View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5255_low_48 (Length: 250)
Name: NF5255_low_48
Description: NF5255
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5255_low_48 |
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Alignment Details
Target: chr6 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 34880449 - 34880682
Alignment:
| Q |
1 |
tattttaaagcatactatttggtttgttaataaataatagctgatctttgtcaaaatattttgttattacaaaaagggaaatgccaattaataagaatag |
100 |
Q |
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| T |
34880449 |
tattttaaagcatactatttggtttgttaataaataatagctgatctttgtcaaaatattttgttattacaaaaagggaaatgccaattaataagaatag |
34880548 |
T |
|
| Q |
101 |
aagtctcagaaaaactgcacatatatcaatatcatgcgacacattatcatcacaagtttccctccatgatcagttattgattcaagtattacaacaacat |
200 |
Q |
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||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| |||| |
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| T |
34880549 |
aagtctcagaacaactgcacatatatcaatatcatgtgacacattatcatcacaagtttccctccatgatcagctatcgattcaagtattacaacgacat |
34880648 |
T |
|
| Q |
201 |
gaatgtatcacaaatggttagttttgttggtgct |
234 |
Q |
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|||||||||||||||||||||||||||||||||| |
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| T |
34880649 |
gaatgtatcacaaatggttagttttgttggtgct |
34880682 |
T |
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