| |||||||  ||||||||||||||||||| | | |  ||||| |||| ||||||||     
T  24254587 cctcggggtgttgatgaagtgccagatattgaaccgactattgctgtgttgatggactgcctttgtttttctcactatatcaagagaactcattttgtta 24254488  T
Q  137 tatggcagatg 147  Q
    |||||||||||    
T  24254487 tatggcagatg 24254477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0242 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0242
Description:

Target: scaffold0242; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 213
Target Start/End: Complemental strand, 13920 - 13715
Alignment:
Q  8 gaacagagacatacaatcaatacttgctgcctcgtggttttgaagaagtgccacctactgaaccaacagttggtgtgttgggggactgcctttgtttttc 107  Q
    |||| |||||||||||||| |||   |||||||||| |||| | ||| ||||| || ||   ||||  |||| ||| ||||||| || |||||||| |||    
T  13920 gaactgagacatacaatcagtaccgtctgcctcgtgattttcatgaaatgccatctgctctgccaattgttgctgtcttggggggcttcctttgttgttc 13821  T
Q  108 ttattcttacaagaaaactgattttgttttatggcagatgaagaaattcggggttgaagagtcttggactccatttcttaaagttagttaccagaatctt 207  Q
     |||| ||||||  |||| |||||| || |||||||||||||| |||| ||   ||| || ||||||||||  ||||||||| | || || || ||||||    
T  13820 ctatttttacaaagaaaccgattttcttatatggcagatgaaggaattaggaaatgatgaatcttggactcagtttcttaaaataaggtatcaaaatctt 13721  T
Q  208 caaata 213  Q
    ||||||    
T  13720 caaata 13715  T

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Target: scaffold0242; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 213
Target Start/End: Complemental strand, 22755 - 22550
Alignment:
Q  8 gaacagagacatacaatcaatacttgctgcctcgtggttttgaagaagtgccacctactgaaccaacagttggtgtgttgggggactgcctttgtttttc 107  Q
    |||| |||||||||||||| |||   |||||||||| |||| | ||| ||||| || ||   ||||  |||| ||| ||||||| || |||||||| |||    
T  22755 gaactgagacatacaatcagtaccgtctgcctcgtgattttcatgaaatgccatctgctctgccaattgttgctgtcttggggggcttcctttgttgttc 22656  T
Q  108 ttattcttacaagaaaactgattttgttttatggcagatgaagaaattcggggttgaagagtcttggactccatttcttaaagttagttaccagaatctt 207  Q
     |||| ||||||  |||| |||||| || |||||||||||||| |||| ||   ||| || ||||||||||  ||||||||| | || || || ||||||    
T  22655 ctatttttacaaagaaaccgattttcttatatggcagatgaaggaattaggaaatgatgaatcttggactcagtttcttaaaataaggtatcaaaatctt 22556  T
Q  208 caaata 213  Q
    ||||||    
T  22555 caaata 22550  T

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Target: chr2 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 89 - 218
Target Start/End: Original strand, 14514861 - 14514990
Alignment:
Q  89 gggactgcctttgtttttcttattcttacaagaaaactgattttgttttatggcagatgaagaaattcggggttgaagagtcttggactccatttcttaa 188  Q
    |||||||| | ||||||||||||  || |||||||||  || ||||| ||||| | ||| |  |||| || |||||||| |||||||||| ||| |||||    
T  14514861 gggactgcatgtgtttttcttatgatttcaagaaaacccatcttgttatatggaaaatggatgaatttggagttgaagattcttggactcaattccttaa 14514960  T
Q  189 agttagttaccagaatcttcaaatagatta 218  Q
    | |||||||   ||||||||||||||||||    
T  14514961 aattagttatatgaatcttcaaatagatta 14514990  T

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Target: chr8 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 122 - 210
Target Start/End: Original strand, 27618485 - 27618573
Alignment:
Q  122 aaactgattttgttttatggcagatgaagaaattcggggttgaagagtcttggactccatttcttaaagttagttaccagaatcttcaa 210  Q
    ||||| |||||||| ||||| | ||| |  || |||| |||||||||||||||||||  || |||||||||||||| ||||||||||||    
T  27618485 aaactcattttgttatatggaaaatggaagaactcggagttgaagagtcttggactcagttgcttaaagttagttatcagaatcttcaa 27618573  T

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Target: scaffold0649 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0649
Description:

Target: scaffold0649; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 177
Target Start/End: Original strand, 5404 - 5487
Alignment:
Q  94 tgcctttgtttttcttattcttacaagaaaactgattttgttttatggcagatgaagaaattcggggttgaagagtcttggact 177  Q
    ||||||||||||| | ||| ||  ||| ||| |||||||||| ||||||||||||| |||||  | ||||||||||||||||||    
T  5404 tgcctttgtttttgtcattattctaaggaaaatgattttgttatatggcagatgaaaaaatttagagttgaagagtcttggact 5487  T

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Target: scaffold0867 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0867
Description:

Target: scaffold0867; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 97 - 178
Target Start/End: Complemental strand, 4770 - 4689
Alignment:
Q  97 ctttgtttttcttattcttacaagaaaactgattttgttttatggcagatgaagaaattcggggttgaagagtcttggactc 178  Q
    |||||||||||| ||  || ||| |||||| ||||| || ||||||| ||||||||||| || ||| |||||||||||||||    
T  4770 ctttgtttttctcatgatttcaaaaaaactcattttattatatggcaaatgaagaaatttggagttcaagagtcttggactc 4689  T

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Target: scaffold0464 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 218
Target Start/End: Original strand, 8061 - 8151
Alignment:
Q  128 attttgttttatggcagatgaagaaattcggggttgaagagtcttggactccatttcttaaagttagttaccagaatcttcaaatagatta 218  Q
    ||||||||||||||  ||||| | ||||||| ||| |||| ||||||| || |||||| ||| ||||||  ||| |||||||||| |||||    
T  8061 attttgttttatggatgatgatggaattcggagttcaagattcttggattcaatttctcaaaattagttttcaggatcttcaaattgatta 8151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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