View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5255_low_46 (Length: 251)

Name: NF5255_low_46
Description: NF5255
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5255_low_46
NF5255_low_46
[»] chr5 (45 HSPs)
chr5 (13-219)||(27647933-27648140)
chr5 (13-197)||(6940545-6940729)
chr5 (13-199)||(5479199-5479385)
chr5 (13-195)||(1395992-1396174)
chr5 (13-199)||(20655089-20655275)
chr5 (13-199)||(29275627-29275813)
chr5 (13-199)||(10729482-10729668)
chr5 (13-199)||(17373204-17373390)
chr5 (13-199)||(20874691-20874877)
chr5 (13-199)||(34107378-34107564)
chr5 (13-199)||(34110655-34110841)
chr5 (13-199)||(38246905-38247091)
chr5 (13-199)||(33375765-33375953)
chr5 (13-197)||(24223206-24223390)
chr5 (13-184)||(1394541-1394712)
chr5 (13-199)||(16526346-16526532)
chr5 (13-199)||(25099276-25099462)
chr5 (13-199)||(25158366-25158552)
chr5 (13-199)||(33570347-33570533)
chr5 (13-199)||(2398982-2399166)
chr5 (13-190)||(14141156-14141333)
chr5 (13-180)||(17913744-17913911)
chr5 (104-199)||(40177135-40177230)
chr5 (13-57)||(1395907-1395951)
chr5 (13-57)||(2399209-2399253)
chr5 (13-57)||(5479115-5479159)
chr5 (13-57)||(6940767-6940811)
chr5 (13-57)||(10729711-10729755)
chr5 (13-57)||(14141376-14141420)
chr5 (13-57)||(16526576-16526620)
chr5 (13-57)||(17373433-17373477)
chr5 (13-57)||(20874604-20874648)
chr5 (13-57)||(24223433-24223477)
chr5 (13-57)||(27647845-27647889)
chr5 (13-57)||(33570577-33570621)
chr5 (13-57)||(34107607-34107651)
chr5 (13-57)||(34110566-34110610)
chr5 (13-57)||(38247134-38247178)
chr5 (13-57)||(40177033-40177077)
chr5 (13-57)||(1394749-1394793)
chr5 (13-57)||(25158593-25158637)
chr5 (13-57)||(33375680-33375724)
chr5 (13-57)||(17913658-17913702)
chr5 (13-57)||(20655313-20655357)
chr5 (13-53)||(29275540-29275580)
[»] chr6 (31 HSPs)
chr6 (13-199)||(10584768-10584954)
chr6 (14-199)||(13533771-13533956)
chr6 (13-199)||(15044725-15044911)
chr6 (13-199)||(17202435-17202621)
chr6 (13-199)||(3592896-3593082)
chr6 (13-199)||(12597305-12597491)
chr6 (13-199)||(19997668-19997854)
chr6 (13-199)||(2005431-2005617)
chr6 (13-199)||(33645945-33646131)
chr6 (13-199)||(28099637-28099823)
chr6 (13-199)||(2266771-2266965)
chr6 (13-169)||(17594819-17594976)
chr6 (13-136)||(8539603-8539726)
chr6 (13-137)||(25448752-25448876)
chr6 (114-199)||(1405603-1405688)
chr6 (104-219)||(33035527-33035647)
chr6 (13-57)||(2266684-2266728)
chr6 (13-57)||(10584995-10585039)
chr6 (13-57)||(12597534-12597578)
chr6 (13-57)||(15044639-15044683)
chr6 (13-57)||(17202348-17202392)
chr6 (13-57)||(17594733-17594777)
chr6 (13-57)||(19997580-19997624)
chr6 (13-57)||(28099867-28099911)
chr6 (13-57)||(33645858-33645902)
chr6 (13-57)||(2005348-2005392)
chr6 (13-57)||(3589064-3589108)
chr6 (13-57)||(3592087-3592131)
chr6 (13-57)||(3592812-3592856)
chr6 (13-57)||(25448665-25448709)
chr6 (20-57)||(8539523-8539560)
[»] chr3 (43 HSPs)
chr3 (13-199)||(20671252-20671438)
chr3 (13-199)||(26948801-26948987)
chr3 (13-199)||(39146443-39146629)
chr3 (13-199)||(4584474-4584660)
chr3 (13-199)||(31488414-31488600)
chr3 (13-199)||(36076494-36076680)
chr3 (13-219)||(24119210-24119418)
chr3 (13-199)||(45557924-45558110)
chr3 (13-199)||(12264203-12264389)
chr3 (13-199)||(38653967-38654153)
chr3 (13-199)||(43363651-43363837)
chr3 (13-199)||(49478211-49478397)
chr3 (13-199)||(49672565-49672751)
chr3 (13-199)||(54073030-54073216)
chr3 (13-199)||(1941760-1941946)
chr3 (13-199)||(21098307-21098493)
chr3 (13-199)||(34121358-34121544)
chr3 (13-199)||(49506389-49506575)
chr3 (13-199)||(55041623-55041815)
chr3 (13-199)||(3898425-3898611)
chr3 (58-199)||(40014693-40014834)
chr3 (73-199)||(26051342-26051469)
chr3 (13-81)||(26052236-26052304)
chr3 (13-57)||(1941989-1942033)
chr3 (13-57)||(3898338-3898382)
chr3 (13-57)||(12264115-12264159)
chr3 (13-57)||(20671166-20671210)
chr3 (13-57)||(26052348-26052392)
chr3 (13-57)||(26948689-26948733)
chr3 (13-57)||(31488329-31488373)
chr3 (13-57)||(34121271-34121315)
chr3 (13-57)||(38654197-38654241)
chr3 (13-57)||(43363880-43363924)
chr3 (13-57)||(49478124-49478168)
chr3 (13-57)||(49672478-49672522)
chr3 (13-57)||(55041857-55041901)
chr3 (13-56)||(21098219-21098262)
chr3 (13-54)||(36076723-36076764)
chr3 (13-57)||(24119126-24119170)
chr3 (13-57)||(39146363-39146407)
chr3 (13-57)||(45558152-45558196)
chr3 (133-199)||(6460208-6460273)
chr3 (25-57)||(4584703-4584735)
[»] chr2 (32 HSPs)
chr2 (13-199)||(36279494-36279680)
chr2 (13-199)||(31424012-31424198)
chr2 (13-199)||(8700264-8700450)
chr2 (17-219)||(16214831-16215033)
chr2 (17-199)||(19596403-19596585)
chr2 (13-199)||(26231299-26231485)
chr2 (13-199)||(34007749-34007935)
chr2 (13-199)||(999271-999457)
chr2 (13-199)||(18351554-18351740)
chr2 (13-199)||(41663240-41663426)
chr2 (13-199)||(41664513-41664699)
chr2 (13-199)||(42055202-42055386)
chr2 (13-199)||(6120555-6120741)
chr2 (13-199)||(20544828-20545014)
chr2 (13-199)||(44902085-44902270)
chr2 (13-199)||(42441963-42442153)
chr2 (73-199)||(692242-692368)
chr2 (86-199)||(27944836-27944949)
chr2 (13-58)||(19596632-19596677)
chr2 (13-57)||(6120467-6120511)
chr2 (13-57)||(16214741-16214785)
chr2 (13-57)||(18351467-18351511)
chr2 (13-57)||(26231526-26231570)
chr2 (13-57)||(31423924-31423968)
chr2 (13-57)||(34007979-34008023)
chr2 (13-57)||(41663152-41663196)
chr2 (13-57)||(42441876-42441920)
chr2 (13-57)||(999499-999543)
chr2 (13-57)||(36279722-36279766)
chr2 (13-57)||(41664426-41664470)
chr2 (13-57)||(44901998-44902042)
chr2 (13-57)||(8700180-8700224)
[»] chr1 (38 HSPs)
chr1 (13-219)||(39727983-39728190)
chr1 (13-199)||(18706549-18706734)
chr1 (13-199)||(23482747-23482933)
chr1 (13-197)||(7333947-7334131)
chr1 (13-219)||(35614819-35615026)
chr1 (13-199)||(4266384-4266570)
chr1 (13-199)||(34888726-34888912)
chr1 (13-199)||(35614070-35614256)
chr1 (13-199)||(38444634-38444820)
chr1 (13-199)||(38913787-38913973)
chr1 (13-199)||(50151063-50151249)
chr1 (13-199)||(9216034-9216220)
chr1 (18-218)||(19764571-19764771)
chr1 (13-199)||(52687154-52687339)
chr1 (13-184)||(2951421-2951592)
chr1 (27-199)||(1231813-1231985)
chr1 (13-199)||(18855273-18855458)
chr1 (13-148)||(19768467-19768602)
chr1 (13-144)||(2590338-2590468)
chr1 (85-199)||(31018240-31018354)
chr1 (85-199)||(50326076-50326190)
chr1 (125-199)||(5061338-5061412)
chr1 (13-57)||(1231725-1231769)
chr1 (13-57)||(2951635-2951679)
chr1 (13-57)||(4266297-4266341)
chr1 (13-57)||(18706772-18706816)
chr1 (13-57)||(19764813-19764857)
chr1 (13-57)||(19768382-19768426)
chr1 (13-57)||(23482971-23483015)
chr1 (13-57)||(35614734-35614778)
chr1 (13-57)||(38914016-38914060)
chr1 (13-57)||(52036309-52036353)
chr1 (13-53)||(7333863-7333903)
chr1 (13-57)||(35613984-35614028)
chr1 (13-57)||(38444549-38444593)
chr1 (13-57)||(52687380-52687424)
chr1 (145-199)||(29942153-29942207)
chr1 (13-57)||(39727896-39727940)
[»] chr8 (54 HSPs)
chr8 (13-199)||(11725193-11725379)
chr8 (13-199)||(18841907-18842093)
chr8 (13-199)||(24408879-24409065)
chr8 (13-199)||(28274254-28274440)
chr8 (13-199)||(39257446-39257632)
chr8 (14-199)||(28582859-28583044)
chr8 (13-199)||(40026803-40026989)
chr8 (13-199)||(18568868-18569054)
chr8 (13-199)||(19412834-19413021)
chr8 (13-191)||(19240666-19240844)
chr8 (13-191)||(19313850-19314028)
chr8 (18-199)||(35122362-35122543)
chr8 (13-199)||(15961135-15961321)
chr8 (13-199)||(18210664-18210850)
chr8 (13-199)||(18997703-18997889)
chr8 (13-199)||(30473924-30474110)
chr8 (13-199)||(44832226-44832412)
chr8 (13-199)||(995855-996041)
chr8 (13-199)||(6299060-6299246)
chr8 (13-199)||(10477940-10478126)
chr8 (13-199)||(18175384-18175570)
chr8 (13-199)||(32110901-32111087)
chr8 (17-199)||(44836916-44837098)
chr8 (13-199)||(11142464-11142656)
chr8 (13-187)||(24004779-24004953)
chr8 (45-199)||(39997726-39997880)
chr8 (13-128)||(23353688-23353803)
chr8 (13-97)||(25875441-25875525)
chr8 (13-70)||(18481929-18481986)
chr8 (13-57)||(39997665-39997709)
chr8 (13-57)||(6299289-6299333)
chr8 (13-57)||(10477853-10477897)
chr8 (13-57)||(11142381-11142425)
chr8 (13-57)||(11725106-11725150)
chr8 (13-57)||(18175297-18175341)
chr8 (13-57)||(18997616-18997660)
chr8 (13-57)||(19240580-19240624)
chr8 (13-57)||(19313764-19313808)
chr8 (13-57)||(19412752-19412796)
chr8 (13-57)||(23353845-23353889)
chr8 (13-57)||(24408795-24408839)
chr8 (13-57)||(30474152-30474196)
chr8 (13-57)||(32111130-32111174)
chr8 (13-57)||(35122584-35122628)
chr8 (13-57)||(39997580-39997624)
chr8 (13-57)||(44832456-44832500)
chr8 (13-57)||(44836824-44836868)
chr8 (14-57)||(18210892-18210935)
chr8 (13-57)||(996084-996128)
chr8 (13-57)||(18841829-18841873)
chr8 (13-57)||(25875566-25875610)
chr8 (13-57)||(28582777-28582821)
chr8 (17-57)||(39257362-39257402)
chr8 (13-59)||(18568817-18568863)
[»] chr7 (38 HSPs)
chr7 (13-199)||(21669984-21670170)
chr7 (13-199)||(43933584-43933770)
chr7 (13-198)||(21656631-21656816)
chr7 (13-199)||(15109705-15109891)
chr7 (13-199)||(16376585-16376771)
chr7 (13-199)||(24924082-24924268)
chr7 (13-199)||(27903457-27903643)
chr7 (13-199)||(40968894-40969080)
chr7 (13-199)||(3840681-3840867)
chr7 (13-199)||(13786173-13786359)
chr7 (13-199)||(21753532-21753718)
chr7 (13-199)||(21804612-21804798)
chr7 (13-199)||(38163379-38163565)
chr7 (13-199)||(42242194-42242380)
chr7 (13-196)||(27138571-27138754)
chr7 (13-199)||(33916987-33917173)
chr7 (13-199)||(21341826-21342012)
chr7 (13-199)||(17178277-17178464)
chr7 (13-199)||(31373459-31373645)
chr7 (45-199)||(39030292-39030446)
chr7 (13-56)||(31096703-31096746)
chr7 (13-57)||(3840911-3840955)
chr7 (13-57)||(16376811-16376855)
chr7 (13-57)||(21341737-21341781)
chr7 (13-57)||(21656547-21656591)
chr7 (13-57)||(21669895-21669939)
chr7 (13-57)||(21804841-21804885)
chr7 (13-57)||(27138797-27138841)
chr7 (13-57)||(31373370-31373414)
chr7 (13-57)||(33917216-33917260)
chr7 (13-57)||(42242423-42242467)
chr7 (13-56)||(17178508-17178551)
chr7 (16-57)||(24924001-24924042)
chr7 (13-54)||(43933815-43933856)
chr7 (13-57)||(15109929-15109973)
chr7 (13-57)||(21753759-21753803)
chr7 (13-57)||(27903685-27903729)
chr7 (13-57)||(31096615-31096659)
[»] chr4 (44 HSPs)
chr4 (14-199)||(16904992-16905177)
chr4 (14-199)||(35760585-35760770)
chr4 (13-199)||(31628527-31628713)
chr4 (13-199)||(46256037-46256223)
chr4 (13-199)||(39058397-39058583)
chr4 (13-197)||(45977032-45977216)
chr4 (13-188)||(48118582-48118757)
chr4 (13-199)||(44376119-44376305)
chr4 (13-190)||(45782478-45782655)
chr4 (13-199)||(16917928-16918114)
chr4 (13-199)||(33139511-33139697)
chr4 (13-199)||(52434627-52434813)
chr4 (13-199)||(30824962-30825148)
chr4 (13-199)||(37590844-37591030)
chr4 (13-190)||(52098239-52098417)
chr4 (13-199)||(53143302-53143488)
chr4 (13-199)||(54624960-54625139)
chr4 (13-199)||(31966009-31966195)
chr4 (13-199)||(37651669-37651855)
chr4 (13-199)||(41387129-41387315)
chr4 (17-199)||(47142840-47143022)
chr4 (13-199)||(12090499-12090686)
chr4 (13-174)||(50229771-50229933)
chr4 (13-57)||(12090729-12090773)
chr4 (13-57)||(16905217-16905261)
chr4 (13-57)||(16918157-16918201)
chr4 (13-57)||(30825191-30825235)
chr4 (13-57)||(31966238-31966282)
chr4 (13-57)||(39058621-39058665)
chr4 (13-57)||(45977263-45977307)
chr4 (13-57)||(47143069-47143113)
chr4 (13-57)||(48118801-48118845)
chr4 (13-57)||(52098459-52098503)
chr4 (13-57)||(52434540-52434584)
chr4 (13-57)||(53143533-53143577)
chr4 (13-57)||(54624879-54624923)
chr4 (145-199)||(50229712-50229766)
chr4 (13-57)||(41387042-41387086)
chr4 (13-57)||(44376346-44376390)
chr4 (13-53)||(50229979-50230019)
chr4 (13-59)||(31628718-31628764)
chr4 (19-57)||(45782696-45782734)
chr4 (13-57)||(37591069-37591113)
chr4 (13-57)||(46255954-46255998)
[»] scaffold0173 (1 HSPs)
scaffold0173 (13-199)||(19350-19536)
[»] scaffold0022 (2 HSPs)
scaffold0022 (13-199)||(149090-149276)
scaffold0022 (13-57)||(149317-149361)
[»] scaffold0031 (1 HSPs)
scaffold0031 (13-199)||(46277-46463)
[»] scaffold0515 (1 HSPs)
scaffold0515 (68-199)||(6101-6232)
[»] scaffold0306 (1 HSPs)
scaffold0306 (68-199)||(6111-6242)
[»] scaffold0836 (1 HSPs)
scaffold0836 (87-199)||(5318-5430)


Alignment Details
Target: chr5 (Bit Score: 140; Significance: 2e-73; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 13 - 219
Target Start/End: Original strand, 27647933 - 27648140
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||| | |||||||||    
T  27647933 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 27648032  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa-ctcacgggtgga 211  Q
    ||||| ||||| || || ||||||||||||||||||||| |||||||||||| |||| |||| | |||||||||||||||||||||| | ||||||||||    
T  27648033 aattccaacatctgtatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatcgcacgggtgga 27648132  T
Q  212 aagtctag 219  Q
    ||||||||    
T  27648133 aagtctag 27648140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 13 - 197
Target Start/End: Complemental strand, 6940729 - 6940545
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| |||||||| |||||||||||    
T  6940729 aatataacgttgacatataattttaacaaaagaatgaagtaacatacgattgataaaaattaatatttttcaggtgaataagtgtggtgtatgaggttcg 6940630  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctac 197  Q
    ||||| ||||| ||||| ||||||||||||||||||||| |||||||||||| |||| |||| | ||||||||||||||||||||    
T  6940629 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctac 6940545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 13 - 199
Target Start/End: Original strand, 5479199 - 5479385
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||| || | |||||||||    
T  5479199 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtagtgtctgaggttcg 5479298  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| | ||| ||||||||| ||||||||||| |||||||||||| |||| |||| ||||||||||||||||||||||||    
T  5479299 aattccaacatctacatatatttgggatcacatatttcattctctttgatatgcattgagatttatttttgtctactacatctacaa 5479385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 13 - 195
Target Start/End: Original strand, 1395992 - 1396174
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||||||||||||| |||||||| | |||||||||    
T  1395992 aatataacattgacatataattttaacaaaagaatgaagtaacacacgactgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 1396091  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatct 195  Q
    ||||| ||||| ||||  ||||||||||||||||||||| |||||||||||| |||| |||| | ||||||||| ||||||||    
T  1396092 aattccaacatctgcagatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctgctacatct 1396174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 13 - 199
Target Start/End: Complemental strand, 20655275 - 20655089
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||| | || ||||||||||| ||||||||||||||||||| |||||||| | |||||||||    
T  20655275 aatataacattgacatataattttaacaaaagaatgaagtaagacacaattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 20655176  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| ||||||||||||||| ||| | |||||||||||| |||| |||| | ||||||||||||||||||||||    
T  20655175 aattccaacatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgtttttgtctactacatctacaa 20655089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 13 - 199
Target Start/End: Original strand, 29275627 - 29275813
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||  ||||||||||||||||||| |||||||| | |||||||||    
T  29275627 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaagttaatatttttaaggtgaataagtgtggtgtctgaggttcg 29275726  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| ||||||||||||||| ||||| |||||||||||| |||| | || | |||||||||| |||||||||||    
T  29275727 aattccaacatctgcatatatttgggaccacatgtttcattctctttgatatgcattgaaatttgtttttgtctattacatctacaa 29275813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 13 - 199
Target Start/End: Complemental strand, 10729668 - 10729482
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||  ||||||| || ||||| | |||||||||    
T  10729668 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttttggtgaataagcgtggtgtctgaggttcg 10729569  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| ||||||||||||||||||||| |||||| ||||| |||| |||| | ||||||||||||| ||||||||    
T  10729568 aattccaacatctgcatatatttgggaccacatatttcattctcttggatatgcattgagatttgtttttgtctactatatctacaa 10729482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 13 - 199
Target Start/End: Complemental strand, 17373390 - 17373204
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||  ||||||| || ||||| | |||||||||    
T  17373390 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 17373291  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| ||||||||||||||||||||| |||||||||||| |||| |||| | ||||||||||||| ||||||||    
T  17373290 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaa 17373204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 13 - 199
Target Start/End: Original strand, 20874691 - 20874877
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||  ||||||| || ||||| | |||||||||    
T  20874691 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 20874790  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| ||||||||||||||||||||| |||||||||||| |||| |||| | ||||||||||||| ||||||||    
T  20874791 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaa 20874877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 13 - 199
Target Start/End: Complemental strand, 34107564 - 34107378
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||  ||||||| || ||||| | |||||||||    
T  34107564 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 34107465  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| ||||||||||||||||||||| |||||||||||| |||| |||| | ||||||||||||| ||||||||    
T  34107464 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaa 34107378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 13 - 199
Target Start/End: Original strand, 34110655 - 34110841
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||  ||||||| || ||||| | |||||||||    
T  34110655 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 34110754  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| ||||||||||||||||||||| |||||||||||| |||| |||| | ||||||||||||| ||||||||    
T  34110755 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaa 34110841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 13 - 199
Target Start/End: Complemental strand, 38247091 - 38246905
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||  ||||||| || ||||| | |||||||||    
T  38247091 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 38246992  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| ||||||||||||||||||||| |||||||||||| |||| |||| | ||||||||||||| ||||||||    
T  38246991 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaa 38246905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 13 - 199
Target Start/End: Original strand, 33375765 - 33375953
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| ||||||||||||||||||| |||||||| | |||||||||    
T  33375765 aatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 33375864  T
Q  113 aattctaacatgtgcatgtatttggg--accacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| ||||||||  ||||||| ||| | |||||||||||| |||| |||| | ||||||||||||||||||||||    
T  33375865 aattccaacatctgcatatatttgggacaccacatgttttattctctttgatatgcattgagatttgtttttgtctactacatctacaa 33375953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 13 - 197
Target Start/End: Complemental strand, 24223390 - 24223206
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    ||||| ||||||||||||| |||||||||||||||||||||||| ||||||| |||| | ||||||||||||||||||| |||||||| | |||||||||    
T  24223390 aatatcacattgacatatacttttaacaaaagaatgaagtaacacacgattggtaaagagtaatatttttaaggtgaataagtgtggtgtctgaggttcg 24223291  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctac 197  Q
    ||||| ||||| ||||| ||||||||||||||||||||| ||||||| |||| |||| |||| | ||||||||||||||||||||    
T  24223290 aattccaacatctgcatatatttgggaccacatatttcattctctttcatatgcattgagatttgtttttgtctactacatctac 24223206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 13 - 184
Target Start/End: Complemental strand, 1394712 - 1394541
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||  |||||||| | |||||||||    
T  1394712 aatataacattgacatataaatttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaacaagtgtggtgtttgaggttcg 1394613  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgt 184  Q
    ||||| ||||| ||||| ||||||||||||||||||||| |||||||||||| |||| |||| | |||||||    
T  1394612 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt 1394541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 13 - 199
Target Start/End: Complemental strand, 16526532 - 16526346
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||  ||||||| || ||||| | |||||||||    
T  16526532 aatataatattgacatataattttaacaaaagaacgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 16526433  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| ||||||||||||||||||||| |||||||||||| |||| |||| | ||||||||||||| ||||||||    
T  16526432 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaa 16526346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 13 - 199
Target Start/End: Complemental strand, 25099462 - 25099276
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| |||||||||||||| |||| ||||||||   |||||||||    
T  25099462 aatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggcgaataagtgtggtgcctgaggttcg 25099363  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| |||||| |||||||| ||| | |||||||||||| |||| |||| | ||||||||||||||||||||||    
T  25099362 aattccaacatctgcatatatttgtgaccacatgttttattctctttgatatgcattcagatttgtttttgtctactacatctacaa 25099276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 13 - 199
Target Start/End: Complemental strand, 25158552 - 25158366
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| |||||||||||||| |||| ||||||||   |||||||||    
T  25158552 aatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggcgaataagtgtggtgcctgaggttcg 25158453  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| |||||| |||||||| ||| | |||||||||||| |||| |||| | ||||||||||||||||||||||    
T  25158452 aattccaacatctgcatatatttgtgaccacatgttttattctctttgatatgcattcagatttgtttttgtctactacatctacaa 25158366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 13 - 199
Target Start/End: Complemental strand, 33570533 - 33570347
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||  ||||||| || ||||| | |||||||||    
T  33570533 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 33570434  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| ||||||||||||||||||||| |||||||| ||| |||| |||| | ||||||||||||| ||||||||    
T  33570433 aattccaacatctgcatatatttgggaccacatatttcattctctttggtatgcattgagatttgtttttgtctactatatctacaa 33570347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 13 - 199
Target Start/End: Complemental strand, 2399166 - 2398982
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    ||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||||  ||||||| || ||||| | |||||||||    
T  2399166 aatataatattgacatataattttaacaaaagaatgaagtaaca--cgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 2399069  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| ||||||||||||||||||||| |||||||||||| |||| |||| | ||||||||||||| ||||||||    
T  2399068 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaa 2398982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 13 - 190
Target Start/End: Complemental strand, 14141333 - 14141156
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    ||||||| |||| ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||  ||||||| || ||||| | |||||||||    
T  14141333 aatataatattggcatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 14141234  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctacta 190  Q
    ||||| ||||| ||||| ||||||||||||||||||||| |||||||||||| |||| |||| | |||||||||||||    
T  14141233 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctacta 14141156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 13 - 180
Target Start/End: Original strand, 17913744 - 17913911
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||| | ||||||||||||||||||| |||||||||| |||||||||    
T  17913744 aatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaagattaatatttttaaggtgaataagtgtggtatttgaggttcg 17913843  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtattt 180  Q
    ||||| ||||| | ||| ||||||||||||||| ||| | |||||||||||| |||| |||| |||||    
T  17913844 aattccaacatctacatatatttgggaccacatgttttattctctttgatatgcattgagatttattt 17913911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 104 - 199
Target Start/End: Original strand, 40177135 - 40177230
Alignment:
Q  104 tgaggttcgaattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    |||||||||||||| ||||| ||||| ||||||||||||||||||||| ||||||| |||| |||| |||| | ||||||||||||| ||||||||    
T  40177135 tgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctcttttatatgcattgagatttgtttttgtctactatatctacaa 40177230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 1395907 - 1395951
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  1395907 aatataacattaacatataatttttacaaaagaatgaagtaacat 1395951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 2399253 - 2399209
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  2399253 aatataacattaacatataatttttacaaaagaatgaagtaacat 2399209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 5479115 - 5479159
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  5479115 aatataacattaacatataatttttacaaaagaatgaagtaacat 5479159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 6940811 - 6940767
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  6940811 aatataacattaacatataatttttacaaaagaatgaagtaacat 6940767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 10729755 - 10729711
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  10729755 aatataacattaacatataatttttacaaaagaatgaagtaacat 10729711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 14141420 - 14141376
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  14141420 aatataacattaacatataatttttacaaaagaatgaagtaacat 14141376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 16526620 - 16526576
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  16526620 aatataacattaacatataatttttacaaaagaatgaagtaacat 16526576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 17373477 - 17373433
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  17373477 aatataacattaacatataatttttacaaaagaatgaagtaacat 17373433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 20874604 - 20874648
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  20874604 aatataacattaacatataatttttacaaaagaatgaagtaacat 20874648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 24223477 - 24223433
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  24223477 aatataacattaacatataatttttacaaaagaatgaagtaacat 24223433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 27647845 - 27647889
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  27647845 aatataacattaacatataatttttacaaaagaatgaagtaacat 27647889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 33570621 - 33570577
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  33570621 aatataacattaacatataatttttacaaaagaatgaagtaacat 33570577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 34107651 - 34107607
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  34107651 aatataacattaacatataatttttacaaaagaatgaagtaacat 34107607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 34110566 - 34110610
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  34110566 aatataacattaacatataatttttacaaaagaatgaagtaacat 34110610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 38247178 - 38247134
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  38247178 aatataacattaacatataatttttacaaaagaatgaagtaacat 38247134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 40177033 - 40177077
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  40177033 aatataacattaacatataatttttacaaaagaatgaagtaacat 40177077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 1394793 - 1394749
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    |||||||||||  ||||||||||| ||||||||||||||||||||    
T  1394793 aatataacattaccatataatttttacaaaagaatgaagtaacat 1394749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 25158637 - 25158593
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| |||||| |||||||||||||    
T  25158637 aatataacattaacatataatttttacaaaataatgaagtaacat 25158593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 33375680 - 33375724
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| |||||| |||||||||||||    
T  33375680 aatataacattaacatataatttttacaaaataatgaagtaacat 33375724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 17913658 - 17913702
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| || ||||||||| |||||| |||||||||||||    
T  17913658 aatataacattaacgtataatttttacaaaataatgaagtaacat 17913702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 20655357 - 20655313
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| ||||||||||||  ||||| |||||||||||||    
T  20655357 aatataacattaacatataatttttccaaaataatgaagtaacat 20655313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 29275540 - 29275580
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagta 53  Q
    ||||||||||| ||||||| |||| ||||||||||||||||    
T  29275540 aatataacattaacatatattttttacaaaagaatgaagta 29275580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 135; Significance: 2e-70; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 13 - 199
Target Start/End: Complemental strand, 10584954 - 10584768
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||| || | |||||||||    
T  10584954 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtagtgtctgaggttcg 10584855  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| ||||||||||||||||||||| |||||||||||| ||||||||| | ||||||||||||||||||||||    
T  10584854 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattaagatttgtttttgtctactacatctacaa 10584768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 14 - 199
Target Start/End: Original strand, 13533771 - 13533956
Alignment:
Q  14 atataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcga 113  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||| | ||||||||||    
T  13533771 atataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcga 13533870  T
Q  114 attctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    |||| ||||| ||||| ||||||||||||||||||||| ||||||||||||||||| |||| | ||||| ||||||||||||||||    
T  13533871 attccaacatctgcatatatttgggaccacatatttcattctctttgatatacattgagatttgtttttatctactacatctacaa 13533956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 13 - 199
Target Start/End: Original strand, 15044725 - 15044911
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| ||||||||||||||||||| |||||||| | |||||||||    
T  15044725 aatataacattgacatataattttaacaaaagaatgaagtaaaacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 15044824  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| ||||||||||||||||||| | |||||||||||| |||| | || ||||||||||||||||||||||||    
T  15044825 aattccaacatctgcatatatttgggaccacatattttattctctttgatatgcattgaaatttatttttgtctactacatctacaa 15044911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 13 - 199
Target Start/End: Original strand, 17202435 - 17202621
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||| | |||||||||    
T  17202435 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 17202534  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| ||||||||||||||||||||| |||||||||||| ||||  ||| | | ||||||||||||||||||||    
T  17202535 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgtgatttgtatttgtctactacatctacaa 17202621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 13 - 199
Target Start/End: Original strand, 3592896 - 3593082
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    ||||||||||||| |||||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||||| |||||||| | |||||||||    
T  3592896 aatataacattgagatataattttaacaaaagaatgaagtaacacacgattcataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 3592995  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| || || ||||||||| ||||||||||| |||||| ||||| |||| |||| | ||||||||||||||||||||||    
T  3592996 aattccaacatctgaatatatttgggatcacatatttcattctcttggatatgcattgagatttgtttttgtctactacatctacaa 3593082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 13 - 199
Target Start/End: Complemental strand, 12597491 - 12597305
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||  ||||||| || ||||| | |||||||||    
T  12597491 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 12597392  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| ||||||||||||||||||||| |||||||||||| |||| |||| | ||||||||||||| ||||||||    
T  12597391 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaa 12597305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 13 - 199
Target Start/End: Original strand, 19997668 - 19997854
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||  ||||||| || ||||| | |||||||||    
T  19997668 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 19997767  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| ||||||||||||||||||||| |||||||||||| |||| |||| | ||||||||||||| ||||||||    
T  19997768 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaa 19997854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 13 - 199
Target Start/End: Original strand, 2005431 - 2005617
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| ||||||||||||||||||| |||||||| | |||||||||    
T  2005431 aatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 2005530  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| |||||  |||||||| ||| | |||||||||||| |||| |||| | |||||||||||| |||||||||    
T  2005531 aattccaacatctgcatatatttaagaccacatgttttattctctttgatatgcattgagatttgtttttgtctactgcatctacaa 2005617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 13 - 199
Target Start/End: Original strand, 33645945 - 33646131
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||  ||||||| || ||||| | |||||||||    
T  33645945 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 33646044  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| ||||||| ||||||||||||| |||||||||||| |||| |||| | ||||||||||||| ||||||||    
T  33646045 aattccaacatctgcatatatttggaaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaa 33646131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 13 - 199
Target Start/End: Complemental strand, 28099823 - 28099637
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||  ||||||| || ||||| | |||||||||    
T  28099823 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 28099724  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| |||||  |||| ||||||||||||||||||||| |||||||||||| |||| |||| | |||||||||| || ||||||||    
T  28099723 aattccaacatcagcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaa 28099637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 13 - 199
Target Start/End: Original strand, 2266771 - 2266965
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattag--------tgtggtatat 104  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||  ||||||| ||         ||||| | |    
T  2266771 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtcgtggtgtct 2266870  T
Q  105 gaggttcgaattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||||||||||| ||||| ||||| ||||||||||||||||||||| |||||||||||| |||| |||| | ||||||||||||| ||||||||    
T  2266871 gaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaa 2266965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 13 - 169
Target Start/End: Original strand, 17594819 - 17594976
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaa-ataatatttttaaggtgaattagtgtggtatatgaggttc 111  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||| | ||| |||     
T  17594819 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaatttaatatttttaaggtgaataagtgtggtgtctgaagttt 17594918  T
Q  112 gaattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacatt 169  Q
    |||||  ||||| | ||| ||||||||||||||||||||| | |||||||||| ||||    
T  17594919 gaatttcaacatctccatatatttgggaccacatatttcattttctttgatatgcatt 17594976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 13 - 136
Target Start/End: Original strand, 8539603 - 8539726
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||| | |||||||||    
T  8539603 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 8539702  T
Q  113 aattctaacatgtgcatgtatttg 136  Q
    ||||| ||||| ||||| ||||||    
T  8539703 aattccaacatctgcatatatttg 8539726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 13 - 137
Target Start/End: Original strand, 25448752 - 25448876
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    ||||||| ||||||||||||||||||||||| |||||||||||| |||||||||||||| |||||| |||  ||||||| || ||||| | |||| ||||    
T  25448752 aatataatattgacatataattttaacaaaaaaatgaagtaacacacgattgataaaaattaatatatttttggtgaataagcgtggtgtctgagtttcg 25448851  T
Q  113 aattctaacatgtgcatgtatttgg 137  Q
    ||||| ||||| | ||| |||||||    
T  25448852 aattccaacatctacatatatttgg 25448876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 114 - 199
Target Start/End: Complemental strand, 1405688 - 1405603
Alignment:
Q  114 attctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    |||| ||||| ||||| ||||||||| ||||||||||| ||||||| ||||||||| |||| | ||||| ||||||||||||||||    
T  1405688 attccaacatctgcatatatttgggatcacatatttcattctctttaatatacattgagatttgtttttatctactacatctacaa 1405603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 219
Target Start/End: Original strand, 33035527 - 33035647
Alignment:
Q  104 tgaggttcgaattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa---- 199  Q
    |||| ||||||||| | ||| ||||| |||||| |||||||| ||| | ||||||||| || |||| |||| | ||||||||||||||||||||||        
T  33035527 tgagattcgaattccagcatctgcatatatttgagaccacatgttttattctctttgacatgcattgagatttgtttttgtctactacatctacaatgta 33035626  T
Q  200 -ctcacgggtggaaagtctag 219  Q
     | ||||||||||||||||||    
T  33035627 ccgcacgggtggaaagtctag 33035647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 2266684 - 2266728
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  2266684 aatataacattaacatataatttttacaaaagaatgaagtaacat 2266728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 10585039 - 10584995
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  10585039 aatataacattaacatataatttttacaaaagaatgaagtaacat 10584995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 12597578 - 12597534
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  12597578 aatataacattaacatataatttttacaaaagaatgaagtaacat 12597534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 15044639 - 15044683
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  15044639 aatataacattaacatataatttttacaaaagaatgaagtaacat 15044683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 17202348 - 17202392
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  17202348 aatataacattaacatataatttttacaaaagaatgaagtaacat 17202392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 17594733 - 17594777
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  17594733 aatataacattaacatataatttttacaaaagaatgaagtaacat 17594777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 19997580 - 19997624
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  19997580 aatataacattaacatataatttttacaaaagaatgaagtaacat 19997624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 28099911 - 28099867
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  28099911 aatataacattaacatataatttttacaaaagaatgaagtaacat 28099867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 33645858 - 33645902
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  33645858 aatataacattaacatataatttttacaaaagaatgaagtaacat 33645902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 2005348 - 2005392
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| |||||| |||||||||||||    
T  2005348 aatataacattaacatataatttttacaaaataatgaagtaacat 2005392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 3589064 - 3589108
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| |||||||| |||||||||||    
T  3589064 aatataacattaacatataatttttacaaaagagtgaagtaacat 3589108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 3592087 - 3592131
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||| ||||||    
T  3592087 aatataacattaacatataatttttacaaaagaatgaaataacat 3592131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 3592812 - 3592856
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    |||| |||||| |||||||||||| ||||||||||||||||||||    
T  3592812 aatacaacattaacatataatttttacaaaagaatgaagtaacat 3592856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 25448665 - 25448709
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| |||||||||| |||||||||    
T  25448665 aatataacattaacatataatttttacaaaagaataaagtaacat 25448709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 8539523 - 8539560
Alignment:
Q  20 cattgacatataattttaacaaaagaatgaagtaacat 57  Q
    |||| |||||||||||| ||||||||||||||||||||    
T  8539523 cattaacatataatttttacaaaagaatgaagtaacat 8539560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 135; Significance: 2e-70; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 13 - 199
Target Start/End: Original strand, 20671252 - 20671438
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||| | |||||||||    
T  20671252 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 20671351  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| ||||||||||||||||||||| |||||||||||| |||| |||| | ||||||||||||||||||||||    
T  20671352 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaa 20671438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 13 - 199
Target Start/End: Original strand, 26948801 - 26948987
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||  ||||||||||||||||||| |||||||| | |||||||||    
T  26948801 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaagttaatatttttaaggtgaataagtgtggtgtctgaggttcg 26948900  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| ||||||||||||||||||||| |||||||||||| |||| |||| | ||||||||||||||||||||||    
T  26948901 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaa 26948987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 13 - 199
Target Start/End: Original strand, 39146443 - 39146629
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| ||||||||||||||||||| |||||||| | |||||||||    
T  39146443 aatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 39146542  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| ||||||||||||||||||| | |||||||||||| |||| |||| ||||||||||||||||||||||||    
T  39146543 aattccaacatctgcatatatttgggaccacatattttattctctttgatatgcattgagatttatttttgtctactacatctacaa 39146629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 13 - 199
Target Start/End: Complemental strand, 4584660 - 4584474
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| ||||||||||||||||||| |||||||| | ||||||||     
T  4584660 aatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttca 4584561  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| ||||||||||||||||||||| |||||||||||| |||| |||| | ||||||||||||||||||||||    
T  4584560 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaa 4584474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 13 - 199
Target Start/End: Original strand, 31488414 - 31488600
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||| |||||||| | |||||||||    
T  31488414 aatataacattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 31488513  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| |||||||||| |||||||||| |||||||||||| |||| |||| | ||||||||||||||||||||||    
T  31488514 aattccaacatctgcatatatttgggacaacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaa 31488600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 13 - 199
Target Start/End: Complemental strand, 36076680 - 36076494
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||| | ||| |||||    
T  36076680 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaagttcg 36076581  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| ||||||||||||||||||||| ||||||| |||| |||| |||| | ||||||||||||||||||||||    
T  36076580 aattccaacatctgcatatatttgggaccacatatttcattctctttaatatgcattgagatttgtttttgtctactacatctacaa 36076494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 13 - 219
Target Start/End: Original strand, 24119210 - 24119418
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||| | ||||||| |    
T  24119210 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggtttg 24119309  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa--ctcacgggtgg 210  Q
    ||||| ||||| ||||| |||||||||||| |||||||| | ||||| |||| |||| |||| | |||||||||||||||||||| |  | |||||||||    
T  24119310 aattccaacatctgcatatatttgggaccatatatttcattatctttaatatgcattgagatttgtttttgtctactacatctacgatccgcacgggtgg 24119409  T
Q  211 aaagtctag 219  Q
    |||||||||    
T  24119410 aaagtctag 24119418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 13 - 199
Target Start/End: Complemental strand, 45558110 - 45557924
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||| | |||||||||||||| ||||||||||||||||||| |||||||| | |||||||||    
T  45558110 aatataatattgacatataattttaacaaaagaatgaagtaatacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 45558011  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||  ||||| ||||| || |||||||||||||||||| |||||||||||| |||| |||| | ||||||||||||||||||||||    
T  45558010 aatttcaacatctgcatatacttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaa 45557924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 13 - 199
Target Start/End: Original strand, 12264203 - 12264389
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||  ||||||| || ||||| | |||||||||    
T  12264203 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 12264302  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| ||||||||||||||||||||| |||||||||||| |||| |||| | ||||||||||||| ||||||||    
T  12264303 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaa 12264389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 13 - 199
Target Start/End: Complemental strand, 38654153 - 38653967
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||  ||||||| || ||||| | |||||||||    
T  38654153 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 38654054  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| ||||||||||||||||||||| |||||||||||| |||| |||| | ||||||||||||| ||||||||    
T  38654053 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaa 38653967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 13 - 199
Target Start/End: Complemental strand, 43363837 - 43363651
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||  ||||||| || ||||| | |||||||||    
T  43363837 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 43363738  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| ||||||||||||||||||||| |||||||||||| |||| |||| | ||||||||||||| ||||||||    
T  43363737 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaa 43363651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 13 - 199
Target Start/End: Original strand, 49478211 - 49478397
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||| | |||||||||    
T  49478211 aatataacattgacatataattttaataaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 49478310  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| ||||||||||||||||||||| | ||||||||||  ||| |||| | ||||| |||||||| |||||||    
T  49478311 aattccaacatttgcatatatttgggaccacatatttcattatctttgatatgtattgagatttgtttttatctactacgtctacaa 49478397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 13 - 199
Target Start/End: Original strand, 49672565 - 49672751
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||  ||||||| || ||||| | |||||||||    
T  49672565 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 49672664  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| ||||||||||||||||||||| |||||||||||| |||| |||| | ||||||||||||| ||||||||    
T  49672665 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaa 49672751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 13 - 199
Target Start/End: Original strand, 54073030 - 54073216
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||  ||||||| || ||||| | |||||||||    
T  54073030 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 54073129  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| ||||||||||||||||||||| |||||||||||| |||| |||| | ||||||||||||| ||||||||    
T  54073130 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaa 54073216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 13 - 199
Target Start/End: Complemental strand, 1941946 - 1941760
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||  ||||||| || ||| | | |||||||||    
T  1941946 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtgatgtctgaggttcg 1941847  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| ||||||||||||||||||||| |||||||||||| |||| |||| | ||||||||||||| ||||||||    
T  1941846 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaa 1941760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 13 - 199
Target Start/End: Original strand, 21098307 - 21098493
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||  ||||||| || ||||| | |||||||||    
T  21098307 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 21098406  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| ||||||||||||||||||||| |||||||||||| |||| |||| | |||||||||| || ||||||||    
T  21098407 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaa 21098493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 13 - 199
Target Start/End: Original strand, 34121358 - 34121544
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||  ||||||| || ||||| | |||||||||    
T  34121358 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 34121457  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| ||||||||||||| ||||||| |||||||||||| |||| |||| | ||||||||||||| ||||||||    
T  34121458 aattccaacatctgcatatatttgggaccacgtatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaa 34121544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 13 - 199
Target Start/End: Complemental strand, 49506575 - 49506389
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    ||||||| ||||||||||||||||||||||||||||||||| || |||||||||||||| ||||||||||  ||||||| || ||||| | |||||||||    
T  49506575 aatataatattgacatataattttaacaaaagaatgaagtaccacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 49506476  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| ||||||||||||||||||||| |||||||||||| |||| |||| | ||||||||||||| ||||||||    
T  49506475 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaa 49506389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 13 - 199
Target Start/End: Complemental strand, 55041815 - 55041623
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaa------taatatttttaaggtgaattagtgtggtatatga 106  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||       ||||||||||||||||||| |||||||| | |||    
T  55041815 aatataacattgacatataattttaacaaaagagtgaagtaacacacgattgataaaaataaaaattaatatttttaaggtgaataagtgtggtgtctga 55041716  T
Q  107 ggttcgaattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||||||||| ||||| ||||| ||||||| ||||||||||||| |||||||||||| |||| |||| | ||||||||||||||||||||||    
T  55041715 ggttcgaattcaaacatctgcatatatttggaaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaa 55041623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 13 - 199
Target Start/End: Original strand, 3898425 - 3898611
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||  ||||||| || ||||| | ||||||||     
T  3898425 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttca 3898524  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| ||||||||||||||||||||| ||||||| |||| |||| |||| | ||||||||||||| ||||||||    
T  3898525 aattccaacatctgcatatatttgggaccacatatttcattctctttaatatgcattgagatttgtttttgtctactatatctacaa 3898611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 58 - 199
Target Start/End: Complemental strand, 40014834 - 40014693
Alignment:
Q  58 acgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcgaattctaacatgtgcatgtatttgggaccacatatttcaatctct 157  Q
    |||||||||||||| ||||||||||  ||||||| || ||||| | |||||||||||||| ||||| ||||| ||||||||||||||||||||| |||||    
T  40014834 acgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctct 40014735  T
Q  158 ttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||||| |||| |||| | ||||||| || || ||||||||    
T  40014734 ttgatatgcattgagatttgtttttgtttattatatctacaa 40014693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 73 - 199
Target Start/End: Complemental strand, 26051469 - 26051342
Alignment:
Q  73 taatatttttaaggtgaattagtgtggtatatgaggttcgaattctaacatgtgcatgtatttggg-accacatatttcaatctctttgatatacattaa 171  Q
    ||||||||||||||||||| || ||||| | |||||||||||||| ||| |  |||| |||||||| ||||||||||||| |||||||||||| |||| |    
T  26051469 taatatttttaaggtgaataagcgtggtgtctgaggttcgaattccaacctcagcatatatttggggaccacatatttcattctctttgatatgcattga 26051370  T
Q  172 gatgtatttttgtctactacatctacaa 199  Q
    ||| | ||||||||||||||||||||||    
T  26051369 gatttgtttttgtctactacatctacaa 26051342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 26052304 - 26052236
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttt 81  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  26052304 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttt 26052236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 1942033 - 1941989
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  1942033 aatataacattaacatataatttttacaaaagaatgaagtaacat 1941989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 3898338 - 3898382
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  3898338 aatataacattaacatataatttttacaaaagaatgaagtaacat 3898382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 12264115 - 12264159
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  12264115 aatataacattaacatataatttttacaaaagaatgaagtaacat 12264159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 20671166 - 20671210
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  20671166 aatataacattaacatataatttttacaaaagaatgaagtaacat 20671210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 26052392 - 26052348
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  26052392 aatataacattaacatataatttttacaaaagaatgaagtaacat 26052348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 26948689 - 26948733
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  26948689 aatataacattaacatataatttttacaaaagaatgaagtaacat 26948733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 31488329 - 31488373
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  31488329 aatataacattaacatataatttttacaaaagaatgaagtaacat 31488373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 34121271 - 34121315
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  34121271 aatataacattaacatataatttttacaaaagaatgaagtaacat 34121315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 38654241 - 38654197
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  38654241 aatataacattaacatataatttttacaaaagaatgaagtaacat 38654197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 43363924 - 43363880
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  43363924 aatataacattaacatataatttttacaaaagaatgaagtaacat 43363880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 49478124 - 49478168
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  49478124 aatataacattaacatataatttttacaaaagaatgaagtaacat 49478168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 49672478 - 49672522
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  49672478 aatataacattaacatataatttttacaaaagaatgaagtaacat 49672522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 55041901 - 55041857
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  55041901 aatataacattaacatataatttttacaaaagaatgaagtaacat 55041857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 21098219 - 21098262
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  21098219 aatataacattaacatataatttttacaaaagaatgaagtaaca 21098262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 36076764 - 36076723
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  36076764 aatataacattaacatataatttttacaaaagaatgaagtaa 36076723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 24119126 - 24119170
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    |||||||| || |||||||||||| ||||||||||||||||||||    
T  24119126 aatataactttaacatataatttttacaaaagaatgaagtaacat 24119170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 39146363 - 39146407
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| |||||| |||||||||||||    
T  39146363 aatataacattaacatataatttttacaaaataatgaagtaacat 39146407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 45558196 - 45558152
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| |||||| |||||||||||||    
T  45558196 aatataacattaacatataatttttacaaaaaaatgaagtaacat 45558152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 199
Target Start/End: Complemental strand, 6460273 - 6460208
Alignment:
Q  133 tttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||||||||||||||| | ||| ||||||||  ||| |||| | ||||||||||||||||||||||    
T  6460273 tttgggaccacatattttattct-tttgatatgtattgagatttgtttttgtctactacatctacaa 6460208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 57
Target Start/End: Complemental strand, 4584735 - 4584703
Alignment:
Q  25 acatataattttaacaaaagaatgaagtaacat 57  Q
    |||||||||||| ||||||||||||||||||||    
T  4584735 acatataatttttacaaaagaatgaagtaacat 4584703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 135; Significance: 2e-70; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 13 - 199
Target Start/End: Complemental strand, 36279680 - 36279494
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||||| |||| ||||    
T  36279680 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtatctgagattcg 36279581  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| ||||||||||||||||||||| ||||||||||||||||| | || | ||||||||||||||||||||||    
T  36279580 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatacattgatatttgtttttgtctactacatctacaa 36279494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 13 - 199
Target Start/End: Original strand, 31424012 - 31424198
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||| |||||||| |||||||||||    
T  31424012 aatataacattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatttttaaggtgaataagtgtggtgtatgaggttcg 31424111  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| | ||| ||||||||||||||||||||| |||||||||||| |||| |||| | ||||||||||||||||||||||    
T  31424112 aattccaacatctacatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaa 31424198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 13 - 199
Target Start/End: Original strand, 8700264 - 8700450
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||  | |||||| |||||||||||    
T  8700264 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaaaaaatgtggtgtatgaggttcg 8700363  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| ||||||||||||||||||||| |||||||||||| |||| | || | ||||||||||||||||||||||    
T  8700364 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgaaatttgtttttgtctactacatctacaa 8700450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 17 - 219
Target Start/End: Original strand, 16214831 - 16215033
Alignment:
Q  17 taacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcgaatt 116  Q
    ||||| |||||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||||| |||||||| |  ||||||||||||    
T  16214831 taacactgacatataattttaacaaaagaatgaagtaacacacgattaataaaaattaatatttttaaggtgaataagtgtggtgttagaggttcgaatt 16214930  T
Q  117 ctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaactcacgggtggaaagtc 216  Q
    |  |||| ||||| ||||| ||||||||||||||| |||||||||||| |||| |||| ||||||||||||||||||||||| | |||||||||||||||    
T  16214931 cctacatttgcatatattttggaccacatatttcattctctttgatatgcattgagatttatttttgtctactacatctacaccgcacgggtggaaagtc 16215030  T
Q  217 tag 219  Q
    |||    
T  16215031 tag 16215033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 17 - 199
Target Start/End: Complemental strand, 19596585 - 19596403
Alignment:
Q  17 taacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcgaatt 116  Q
    |||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||| || ||||| | |||||||||||||    
T  19596585 taacattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatttttaaggtgaataagcgtggtgtctgaggttcgaatt 19596486  T
Q  117 ctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    | ||||| ||||| ||||||||||||||||||||| ||||||| |||| |||| |||| | ||||||||||||||||||||||    
T  19596485 ccaacatctgcatatatttgggaccacatatttcattctctttaatatgcattgagatttgtttttgtctactacatctacaa 19596403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 13 - 199
Target Start/End: Complemental strand, 26231485 - 26231299
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||||| |||||||| | |||||||||    
T  26231485 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaagatgaataagtgtggtgtctgaggttcg 26231386  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| || || |||||| |||||||||||||| |||||||||||| |||| | || | ||||||||||||||||||||||    
T  26231385 aattccaacatctgaatatatttgagaccacatatttcattctctttgatatgcattgaaatttgtttttgtctactacatctacaa 26231299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 13 - 199
Target Start/End: Complemental strand, 34007935 - 34007749
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| |||||||||||||||| || |||||||| | |||||||||    
T  34007935 aatataacattgacatataattttaacaaaagaatgaagtaacacacgatttataaaaattaatatttttaaggtggataagtgtggtgtctgaggttcg 34007836  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| |||||  |||| |||||||||| |||||||||| |||||||||||| |||| |||| | ||||||||||||||||||||||    
T  34007835 aattccaacatcggcatatatttgggactacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaa 34007749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 13 - 199
Target Start/End: Complemental strand, 999457 - 999271
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| ||||||||||||||||||| |||||||| | |||||||||    
T  999457 aatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 999358  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| | ||| ||||||||||||||| ||| | |||||||||||| |||| |||| | ||||| ||||||||||||||||    
T  999357 aattccaacatctacatatatttgggaccacatgttttattctctttgatatgcattgagatttgtttttatctactacatctacaa 999271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 13 - 199
Target Start/End: Original strand, 18351554 - 18351740
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||  ||||||| || ||||| | |||||||||    
T  18351554 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtttgaggttcg 18351653  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| ||||||||||||||||||||| |||||||||||| |||| |||| | ||||||||||||| ||||||||    
T  18351654 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaa 18351740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 13 - 199
Target Start/End: Original strand, 41663240 - 41663426
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||  ||||||| || ||||| | |||||||||    
T  41663240 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 41663339  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| ||||||||||||||||||||| |||||||||||| |||| |||| | ||||||||||||| ||||||||    
T  41663340 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaa 41663426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 13 - 199
Target Start/End: Original strand, 41664513 - 41664699
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||  ||||||| || ||||| | |||||||||    
T  41664513 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 41664612  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| ||||||||||||||||||||| |||||||||||| |||| |||| | ||||||||||||| ||||||||    
T  41664613 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaa 41664699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 13 - 199
Target Start/End: Original strand, 42055202 - 42055386
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    |||||||||||||||||  || |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||| | |||||||||    
T  42055202 aatataacattgacata--atcttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 42055299  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| ||||||||| ||| ||||||| |||||||||||| |||| |||| | ||||||||||||||||||||||    
T  42055300 aattccaacatctgcatatatttgggatcacctatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaa 42055386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 13 - 199
Target Start/End: Original strand, 6120555 - 6120741
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    ||||||| ||||||||||| |||||||||||||||||||||||| |||||||||||||| ||||||||||  ||||||| || ||||| | |||||||||    
T  6120555 aatataatattgacatatagttttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 6120654  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| ||||||||||||||||||||| |||||||||||| |||| |||| | ||||||||||||| ||||||||    
T  6120655 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaa 6120741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 13 - 199
Target Start/End: Original strand, 20544828 - 20545014
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    ||||||| ||||||||||||||||||||||||||||||||| || |||||||||||||| ||||||||||  ||||||| || ||||| | | |||||||    
T  20544828 aatataatattgacatataattttaacaaaagaatgaagtaccacacgattgataaaaattaatatttttttggtgaataagcgtggtgttttaggttcg 20544927  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||||||||| ||||| ||||||||||||||||||||| |||||||||||| |||| |||| | ||||||||||| | ||||||||    
T  20544928 aattctaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctaccatatctacaa 20545014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 13 - 199
Target Start/End: Original strand, 44902085 - 44902270
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| || |||||||   |||||| || ||||| | |||||||||    
T  44902085 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaatta-tattttttttgtgaataagcgtggtgtctgaggttcg 44902183  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| ||||||||||||||||||||| |||||||||||| |||| |||| | ||||||||||||| ||||||||    
T  44902184 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaa 44902270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 13 - 199
Target Start/End: Original strand, 42441963 - 42442153
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgagg---- 108  Q
    ||||||| |||||||||||||||||||||||||||||||||||  |||||||||||||| ||||||||||  ||||||| || ||||| | |||||        
T  42441963 aatataatattgacatataattttaacaaaagaatgaagtaac--acgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 42442060  T
Q  109 --ttcgaattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
      ||||||||| ||||| ||||| ||||||||||||||||||||| |||||||||||| |||| |||| | ||||||||||||| ||||||||    
T  42442061 aattcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaa 42442153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 73 - 199
Target Start/End: Complemental strand, 692368 - 692242
Alignment:
Q  73 taatatttttaaggtgaattagtgtggtatatgaggttcgaattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaag 172  Q
    ||||||||||||||||||| |||||||| | |||||||||||||| ||||| ||||| |||||||||||| |||||||| |||||||||||| |||| ||    
T  692368 taatatttttaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccatatatttcattctctttgatatgcattgag 692269  T
Q  173 atgtatttttgtctactacatctacaa 199  Q
    || | |||||||||||||||| |||||    
T  692268 atttgtttttgtctactacatttacaa 692242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 86 - 199
Target Start/End: Complemental strand, 27944949 - 27944836
Alignment:
Q  86 gtgaattagtgtggtatatgaggttcgaattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtc 185  Q
    |||||| || ||||| | |||||||||||||| ||||| ||||| ||||||||||||||||||||| |||||||||||| |||| |||| | ||||||||    
T  27944949 gtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtc 27944850  T
Q  186 tactacatctacaa 199  Q
    ||||| ||||||||    
T  27944849 tactatatctacaa 27944836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 19596677 - 19596632
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacata 58  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||    
T  19596677 aatataacattaacatataattttaacaaaagaatgaagtaacata 19596632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 6120467 - 6120511
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  6120467 aatataacattaacatataatttttacaaaagaatgaagtaacat 6120511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 16214741 - 16214785
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  16214741 aatataacattaacatataatttttacaaaagaatgaagtaacat 16214785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 18351467 - 18351511
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  18351467 aatataacattaacatataatttttacaaaagaatgaagtaacat 18351511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 26231570 - 26231526
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  26231570 aatataacattaacatataatttttacaaaagaatgaagtaacat 26231526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 31423924 - 31423968
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  31423924 aatataacattaacatataatttttacaaaagaatgaagtaacat 31423968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 34008023 - 34007979
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  34008023 aatataacattaacatataatttttacaaaagaatgaagtaacat 34007979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 41663152 - 41663196
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  41663152 aatataacattaacatataatttttacaaaagaatgaagtaacat 41663196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 42441876 - 42441920
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  42441876 aatataacattaacatataatttttacaaaagaatgaagtaacat 42441920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 999543 - 999499
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| |||||| |||||||||||||    
T  999543 aatataacattaacatataatttttacaaaataatgaagtaacat 999499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 36279766 - 36279722
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||| ||||||    
T  36279766 aatataacattaacatataatttttacaaaagaatgaaataacat 36279722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 41664426 - 41664470
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| | ||||||||||||||||||    
T  41664426 aatataacattaacatataatttttataaaagaatgaagtaacat 41664470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 44901998 - 44902042
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||| ||||||    
T  44901998 aatataacattaacatataatttttacaaaagaatgaattaacat 44902042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 8700180 - 8700224
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||| ||||||| |||||| |||||||||||||    
T  8700180 aatataacattaacatgtaatttttacaaaataatgaagtaacat 8700224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 132; Significance: 1e-68; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 13 - 219
Target Start/End: Original strand, 39727983 - 39728190
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| ||||||||||||||||||| |||||||| | |||||||||    
T  39727983 aatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 39728082  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa-ctcacgggtgga 211  Q
    ||||| ||||| ||||| ||||||||||||||| ||| | |||||||||||| |||| |||| | |||||||||||||||||||||| | ||||||||||    
T  39728083 aattccaacatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgtttttgtctactacatctacaaccgcacgggtgga 39728182  T
Q  212 aagtctag 219  Q
    ||||||||    
T  39728183 aagtctag 39728190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 13 - 199
Target Start/End: Complemental strand, 18706734 - 18706549
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    |||||||| ||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||| |||||||| |||||||| |||||||||||    
T  18706734 aatataacgttgacatataattttaacaaaagaatgaagttacacacgattgataaaaattaatatttttcaggtgaataagtgtggtgtatgaggttcg 18706635  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| ||||| ||||||||||||||| |||||||||||| ||||||||| | ||||||||||||||||||||||    
T  18706634 aattccaacatctgcatatattt-ggaccacatatttcattctctttgatatgcattaagatttgtttttgtctactacatctacaa 18706549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 13 - 199
Target Start/End: Complemental strand, 23482933 - 23482747
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| |||||||| |||||||| |||||||||||    
T  23482933 aatataacgttgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttcaggtgaataagtgtggtgtatgaggttcg 23482834  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| |||||||||||||||||||||  ||||||||||| |||| |||| | | ||||||||||||||||||||    
T  23482833 aattccaacatctgcatatatttgggaccacatatttcatgctctttgatatgcattgagatttgtatttgtctactacatctacaa 23482747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 13 - 197
Target Start/End: Original strand, 7333947 - 7334131
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||||| |||||||| | ||||||| |    
T  7333947 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttatggtgaataagtgtggtgtctgaggtttg 7334046  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctac 197  Q
    ||||| ||||| ||||| ||||||||||||||||||| | |||||||||||| |||| |||| | ||||||||||||||||||||    
T  7334047 aattccaacatctgcatatatttgggaccacatattttattctctttgatatgcattgagatttgtttttgtctactacatctac 7334131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 13 - 219
Target Start/End: Original strand, 35614819 - 35615026
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||| ||| |||||||| | |||||||||    
T  35614819 aatatgacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttt-aaggtaaataagtgtggtgtctgaggttcg 35614917  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa--ctcacgggtgg 210  Q
    ||||| ||||| ||||| |||||| |||||||||||||| |||||||||||| ||||||||| | |||||||||||||||| |||||  | ||| |||||    
T  35614918 aattccaacatctgcatatatttgagaccacatatttcattctctttgatatgcattaagatttgtttttgtctactacatttacaatccgcacaggtgg 35615017  T
Q  211 aaagtctag 219  Q
    |||||||||    
T  35615018 aaagtctag 35615026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 13 - 199
Target Start/End: Original strand, 4266384 - 4266570
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||  ||||||| || ||||| | |||||||||    
T  4266384 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 4266483  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| ||||||||||||||||||||| |||||||||||| |||| |||| | ||||||||||||| ||||||||    
T  4266484 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaa 4266570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 13 - 199
Target Start/End: Complemental strand, 34888912 - 34888726
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||  ||||||| || ||||| | |||||||||    
T  34888912 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 34888813  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| ||||||||||||||||||||| |||||||||||| |||| |||| | ||||||||||||| ||||||||    
T  34888812 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaa 34888726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 13 - 199
Target Start/End: Original strand, 35614070 - 35614256
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| |||||||| |||||||| | | | |||||    
T  35614070 aatatgacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttcaggtgaataagtgtggtgtcttaagttcg 35614169  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| ||||||||||||||||||||| |||||||||||| |||| |||| | |||||||||||||||| |||||    
T  35614170 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatttacaa 35614256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 13 - 199
Target Start/End: Original strand, 38444634 - 38444820
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    ||||||||||||||||||||||||| |||||||||||||||||| |  ||||||||||| ||||||||||||||||||| |||||||| | ||| |||||    
T  38444634 aatataacattgacatataattttatcaaaagaatgaagtaacacattattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaagttcg 38444733  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||  ||||| ||||| ||||||||||||||||||||| |||||||||||| |||| |||| | ||||||||||||||||||||||    
T  38444734 aatttcaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaa 38444820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 13 - 199
Target Start/End: Complemental strand, 38913973 - 38913787
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||  ||||||| || ||||| | |||||||||    
T  38913973 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 38913874  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| ||||||||||||||||||||| |||||||||||| |||| |||| | ||||||||||||| ||||||||    
T  38913873 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaa 38913787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 13 - 199
Target Start/End: Original strand, 50151063 - 50151249
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||  ||||||| || ||||| | |||||||||    
T  50151063 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 50151162  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| ||||||||||||||||||||| |||||||||||| |||| |||| | ||||||||||||| ||||||||    
T  50151163 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaa 50151249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 13 - 199
Target Start/End: Original strand, 9216034 - 9216220
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| ||||||||||||||| ||| |||||||| | |||||||||    
T  9216034 aatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtaaataagtgtggtgtctgaggttcg 9216133  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| ||||||||||||||| ||| | |||||||||||| |||| |||| | ||||| ||||||| ||||||||    
T  9216134 aattccaacatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgtttttatctactatatctacaa 9216220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 18 - 218
Target Start/End: Complemental strand, 19764771 - 19764571
Alignment:
Q  18 aacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcgaattc 117  Q
    ||||||||||| |||||||||||||| |||||||||||| |||||| ||||||| ||||||||||||||||||| |||||||| | ||||||||||||||    
T  19764771 aacattgacatgtaattttaacaaaataatgaagtaacacacgattcataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaattc 19764672  T
Q  118 taacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaactcacgggtggaaagtct 217  Q
     ||||| ||||| ||||||||||||||||||||| ||| ||| |||| |||| |||| | ||||||| ||||||||||| | | |||||||| |||||||    
T  19764671 aaacatttgcatatatttgggaccacatatttcattctttttaatatgcattgagatttgtttttgtatactacatctataccgcacgggtgaaaagtct 19764572  T
Q  218 a 218  Q
    |    
T  19764571 a 19764571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 13 - 199
Target Start/End: Complemental strand, 52687339 - 52687154
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    |||||||||||||||||||||||||| |||| |||||||||||| |||||||||||||| ||||||||||||||||||| |||||||| | |||||||||    
T  52687339 aatataacattgacatataattttaataaaaaaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgt-tgaggttcg 52687241  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
     |||| ||||| ||||| ||||||||||||||||||||| ||||||| |||  |||| |||| | ||||||| ||||||||||||||    
T  52687240 gattccaacatctgcatatatttgggaccacatatttcattctctttcataggcattgagatttgtttttgtatactacatctacaa 52687154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 13 - 184
Target Start/End: Complemental strand, 2951592 - 2951421
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||  ||||||| || ||||| | |||||||||    
T  2951592 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 2951493  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgt 184  Q
    ||||| ||||| ||||| ||||||||||||||||||||| |||||||||||| |||| |||| | |||||||    
T  2951492 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttttttttgt 2951421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 27 - 199
Target Start/End: Original strand, 1231813 - 1231985
Alignment:
Q  27 atataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcgaattctaacatgtg 126  Q
    |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||  ||||||| || ||||| | |||||||||||||| ||||| ||    
T  1231813 atataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcgaattccaacatctg 1231912  T
Q  127 catgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||| ||||||||||||||||||||| |||||||||||| |||| |||| | ||||||||||||| || |||||    
T  1231913 catatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatttacaa 1231985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 13 - 199
Target Start/End: Complemental strand, 18855458 - 18855273
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||| | | |||||||||||| ||||||||||||||||||| |||||||| | |||||||||    
T  18855458 aatataacattgacatataattttaacaaaagaatgaagtaatacatgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 18855359  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||  ||||| | ||| ||||||||||||||| ||| | |||||||||||| |||| |||| |   |||||||||| |||||||||    
T  18855358 aatttcaacatctacatatatttgggaccacatgttttattctctttgatatgcattgagat-ttgatttgtctactgcatctacaa 18855273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 13 - 148
Target Start/End: Original strand, 19768467 - 19768602
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| |||||||| | |||||||||    
T  19768467 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttaagatgaataagtgtggtgtctgaggttcg 19768566  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatt 148  Q
    || |  ||||| | ||||||||||| ||||||||||    
T  19768567 aaattcaacatctacatgtatttggaaccacatatt 19768602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 13 - 144
Target Start/End: Original strand, 2590338 - 2590468
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| ||||||||||||||||||| |||||||| | ||||||| |    
T  2590338 aatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggtt-g 2590436  T
Q  113 aattctaacatgtgcatgtatttgggaccaca 144  Q
    ||||| ||||| ||||| ||||||| ||||||    
T  2590437 aattcgaacatctgcatatatttggaaccaca 2590468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 85 - 199
Target Start/End: Complemental strand, 31018354 - 31018240
Alignment:
Q  85 ggtgaattagtgtggtatatgaggttcgaattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgt 184  Q
    ||||||| || ||||| | |||||||||||||| ||||| ||||| ||||||||||||||||||||| |||||||||||| |||| |||| | |||||||    
T  31018354 ggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt 31018255  T
Q  185 ctactacatctacaa 199  Q
    |||||| ||||||||    
T  31018254 ctactatatctacaa 31018240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 85 - 199
Target Start/End: Original strand, 50326076 - 50326190
Alignment:
Q  85 ggtgaattagtgtggtatatgaggttcgaattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgt 184  Q
    ||||||| || ||||| | |||||||||||||| ||||| ||||| ||||||||||||||||||||| |||||||||||| |||| |||| | |||||||    
T  50326076 ggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt 50326175  T
Q  185 ctactacatctacaa 199  Q
    |||||| ||||||||    
T  50326176 ctactatatctacaa 50326190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 125 - 199
Target Start/End: Original strand, 5061338 - 5061412
Alignment:
Q  125 tgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||||||||||||||||||| |||||||||||| |||| |||| | ||||||||||||||||||||||    
T  5061338 tgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaa 5061412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 1231725 - 1231769
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  1231725 aatataacattaacatataatttttacaaaagaatgaagtaacat 1231769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 2951679 - 2951635
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  2951679 aatataacattaacatataatttttacaaaagaatgaagtaacat 2951635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 4266297 - 4266341
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  4266297 aatataacattaacatataatttttacaaaagaatgaagtaacat 4266341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 18706816 - 18706772
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  18706816 aatataacattaacatataatttttacaaaagaatgaagtaacat 18706772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 19764857 - 19764813
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  19764857 aatataacattaacatataatttttacaaaagaatgaagtaacat 19764813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 19768382 - 19768426
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  19768382 aatataacattaacatataatttttacaaaagaatgaagtaacat 19768426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 23483015 - 23482971
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  23483015 aatataacattaacatataatttttacaaaagaatgaagtaacat 23482971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 35614734 - 35614778
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  35614734 aatataacattaacatataatttttacaaaagaatgaagtaacat 35614778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 38914060 - 38914016
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  38914060 aatataacattaacatataatttttacaaaagaatgaagtaacat 38914016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 52036353 - 52036309
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  52036353 aatataacattaacatataatttttacaaaagaatgaagtaacat 52036309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 7333863 - 7333903
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagta 53  Q
    ||||||||||| |||||||||||| ||||||||||||||||    
T  7333863 aatataacattaacatataatttttacaaaagaatgaagta 7333903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 35613984 - 35614028
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||| ||| |||||||||||| ||||||||||||||||||||    
T  35613984 aatataaaattaacatataatttttacaaaagaatgaagtaacat 35614028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 38444549 - 38444593
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||| ||||||    
T  38444549 aatataacattaacatataatttttacaaaagaatgaattaacat 38444593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 52687424 - 52687380
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| |||||||||||||| |||||    
T  52687424 aatataacattaacatataatttttacaaaagaatgaagcaacat 52687380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 199
Target Start/End: Original strand, 29942153 - 29942207
Alignment:
Q  145 tatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||||| |||||||||||| |||| |||| | ||||||||||||| ||||||||    
T  29942153 tatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaa 29942207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 39727896 - 39727940
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||| ||||| |||||||||||| |||||| |||||||||||||    
T  39727896 aatattacattaacatataatttttacaaaataatgaagtaacat 39727940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 131; Significance: 5e-68; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 13 - 199
Target Start/End: Original strand, 11725193 - 11725379
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||| | |||||||||    
T  11725193 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 11725292  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| |||||| |||||||||||||| |||||||||||| |||| |||| | ||||||||||||||||||||||    
T  11725293 aattccaacatctgcatatatttgagaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaa 11725379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 13 - 199
Target Start/End: Original strand, 18841907 - 18842093
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||| | |||| ||||    
T  18841907 aatataacattgacatataattttaacaaaagaatgaagtaacatacaattgataaaaattaatatttttaaggtgaataagtgtggtgtctgagattcg 18842006  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| ||||| ||||||||||||||| |||||||||||| |||| |||| ||||||||||||||||||||||||    
T  18842007 aattccaacatctgcatatattttggaccacatatttcattctctttgatatgcattgagatttatttttgtctactacatctacaa 18842093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 13 - 199
Target Start/End: Original strand, 24408879 - 24409065
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||| ||||| |||||    
T  24408879 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtatgatgttcg 24408978  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| ||||||||||||||||||||| | |||||||||| ||||||||| | ||||| ||||||||||||||||    
T  24408979 aattccaacatctgcatatatttgggaccacatatttcattatctttgatatgcattaagatttgtttttatctactacatctacaa 24409065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 13 - 199
Target Start/End: Complemental strand, 28274440 - 28274254
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||| |||||||||||    
T  28274440 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtatgaggttcg 28274341  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||| | ||||||||||||||||||||| |||||||||||| |||| |||| | ||||||||| ||||||||||||    
T  28274340 aattccaacatctgcgtatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctgctacatctacaa 28274254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 13 - 199
Target Start/End: Original strand, 39257446 - 39257632
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||| | ||||||||     
T  39257446 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttca 39257545  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| ||||||||||||||||||||| |||||||||||| |||| |||| | ||||||||||||||||||||||    
T  39257546 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaa 39257632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 14 - 199
Target Start/End: Original strand, 28582859 - 28583044
Alignment:
Q  14 atataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcga 113  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||| | ||||||||||    
T  28582859 atataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcga 28582958  T
Q  114 attctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    |||| ||||| ||||| |||||| |||||||||||||| ||||||||||||||||| |||| | ||||| ||||||||||||||||    
T  28582959 attccaacatctgcatatatttgagaccacatatttcattctctttgatatacattgagatttgtttttatctactacatctacaa 28583044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 13 - 199
Target Start/End: Original strand, 40026803 - 40026989
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||| | ||||||||     
T  40026803 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttca 40026902  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| ||||||||||||||||||||| | |||||||||| |||| |||| | ||||||||||||||||||||||    
T  40026903 aattccaacatctgcatatatttgggaccacatatttcattatctttgatatgcattgagatttgtttttgtctactacatctacaa 40026989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 13 - 199
Target Start/End: Original strand, 18568868 - 18569054
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||||| |||||||| | |||||||||    
T  18568868 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaagatgaataagtgtggtgtttgaggttcg 18568967  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| ||||||||||||||||||| | |||||||||||| |||| |||| | ||||||||||| ||||||||||    
T  18568968 aattccaacatctgcatatatttgggaccacatattttattctctttgatatgcattgagatatgtttttgtctacaacatctacaa 18569054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 13 - 199
Target Start/End: Original strand, 19412834 - 19413021
Alignment:
Q  13 aatataacattgacatataattttaacaaaa-gaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttc 111  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| ||||| |||||||| ||||||||||||||||||| | |||||| | ||||||||    
T  19412834 aatataacattgacatataattttaacaaaaagaatgaagtaacacacgatggataaaaattaatatttttaaggtgaataactgtggtgtctgaggttc 19412933  T
Q  112 gaattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    |||||| ||||| ||||| ||||||||||||||||||||| |||||||||||| |||| |||| | ||||||||||||||||||||||    
T  19412934 gaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaa 19413021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 13 - 191
Target Start/End: Original strand, 19240666 - 19240844
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||| |||||| |||||||| | |||||||||    
T  19240666 aatataacattgacatataattttaacaaaagaatgaagtaacacaccattgataaaaattaatatttttaacgtgaataagtgtggtgtctgaggttcg 19240765  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactac 191  Q
    ||||| ||||| ||||| ||||||||||||||||||||| |||||||||||| |||| |||| | ||||||||||||||    
T  19240766 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactac 19240844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 13 - 191
Target Start/End: Original strand, 19313850 - 19314028
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||| |||||| |||||||| | |||||||||    
T  19313850 aatataacattgacatataattttaacaaaagaatgaagtaacacaccattgataaaaattaatatttttaacgtgaataagtgtggtgtctgaggttcg 19313949  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactac 191  Q
    ||||| ||||| ||||| ||||||||||||||||||||| |||||||||||| |||| |||| | ||||||||||||||    
T  19313950 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactac 19314028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 18 - 199
Target Start/End: Complemental strand, 35122543 - 35122362
Alignment:
Q  18 aacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcgaattc 117  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||| | |||| |||||||||    
T  35122543 aacattgacatataattttaataaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgagattcgaattc 35122444  T
Q  118 taacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
     ||||| ||||| ||||| ||||||||||||||| |||||||||||| |||| |||| | ||||||||||||||||||||||    
T  35122443 caacatctgcatatattttggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaa 35122362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 13 - 199
Target Start/End: Original strand, 15961135 - 15961321
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||  ||||||| || ||||| | |||||||||    
T  15961135 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 15961234  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| ||||||||||||||||||||| |||||||||||| |||| |||| | ||||||||||||| ||||||||    
T  15961235 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaa 15961321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 13 - 199
Target Start/End: Complemental strand, 18210850 - 18210664
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    |||||||||||||||||||| ||||||||||||| ||| ||||| |||||||||||||| ||||||||||||||||||| |||||||| | ||||||||     
T  18210850 aatataacattgacatataactttaacaaaagaaggaaataacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttca 18210751  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| |||||| |||||||||||||| |||||||||||| |||| |||| ||||||||||||||| ||||||||    
T  18210750 aattccaacatctgcatatatttgagaccacatatttcattctctttgatatgcattgagatttatttttgtctactatatctacaa 18210664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 13 - 199
Target Start/End: Original strand, 18997703 - 18997889
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||  ||||||| || ||||| | |||||||||    
T  18997703 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 18997802  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| ||||||||||||||||||||| |||||||||||| |||| |||| | ||||||||||||| ||||||||    
T  18997803 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaa 18997889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 13 - 199
Target Start/End: Complemental strand, 30474110 - 30473924
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||  ||||||| || ||||| | |||||||||    
T  30474110 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 30474011  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| ||||||||||||||||||||| |||||||||||| |||| |||| | ||||||||||||| ||||||||    
T  30474010 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaa 30473924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 13 - 199
Target Start/End: Complemental strand, 44832412 - 44832226
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||  ||||||| || ||||| | |||||||||    
T  44832412 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 44832313  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| ||||||||||||||||||||| |||||||||||| |||| |||| | ||||||||||||| ||||||||    
T  44832312 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaa 44832226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 13 - 199
Target Start/End: Complemental strand, 996041 - 995855
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||  ||||||||||  ||||||| || ||||| | |||||||||    
T  996041 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaagttaatatttttttggtgaataagcgtggtgtctgaggttcg 995942  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| ||||||||||||||||||||| |||||||||||| |||| |||| | ||||||||||||| ||||||||    
T  995941 aattccaacatatgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaa 995855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 13 - 199
Target Start/End: Complemental strand, 6299246 - 6299060
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    ||||||| |||||||||||||||||||||| ||||||||||||| |||||||||||||| ||||||||||  ||||||| || ||||| | |||||||||    
T  6299246 aatataatattgacatataattttaacaaaggaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 6299147  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| ||||||||||||||||||||| |||||||||||| |||| |||| | ||||||||||||| ||||||||    
T  6299146 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaa 6299060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 13 - 199
Target Start/End: Original strand, 10477940 - 10478126
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||  ||||||| || ||||| | |||||||||    
T  10477940 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 10478039  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| |||||| |||||||||||||| |||||||||||| |||| |||| | ||||||||||||| ||||||||    
T  10478040 aattccaacatctgcatatatttgtgaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaa 10478126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 13 - 199
Target Start/End: Original strand, 18175384 - 18175570
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||||| ||| ||||||| || ||||||||||  ||||||| |||||||| | |||||||||    
T  18175384 aatataatattgacatataattttaacaaaagaatgaagtaacacacgtttgataataattaatatttttttggtgaataagtgtggtgtctgaggttcg 18175483  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| ||||||||||||||||||||| |||||||||||| |||| |||| | ||||||||||||| ||||||||    
T  18175484 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaa 18175570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 13 - 199
Target Start/End: Complemental strand, 32111087 - 32110901
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||  ||||||| || ||||| | |||||||||    
T  32111087 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 32110988  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| ||||||| ||||||||||||| |||||||||||| |||| |||| | ||||||||||||| ||||||||    
T  32110987 aattccaacatctgcatatatttggaaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaa 32110901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 17 - 199
Target Start/End: Original strand, 44836916 - 44837098
Alignment:
Q  17 taacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcgaatt 116  Q
    ||||||||| |||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||| || ||||| | |||||||||||||    
T  44836916 taacattgagatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatttttaaggtgaataagcgtggtgtctgaggttcgaatt 44837015  T
Q  117 ctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    | ||||| ||||| ||||| ||||||||||||| | ||||||||||||  ||| |||| ||||||||||||||||||||||||    
T  44837016 ccaacatctgcatatatttaggaccacatattttattctctttgatatgtattgagatttatttttgtctactacatctacaa 44837098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 13 - 199
Target Start/End: Original strand, 11142464 - 11142656
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaa------taatatttttaaggtgaattagtgtggtatatga 106  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||       ||||||||||||||||||| |||||||| | |||    
T  11142464 aatataacactgacatataattttaacaaaagaatgaagtaacacacgattgataaaaataaaaattaatatttttaaggtgaataagtgtggtgtctga 11142563  T
Q  107 ggttcgaattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||||||||| ||||| ||||| ||||||||| ||||||||||| |||||||||||| |||| |||| | ||||||||||||||||||||||    
T  11142564 ggttcgaattccaacatctgcatatatttgggagcacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaa 11142656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 13 - 187
Target Start/End: Complemental strand, 24004953 - 24004779
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||| | | |||||||||||| ||||||||||||||||||| |||||||| | |||||||||    
T  24004953 aatataacattgacatataattttaacaaaagaatgaagtaagacatgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 24004854  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtcta 187  Q
    ||||  ||||| ||||| ||||||||||||||| ||| | |||||||||||| |||| |||| |  |||||||||    
T  24004853 aatttcaacatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgattttgtcta 24004779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 45 - 199
Target Start/End: Original strand, 39997726 - 39997880
Alignment:
Q  45 aatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcgaattctaacatgtgcatgtatttgggaccaca 144  Q
    |||||||||||| |||||||||||||| ||||||||| ||||||||| |||||||| | |||||||||||||| ||||| ||||| ||||||| ||||||    
T  39997726 aatgaagtaacacacgattgataaaaattaatattttaaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgcatatatttggaaccaca 39997825  T
Q  145 tatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||||| ||||||||||||||||| |||| | ||||||||||||||||||||||    
T  39997826 tatttcattctctttgatatacattgagatttgtttttgtctactacatctacaa 39997880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 13 - 128
Target Start/End: Complemental strand, 23353803 - 23353688
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||| |||| ||| | |||||||||    
T  23353803 aatataacattgacatataattttaacaaaagaatgaagtaacacaccattgataaaaattaatatttttaaggtgaataagtggggtgtctgaggttcg 23353704  T
Q  113 aattctaacatgtgca 128  Q
    ||||| ||||| ||||    
T  23353703 aattccaacatctgca 23353688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 25875525 - 25875441
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgt 97  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| ||||||||||||||||||| |||||    
T  25875525 aatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgt 25875441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 18481986 - 18481929
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaa 70  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  18481986 aatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaa 18481929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 39997665 - 39997709
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  39997665 aatataacattgacatataatttttacaaaagaatgaagtaacat 39997709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 6299333 - 6299289
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  6299333 aatataacattaacatataatttttacaaaagaatgaagtaacat 6299289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 10477853 - 10477897
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  10477853 aatataacattaacatataatttttacaaaagaatgaagtaacat 10477897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 11142381 - 11142425
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  11142381 aatataacattaacatataatttttacaaaagaatgaagtaacat 11142425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 11725106 - 11725150
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  11725106 aatataacattaacatataatttttacaaaagaatgaagtaacat 11725150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 18175297 - 18175341
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  18175297 aatataacattaacatataatttttacaaaagaatgaagtaacat 18175341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 18997616 - 18997660
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  18997616 aatataacattaacatataatttttacaaaagaatgaagtaacat 18997660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 19240580 - 19240624
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  19240580 aatataacattaacatataatttttacaaaagaatgaagtaacat 19240624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 19313764 - 19313808
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  19313764 aatataacattaacatataatttttacaaaagaatgaagtaacat 19313808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 19412752 - 19412796
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  19412752 aatataacattaacatataatttttacaaaagaatgaagtaacat 19412796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 23353889 - 23353845
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  23353889 aatataacattaacatataatttttacaaaagaatgaagtaacat 23353845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 24408795 - 24408839
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  24408795 aatataacattaacatataatttttacaaaagaatgaagtaacat 24408839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 30474196 - 30474152
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  30474196 aatataacattaacatataatttttacaaaagaatgaagtaacat 30474152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 32111174 - 32111130
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  32111174 aatataacattaacatataatttttacaaaagaatgaagtaacat 32111130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 35122628 - 35122584
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  35122628 aatataacattaacatataatttttacaaaagaatgaagtaacat 35122584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 39997580 - 39997624
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  39997580 aatataacattaacatataatttttacaaaagaatgaagtaacat 39997624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 44832500 - 44832456
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  44832500 aatataacattaacatataatttttacaaaagaatgaagtaacat 44832456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 44836824 - 44836868
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  44836824 aatataacattaacatataatttttacaaaagaatgaagtaacat 44836868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 18210935 - 18210892
Alignment:
Q  14 atataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    |||||||||| |||||||||||| ||||||||||||||||||||    
T  18210935 atataacattaacatataatttttacaaaagaatgaagtaacat 18210892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 996128 - 996084
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    |||| |||||| |||||||||||| ||||||||||||||||||||    
T  996128 aatacaacattaacatataatttttacaaaagaatgaagtaacat 996084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 18841829 - 18841873
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| || ||||||||| ||||||||||||||||||||    
T  18841829 aatataacattaacgtataatttttacaaaagaatgaagtaacat 18841873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 25875610 - 25875566
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| |||||| |||||||||||||    
T  25875610 aatataacattaacatataatttttacaaaataatgaagtaacat 25875566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 28582777 - 28582821
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| ||||| |||||| ||||||||||||||||||||    
T  28582777 aatataacattaacatacaatttttacaaaagaatgaagtaacat 28582821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 57
Target Start/End: Original strand, 39257362 - 39257402
Alignment:
Q  17 taacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||| |||||||||||| ||||||||||||||||||||    
T  39257362 taacattaacatataatttttacaaaagaatgaagtaacat 39257402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 18568817 - 18568863
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatac 59  Q
    |||||| |||| |||||||||||| |||||||||| |||||||||||    
T  18568817 aatatagcattaacatataatttttacaaaagaattaagtaacatac 18568863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 131; Significance: 5e-68; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 13 - 199
Target Start/End: Original strand, 21669984 - 21670170
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||| | |||||||||    
T  21669984 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 21670083  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| ||||||||||||||||||| | |||||||||||| |||| |||| | ||||||||||||||||||||||    
T  21670084 aattccaacatctgcatatatttgggaccacatattttattctctttgatatgcattgagatttgtttttgtctactacatctacaa 21670170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 13 - 199
Target Start/End: Complemental strand, 43933770 - 43933584
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||| | |||||||||    
T  43933770 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 43933671  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| ||||||||||||||||||| | ||||||| |||| |||| |||| | ||||||||||||||||||||||    
T  43933670 aattccaacatctgcatatatttgggaccacatattttattctcttttatatgcattgagatttttttttgtctactacatctacaa 43933584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 13 - 198
Target Start/End: Original strand, 21656631 - 21656816
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||| | |||||||||    
T  21656631 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 21656730  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctaca 198  Q
    ||||| ||||| ||||| ||||||||||||||||||| | |||||||||||| |||| |||| | |||||||||||| ||||||||    
T  21656731 aattccaacatctgcatatatttgggaccacatattttattctctttgatatgcattgagatttgtttttgtctacttcatctaca 21656816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 13 - 199
Target Start/End: Complemental strand, 15109891 - 15109705
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||| ||||||| ||||| |||||||| | |||||||||    
T  15109891 aatataacattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatacttttaagatgaataagtgtggtgtctgaggttcg 15109792  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| ||||||||||||||||||||| |||||||||||| |||| |||| | ||||||||||||||||||||||    
T  15109791 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaa 15109705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 13 - 199
Target Start/End: Complemental strand, 16376771 - 16376585
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| ||||||||||||||||||| |||||||| | |||||||||    
T  16376771 aatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 16376672  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| ||||||||||||||| ||| | |||||||||||| |||| |||| | ||||||||||||||||||||||    
T  16376671 aattccaacatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgtttttgtctactacatctacaa 16376585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 13 - 199
Target Start/End: Original strand, 24924082 - 24924268
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||  ||||||||||||||||||| |||||||| | ||||||||     
T  24924082 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaatttaatatttttaaggtgaataagtgtggtgtctgaggttca 24924181  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| | ||| ||||||||||||||||||||| |||||||||||| |||| |||| | ||||||||||||||||||||||    
T  24924182 aattccaacatctacatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaa 24924268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 13 - 199
Target Start/End: Complemental strand, 27903643 - 27903457
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    ||||||||||||||||| |||||||||||||||||||||||| | ||||||| |||||| ||||||||||||||||||| |||||||| |||||||||||    
T  27903643 aatataacattgacatagaattttaacaaaagaatgaagtaagacacgattggtaaaaattaatatttttaaggtgaataagtgtggtgtatgaggttcg 27903544  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| ||||||||||||||| ||| | |||||||||||| |||| |||| | ||||||||||||||||||||||    
T  27903543 aattccaacatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgtttttgtctactacatctacaa 27903457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 13 - 199
Target Start/End: Original strand, 40968894 - 40969080
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| ||||||||||||||||||| |||||||| | |||||||||    
T  40968894 aatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 40968993  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| ||||||||||||||| ||| | |||||||||||| |||| |||| | ||| ||||||||||||||||||    
T  40968994 aattccaacatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgtttgtgtctactacatctacaa 40969080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 13 - 199
Target Start/End: Complemental strand, 3840867 - 3840681
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||  ||||||| || ||||| | |||||||||    
T  3840867 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 3840768  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| ||||||||||||||||||||| |||||||||||| |||| |||| | ||||||||||||| ||||||||    
T  3840767 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaa 3840681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 13 - 199
Target Start/End: Original strand, 13786173 - 13786359
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    ||||||||||||||||||||||||||||||| |||||||||| |  ||||||||||||| ||||||||||||||||||| |||||||| | |||||||||    
T  13786173 aatataacattgacatataattttaacaaaaaaatgaagtaagacgcgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 13786272  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| ||||||||||||||| ||| | |||||||||||| |||| |||| | ||||||||||||||||||||||    
T  13786273 aattccaacatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgtttttgtctactacatctacaa 13786359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 13 - 199
Target Start/End: Complemental strand, 21753718 - 21753532
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| ||||||||||||||||||| |||||||| | | |||||||    
T  21753718 aatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctaaggttcg 21753619  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    |||| |||||| ||||| |||||| |||||||| ||| | |||||||||||| |||| |||| | ||||||||||||||||||||||    
T  21753618 aattttaacatctgcatatatttgagaccacatgttttattctctttgatatgcattgagatttgtttttgtctactacatctacaa 21753532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 13 - 199
Target Start/End: Complemental strand, 21804798 - 21804612
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||  ||||||| || ||||| | |||||||||    
T  21804798 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 21804699  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| ||||||||||||||||||||| |||||||||||| |||| |||| | ||||||||||||| ||||||||    
T  21804698 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaa 21804612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 13 - 199
Target Start/End: Complemental strand, 38163565 - 38163379
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||  ||||||| || ||||| | |||||||||    
T  38163565 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 38163466  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| ||||||||||||||||||||| |||||||||||| |||| |||| | ||||||||||||| ||||||||    
T  38163465 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaa 38163379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 13 - 199
Target Start/End: Complemental strand, 42242380 - 42242194
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||  ||||||| || ||||| | |||||||||    
T  42242380 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 42242281  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| ||||||||||||||||||||| |||||||||||| |||| |||| | ||||||||||||| ||||||||    
T  42242280 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaa 42242194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 13 - 196
Target Start/End: Complemental strand, 27138754 - 27138571
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||  ||||||| || ||||| | |||||||||    
T  27138754 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 27138655  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatcta 196  Q
    ||||| ||||| ||||| ||||||||||||||||||||| |||||||||||| |||| |||| | ||||||||||||| |||||    
T  27138654 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatcta 27138571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 13 - 199
Target Start/End: Complemental strand, 33917173 - 33916987
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||  ||||||| || ||||| | |||||||||    
T  33917173 aatataatattgacatataattttaacaaaagaatgaaataacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 33917074  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| ||||||||||||||||||||| |||||||||||| |||| |||| | ||||||||||||| ||||||||    
T  33917073 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaa 33916987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 13 - 199
Target Start/End: Original strand, 21341826 - 21342012
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||  ||||||| || ||||| | |||||||||    
T  21341826 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 21341925  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| |||||| ||| |||||||||| |||||||||||| |||| |||| |||||||||||| || ||||||||    
T  21341926 aattccaacatctgcatatatttgagactacatatttcattctctttgatatgcattgagatttatttttgtctattatatctacaa 21342012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 13 - 199
Target Start/End: Complemental strand, 17178464 - 17178277
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaa-ggtgaattagtgtggtatatgaggttc 111  Q
    ||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||||   ||||||| |||||||| | ||||||||    
T  17178464 aatataatattgacatataattttaacaaaagaatgaagtaacacccgattgataaaaattaatattttttttggtgaataagtgtggtgtctgaggttc 17178365  T
Q  112 gaattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    |||||| ||||| ||||| ||||||||||||||||||||| ||||||||||||  ||| |||| | ||||||||||||| ||||||||    
T  17178364 gaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgaattgagatttgtttttgtctactatatctacaa 17178277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 13 - 199
Target Start/End: Original strand, 31373459 - 31373645
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||| | |||||||||||||| ||||||||||  ||||||| || ||||| | |||||||||    
T  31373459 aatataatattgacatataattttaacaaaagaatgaagtaatacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 31373558  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||  ||||| ||||| ||||||||||||||||||||| |||||||||||| |||| |||| | |||||||||| || ||||||||    
T  31373559 aatttcaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaa 31373645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 45 - 199
Target Start/End: Complemental strand, 39030446 - 39030292
Alignment:
Q  45 aatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcgaattctaacatgtgcatgtatttgggaccaca 144  Q
    |||||||||| | |||||||||||||| ||||||||||||||||||| |||||||| | |||||||||||||| ||||| ||||| ||||||||||||||    
T  39030446 aatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccaca 39030347  T
Q  145 tatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    | ||| | |||||||||||| |||| | || | ||||||||||||||||||||||    
T  39030346 tgttttattctctttgatatgcattgaaatttgtttttgtctactacatctacaa 39030292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 31096703 - 31096746
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||||||||||||||||||||||||||||||||||||    
T  31096703 aatataatattgacatataattttaacaaaagaatgaagtaaca 31096746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 3840955 - 3840911
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  3840955 aatataacattaacatataatttttacaaaagaatgaagtaacat 3840911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 16376855 - 16376811
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    |||||||||||||||||||||||| |||||| |||||||||||||    
T  16376855 aatataacattgacatataatttttacaaaataatgaagtaacat 16376811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 21341737 - 21341781
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  21341737 aatataacattaacatataatttttacaaaagaatgaagtaacat 21341781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 21656547 - 21656591
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  21656547 aatataacattaacatataatttttacaaaagaatgaagtaacat 21656591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 21669895 - 21669939
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  21669895 aatataacattaacatataatttttacaaaagaatgaagtaacat 21669939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 21804885 - 21804841
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  21804885 aatataacattaacatataatttttacaaaagaatgaagtaacat 21804841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 27138841 - 27138797
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  27138841 aatataacattaacatataatttttacaaaagaatgaagtaacat 27138797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 31373370 - 31373414
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  31373370 aatataacattaacatataatttttacaaaagaatgaagtaacat 31373414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 33917260 - 33917216
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  33917260 aatataacattaacatataatttttacaaaagaatgaagtaacat 33917216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 42242467 - 42242423
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  42242467 aatataacattaacatataatttttacaaaagaatgaagtaacat 42242423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 17178551 - 17178508
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  17178551 aatataacattaacatataatttttacaaaagaatgaagtaaca 17178508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 24924001 - 24924042
Alignment:
Q  16 ataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    |||||||| |||||||||||| ||||||||||||||||||||    
T  24924001 ataacattaacatataatttttacaaaagaatgaagtaacat 24924042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 43933856 - 43933815
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  43933856 aatataacattaacatataatttttacaaaagaatgaagtaa 43933815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 15109973 - 15109929
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||| ||| |||||||||||| ||||||||||||||||||||    
T  15109973 aatataatattaacatataatttttacaaaagaatgaagtaacat 15109929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 21753803 - 21753759
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| |||||| |||||||||||||    
T  21753803 aatataacattaacatataatttttacaaaataatgaagtaacat 21753759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 27903729 - 27903685
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| |||||| |||||||||||||    
T  27903729 aatataacattaacatataatttttacaaaataatgaagtaacat 27903685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 31096615 - 31096659
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||| | ||||||||||||||||||||    
T  31096615 aatataacattaacatataattcttacaaaagaatgaagtaacat 31096659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 130; Significance: 2e-67; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 14 - 199
Target Start/End: Complemental strand, 16905177 - 16904992
Alignment:
Q  14 atataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcga 113  Q
    ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||| |||||||| | ||||||||||    
T  16905177 atataacattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcga 16905078  T
Q  114 attctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    |||| ||||| ||||| ||||||||||||||||||||| |||||||||||| |||| |||| | ||||||||||||||||||||||    
T  16905077 attccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaa 16904992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 14 - 199
Target Start/End: Original strand, 35760585 - 35760770
Alignment:
Q  14 atataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcga 113  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| | |||||| | ||||||||||    
T  35760585 atataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataattgtggtgtttgaggttcga 35760684  T
Q  114 attctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    |||| ||||| ||||| ||||||||||||||||||||| ||||||||||||||||| |||| ||||||| ||||||| ||||||||    
T  35760685 attccaacatctgcatatatttgggaccacatatttcattctctttgatatacattgagatttatttttatctactatatctacaa 35760770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 13 - 199
Target Start/End: Complemental strand, 31628713 - 31628527
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| |||||||| |||||||||||    
T  31628713 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttaagatgaataagtgtggtgtatgaggttcg 31628614  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| |||||| |||||||||||| | |||||||||||| |||| |||| | ||||||||||| ||||||||||    
T  31628613 aattccaacatctgcatatatttgagaccacatatttaattctctttgatatgcattgagatatgtttttgtctacaacatctacaa 31628527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 13 - 199
Target Start/End: Original strand, 46256037 - 46256223
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||| |||||||| | ||||||||     
T  46256037 aatataacattgacatataattttaacaaaagaatgaagtaagatacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcc 46256136  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| ||||||||||||||||||| | |||||||||||| |||| |||| | ||||||||||||||||||||||    
T  46256137 aattccaacatctgcatatatttgggaccacatattttattctctttgatatgcattgagatttgtttttgtctactacatctacaa 46256223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 13 - 199
Target Start/End: Complemental strand, 39058583 - 39058397
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||| |||||||||| |||||||||    
T  39058583 aatataacattgacatataattttaacaaaagaatgaagtaacacatgattgataaaaattaatatttttaaggtgaataagtgtggtatctgaggttcg 39058484  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| |  || ||||||||||||||||||||| ||||||||||||| ||||| || | ||||||||||||| ||||||||    
T  39058483 aattccaacatcttgatatatttgggaccacatatttcattctctttgatatatattaaaatttgtttttgtctactatatctacaa 39058397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 13 - 197
Target Start/End: Complemental strand, 45977216 - 45977032
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||| |||||||| | |||||||||    
T  45977216 aatataacattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 45977117  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctac 197  Q
    ||||| ||||| ||||| ||||| ||||||||||||||| |||||||||||| |||| | || ||||||| ||||||||||||||    
T  45977116 aattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgatatttatttttatctactacatctac 45977032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 13 - 188
Target Start/End: Complemental strand, 48118757 - 48118582
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||||  ||||||| | |||||||||    
T  48118757 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattggtaaaaattaatatttttaaggtgaatacgtgtggtgtttgaggttcg 48118658  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctac 188  Q
    ||||| ||||| ||||| ||||||||||||||||||||| |||||||||||| |||| |||| |||||||||||||    
T  48118657 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttatttttgtctac 48118582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 13 - 199
Target Start/End: Complemental strand, 44376305 - 44376119
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| ||||||||||||||||||| |||||||| | |||||||||    
T  44376305 aatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 44376206  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| |||||| |||||||| ||| | |||||||||||| |||| |||| | ||||||||||||||||||||||    
T  44376205 aattccaacatctgcatatatttgtgaccacatgttttattctctttgatatgcattgagatttgtttttgtctactacatctacaa 44376119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 13 - 190
Target Start/End: Complemental strand, 45782655 - 45782478
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||| | ||||||||     
T  45782655 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttca 45782556  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctacta 190  Q
    ||||| ||||| | ||| ||||| ||||||||||||||| ||||||||||||| ||| |||| |||||||||||||||    
T  45782555 aattccaacatcttcatatatttaggaccacatatttcattctctttgatatatattgagatttatttttgtctacta 45782478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 13 - 199
Target Start/End: Complemental strand, 16918114 - 16917928
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||  ||||||| || ||||| | |||||||||    
T  16918114 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 16918015  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| ||||||||||||||||||||| |||||||||||| |||| |||| | ||||||||||||| ||||||||    
T  16918014 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaa 16917928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 13 - 199
Target Start/End: Complemental strand, 33139697 - 33139511
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| ||||||||||||||||||| | |||||| | |||||||||    
T  33139697 aatataacattgacatataattttaacaaaagaatgaagtaatacacgattgataaaaattaatatttttaaggtgaataaatgtggtgtctgaggttcg 33139598  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| |||||||||| |||||||| | |||||||||||| |||| |||| | ||||||||||||| ||||||||    
T  33139597 aattccaacatctgcatatatttgggacaacatatttaattctctttgatatgcattgagatttgtttttgtctactaaatctacaa 33139511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 13 - 199
Target Start/End: Original strand, 52434627 - 52434813
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||  ||||||| || ||||| | |||||||||    
T  52434627 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 52434726  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| ||||||||||||||||||||| |||||||||||| |||| |||| | ||||||||||||| ||||||||    
T  52434727 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaa 52434813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 13 - 199
Target Start/End: Complemental strand, 30825148 - 30824962
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||  ||||||| || ||||| | |||||||||    
T  30825148 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 30825049  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| ||||||| ||||||||||||| |||||||||||| |||| |||| | ||||||||||||| ||||||||    
T  30825048 aattccaacatctgcatatatttggaaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaa 30824962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 13 - 199
Target Start/End: Complemental strand, 37591030 - 37590844
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||| | | |||||||||||| ||||||||||||||||||| |||||||| | |||||||||    
T  37591030 aatataacattgacatataattttaacaaaagaatgaagtaagacatgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 37590931  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||  ||||| ||||| ||||||||||||||| ||| | |||||||||||| |||| |||| |  |||||||||||||||||||||    
T  37590930 aatttcaacatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgattttgtctactacatctacaa 37590844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 13 - 190
Target Start/End: Complemental strand, 52098417 - 52098239
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaat-aatatttttaaggtgaattagtgtggtatatgaggttc 111  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | |||||||||||||||||| ||||| || | ||| |||     
T  52098417 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaatttaatatttttaaggtgaataagtgttgtgtctgaagttt 52098318  T
Q  112 gaattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctacta 190  Q
    |||||| ||||| ||||| ||||||||||||||||||||| |||||||||||| |||| |||| |||||||||||||||    
T  52098317 gaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttatttttgtctacta 52098239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 13 - 199
Target Start/End: Complemental strand, 53143488 - 53143302
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||  ||||||| || ||||| | |||||||||    
T  53143488 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 53143389  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| ||||||||||||||||||||| |||||||||||| |||| |||| | |||||||||| || ||||||||    
T  53143388 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaa 53143302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 13 - 199
Target Start/End: Original strand, 54624960 - 54625139
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    |||||||||||||||||||||||||||||| ||||||||||||||      |||||||| ||||||||||||||||||| |||||||| | |||||||||    
T  54624960 aatataacattgacatataattttaacaaa-gaatgaagtaacat------gataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 54625052  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| ||||||||||||||||||||| |||||||||||| ||||||||| | |||||||||||||| |||||||    
T  54625053 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattaagatttgtttttgtctactacgtctacaa 54625139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 13 - 199
Target Start/End: Complemental strand, 31966195 - 31966009
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||  ||||||| || ||||| | |||||||||    
T  31966195 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 31966096  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| ||||||||||||||||||||| |||||||||||| |||| |||| ||||| ||| || || ||||||||    
T  31966095 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttatttatgtataataaatctacaa 31966009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 13 - 199
Target Start/End: Original strand, 37651669 - 37651855
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||  ||||||| || ||||| | |||||||||    
T  37651669 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtttgaggttcg 37651768  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| |||||| |||||||||||||| ||||||| |||| |||| |||| | ||||||||||||| ||||||||    
T  37651769 aattccaacatctgcatatatttgagaccacatatttcattctctttcatatgcattgagatttgtttttgtctactatatctacaa 37651855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 13 - 199
Target Start/End: Original strand, 41387129 - 41387315
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||| ||||||||||||||||||| |||||||| | |||||||||    
T  41387129 aatataacattgacatataattttaacaaaagaatgaagtaagacacgatcgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 41387228  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||  | ||| ||||| ||||||||||||||| ||| | |||||||||||| |||| |||| | ||||||||||||| ||||||||    
T  41387229 aatttcagcatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgtttttgtctactatatctacaa 41387315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 17 - 199
Target Start/End: Complemental strand, 47143022 - 47142840
Alignment:
Q  17 taacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcgaatt 116  Q
    ||||||||| |||||||||||||||||||||||||||||| || || |||||||| ||||||||||||||||||| ||  |||| | |||||||||||||    
T  47143022 taacattgagatataattttaacaaaagaatgaagtaacacacaatcgataaaaattaatatttttaaggtgaataagcatggtgtctgaggttcgaatt 47142923  T
Q  117 ctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||||| ||||| |||||| |||||||||| ||| |||||||||||| |||| |||| | ||||||||||||||||||||||    
T  47142922 ctaacatctgcatatatttgagaccacatatgtcattctctttgatatgcattgagatttgtttttgtctactacatctacaa 47142840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 13 - 199
Target Start/End: Complemental strand, 12090686 - 12090499
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaa-tgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttc 111  Q
    ||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||| ||||||||||  | ||||| || ||||| | ||||||||    
T  12090686 aatataatattgacatataattttaacaaaagaaatgaagtaacacacgattgataaaaattaatattttttggttgaataagcgtggtgtctgaggttc 12090587  T
Q  112 gaattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    |||||| ||||| | ||| ||||||||||||||||||||| |||||||||||| |||| |||| | ||||||||||||| ||||||||    
T  12090586 gaattccaacatctacatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaa 12090499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 13 - 174
Target Start/End: Complemental strand, 50229933 - 50229771
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaat-aatatttttaaggtgaattagtgtggtatatgaggttc 111  Q
    |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||||| ||| |||| | ||||||||    
T  50229933 aatataacattgacatataattttaacaaaagaatgaagtaacacactattgataaaaaattaatatttttaaggtgaataagtatggtgtctgaggttc 50229834  T
Q  112 gaattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagat 174  Q
    |||||| ||||| ||||| ||||| ||||||||| ||||| |||||||||||| |||| ||||    
T  50229833 gaattccaacatctgcatatattttggaccacatgtttcattctctttgatatgcattgagat 50229771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 12090773 - 12090729
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  12090773 aatataacattaacatataatttttacaaaagaatgaagtaacat 12090729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 16905261 - 16905217
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  16905261 aatataacattaacatataatttttacaaaagaatgaagtaacat 16905217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 16918201 - 16918157
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  16918201 aatataacattaacatataatttttacaaaagaatgaagtaacat 16918157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 30825235 - 30825191
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  30825235 aatataacattaacatataatttttacaaaagaatgaagtaacat 30825191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 31966282 - 31966238
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  31966282 aatataacattaacatataatttttacaaaagaatgaagtaacat 31966238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 39058665 - 39058621
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  39058665 aatataacattaacatataatttttacaaaagaatgaagtaacat 39058621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 45977307 - 45977263
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  45977307 aatataacattaacatataatttttacaaaagaatgaagtaacat 45977263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 47143113 - 47143069
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  47143113 aatataacattaacatataatttttacaaaagaatgaagtaacat 47143069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 48118845 - 48118801
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  48118845 aatataacattaacatataatttttacaaaagaatgaagtaacat 48118801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 52098503 - 52098459
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  52098503 aatataacattaacatataatttttacaaaagaatgaagtaacat 52098459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 52434540 - 52434584
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  52434540 aatataacattaacatataatttttacaaaagaatgaagtaacat 52434584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 53143577 - 53143533
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  53143577 aatataacattaacatataatttttacaaaagaatgaagtaacat 53143533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 54624879 - 54624923
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  54624879 aatataacattaacatataatttttacaaaagaatgaagtaacat 54624923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 145 - 199
Target Start/End: Complemental strand, 50229766 - 50229712
Alignment:
Q  145 tatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||||| |||||||||||| |||| |||| | ||||||||||||||||||||||    
T  50229766 tatttcattctctttgatatgcattgagatttttttttgtctactacatctacaa 50229712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 41387042 - 41387086
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| |||||| |||||||||||||    
T  41387042 aatataacattaacatataatttttacaaaataatgaagtaacat 41387086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 44376390 - 44376346
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| |||||| |||||||||||||    
T  44376390 aatataacattaacatataatttttacaaaataatgaagtaacat 44376346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 50230019 - 50229979
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagta 53  Q
    ||||||||||| |||||||||||| ||||||||||||||||    
T  50230019 aatataacattaacatataatttttacaaaagaatgaagta 50229979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 31628764 - 31628718
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatac 59  Q
    |||||| |||| |||||||||||| |||||||||| |||||||||||    
T  31628764 aatatagcattaacatataatttttacaaaagaattaagtaacatac 31628718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 57
Target Start/End: Complemental strand, 45782734 - 45782696
Alignment:
Q  19 acattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||| |||||||||||| ||||||||||||||||||||    
T  45782734 acattaacatataatttttacaaaagaatgaagtaacat 45782696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 37591113 - 37591069
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||| ||||||| |||||| |||||||||||||    
T  37591113 aatataacattaacatgtaatttttacaaaataatgaagtaacat 37591069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 46255954 - 46255998
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||| ||||| |||||||||||| |||||| |||||||||||||    
T  46255954 aatatgacattaacatataatttttacaaaataatgaagtaacat 46255998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173 (Bit Score: 119; Significance: 7e-61; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 13 - 199
Target Start/End: Original strand, 19350 - 19536
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| ||||||||||||||||||| |||||||| | |||||||||    
T  19350 aatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 19449  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| ||||||||||||||||||| | | ||||| |||| |||| |||| | ||||||||||||||||||||||    
T  19450 aattccaacatctgcatatatttgggaccacatatttaattatctttaatatgcattgagatttgtttttgtctactacatctacaa 19536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 119; Significance: 7e-61; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 13 - 199
Target Start/End: Complemental strand, 149276 - 149090
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||| || | ||| |||||    
T  149276 aatataacgttgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgttgtgtttgatgttcg 149177  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| ||||||||||||||||||||| |||||||||||| |||| |||| | ||||||||||||| ||||||||    
T  149176 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaa 149090  T

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Target: scaffold0022; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 149361 - 149317
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacat 57  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  149361 aatataacattaacatataatttttacaaaagaatgaagtaacat 149317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 13 - 199
Target Start/End: Original strand, 46277 - 46463
Alignment:
Q  13 aatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaaataatatttttaaggtgaattagtgtggtatatgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||  ||||||| || ||||| | |||||||||    
T  46277 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 46376  T
Q  113 aattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtctactacatctacaa 199  Q
    ||||| ||||| ||||| ||||||||||||||||||||| |||||||||||| |||| |||| | ||||||||||||| ||||||||    
T  46377 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaa 46463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 68 - 199
Target Start/End: Complemental strand, 6232 - 6101
Alignment:
Q  68 aaaaataatatttttaaggtgaattagtgtggtatatgaggttcgaattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatataca 167  Q
    |||| ||||||||||||| ||||| |||||||| | |||||||||||||| ||||| ||||| |||||| |||||||||||||| |||||||||||| ||    
T  6232 aaaattaatatttttaagatgaataagtgtggtgtttgaggttcgaattccaacatctgcatatatttgagaccacatatttcattctctttgatatgca 6133  T
Q  168 ttaagatgtatttttgtctactacatctacaa 199  Q
    || |||| | ||||||||||| ||||||||||    
T  6132 ttgagatatgtttttgtctacaacatctacaa 6101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 68 - 199
Target Start/End: Complemental strand, 6242 - 6111
Alignment:
Q  68 aaaaataatatttttaaggtgaattagtgtggtatatgaggttcgaattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatataca 167  Q
    |||| ||||||||||||| ||||| |||||||| | |||||||||||||| ||||| ||||| |||||| |||||||||||||| |||||||||||| ||    
T  6242 aaaattaatatttttaagatgaataagtgtggtgtttgaggttcgaattccaacatctgcatatatttgagaccacatatttcattctctttgatatgca 6143  T
Q  168 ttaagatgtatttttgtctactacatctacaa 199  Q
    || |||| | ||||||||||| ||||||||||    
T  6142 ttgagatatgtttttgtctacaacatctacaa 6111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0836 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0836
Description:

Target: scaffold0836; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 87 - 199
Target Start/End: Complemental strand, 5430 - 5318
Alignment:
Q  87 tgaattagtgtggtatatgaggttcgaattctaacatgtgcatgtatttgggaccacatatttcaatctctttgatatacattaagatgtatttttgtct 186  Q
    ||||| || ||||| | |||||||||||||| ||||| ||||| ||||||||||||||||||||| |||||||||||| |||| |||| | |||||||||    
T  5430 tgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtct 5331  T
Q  187 actacatctacaa 199  Q
    | || ||||||||    
T  5330 attatatctacaa 5318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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