View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5255_low_53 (Length: 237)
Name: NF5255_low_53
Description: NF5255
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5255_low_53 |
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Alignment Details
Target: chr2 (Bit Score: 169; Significance: 9e-91; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 15 - 219
Target Start/End: Original strand, 11100694 - 11100896
Alignment:
| Q |
15 |
cacagaaacgtgcacataacttggtgtatatgcgtatattagttaatgtgaaacttttctacactaagatcttctaaaacttggtgtatattttctcatc |
114 |
Q |
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| T |
11100694 |
cacagaaacgtgcacataacttggtgtatatgcgtatattagttaatgtgaaacttttctacactaagatcttctaaaacttggtgtatattttctcatc |
11100793 |
T |
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| Q |
115 |
atannnnnnnnngcttttgagtgaagaattctaacaaacaagcttaattttgttcaaaaataacctactctctccaactacacgctaaattatattttat |
214 |
Q |
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| T |
11100794 |
ata--tttttttgtttttgagtgaagaattctaacaaacaagcttaattttgttcaaaaataacctactctctccaactacacgctaaattatattttat |
11100891 |
T |
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| Q |
215 |
aaatg |
219 |
Q |
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||||| |
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| T |
11100892 |
aaatg |
11100896 |
T |
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