View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF5255_low_7 (Length: 459)
Name: NF5255_low_7
Description: NF5255
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5255_low_7 |
 | |
|
Alignment Details
Target: chr5 (Bit Score: 383; Significance: 0; HSPs: 27)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 383; E-Value: 0
Query Start/End: Original strand, 11 - 441
Target Start/End: Complemental strand, 30060625 - 30060195
Alignment:
| Q |
11 |
agatgtcggcatcatggtttgggatgaattgtaccaaaaatcattctttcaagatataaaaatggatgaattttctggcgacatttcattcaagatgcat |
110 |
Q |
| |
|
|||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30060625 |
agatgttggcatcatggtgtgggatgaattgtaccaaaaatcattctttcaagatagaaaaatggatgaattttctggcgacatttcattcaagatgcat |
30060526 |
T |
|
| Q |
111 |
gatcttgtccatgatcttgctcaatcagtaatggggcaagaatgtatgtatttggagaatgcaaacttgactagtttgtcaaaaagcacacaccacatta |
210 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30060525 |
gaccttgtccatgatcttgctcaatcagtaatggggcaagaatgtatgtatttggagaatgcaaacttgactagtttgtcaaaaagcacacaccacatta |
30060426 |
T |
|
| Q |
211 |
gttttgacaataaagactcgttatccttcgacaaggatgctttcaaaatagttgaatccttgcgaacatggtttgagttttgtagaactttgtcaaaaga |
310 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| |
|
|
| T |
30060425 |
gttttgacaataaagactcgttatccttcgacaaggatgctttcaaaatagttgaatccttgcgaacatggtttgagttttgtagtactttttcaaaaga |
30060326 |
T |
|
| Q |
311 |
aaaacatgattacttcccaacaaacctttctcttcgggttttatgcataacctttatccgagagccattactaggtagtttaattcatttaaggtatttg |
410 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30060325 |
aaaacatgattacttcccaacaaacctttctcttcgggttttatgcataacctttatccgagagccattactaggtagtttaattcatttaaggtatttg |
30060226 |
T |
|
| Q |
411 |
gaaatttgttatcttaacatagaaaagttgc |
441 |
Q |
| |
|
||| || ||| |||| | ||| ||||||||| |
|
|
| T |
30060225 |
gaacttcgttctcttgatataaaaaagttgc |
30060195 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 332; E-Value: 0
Query Start/End: Original strand, 11 - 441
Target Start/End: Complemental strand, 30749899 - 30749469
Alignment:
| Q |
11 |
agatgtcggcatcatggtttgggatgaattgtaccaaaaatcattctttcaagatataaaaatggatgaattttctggcgacatttcattcaagatgcat |
110 |
Q |
| |
|
|||||| |||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
30749899 |
agatgttggcatcatggtttgggatgaattgtatcaaaaatcattctttcaagatagaaaaatggatgaattttctggcgacatttcattcaagattcat |
30749800 |
T |
|
| Q |
111 |
gatcttgtccatgatcttgctcaatcagtaatggggcaagaatgtatgtatttggagaatgcaaacttgactagtttgtcaaaaagcacacaccacatta |
210 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| |
|
|
| T |
30749799 |
gatcttgtccatgatcttgctcaatcagtaatggggcaagaatgtatgtatttggagaatgcaaacttgactagtttgtcgaaaagcacacaccatatta |
30749700 |
T |
|
| Q |
211 |
gttttgacaataaagactcgttatccttcgacaaggatgctttcaaaatagttgaatccttgcgaacatggtttgagttttgtagaactttgtcaaaaga |
310 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | |||||||||||| |
|
|
| T |
30749699 |
gttttgacaataacgactcgttatccttcgacaaggatgctttcaaaatagttgaatccttgcgaacatggtttgagttgtgtagtattttgtcaaaaga |
30749600 |
T |
|
| Q |
311 |
aaaacatgattacttcccaacaaacctttctcttcgggttttatgcataacctttatccgaga-gccattactaggtagtttaattcatttaaggtattt |
409 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||| ||| ||||| |||||| ||||||||||||||||||||||| |
|
|
| T |
30749599 |
aaaacatgattacttcccaacaaacctttctcttcgggttttacgcacatcctttatcc-agatgccatcactagggagtttaattcatttaaggtattt |
30749501 |
T |
|
| Q |
410 |
ggaaatttgttatcttaacatagaaaagttgc |
441 |
Q |
| |
|
|||| || ||| |||| | ||| ||||||||| |
|
|
| T |
30749500 |
ggaacttcgttctcttgatataaaaaagttgc |
30749469 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 11 - 441
Target Start/End: Complemental strand, 30400330 - 30399903
Alignment:
| Q |
11 |
agatgtcggcatcatggtttgggatgaattgtaccaaaaatcattctttcaagatataaaaatggatgaattttctggcgacatttcattcaagatgcat |
110 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
30400330 |
agatgttggcatcatggtttgggatgaattgtaccaaaaatcattctttcaagacaaaaaaatggatgaattttctggcaacatttcattcaagatgcat |
30400231 |
T |
|
| Q |
111 |
gatcttgtccatgatcttgctcaatcagtaatggggcaagaatgtatgtatttggagaatgcaaacttgactagtttgtcaaaaagcacacaccacatta |
210 |
Q |
| |
|
||||||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| | |
|
|
| T |
30400230 |
gatcttgtccatgatctcgctaagtcagtaatggggcaagaatgtatatatttggagaatgcaaacatgactagtttgtcaaaaagcacacaccacataa |
30400131 |
T |
|
| Q |
211 |
gttttgacaataaagactcgttatccttcgacaaggatgctttcaaaatagttgaatccttgcgaacatggtttgagttttgtagaactttgtcaaaaga |
310 |
Q |
| |
|
||||| || | | | | |||||| ||||| ||| ||| |||| || |||||||||||||||||||||||||||||||| | ||||| ||||||| |
|
|
| T |
30400130 |
gttttaactctgataatttgttatcattcgatgagggtgccttcagaaaagttgaatccttgcgaacatggtttgagttttct---acttttccaaaaga |
30400034 |
T |
|
| Q |
311 |
aaaacatgattacttcccaacaaacctttctcttcgggttttatgcataacctttatccgagagccattactaggtagtttaattcatttaaggtatttg |
410 |
Q |
| |
|
| |||| ||||||||||||||| ||| |||||||||||||||||||| |||||||||||| | ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30400033 |
agaacaggattacttcccaacagacccttctcttcgggttttatgcacaacctttatccgggggccattactaggtagtttaattcatttaaggtatttg |
30399934 |
T |
|
| Q |
411 |
gaaatttgttatcttaacatagaaaagttgc |
441 |
Q |
| |
|
|| || ||||||| ||||| || |||||| |
|
|
| T |
30399933 |
gagcttctttatcttgacatacaagagttgc |
30399903 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 23 - 430
Target Start/End: Original strand, 30242234 - 30242638
Alignment:
| Q |
23 |
catggtttgggatgaattgtaccaaaaatcattctttcaagatataaaaatggatgaattttctggcgacatttcattcaagatgcatgatcttgtccat |
122 |
Q |
| |
|
|||||||||| | |||||||||||||||||||| |||||||| | ||||||||||||| |||||| |||||||| |||||||||||||||||||||||| |
|
|
| T |
30242234 |
catggtttggaaggaattgtaccaaaaatcattttttcaagacagcaaaatggatgaatattctggagacatttctttcaagatgcatgatcttgtccat |
30242333 |
T |
|
| Q |
123 |
gatcttgctcaatcagtaatggggcaagaatgtatgtatttggagaatgcaaacttgactagtttgtcaaaaagcacacaccacattagttttgacaata |
222 |
Q |
| |
|
||||| ||||||||||||||||||| ||||||||||||||||||||| |||| |||| ||||||||||||||||||||||||||| |||||||| | | |
|
|
| T |
30242334 |
gatctcgctcaatcagtaatggggccagaatgtatgtatttggagaacaaaaacatgaccagtttgtcaaaaagcacacaccacattggttttgactaca |
30242433 |
T |
|
| Q |
223 |
aagactcgttatccttcgacaaggatgctttcaaaatagttgaatccttgcgaacatggtttgagttttgtagaactttgtcaaaagaaaaacatgatta |
322 |
Q |
| |
|
|||||| ||||||||| || ||| |||||||||||| ||||||||||||| |||||| |||| |||| || | | || ||||| ||||||||||| | |
|
|
| T |
30242434 |
aagacttgttatcctttgataagaatgctttcaaaaaagttgaatccttgagaacattgtttcagttgagt--tattatgccaaaa-aaaaacatgataa |
30242530 |
T |
|
| Q |
323 |
cttcccaacaaacctttctcttcgggttttatgcataacctttatccgagagccattactaggtagtttaattcatttaaggtatttggaaatttgttat |
422 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||| | |||||||||| ||||| |||||| ||||||||||||||||||||||||||| || ||| | |
|
|
| T |
30242531 |
cttcccaacatacctttctcttcgggttttatgcacatcctttatccggatgccatcactagggagtttaattcatttaaggtatttggaacttcgttct |
30242630 |
T |
|
| Q |
423 |
cttaacat |
430 |
Q |
| |
|
||| |||| |
|
|
| T |
30242631 |
cttgacat |
30242638 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 26 - 431
Target Start/End: Original strand, 30677033 - 30677435
Alignment:
| Q |
26 |
ggtttgggatgaattgtaccaaaaatcattctttcaagatataaaaatggatgaattttctggcgacatttcattcaagatgcatgatcttgtccatgat |
125 |
Q |
| |
|
||||||| | ||||||||||||||||||||||||||||||| ||| |||||||||| |||||| |||||||| || |||||||||||||||||||||||| |
|
|
| T |
30677033 |
ggtttggaaggaattgtaccaaaaatcattctttcaagatagaaagatggatgaatattctggagacatttcttttaagatgcatgatcttgtccatgat |
30677132 |
T |
|
| Q |
126 |
cttgctcaatcagtaatggggcaagaatgtatgtatttggagaatgcaaacttgactagtttgtcaaaaagcacacaccacattagttttgacaataaag |
225 |
Q |
| |
|
|| ||||||| ||||||||||| ||||||||||||||||||||| |||| |||| ||||||||||||||||||||||||||| |||||||| |||| |
|
|
| T |
30677133 |
ctcgctcaattagtaatggggccagaatgtatgtatttggagaaaaaaaacatgaccagtttgtcaaaaagcacacaccacattggttttgacctcaaag |
30677232 |
T |
|
| Q |
226 |
actcgttatccttcgacaaggatgctttcaaaatagttgaatccttgcgaacatggtttgagttttgtagaactttgtcaaaagaaaaacatgattactt |
325 |
Q |
| |
|
||| ||||||||| || ||| |||||||||||| ||||||||||||| |||||| |||| |||| || || || ||| |||||||||||| ||| |
|
|
| T |
30677233 |
acttgttatcctttgataagaatgctttcaaaaaagttgaatccttgagaacattgtttcagtt---gagttattattccaaaaaaaaacatgatttctt |
30677329 |
T |
|
| Q |
326 |
cccaacaaacctttctcttcgggttttatgcataacctttatccgagagccattactaggtagtttaattcatttaaggtatttggaaatttgttatctt |
425 |
Q |
| |
|
||||||| |||||||||||||||||||||||| | |||||||||| ||||| |||||| ||||||||||||||||||||||||||| || ||| |||| |
|
|
| T |
30677330 |
cccaacatacctttctcttcgggttttatgcacatcctttatccggatgccatcactagggagtttaattcatttaaggtatttggaacttcgttctctt |
30677429 |
T |
|
| Q |
426 |
aacata |
431 |
Q |
| |
|
||||| |
|
|
| T |
30677430 |
gacata |
30677435 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 11 - 413
Target Start/End: Complemental strand, 30206778 - 30206379
Alignment:
| Q |
11 |
agatgtcggcatcatggtttgggatgaattgtaccaaaaatcattctttcaagatataaaaatggatgaattttctggcgacatttcattcaagatgcat |
110 |
Q |
| |
|
|||||| |||| |||||||||| ||||||||| ||||||||| ||||||||||| || || ||||| | |||||| |||||||| |||||||||||| |
|
|
| T |
30206778 |
agatgttggcagcatggtttggaatgaattgtgccaaaaatctttctttcaagacatcaagatggacaacggttctggagacatttctttcaagatgcat |
30206679 |
T |
|
| Q |
111 |
gatcttgtccatgatcttgctcaatcagtaatggggcaagaatgtatgtatttggagaatgcaaacttgactagtttgtcaaaaagcacacaccacatta |
210 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| |||||| |||||||||||||||||||||||| | |
|
|
| T |
30206678 |
gatcttgtccatgatcttgctcaatcagtaatgggtcaagaatgtatgtatttggagaattcaaacatgactactttgtcaaaaagcacacaccacataa |
30206579 |
T |
|
| Q |
211 |
gttttgacaataaagactcgttatccttcgacaaggatgctttcaaaatagttgaatccttgcgaacatggtttgagttttgtagaactttgtcaaaaga |
310 |
Q |
| |
|
||||| || || | ||| |||||| |||||| ||| ||| |||| | ||||||||||||| |||||| |||| || ||| | | || | ||| |
|
|
| T |
30206578 |
gttttcactatgatgacgtgttatcattcgacgagggtgccttcaggaaagttgaatccttgagaacattgtttcag--ttgaatca-ttacaccaaaac |
30206482 |
T |
|
| Q |
311 |
aaaacatgattacttcccaacaaacctttctcttcgggttttatgcataacctttatccgagagccattactaggtagtttaattcatttaaggtatttg |
410 |
Q |
| |
|
|||||||||||||| |||||||||| ||| |||||||||||||||| | ||||||||| | |||| |||||| |||||||||||||||||||||||| |
|
|
| T |
30206481 |
aaaacatgattactcgccaacaaaccgttcccttcgggttttatgcacatcctttatccaggtaccatcactagggagtttaattcatttaaggtatttg |
30206382 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 23 - 286
Target Start/End: Original strand, 30338384 - 30338647
Alignment:
| Q |
23 |
catggtttgggatgaattgtaccaaaaatcattctttcaagatataaaaatggatgaattttctggcgacatttcattcaagatgcatgatcttgtccat |
122 |
Q |
| |
|
|||||||||| | ||||||||| ||||||| ||||||||||||| || |||||||||| |||||| |||||||| |||||||||||||||||||||||| |
|
|
| T |
30338384 |
catggtttggaaggaattgtacaaaaaatcgttctttcaagatagcaagatggatgaatattctggagacatttctttcaagatgcatgatcttgtccat |
30338483 |
T |
|
| Q |
123 |
gatcttgctcaatcagtaatggggcaagaatgtatgtatttggagaatgcaaacttgactagtttgtcaaaaagcacacaccacattagttttgacaata |
222 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||| |||||||||| |||| ||||| ||||||||||||||||||||||||| ||||||||| | |
|
|
| T |
30338484 |
gatctcgctcaatcagtaatggggcaagaatgtatgtgtttggagaataaaaacacgactaatttgtcaaaaagcacacaccacattggttttgacagca |
30338583 |
T |
|
| Q |
223 |
aagactcgttatccttcgacaaggatgctttcaaaatagttgaatccttgcgaacatggtttga |
286 |
Q |
| |
|
| ||| ||||||||||| | |||||||||||| |||||||||||||||||| | |||||| |
|
|
| T |
30338584 |
acaactttttatccttcgatgaaaatgctttcaaaaaagttgaatccttgcgaactttgtttga |
30338647 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 23 - 441
Target Start/End: Complemental strand, 29872418 - 29872012
Alignment:
| Q |
23 |
catggtttgggatgaattgtaccaaaaatcattctttcaagatataaaaatggatgaattttctggcgacatttcattcaagatgcatgatcttgtccat |
122 |
Q |
| |
|
|||||||||| | |||||||||||||||||||||||||||||| || |||||||||| |||||| |||||||| |||||||||||||||||||||||| |
|
|
| T |
29872418 |
catggtttggaaggaattgtaccaaaaatcattctttcaagatggcaagatggatgaatattctggagacatttctttcaagatgcatgatcttgtccat |
29872319 |
T |
|
| Q |
123 |
gatcttgctcaatcagtaatggggcaagaatgtatgtatttggagaatgcaaacttgactagtttgtcaaaaagcacacaccacattagttttgacaata |
222 |
Q |
| |
|
||||| ||||||||| |||||||||||||||||||| |||||||||| |||| |||| ||||||||||||||||||||||||||| | ||||| | | |
|
|
| T |
29872318 |
gatctcgctcaatcaataatggggcaagaatgtatgcatttggagaacaaaaacatgaccagtttgtcaaaaagcacacaccacattgttgttgactaca |
29872219 |
T |
|
| Q |
223 |
aagactcgttatccttcgacaaggatgctttcaaaatagttgaatccttgcgaacatggtttgagttttgtagaactttgtcaaaagaaaaacatgatta |
322 |
Q |
| |
|
||| ||||||||| || | |||||||||||| ||||||||||||| |||||| | ||||||| | || |||| ||||||||||| | |
|
|
| T |
29872218 |
aag---tgttatcctttgatgaaaatgctttcaaaaaagttgaatccttgagaacattg-ttgagtt------attcttaccaaa--aaaaacatgataa |
29872131 |
T |
|
| Q |
323 |
cttcccaacaaacctttctcttcgggttttatgcataacctttatccgagagccattactaggtagtttaattcatttaaggtatttggaaatttgttat |
422 |
Q |
| |
|
||||||| || | |||||||| |||||||||||| | |||||||||| ||||| ||| || ||||||||||||||||||||||||| | || ||| | |
|
|
| T |
29872130 |
cttcccagcatatctttctctccgggttttatgcgcatcctttatccggatgccatcactggggagtttaattcatttaaggtatttgggacttcgtttt |
29872031 |
T |
|
| Q |
423 |
cttaacatagaaaagttgc |
441 |
Q |
| |
|
||| ||||| ||||||||| |
|
|
| T |
29872030 |
cttgacataaaaaagttgc |
29872012 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 24 - 286
Target Start/End: Complemental strand, 30436059 - 30435797
Alignment:
| Q |
24 |
atggtttgggatgaattgtaccaaaaatcattctttcaagatataaaaatggatgaattttctggcgacatttcattcaagatgcatgatcttgtccatg |
123 |
Q |
| |
|
||||||||| | ||||||||||||||||||||||||||||||| || |||||||||| || ||| |||||||| ||||||||||||||||||||||||| |
|
|
| T |
30436059 |
atggtttggaaggaattgtaccaaaaatcattctttcaagatagcaagatggatgaatattttggagacatttctttcaagatgcatgatcttgtccatg |
30435960 |
T |
|
| Q |
124 |
atcttgctcaatcagtaatggggcaagaatgtatgtatttggagaatgcaaacttgactagtttgtcaaaaagcacacaccacattagttttgacaataa |
223 |
Q |
| |
|
|||| ||||||||||||| |||| ||||||||||||||||||||||||||||| |||||| |||| |||||| |||||||||||| |||||| || | | |
|
|
| T |
30435959 |
atctcgctcaatcagtaacggggaaagaatgtatgtatttggagaatgcaaacatgactaatttgacaaaaaacacacaccacataagttttaactctga |
30435860 |
T |
|
| Q |
224 |
agactcgttatccttcgacaaggatgctttcaaaatagttgaatccttgcgaacatggtttga |
286 |
Q |
| |
|
| | | |||||| ||||| ||| ||| ||||||| |||||||||||| ||||||| |||||| |
|
|
| T |
30435859 |
aaatttgttatcattcgatgagggtgccttcaaaaaagttgaatccttacgaacattgtttga |
30435797 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 24 - 215
Target Start/End: Complemental strand, 29853554 - 29853363
Alignment:
| Q |
24 |
atggtttgggatgaattgtaccaaaaatcattctttcaagatataaaaatggatgaattttctggcgacatttcattcaagatgcatgatcttgtccatg |
123 |
Q |
| |
|
||||||||| | |||||||||||||| ||||||||||||||||| || |||||||||| ||||| ||||||| ||||||||||||||||||||||||| |
|
|
| T |
29853554 |
atggtttggaaggaattgtaccaaaagtcattctttcaagatatcaagatggatgaatactctggagacatttttttcaagatgcatgatcttgtccatg |
29853455 |
T |
|
| Q |
124 |
atcttgctcaatcagtaatggggcaagaatgtatgtatttggagaatgcaaacttgactagtttgtcaaaaagcacacaccacattagtttt |
215 |
Q |
| |
|
|||| ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||| |
|
|
| T |
29853454 |
atctcgctcaatcagtaatggggcaagaatgtgtgtatttggagaatgcaaacatgactagtttgacaaaaagcacacaccacataagtttt |
29853363 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 23 - 286
Target Start/End: Complemental strand, 30483648 - 30483385
Alignment:
| Q |
23 |
catggtttgggatgaattgtaccaaaaatcattctttcaagatataaaaatggatgaattttctggcgacatttcattcaagatgcatgatcttgtccat |
122 |
Q |
| |
|
|||||||||| | ||||||||| |||||| ||||||||||||| || |||||||||| |||||| |||||||| |||||||||||||||||||||||| |
|
|
| T |
30483648 |
catggtttggaaggaattgtacagaaaatcgttctttcaagatagcaagatggatgaatattctggagacatttctttcaagatgcatgatcttgtccat |
30483549 |
T |
|
| Q |
123 |
gatcttgctcaatcagtaatggggcaagaatgtatgtatttggagaatgcaaacttgactagtttgtcaaaaagcacacaccacattagttttgacaata |
222 |
Q |
| |
|
||||| |||||||||||||||||||||||||||| || |||||||||| |||| ||||| ||||||||||||||||||||||||| ||||| ||| | |
|
|
| T |
30483548 |
gatctcgctcaatcagtaatggggcaagaatgtacgtgtttggagaataaaaacacgactaatttgtcaaaaagcacacaccacattggttttaacagca |
30483449 |
T |
|
| Q |
223 |
aagactcgttatccttcgacaaggatgctttcaaaatagttgaatccttgcgaacatggtttga |
286 |
Q |
| |
|
| | | ||||||||||| | |||||||||||| |||||||||||||||||||| |||||| |
|
|
| T |
30483448 |
agaaatttttatccttcgatgaaaatgctttcaaaaaagttgaatccttgcgaacattgtttga |
30483385 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 23 - 286
Target Start/End: Original strand, 30713287 - 30713550
Alignment:
| Q |
23 |
catggtttgggatgaattgtaccaaaaatcattctttcaagatataaaaatggatgaattttctggcgacatttcattcaagatgcatgatcttgtccat |
122 |
Q |
| |
|
|||||||||| | ||||||||||||||||||||||| |||||| || |||||||||| |||||| ||||||| || || |||||||||||||||||| |
|
|
| T |
30713287 |
catggtttggaaggaattgtaccaaaaatcattcttccaagattgcaagatggatgaatattctggaaacatttcttttaaaatgcatgatcttgtccat |
30713386 |
T |
|
| Q |
123 |
gatcttgctcaatcagtaatggggcaagaatgtatgtatttggagaatgcaaacttgactagtttgtcaaaaagcacacaccacattagttttgacaata |
222 |
Q |
| |
|
||||| ||||||||||||| |||| |||||||| |||||||||||||||||||| |||||| |||| |||||| |||||||||||| |||||| || | |
|
|
| T |
30713387 |
gatctcgctcaatcagtaacggggaaagaatgtgtgtatttggagaatgcaaacatgactaatttgacaaaaaacacacaccacataagttttcactctg |
30713486 |
T |
|
| Q |
223 |
aagactcgttatccttcgacaaggatgctttcaaaatagttgaatccttgcgaacatggtttga |
286 |
Q |
| |
|
|| | | |||||| ||||| ||| ||| ||||||| |||||||||||| ||||||| |||||| |
|
|
| T |
30713487 |
aaaaattgttatcattcgatgagggtgccttcaaaaaagttgaatccttacgaacattgtttga |
30713550 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 23 - 279
Target Start/End: Original strand, 30330993 - 30331249
Alignment:
| Q |
23 |
catggtttgggatgaattgtaccaaaaatcattctttcaagatataaaaatggatgaattttctggcgacatttcattcaagatgcatgatcttgtccat |
122 |
Q |
| |
|
||||| |||| ||| ||||| ||||||| |||||||| |||| || || || |||||| |||| |||||||| || |||| || ||||||| || || |
|
|
| T |
30330993 |
catggcttggaatggattgtgccaaaaaccattctttgaagacatcaagatctatgaatattctaaagacatttctttaaagacgcgtgatcttttcaat |
30331092 |
T |
|
| Q |
123 |
gatcttgctcaatcagtaatggggcaagaatgtatgtatttggagaatgcaaacttgactagtttgtcaaaaagcacacaccacattagttttgacaata |
222 |
Q |
| |
|
||||||||||||||| || ||| |||| ||| ||||||| |||||||||||||| ||||||||||| |||||||||| || ||||| ||||||||| | |
|
|
| T |
30331093 |
gatcttgctcaatcaatactggagcaacaatatatgtatctggagaatgcaaacatgactagtttgacaaaaagcacccatcacataagttttgactcca |
30331192 |
T |
|
| Q |
223 |
aagactcgttatccttcgacaaggatgctttcaaaatagttgaatccttgcgaacat |
279 |
Q |
| |
|
| | | |||||| |||| | | ||| ||||||| |||||||||||||||||||| |
|
|
| T |
30331193 |
ataatttgttatcaatcgatgacggtgccttcaaaaaagttgaatccttgcgaacat |
30331249 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 148 - 289
Target Start/End: Original strand, 17418150 - 17418291
Alignment:
| Q |
148 |
aagaatgtatgtatttggagaatgcaaacttgactagtttgtcaaaaagcacacaccacattagttttgacaataaagactcgttatccttcgacaagga |
247 |
Q |
| |
|
|||||||||||||||| |||||||||||| ||| || |||||||||||||||||||||||| ||||| || | | |||||| |||| || | |||| |
|
|
| T |
17418150 |
aagaatgtatgtatttagagaatgcaaacatgattattttgtcaaaaagcacacaccacatatgttttcactctgatgactcgctatcactcaatgagga |
17418249 |
T |
|
| Q |
248 |
tgctttcaaaatagttgaatccttgcgaacatggtttgagtt |
289 |
Q |
| |
|
||| ||||||| |||||||||||||||||||| |||| |||| |
|
|
| T |
17418250 |
tgccttcaaaaaagttgaatccttgcgaacattgtttcagtt |
17418291 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 11 - 202
Target Start/End: Complemental strand, 17983163 - 17982972
Alignment:
| Q |
11 |
agatgtcggcatcatggtttgggatgaattgtaccaaaaatcattctttcaagatataaaaatggatgaattttctggcgacatttcattcaagatgcat |
110 |
Q |
| |
|
|||||| |||| |||| ||||| ||||||||||||||||||| ||||||||||| || | || ||||| | ||| | | ||||| ||||| ||||| |
|
|
| T |
17983163 |
agatgttggcaacatgatttggaatgaattgtaccaaaaatctttctttcaagacatccatattgatgattattcaagtgtgatttctttcaaaatgcac |
17983064 |
T |
|
| Q |
111 |
gatcttgtccatgatcttgctcaatcagtaatggggcaagaatgtatgtatttggagaatgcaaacttgactagtttgtcaaaaagcacaca |
202 |
Q |
| |
|
||||| |||||||||||||||||||||||| |||||| |||||| || ||| ||||||||| |||||| ||||||||||| ||||| |
|
|
| T |
17983063 |
gatctcgtccatgatcttgctcaatcagtagcggggcatgaatgtgtggttttagagaatgcatctgtgactaacttgtcaaaaagtacaca |
17982972 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 44 - 170
Target Start/End: Complemental strand, 30475598 - 30475472
Alignment:
| Q |
44 |
ccaaaaatcattctttcaagatataaaaatggatgaattttctggcgacatttcattcaagatgcatgatcttgtccatgatcttgctcaatcagtaatg |
143 |
Q |
| |
|
||||||||||||||| ||||| || || || ||||| | ||| || |||||| | |||||||||||||| || || |||||||||||||||||||| ||| |
|
|
| T |
30475598 |
ccaaaaatcattcttccaagacatcaagatagatgattattcaggagacattactttcaagatgcatgacctagtgcatgatcttgctcaatcagttatg |
30475499 |
T |
|
| Q |
144 |
gggcaagaatgtatgtatttggagaat |
170 |
Q |
| |
|
||| ||| |||||| |||||||||| |
|
|
| T |
30475498 |
gggtcagagtgtatgattttggagaat |
30475472 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 387 - 441
Target Start/End: Original strand, 30338748 - 30338802
Alignment:
| Q |
387 |
agtttaattcatttaaggtatttggaaatttgttatcttaacatagaaaagttgc |
441 |
Q |
| |
|
||||||||||||||||||||||||||| || ||||||| ||||||||||||||| |
|
|
| T |
30338748 |
agtttaattcatttaaggtatttggaacttacttatcttgacatagaaaagttgc |
30338802 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 387 - 441
Target Start/End: Complemental strand, 30483284 - 30483230
Alignment:
| Q |
387 |
agtttaattcatttaaggtatttggaaatttgttatcttaacatagaaaagttgc |
441 |
Q |
| |
|
||||||||||||||||||||||||||| || ||||||| ||||||||||||||| |
|
|
| T |
30483284 |
agtttaattcatttaaggtatttggaacttatttatcttgacatagaaaagttgc |
30483230 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 92 - 137
Target Start/End: Original strand, 30521556 - 30521601
Alignment:
| Q |
92 |
catttcattcaagatgcatgatcttgtccatgatcttgctcaatca |
137 |
Q |
| |
|
|||||| |||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
30521556 |
catttctttcaagttgcatgatcttgtccatgatcttgctcaatca |
30521601 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 92 - 137
Target Start/End: Original strand, 30561896 - 30561941
Alignment:
| Q |
92 |
catttcattcaagatgcatgatcttgtccatgatcttgctcaatca |
137 |
Q |
| |
|
|||||| |||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
30561896 |
catttctttcaagttgcatgatcttgtccatgatcttgctcaatca |
30561941 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 387 - 441
Target Start/End: Complemental strand, 30435702 - 30435648
Alignment:
| Q |
387 |
agtttaattcatttaaggtatttggaaatttgttatcttaacatagaaaagttgc |
441 |
Q |
| |
|
||||||||||||||||||||||||||| |||||| |||| | ||| ||||||||| |
|
|
| T |
30435702 |
agtttaattcatttaaggtatttggaactttgttctcttgatataaaaaagttgc |
30435648 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 387 - 441
Target Start/End: Complemental strand, 29853191 - 29853137
Alignment:
| Q |
387 |
agtttaattcatttaaggtatttggaaatttgttatcttaacatagaaaagttgc |
441 |
Q |
| |
|
||||||||||||||||||||||||||| || ||| |||| ||||| ||| ||||| |
|
|
| T |
29853191 |
agtttaattcatttaaggtatttggaacttcgttctcttgacataaaaatgttgc |
29853137 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 387 - 441
Target Start/End: Original strand, 30713645 - 30713699
Alignment:
| Q |
387 |
agtttaattcatttaaggtatttggaaatttgttatcttaacatagaaaagttgc |
441 |
Q |
| |
|
|||||||||||||||||||||||||||||| || |||| |||| ||||||||| |
|
|
| T |
30713645 |
agtttaattcatttaaggtatttggaaattcattctcttggcataaaaaagttgc |
30713699 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 99 - 136
Target Start/End: Complemental strand, 15347102 - 15347065
Alignment:
| Q |
99 |
ttcaagatgcatgatcttgtccatgatcttgctcaatc |
136 |
Q |
| |
|
|||| ||||||||||||||| ||||||||||||||||| |
|
|
| T |
15347102 |
ttcacgatgcatgatcttgttcatgatcttgctcaatc |
15347065 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 131
Target Start/End: Complemental strand, 16396770 - 16396737
Alignment:
| Q |
98 |
attcaagatgcatgatcttgtccatgatcttgct |
131 |
Q |
| |
|
||||||||||||||||||||| |||||||||||| |
|
|
| T |
16396770 |
attcaagatgcatgatcttgttcatgatcttgct |
16396737 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 99 - 136
Target Start/End: Complemental strand, 17927692 - 17927655
Alignment:
| Q |
99 |
ttcaagatgcatgatcttgtccatgatcttgctcaatc |
136 |
Q |
| |
|
||||| |||||||||||||| ||||||||||||||||| |
|
|
| T |
17927692 |
ttcaaaatgcatgatcttgttcatgatcttgctcaatc |
17927655 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 99 - 135
Target Start/End: Complemental strand, 15335732 - 15335696
Alignment:
| Q |
99 |
ttcaagatgcatgatcttgtccatgatcttgctcaat |
135 |
Q |
| |
|
||||| |||||||||||||| |||||||||||||||| |
|
|
| T |
15335732 |
ttcaaaatgcatgatcttgttcatgatcttgctcaat |
15335696 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 117; Significance: 2e-59; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 23 - 215
Target Start/End: Complemental strand, 26707579 - 26707387
Alignment:
| Q |
23 |
catggtttgggatgaattgtaccaaaaatcattctttcaagatataaaaatggatgaattttctggcgacatttcattcaagatgcatgatcttgtccat |
122 |
Q |
| |
|
|||||||||| | ||||||||||||||||||||||||||||| || |||| ||||| |||||| |||||||| |||||||||||||||||| ||||| |
|
|
| T |
26707579 |
catggtttggaaggaattgtaccaaaaatcattctttcaagactgtaagatgggtgaatattctggagacatttctttcaagatgcatgatcttatccat |
26707480 |
T |
|
| Q |
123 |
gatcttgctcaatcagtaatggggcaagaatgtatgtatttggagaatgcaaacttgactagtttgtcaaaaagcacacaccacattagtttt |
215 |
Q |
| |
|
||||| ||||||||||||||||| |||||||| ||||||||||||||||||||| ||| ||||||| ||||||||||||||||||| |||||| |
|
|
| T |
26707479 |
gatctcgctcaatcagtaatgggacaagaatgcatgtatttggagaatgcaaacatgagtagtttgacaaaaagcacacaccacataagtttt |
26707387 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 380 - 439
Target Start/End: Complemental strand, 26707231 - 26707172
Alignment:
| Q |
380 |
actaggtagtttaattcatttaaggtatttggaaatttgttatcttaacatagaaaagtt |
439 |
Q |
| |
|
|||||| || |||||||||||||||||||||||| || |||||||| | ||| ||||||| |
|
|
| T |
26707231 |
actagggagcttaattcatttaaggtatttggaacttcgttatcttgatataaaaaagtt |
26707172 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 109; Significance: 1e-54; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 23 - 412
Target Start/End: Original strand, 20296444 - 20296839
Alignment:
| Q |
23 |
catggtttgggatgaattgtaccaaaaatcattctttcaagatataaaaatggatgaattttctggcgacatttcattcaagatgcatgatcttgtccat |
122 |
Q |
| |
|
|||||||||| | ||||||||||||||||||||||||||||| || ||||| ||||||| |||| | || |||| |||||||||||||||||||| || |
|
|
| T |
20296444 |
catggtttggaaggaattgtaccaaaaatcattctttcaagaaatcaaaatagatgaatattctagagatatttatttcaagatgcatgatcttgtttat |
20296543 |
T |
|
| Q |
123 |
gatcttgctcaatcagtaatggggcaagaatgtatgtatttggagaatgcaaacttgactagtttgtcaaaaagcacacaccacattagttttgacaata |
222 |
Q |
| |
|
||||| ||| |||||| ||||| |||||||||||||||||||| || |||| | |||| ||||||| |||||||||||||||| |||||||| | | |
|
|
| T |
20296544 |
gatctccttcattcagtagtggggaaagaatgtatgtatttggaggataaaaacgttactaatttgtcacgaagcacacaccacattggttttgactaca |
20296643 |
T |
|
| Q |
223 |
aagactcgttatccttcgacaaggatgctttcaaaatagttgaatccttgcgaacatggtttgagtt------ttgtagaactttgtcaaaagaaaaaca |
316 |
Q |
| |
|
||||| ||||||| || |||||| ||| |||||| |||||||||||||||||||| |||| |||| || | || || ||| | | || |
|
|
| T |
20296644 |
cagacttgttatccatcaacaagggtgccttcaaagaagttgaatccttgcgaacattgtttcagttgagtgattatcatcattattccaaaatagatca |
20296743 |
T |
|
| Q |
317 |
tgattacttcccaacaaacctttctcttcgggttttatgcataacctttatccgagagccattactaggtagtttaattcatttaaggtatttgga |
412 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||| ||| | |||||| || | || || ||||| |||||||||||||||||||||||||| |
|
|
| T |
20296744 |
tgattacatcccaacaaacctttctcttcgggttttgcgcacatcctttacccatgtgcgatcactagagagtttaattcatttaaggtatttgga |
20296839 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 28 - 176
Target Start/End: Complemental strand, 52352197 - 52352049
Alignment:
| Q |
28 |
tttgggatgaattgtaccaaaaatcattctttcaagatataaaaatggatgaattttctggcgacatttcattcaagatgcatgatcttgtccatgatct |
127 |
Q |
| |
|
||||| |||||||||||||||| |||||||||||||| || || || |||| | || || |||||||| |||||||||||||||||||| |||||||| |
|
|
| T |
52352197 |
tttggaatgaattgtaccaaaagtcattctttcaagacatcaagatcaatgattatttaggagacatttctttcaagatgcatgatcttgtacatgatct |
52352098 |
T |
|
| Q |
128 |
tgctcaatcagtaatggggcaagaatgtatgtatttggagaatgcaaac |
176 |
Q |
| |
|
|||||||||| | |||||| ||| |||||| | |||||||| ||||| |
|
|
| T |
52352097 |
tgctcaatcaattgtggggccagagtgtatgattatggagaatacaaac |
52352049 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 72; Significance: 1e-32; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 23 - 214
Target Start/End: Complemental strand, 7099665 - 7099474
Alignment:
| Q |
23 |
catggtttgggatgaattgtaccaaaaatcattctttcaagatataaaaatggatgaattttctggcgacatttcattcaagatgcatgatcttgtccat |
122 |
Q |
| |
|
|||| ||||| ||||||||||||||||||| ||||||||||| || | |||||||| | ||| | | ||||| ||||| ||||||||||| |||||| |
|
|
| T |
7099665 |
catgatttggaatgaattgtaccaaaaatctttctttcaagacatccatatggatgattattcaagagtgatttctttcaaaatgcatgatctcgtccat |
7099566 |
T |
|
| Q |
123 |
gatcttgctcaatcagtaatggggcaagaatgtatgtatttggagaatgcaaacttgactagtttgtcaaaaagcacacaccacattagttt |
214 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||| ||| || |||||| | |||||| ||||||||||||||||| || |||||||| |
|
|
| T |
7099565 |
gatcttgctcaatcagtaggggggcaagaatgtatggttttagataatgcatatgtgactaacttgtcaaaaagcacacatcatattagttt |
7099474 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 11 - 214
Target Start/End: Original strand, 7581569 - 7581772
Alignment:
| Q |
11 |
agatgtcggcatcatggtttgggatgaattgtaccaaaaatcattctttcaagatataaaaatggatgaattttctggcgacatttcattcaagatgcat |
110 |
Q |
| |
|
|||||| |||| |||| ||||| ||||||||| |||||| || ||||||||||| || | |||||||| ||| | |||||||| ||||| |||||| |
|
|
| T |
7581569 |
agatgttggcaacatgatttggaatgaattgtgccaaaagtctttctttcaagacattcatatggatgatgattcaagagacatttctttcaaaatgcat |
7581668 |
T |
|
| Q |
111 |
gatcttgtccatgatcttgctcaatcagtaatggggcaagaatgtatgtatttggagaatgcaaacttgactagtttgtcaaaaagcacacaccacatta |
210 |
Q |
| |
|
||||| ||||||||||||||| ||||||| ||| ||||||||||||| ||| ||||||| | ||||| | | ||||||||||||| || || |||| |
|
|
| T |
7581669 |
gatctcatccatgatcttgctcgatcagtagtggtgcaagaatgtatggttttagagaatgaatgtttgacaaatatgtcaaaaagcacccatcatatta |
7581768 |
T |
|
| Q |
211 |
gttt |
214 |
Q |
| |
|
|||| |
|
|
| T |
7581769 |
gttt |
7581772 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 44; Significance: 7e-16; HSPs: 4)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 313 - 440
Target Start/End: Original strand, 25294018 - 25294145
Alignment:
| Q |
313 |
aacatgattacttcccaacaaacctttctcttcgggttttatgcataacctttatccgagagccattactaggtagtttaattcatttaaggtatttgga |
412 |
Q |
| |
|
|||||||| ||||| ||||||||| || |||||| |||||||||| | ||||||||| || |||| | |||| || |||||||||||||||||||||| |
|
|
| T |
25294018 |
aacatgatcacttctcaacaaaccgttgtcttcgagttttatgcacatcctttatccaagtaccatcaataggaagcttaattcatttaaggtatttggc |
25294117 |
T |
|
| Q |
413 |
aatttgttatcttaacatagaaaagttg |
440 |
Q |
| |
|
| ||| || |||| ||||| ||| |||| |
|
|
| T |
25294118 |
actttattctcttgacataaaaatgttg |
25294145 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 25293774 - 25293828
Alignment:
| Q |
11 |
agatgtcggcatcatggtttgggatgaattgtaccaaaaatcattctttcaagat |
65 |
Q |
| |
|
|||||| |||| |||||||||| ||||||||| |||||||||||||||||||||| |
|
|
| T |
25293774 |
agatgttggcagcatggtttggaatgaattgtgccaaaaatcattctttcaagat |
25293828 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 99 - 136
Target Start/End: Complemental strand, 8187202 - 8187165
Alignment:
| Q |
99 |
ttcaagatgcatgatcttgtccatgatcttgctcaatc |
136 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
8187202 |
ttcaagatgcatgatcttgtacatgatcttgctcaatc |
8187165 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 109 - 137
Target Start/End: Original strand, 25293834 - 25293862
Alignment:
| Q |
109 |
atgatcttgtccatgatcttgctcaatca |
137 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
25293834 |
atgatcttgtccatgatcttgctcaatca |
25293862 |
T |
|
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