View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF5256-Insertion-1 (Length: 709)
Name: NF5256-Insertion-1
Description: NF5256
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5256-Insertion-1 |
 | |
|
| [»] scaffold0074 (1 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 398; Significance: 0; HSPs: 10)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 398; E-Value: 0
Query Start/End: Original strand, 8 - 425
Target Start/End: Original strand, 24689486 - 24689903
Alignment:
| Q |
8 |
aaaggttgaagatcaggatagaattggtgaacgtgtatgctagctgctgagctgtagaaattggcagaaggtaaaatagacgttgatggagtttttcccg |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24689486 |
aaaggttgaagatcaggatagaattggtgaacgtgtatgctagctgctgagctgtagaaattggcagaaggtaaaatagacgttgatggagtttttcccg |
24689585 |
T |
|
| Q |
108 |
aactaggagacagttgaggtcaatatgttttgcacgctcatgaaatgatgaattggtggcaatgtgacagggcagaggcattatcaaagtagaggaatac |
207 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24689586 |
aactaggagacagttgaggtcaatattttttgcacgctcatgaaatgatgaattggtggcaatgtgacagggcagaggcattatcaaagtagaggaatac |
24689685 |
T |
|
| Q |
208 |
tagtttaatgaatttgatttgaagtcgtcaagcaactgatccaatgtgattcacaaaccatggatgtcaaagatcgatattccgagagataagatattgt |
307 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
24689686 |
tagtttaatgaatttgatttgaagtcgtcaagcaactgatccaatgtgattcacaaaccgtggatgtcaaagatcgatattccgagagataagacattgt |
24689785 |
T |
|
| Q |
308 |
aggttgatttatcaacttactaaaaacttctattaattatccaatattatatattctaacagatttttacctatcaaccaacctttttaaagtgaaagga |
407 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24689786 |
aggttgatttatcaacttactaaaaacttctattaatcatccaatattatatatcctaacagatttttacctatcaaccaacctttttaaagtgaaagga |
24689885 |
T |
|
| Q |
408 |
aaattgggactacttttg |
425 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
24689886 |
aaattgggactacttttg |
24689903 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 426 - 708
Target Start/End: Original strand, 5823275 - 5823558
Alignment:
| Q |
426 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaaccccttaaca |
525 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
5823275 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
5823374 |
T |
|
| Q |
526 |
aataagggg-aaaaaccacgggggcaagagtagaaaactttcactaagtggaagaaattacagggac-ctctctaaatacaaggagagtacaattaccac |
623 |
Q |
| |
|
||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||| |
|
|
| T |
5823375 |
aataaggggaaaaaaccac-ggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaattaccac |
5823473 |
T |
|
| Q |
624 |
tctctcttataaataggagaatacaaactaacacaaactaggagaaacctcacagggagaaactaatttt-ctctctatatttttt |
708 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||| |
|
|
| T |
5823474 |
tctctcttataaataggagaatactaactaacacaaactaggagaaacctcaca-ggagaaactatttttcctctctatatttttt |
5823558 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 210; E-Value: 1e-114
Query Start/End: Original strand, 426 - 708
Target Start/End: Original strand, 5818513 - 5818796
Alignment:
| Q |
426 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaaccccttaaca |
525 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
5818513 |
tgttaggtaccagagtaacaaaatattatcacgcaactaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaact |
5818612 |
T |
|
| Q |
526 |
aataagggg-aaaaaccacgggggcaagagtagaaaactttcactaagtggaagaaattacagggac-ctctctaaatacaaggagagtacaattaccac |
623 |
Q |
| |
|
||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||| |
|
|
| T |
5818613 |
aataaggggaaaaaaccac-ggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaattaccac |
5818711 |
T |
|
| Q |
624 |
tctctcttataaataggagaatacaaactaacacaaactaggagaaacctcacagggagaaactaatttt-ctctctatatttttt |
708 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||| |
|
|
| T |
5818712 |
tctctcttataaataggagaatactaactaacacaaactaggagaaacctcaca-ggagaaactatttttcctctctatatttttt |
5818796 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 184; E-Value: 3e-99
Query Start/End: Original strand, 426 - 707
Target Start/End: Complemental strand, 54546200 - 54545917
Alignment:
| Q |
426 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaaccccttaaca |
525 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| ||||||||||||||||| |||| |
|
|
| T |
54546200 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagatgagaaaagaggaactgaacatacaata-tttacgtggaaacccctcaaca |
54546102 |
T |
|
| Q |
526 |
aataagggg-aaaaaccacgggggcaagagtagaaaactttcactaagtggaagaaattacagggac-ctctctaaatacaaggagagtacaattaccac |
623 |
Q |
| |
|
||||||||| ||||||||| ||||| |||||||| ||||||||||||||||| ||||||||||| | |||||||| ||||||||||||||||||||||| |
|
|
| T |
54546101 |
aataaggggaaaaaaccac-ggggctagagtagagaactttcactaagtggatgaaattacaggacctctctctaactacaaggagagtacaattaccac |
54546003 |
T |
|
| Q |
624 |
tctctcttataaataggagaatacaa--actaacacaaactaggagaaacctcacagggagaaactaa-ttttctctctatattttt |
707 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||| | ||||||||||||||||| ||||||||||| |||||||||||||||||| |
|
|
| T |
54546002 |
tctctcttataaataggagaatacaaacactaacactacctaggagaaacctcaca-ggagaaactaatttttctctctatattttt |
54545917 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 174; E-Value: 3e-93
Query Start/End: Original strand, 426 - 671
Target Start/End: Original strand, 2817263 - 2817510
Alignment:
| Q |
426 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaaccccttaaca |
525 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
2817263 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagaagagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
2817362 |
T |
|
| Q |
526 |
aataaggggaaaaaccacgggggcaagagtagaaaactttcactaagtggaagaaattacagggac-ctctctaaatacaaggagagtacaattacca-- |
622 |
Q |
| |
|
|||||||| ||||||||| ||||||||||| | |||| |||||||||||||||||||||| | || |||||||||||||||||||||||||| |||| |
|
|
| T |
2817363 |
aataagggaaaaaaccac-agggcaagagtaaagaactctcactaagtggaagaaattacaagaactctctctaaatacaaggagagtacaatcaccact |
2817461 |
T |
|
| Q |
623 |
ctctctcttataaataggagaatacaaactaacacaaactaggagaaac |
671 |
Q |
| |
|
||||||||||||||||||||||||| |||||| |||||||||||||||| |
|
|
| T |
2817462 |
ctctctcttataaataggagaatactaactaatacaaactaggagaaac |
2817510 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 426 - 579
Target Start/End: Original strand, 24659136 - 24659287
Alignment:
| Q |
426 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaaccccttaaca |
525 |
Q |
| |
|
|||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| |||| |
|
|
| T |
24659136 |
tgttaggtaccagagtaataaaatattatcacacagctaaaataagagatgagaaaagaggaactgaacacacaacattttacgtggaaacccctcaaca |
24659235 |
T |
|
| Q |
526 |
aataagggg-aaaaaccacgggggcaagagtagaaaactttcactaagtggaaga |
579 |
Q |
| |
|
||||||||| ||||||||| ||||||||||||| |||||||||||||||||||| |
|
|
| T |
24659236 |
aataaggggaaaaaaccac-ggggcaagagtag--aactttcactaagtggaaga |
24659287 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 434 - 539
Target Start/End: Complemental strand, 4579360 - 4579255
Alignment:
| Q |
434 |
accagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaaccccttaacaaataaggg |
533 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
4579360 |
accagagtaacaaaatattatcacgcaactaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggg |
4579261 |
T |
|
| Q |
534 |
gaaaaa |
539 |
Q |
| |
|
|||||| |
|
|
| T |
4579260 |
gaaaaa |
4579255 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 440 - 611
Target Start/End: Original strand, 31204781 - 31204950
Alignment:
| Q |
440 |
gtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaaccccttaacaaataag-gggaaaa |
538 |
Q |
| |
|
|||||||||||||| ||||||| ||||| |||||| || |||||||||||||||| |||||||||| |||||||||||||| |||||||||| || |||| |
|
|
| T |
31204781 |
gtaacaaaatattagcacgcagttaaaagaagagatga-aaaagaggaactgaactcacaatattt-acgtggaaacccctcaacaaataagaggaaaaa |
31204878 |
T |
|
| Q |
539 |
accacgggggcaagagtagaaaactttcactaagtggaagaaattacagggacctctctaaatacaaggagag |
611 |
Q |
| |
|
| ||||| ||||| |||||| |||||||||||||||| | |||||||| ||||||||||||| |||||||| |
|
|
| T |
31204879 |
atcacggaggcaatagtagagaactttcactaagtgggaaaaattaca-aaacctctctaaatataaggagag |
31204950 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 592 - 707
Target Start/End: Original strand, 24671187 - 24671292
Alignment:
| Q |
592 |
ctctctaaatacaaggagagtacaattaccactctctcttataaataggagaatacaaactaacacaaactaggagaaacctcacagggagaaacta-at |
690 |
Q |
| |
|
|||||||||||||||||||| ||||||| ||||||||| |||||||||||||| ||| |||||||||||||||||| |||||||||| || |
|
|
| T |
24671187 |
ctctctaaatacaaggagagacaaattacc-ctctctcttg-aaataggagaatactaac--------actaggagaaacctcaca-ggagaaactatat |
24671275 |
T |
|
| Q |
691 |
tttctctctatattttt |
707 |
Q |
| |
|
|| |||||||||||||| |
|
|
| T |
24671276 |
ttcctctctatattttt |
24671292 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 426 - 470
Target Start/End: Complemental strand, 25877130 - 25877086
Alignment:
| Q |
426 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataa |
470 |
Q |
| |
|
|||||||||||||| ||||| |||||||| ||||| ||||||||| |
|
|
| T |
25877130 |
tgttaggtaccagaataacataatattattacgcaactaaaataa |
25877086 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 218; Significance: 1e-119; HSPs: 13)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 426 - 708
Target Start/End: Complemental strand, 42266220 - 42265937
Alignment:
| Q |
426 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaaccccttaaca |
525 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
42266220 |
tgttagataccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
42266121 |
T |
|
| Q |
526 |
aataaggggaaaaa-ccacgggggcaagagtagaaaactttcactaagtggaagaaattacagggac-ctctctaaatacaaggagagtacaattaccac |
623 |
Q |
| |
|
|||||||||||||| |||||||| |||||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| |
|
|
| T |
42266120 |
aataaggggaaaaaaccacgggg-caagagtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccac |
42266022 |
T |
|
| Q |
624 |
tctctcttataaataggagaatacaaactaacacaaactaggagaaacctcacagggagaaactaatttt-ctctctatatttttt |
708 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||| ||||||||||||||| |
|
|
| T |
42266021 |
tctctcttataaataggagaatacaaactaacacaaactaggagaaacctcaca-ggagaagctatttttcctctctatatttttt |
42265937 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 426 - 708
Target Start/End: Complemental strand, 42270939 - 42270656
Alignment:
| Q |
426 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaaccccttaaca |
525 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
42270939 |
tgttagataccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
42270840 |
T |
|
| Q |
526 |
aataaggggaaaaa-ccacgggggcaagagtagaaaactttcactaagtggaagaaattacagggac-ctctctaaatacaaggagagtacaattaccac |
623 |
Q |
| |
|
|||||||||||||| |||||||| |||||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| |
|
|
| T |
42270839 |
aataaggggaaaaaaccacgggg-caagagtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccac |
42270741 |
T |
|
| Q |
624 |
tctctcttataaataggagaatacaaactaacacaaactaggagaaacctcacagggagaaactaatttt-ctctctatatttttt |
708 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||| ||||||||||||||| |
|
|
| T |
42270740 |
tctctcttataaataggagaatacaaactaacacaaactaggagaaacctcaca-ggagaagctatttttcctctctatatttttt |
42270656 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 426 - 708
Target Start/End: Original strand, 48701821 - 48702104
Alignment:
| Q |
426 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaaccccttaaca |
525 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
48701821 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
48701920 |
T |
|
| Q |
526 |
aataagggg-aaaaaccacgggggcaagagtagaaaactttcactaagtggaagaaattacagggac-ctctctaaatacaaggagagtacaattaccac |
623 |
Q |
| |
|
||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||| | |||||||| |||||||||||||||| |||||| |
|
|
| T |
48701921 |
aataaggggaaaaaaccac-ggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaaataccac |
48702019 |
T |
|
| Q |
624 |
tctctcttataaataggagaatacaaactaacacaaactaggagaaacctcacagggagaaactaatttt-ctctctatatttttt |
708 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||| |
|
|
| T |
48702020 |
tctctcttataaataggagaatactaactaacacaaactaggagaaacctcaca-ggagaaactatttttcctctctatatttttt |
48702104 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 432 - 708
Target Start/End: Original strand, 24520031 - 24520308
Alignment:
| Q |
432 |
gtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaaccccttaacaaataag |
531 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
24520031 |
gtaccagagtaacaaaatattatcacgcaactaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataag |
24520130 |
T |
|
| Q |
532 |
ggg-aaaaaccacgggggcaagagtagaaaactttcactaagtggaagaaattacagggac-ctctctaaatacaaggagagtacaattaccactctctc |
629 |
Q |
| |
|
||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
24520131 |
gggaaaaaaccac-ggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaattaccactctctc |
24520229 |
T |
|
| Q |
630 |
ttataaataggagaatacaaactaacacaaactaggagaaacctcacagggagaaactaatttt-ctctctatatttttt |
708 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||| |
|
|
| T |
24520230 |
ttataaataggagaatactaactaacacaaactaggagaaacctcaca-ggagaaactatttttcctctctatatttttt |
24520308 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 426 - 708
Target Start/End: Original strand, 48697131 - 48697415
Alignment:
| Q |
426 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaaccccttaaca |
525 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
48697131 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagaagagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
48697230 |
T |
|
| Q |
526 |
aataagggg--aaaaaccacgggggcaagagtagaaaactttcactaagtggaagaaattacagggac-ctctctaaatacaaggagagtacaattacca |
622 |
Q |
| |
|
||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||| | |||||||| |||||||||||||||| ||||| |
|
|
| T |
48697231 |
aataaggggaaaaaaaccac-ggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaaatacca |
48697329 |
T |
|
| Q |
623 |
ctctctcttataaataggagaatacaaactaacacaaactaggagaaacctcacagggagaaactaatttt-ctctctatatttttt |
708 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||| |
|
|
| T |
48697330 |
ctctctcttataaataggagaatactaactaacacaaactaggagaaacctcaca-ggagaaactatttttcctctctatatttttt |
48697415 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 426 - 707
Target Start/End: Original strand, 30945477 - 30945760
Alignment:
| Q |
426 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaaccccttaaca |
525 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
30945477 |
tgttaggtatcagagtaacaaaatattatcacgcagctaaaataagagaagagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
30945576 |
T |
|
| Q |
526 |
aataaggggaaaaaccacgggggcaagagtagaaaactttcactaagtggaagaaattacagggac-ctctctaaatacaaggagagtacaattaccact |
624 |
Q |
| |
|
|||||||| ||||| ||| |||||||||||||| |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| |
|
|
| T |
30945577 |
aataagggaaaaaatcac-ggggcaagagtagagaactttcactaagtggaagaaattacagaacctctctctaaatacaaggagagtacaattaccact |
30945675 |
T |
|
| Q |
625 |
ctctcttataaataggagaatacaa--actaacacaaactaggagaaacctcacagggagaaactaa-ttttctctctatattttt |
707 |
Q |
| |
|
||||||||||||||||||||||||| |||||||| | ||||||||||||||||| ||||||||||| |||||||||||||||||| |
|
|
| T |
30945676 |
ctctcttataaataggagaatacaaacactaacactacctaggagaaacctcaca-ggagaaactaatttttctctctatattttt |
30945760 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 426 - 707
Target Start/End: Original strand, 30950183 - 30950466
Alignment:
| Q |
426 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaaccccttaaca |
525 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
30950183 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagataagagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
30950282 |
T |
|
| Q |
526 |
aataaggggaaaaaccacgggggcaagagtagaaaactttcactaagtggaagaaattacagggac-ctctctaaatacaaggagagtacaattaccact |
624 |
Q |
| |
|
|||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||||||||| |
|
|
| T |
30950283 |
aataagggaaaaaaccac-ggggcaagagtagagaactttcactaagtggaagaaattacagaacctctctctaaatacaaggaaagtacaattaccact |
30950381 |
T |
|
| Q |
625 |
ctctcttataaataggagaatacaa--actaacacaaactaggagaaacctcacagggagaaactaa-ttttctctctatattttt |
707 |
Q |
| |
|
||||||||||||||||||||||||| |||||||| | ||||||||||||||||| ||||||||||| |||||||||||||||||| |
|
|
| T |
30950382 |
ctctcttataaataggagaatacaaacactaacactacctaggagaaacctcaca-ggagaaactaatttttctctctatattttt |
30950466 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 425 - 707
Target Start/End: Complemental strand, 10427598 - 10427324
Alignment:
| Q |
425 |
gtgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaaccccttaac |
524 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| |
|
|
| T |
10427598 |
gtgttaggtaccagagtaacagaatattatcacgcaactaaaataagagacgagaaaagaggaactgaacacacaatattttacgcggaaacccctcaac |
10427499 |
T |
|
| Q |
525 |
aaataaggggaaaaaccacgggggcaagagtagaaaactttcactaagtggaaga-aattacagggac--ctctctaaatacaaggagagtacaattacc |
621 |
Q |
| |
|
||||||||||||||| | |||| || |||||| |||||||||||||||||||| ||||||| ||| |||||||||||||||||||| ||||||| |
|
|
| T |
10427498 |
aaataaggggaaaaaactacggggaaaaagtagataactttcactaagtggaagacaattaca-agacttctctctaaatacaaggagagacaaattacc |
10427400 |
T |
|
| Q |
622 |
actctctcttataaataggagaatacaaactaacacaaactaggagaaacctcacagggagaaacta-attttctctctatattttt |
707 |
Q |
| |
|
||||||||| |||||||||||||| ||| |||||||||||||||||| |||||||||| |||| |||||||||||||| |
|
|
| T |
10427399 |
-ctctctctt-gaaataggagaatactaac--------actaggagaaacctcaca-ggagaaactatatttcctctctatattttt |
10427324 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 550 - 677
Target Start/End: Complemental strand, 1979375 - 1979253
Alignment:
| Q |
550 |
aagagtagaaaactttcactaagtggaagaaattacagggacctctctaaatacaaggagagtacaattaccactctctcttataaataggagaatacaa |
649 |
Q |
| |
|
||||||||| |||||||| |||| ||||||||||||| | |||||||||||| ||||||| ||| | |||||||||||||||||||| |||||||| |
|
|
| T |
1979375 |
aagagtagataactttcagtaagaggaagaaattacacg-acctctctaaatgcaaggagggtatatttaccactctctcttataaacaggagaat---- |
1979281 |
T |
|
| Q |
650 |
actaacacaaactaggagaaacctcaca |
677 |
Q |
| |
|
|||| ||| ||| ||||||||||||||| |
|
|
| T |
1979280 |
actagcactaaccaggagaaacctcaca |
1979253 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 439 - 633
Target Start/End: Complemental strand, 48783031 - 48782850
Alignment:
| Q |
439 |
agtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaaccccttaacaaataaggggaaaa |
538 |
Q |
| |
|
|||| |||||||||||||||| |||||||||| ||||||||| ||||||||||||||||||| |||||||||||| || ||||||||| ||||||| |
|
|
| T |
48783031 |
agtatcaaaatattatcacgcgattaaaataagaaacgagaaaacaggaactgaacacacaata-tttacgtggaaatttctcaacaaataaagggaaaa |
48782933 |
T |
|
| Q |
539 |
accacgggggcaagagtagaaaactttcactaagtggaagaaattacagggac-ctctctaaatacaaggagagtacaattaccactctctcttat |
633 |
Q |
| |
|
| || ||| || ||||||||||||||||||||||||| | | | ||||||||||||| | ||||||||||||||||||||||||| |
|
|
| T |
48782932 |
a-catggg----------gagaactttcactaagtggaagaaattagatgacctctctctaaatacatg--gagtacaattaccactctctcttat |
48782850 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 437 - 530
Target Start/End: Complemental strand, 30165968 - 30165876
Alignment:
| Q |
437 |
agagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaaccccttaacaaataa |
530 |
Q |
| |
|
|||||||||||||| |||||| || ||||||||||| | ||||||| | ||| |||||||| |||| |||||||| ||| ||||| ||||||| |
|
|
| T |
30165968 |
agagtaacaaaataatatcacacaactaaaataagatatgagaaaaaatgaattgaacacataata-tttacgtgaaaattccttatcaaataa |
30165876 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 428 - 505
Target Start/End: Original strand, 36615361 - 36615438
Alignment:
| Q |
428 |
ttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattt |
505 |
Q |
| |
|
|||||||| ||||||| ||||||||||| | ||| |||||||||| | |||||||||| ||| ||||| ||| ||||| |
|
|
| T |
36615361 |
ttaggtactagagtaataaaatattatcgcacagttaaaataagatatgagaaaagagaaaccgaacatacattattt |
36615438 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 479 - 539
Target Start/End: Complemental strand, 17248112 - 17248053
Alignment:
| Q |
479 |
aaaagaggaactgaacacacaatattttacgtggaaaccccttaacaaataaggggaaaaa |
539 |
Q |
| |
|
||||||| |||| || ||||||||||| || |||||| ||||||| ||||||||||||||| |
|
|
| T |
17248112 |
aaaagagaaactaaatacacaatattt-acatggaaatcccttaataaataaggggaaaaa |
17248053 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 217; Significance: 1e-119; HSPs: 10)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 426 - 708
Target Start/End: Original strand, 26976131 - 26976414
Alignment:
| Q |
426 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaaccccttaaca |
525 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
26976131 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
26976230 |
T |
|
| Q |
526 |
aataaggggaaaaaccacgggggcaagagtagaaaactttcactaagtggaagaaattacagggac-ctctctaaatacaaggagagtacaattaccact |
624 |
Q |
| |
|
|||||||||||||| | |||||||||||||| ||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||| |
|
|
| T |
26976231 |
aataaggggaaaaaaccaaggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaattaccact |
26976330 |
T |
|
| Q |
625 |
ctctcttataaataggagaatacaaactaacacaaactaggagaaacctcacagggagaaactaatttt-ctctctatatttttt |
708 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||| |
|
|
| T |
26976331 |
ctctcttataaataggagaatactaactaacacaaactaggagaaacctcaca-ggagaaactatttttcctctctatatttttt |
26976414 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 426 - 708
Target Start/End: Complemental strand, 1235018 - 1234735
Alignment:
| Q |
426 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaaccccttaaca |
525 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
1235018 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
1234919 |
T |
|
| Q |
526 |
aataaggggaaaaa-ccacgggggcaagagtagaaaactttcactaagtggaagaaattacagggac-ctctctaaatacaaggagagtacaattaccac |
623 |
Q |
| |
|
|||||||||||||| |||||||| |||||||||| ||||||||||||||||||||||||||||| | |||||||| |||||||||||||||| |||||| |
|
|
| T |
1234918 |
aataaggggaaaaaaccacgggg-caagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaaataccac |
1234820 |
T |
|
| Q |
624 |
tctctcttataaataggagaatacaaactaacacaaactaggagaaacctcacagggagaaactaatttt-ctctctatatttttt |
708 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||| |
|
|
| T |
1234819 |
tctctcttataaataggagaatactaactaacacaaactaggagaaacctcaca-ggagaaactatttttcctctctatatttttt |
1234735 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 426 - 707
Target Start/End: Original strand, 27878709 - 27878993
Alignment:
| Q |
426 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaaccccttaaca |
525 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
27878709 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
27878808 |
T |
|
| Q |
526 |
aataagggg-aaaaaccacgggggcaagagtagaaaactttcactaagtggaagaaattacagggac-ctctctaaatacaaggagagtacaattaccac |
623 |
Q |
| |
|
||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| |
|
|
| T |
27878809 |
aataaggggaaaaaaccac-ggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccac |
27878907 |
T |
|
| Q |
624 |
tctctcttataaataggagaatacaa--actaacacaaactaggagaaacctcacagggagaaactaa-ttttctctctatattttt |
707 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||| | ||||||||||||||||| ||||||||||| |||||||||||||||||| |
|
|
| T |
27878908 |
tctctcttataaataggagaatacaaacactaacactacctaggagaaacctcaca-ggagaaactaatttttctctctatattttt |
27878993 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 210; E-Value: 1e-114
Query Start/End: Original strand, 426 - 708
Target Start/End: Original strand, 27873990 - 27874273
Alignment:
| Q |
426 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaaccccttaaca |
525 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
27873990 |
tgttaggtaccagagtaacaaaatattatcacgcatctaaaataagagaagagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
27874089 |
T |
|
| Q |
526 |
aat-aaggggaaaaaccacgggggcaagagtagaaaactttcactaagtggaagaaattacagggac-ctctctaaatacaaggagagtacaattaccac |
623 |
Q |
| |
|
||| ||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| |
|
|
| T |
27874090 |
aataaagggaaaaaaccac-ggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccac |
27874188 |
T |
|
| Q |
624 |
tctctcttataaataggagaatacaaactaacacaaactaggagaaacctcacagggagaaactaatttt-ctctctatatttttt |
708 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||| ||||||||||||||| |
|
|
| T |
27874189 |
tctctcttataaataggagaatacaaactaacacaaactaggagaaacctcaca-ggagaagctatttttcctctctatatttttt |
27874273 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 425 - 611
Target Start/End: Complemental strand, 18968195 - 18968007
Alignment:
| Q |
425 |
gtgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaaccccttaac |
524 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| ||| |
|
|
| T |
18968195 |
gtgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaatacataatattttacgtggaaacccctcaac |
18968096 |
T |
|
| Q |
525 |
aaataaggggaaaaa-ccacgggggcaagagtagaaaactttcactaagtggaaga-aattacagggac--ctctctaaatacaaggagag |
611 |
Q |
| |
|
||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||| |
|
|
| T |
18968095 |
aaataaggggaaaaaaccacgggg-caagagtagaaaactttcactaagtggaagacaattaca-agacttctctctaaatacaaggagag |
18968007 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 426 - 647
Target Start/End: Complemental strand, 30986829 - 30986603
Alignment:
| Q |
426 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaa---acccctta |
522 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| |||||| | |
|
|
| T |
30986829 |
tgttaggtatcagagtaacaaaatattatcacgtagctaaaataagagacgagaaaagaggaactgaacgcacaata-tttacgtggaaagtacccctca |
30986731 |
T |
|
| Q |
523 |
acaaataagg---ggaaaaaccacgggggcaagagtagaaaactttcactaagtggaagaaattacagggac-ctctctaaatacaaggagagtacaatt |
618 |
Q |
| |
|
|||||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||| |||| | |||||||||| |||||||||||||||| |
|
|
| T |
30986730 |
acaaataaggaaaaaaaaaaccac-ggggcaagagtagagaactttcactaagtggaagaaattgcaggacctctctctaaatgcaaggagagtacaatt |
30986632 |
T |
|
| Q |
619 |
accactctctcttataaataggagaatac |
647 |
Q |
| |
|
||||||||||||| ||||||| ||||||| |
|
|
| T |
30986631 |
accactctctcttgtaaatagaagaatac |
30986603 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 472 - 708
Target Start/End: Complemental strand, 30966923 - 30966688
Alignment:
| Q |
472 |
agacgagaaaagaggaactgaacacacaatattttacgtggaaaccccttaacaaataaggggaa--aaaccacgggggcaagagtagaaaactttcact |
569 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||| || ||| ||||||| |||||||||| |||||||||| |
|
|
| T |
30966923 |
agacgagaaaagaggaactgaacacacaatattt-acgtggaaacccatcaacaaataagggaaataaaatcacgggg-caagagtagagaactttcact |
30966826 |
T |
|
| Q |
570 |
aagtggaagaaattacagggac-ctctctaaatacaaggagagtacaattaccactctctcttataaataggagaatacaaactaacacaaactaggaga |
668 |
Q |
| |
|
|||||||||||||| ||| | |||||||||| ||||||||||||||||||||||||||||| ||||||| ||||| ||| | | | |||||||| |
|
|
| T |
30966825 |
aagtggaagaaattgcagaacctctctctaaatgcaaggagagtacaattaccactctctcttgtaaatagaagaat----actgaggctacctaggaga |
30966730 |
T |
|
| Q |
669 |
aacctcacagggagaaactaat--tttctctctatatttttt |
708 |
Q |
| |
|
||||||||| | |||||||| | |||||||||||||||||| |
|
|
| T |
30966729 |
aacctcacaagtagaaactatttctttctctctatatttttt |
30966688 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 431 - 584
Target Start/End: Complemental strand, 21966860 - 21966710
Alignment:
| Q |
431 |
ggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaaccccttaacaaataa |
530 |
Q |
| |
|
||||||| |||||| ||| ||||||||||||||||| ||| | | ||||||||||||||| |||| | ||||||| | |||||||||||| || |||||| |
|
|
| T |
21966860 |
ggtaccaaagtaacgaaacattatcacgcagctaaa-taacatatgagaaaagaggaactaaacataaaatattt-atgtggaaacccctcaataaataa |
21966763 |
T |
|
| Q |
531 |
ggggaaaaaccacgggggcaagagtagaaaactttcactaagtggaagaaatta |
584 |
Q |
| |
|
|||||||| || |||| |||||||||| |||||||||||| |||||||||||| |
|
|
| T |
21966762 |
agggaaaaatcatgggg-caagagtagagaactttcactaaatggaagaaatta |
21966710 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 445 - 611
Target Start/End: Original strand, 23012520 - 23012683
Alignment:
| Q |
445 |
aaaatattatcacgcagctaaaataagagacgag-aaaagaggaactgaacacacaatattttacgtggaaaccccttaacaaataaggggaaaaaccac |
543 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||| |||||| ||| |||||||||| || ||||||||||||| | | | || ||||||||||||||| |
|
|
| T |
23012520 |
aaaatattatcacgcaactaaaataagagacgagaaaaagaagaattgaacacacatta-tttacgtggaaactcgtcacaaattaaggggaaaaacca- |
23012617 |
T |
|
| Q |
544 |
gggggcaagagtagaaaactttcactaagtggaagaaattacagggacctctctaaatacaaggagag |
611 |
Q |
| |
|
||||||||||||| ||||||||||||||| ||||||| || ||||||| ||||||||| ||||| |
|
|
| T |
23012618 |
-tgggcaagagtagagaactttcactaagtgagagaaatttca-agacctctttaaatacaatgagag |
23012683 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 426 - 477
Target Start/End: Complemental strand, 30967725 - 30967674
Alignment:
| Q |
426 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacga |
477 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
30967725 |
tgttaggtaccagagtaacaaaatattatcaagcagctaaaataagagacga |
30967674 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 215; Significance: 1e-117; HSPs: 5)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 215; E-Value: 1e-117
Query Start/End: Original strand, 425 - 708
Target Start/End: Complemental strand, 41723454 - 41723170
Alignment:
| Q |
425 |
gtgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaaccccttaac |
524 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
41723454 |
gtgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaac |
41723355 |
T |
|
| Q |
525 |
aaataaggggaaaaa-ccacgggggcaagagtagaaaactttcactaagtggaagaaattacagggac-ctctctaaatacaaggagagtacaattacca |
622 |
Q |
| |
|
||||||||||||||| |||||||| |||||||||| ||||||||||||||||||||||||||||| | |||||||| |||||||||||||||| ||||| |
|
|
| T |
41723354 |
aaataaggggaaaaaaccacgggg-caagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaaatacca |
41723256 |
T |
|
| Q |
623 |
ctctctcttataaataggagaatacaaactaacacaaactaggagaaacctcacagggagaaactaatttt-ctctctatatttttt |
708 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||| |
|
|
| T |
41723255 |
ctctctcttataaataggagaatactaactaacacaaactaggagaaacctcaca-ggagaaactatttttcctctctatatttttt |
41723170 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 426 - 708
Target Start/End: Complemental strand, 34360273 - 34359990
Alignment:
| Q |
426 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaaccccttaaca |
525 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| |
|
|
| T |
34360273 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtagaaacccctcaaca |
34360174 |
T |
|
| Q |
526 |
aataaggggaaaaa-ccacgggggcaagagtagaaaactttcactaagtggaagaaattacagggac-ctctctaaatacaaggagagtacaattaccac |
623 |
Q |
| |
|
|||||||||||||| |||||||| |||||||||| ||||||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||| |
|
|
| T |
34360173 |
aataaggggaaaaaaccacgggg-caagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaattaccac |
34360075 |
T |
|
| Q |
624 |
tctctcttataaataggagaatacaaactaacacaaactaggagaaacctcacagggagaaactaa-ttttctctctatatttttt |
708 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||| |||||| ||||||||||| ||||||||||||||||||| |
|
|
| T |
34360074 |
tctctcttataaataggagaatactaactaacacaaactaggagaaatctcaca-ggagaaactaatttttctctctatatttttt |
34359990 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 426 - 708
Target Start/End: Complemental strand, 41718727 - 41718444
Alignment:
| Q |
426 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaaccccttaaca |
525 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
41718727 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
41718628 |
T |
|
| Q |
526 |
aataaggggaaaaa-ccacgggggcaagagtagaaaactttcactaagtggaagaaattacagggac-ctctctaaatacaaggagagtacaattaccac |
623 |
Q |
| |
|
|||||||||||||| |||||||| |||||||||| ||||||||||||||||||||||||||||| | |||||||| |||||||||||||||| |||||| |
|
|
| T |
41718627 |
aataaggggaaaaaaccacgggg-caagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaaataccac |
41718529 |
T |
|
| Q |
624 |
tctctcttataaataggagaatacaaactaacacaaactaggagaaacctcacagggagaaactaatttt-ctctctatatttttt |
708 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||| |
|
|
| T |
41718528 |
tctctcttataaataggagaatactaactaacacaaactaggagaaacctcaca-ggagaaactatttttcctctctatatttttt |
41718444 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 425 - 707
Target Start/End: Original strand, 29585299 - 29585582
Alignment:
| Q |
425 |
gtgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaaccccttaac |
524 |
Q |
| |
|
|||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
29585299 |
gtgttaggtatcagagtaacaaaatattatcatgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaac |
29585398 |
T |
|
| Q |
525 |
aaataagggg-aaaaaccacgggggcaagagtagaaaactttcactaagtggaagaaattacagggac-ctctctaaatacaaggagagtacaattacca |
622 |
Q |
| |
|
|||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||| | |||||||| ||||| |||||||||||||||| |
|
|
| T |
29585399 |
aaataaggggaaaaaaccac-ggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaagagagtacaattacca |
29585497 |
T |
|
| Q |
623 |
ctctctcttataaataggagaatacaaactaacacaaactaggagaaacctcacagggagaaactaa-ttttctctctatattttt |
707 |
Q |
| |
|
||||||||||||||||||||||||| |||||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||| |
|
|
| T |
29585498 |
ctctctcttataaataggagaatactaactaatacaaactaggagaaacctcaca-ggagaaactaatttttctctctatattttt |
29585582 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 445 - 708
Target Start/End: Complemental strand, 34352546 - 34352282
Alignment:
| Q |
445 |
aaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaaccccttaacaaataaggggaaaaa-ccac |
543 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| |
|
|
| T |
34352546 |
aaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccac |
34352447 |
T |
|
| Q |
544 |
gggggcaagagtagaaaactttcactaagtggaagaaattacagggac-ctctctaaatacaaggagagtacaattaccactctctcttataaataggag |
642 |
Q |
| |
|
|||| |||||||||| ||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34352446 |
gggg-caagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaattaccactctctcttataaataggag |
34352348 |
T |
|
| Q |
643 |
aatacaaactaacacaaactaggagaaacctcacagggagaaactaa-ttttctctctatatttttt |
708 |
Q |
| |
|
||||| |||||||||||||||||||||| |||||| ||||||||||| ||||||||||||||||||| |
|
|
| T |
34352347 |
aatactaactaacacaaactaggagaaatctcaca-ggagaaactaatttttctctctatatttttt |
34352282 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 214; Significance: 1e-117; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 426 - 708
Target Start/End: Original strand, 9439372 - 9439655
Alignment:
| Q |
426 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaaccccttaaca |
525 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
9439372 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
9439471 |
T |
|
| Q |
526 |
aataagggg-aaaaaccacgggggcaagagtagaaaactttcactaagtggaagaaattacagggac-ctctctaaatacaaggagagtacaattaccac |
623 |
Q |
| |
|
||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||| | |||||||| |||||||||||||||| |||||| |
|
|
| T |
9439472 |
aataaggggaaaaaaccac-ggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaaataccac |
9439570 |
T |
|
| Q |
624 |
tctctcttataaataggagaatacaaactaacacaaactaggagaaacctcacagggagaaactaatttt-ctctctatatttttt |
708 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||| |
|
|
| T |
9439571 |
tctctcttataaataggagaatactaactaacacaaactaggagaaacctcaca-ggagaaactatttttcctctctatatttttt |
9439655 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 426 - 708
Target Start/End: Original strand, 9444092 - 9444375
Alignment:
| Q |
426 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaaccccttaaca |
525 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
9444092 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
9444191 |
T |
|
| Q |
526 |
aataagggg-aaaaaccacgggggcaagagtagaaaactttcactaagtggaagaaattacagggac-ctctctaaatacaaggagagtacaattaccac |
623 |
Q |
| |
|
||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||| | |||||||| |||||||||||||||| |||||| |
|
|
| T |
9444192 |
aataaggggaaaaaaccac-ggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaaataccac |
9444290 |
T |
|
| Q |
624 |
tctctcttataaataggagaatacaaactaacacaaactaggagaaacctcacagggagaaactaatttt-ctctctatatttttt |
708 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||| |
|
|
| T |
9444291 |
tctctcttataaataggagaatactaactaacacaaactaggagaaacctcaca-ggagaaactatttttcctctctatatttttt |
9444375 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 443 - 499
Target Start/End: Complemental strand, 4799371 - 4799315
Alignment:
| Q |
443 |
acaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacaca |
499 |
Q |
| |
|
||||||||||||||| | |||||||||||||| |||||||||| || |||||||||| |
|
|
| T |
4799371 |
acaaaatattatcacactgctaaaataagagatgagaaaagagaaattgaacacaca |
4799315 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 205; Significance: 1e-112; HSPs: 14)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 435 - 708
Target Start/End: Original strand, 5198664 - 5198938
Alignment:
| Q |
435 |
ccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaaccccttaacaaataagggg |
534 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
5198664 |
ccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataagggg |
5198763 |
T |
|
| Q |
535 |
-aaaaaccacgggggcaagagtagaaaactttcactaagtggaagaaattacagggac-ctctctaaatacaaggagagtacaattaccactctctctta |
632 |
Q |
| |
|
||||||||| |||||||||||||| ||||||||||||||||||||||||||||| | |||||||| |||||||||||||||| ||||||||||||||| |
|
|
| T |
5198764 |
aaaaaaccac-ggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaaataccactctctctta |
5198862 |
T |
|
| Q |
633 |
taaataggagaatacaaactaacacaaactaggagaaacctcacagggagaaactaatttt-ctctctatatttttt |
708 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||| |
|
|
| T |
5198863 |
taaataggagaatactaactaacacaaactaggagaaacctcaca-ggagaaactatttttcctctctatatttttt |
5198938 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 137; E-Value: 4e-71
Query Start/End: Original strand, 437 - 675
Target Start/End: Complemental strand, 15603183 - 15602944
Alignment:
| Q |
437 |
agagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaaccccttaacaaataaggggaa |
536 |
Q |
| |
|
||||||| |||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
15603183 |
agagtaagaaaatattatcacgcaattgaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaa |
15603084 |
T |
|
| Q |
537 |
aaa-ccacgggggcaagagtagaaaactttcactaagtggaagaaattacagggac-ctctctaaatacaaggagagtacaattaccactctctcttata |
634 |
Q |
| |
|
||| |||||||| |||||||||| |||||||||||||| |||||||||||| | | |||||||||| || |||| |||||||||||| ||| |||| || |
|
|
| T |
15603083 |
aaaaccacgggg-caagagtagagaactttcactaagtagaagaaattacaagacctctctctaaatgcatggagtgtacaattaccattctatcttgta |
15602985 |
T |
|
| Q |
635 |
aataggagaatacaaactaacacaaactaggagaaacctca |
675 |
Q |
| |
|
||||||||||||| ||||||||| |||| ||||||||||| |
|
|
| T |
15602984 |
aataggagaatactaactaacacttactaagagaaacctca |
15602944 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 426 - 588
Target Start/End: Complemental strand, 825796 - 825633
Alignment:
| Q |
426 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaaccccttaaca |
525 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| |
|
|
| T |
825796 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaaccactcaaca |
825697 |
T |
|
| Q |
526 |
aataagggga--aaaaccacgggggcaagagtagaaaactttcactaagtggaagaaattacagg |
588 |
Q |
| |
|
|||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
825696 |
aataaggggaaaaaaaccac-ggggcaagagtagagaactttcactaagtggaagaaattacagg |
825633 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 426 - 588
Target Start/End: Complemental strand, 830452 - 830289
Alignment:
| Q |
426 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaaccccttaaca |
525 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
830452 |
tgttaggtaccagagtaacaaaatattatcacgcagttaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
830353 |
T |
|
| Q |
526 |
aataagggga--aaaaccacgggggcaagagtagaaaactttcactaagtggaagaaattacagg |
588 |
Q |
| |
|
|||||||||| |||||||| ||||||||||| || ||||||||||||||||||||||||||||| |
|
|
| T |
830352 |
aataaggggaaaaaaaccac-ggggcaagagtggagaactttcactaagtggaagaaattacagg |
830289 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 433 - 695
Target Start/End: Complemental strand, 28716070 - 28715814
Alignment:
| Q |
433 |
taccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaaccccttaacaaataagg |
532 |
Q |
| |
|
||||||||||||||||||||||||| || ||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||| | |||||||| |
|
|
| T |
28716070 |
taccagagtaacaaaatattatcacacatttaaaataagagacgacaaaagaggaattgaacacacaata-tttacgtggaaacccctcattaaataagg |
28715972 |
T |
|
| Q |
533 |
ggaaaaaccacgggggcaagagtagaaaactttcactaagtggaagaaattacagg-gacctctctaaatacaaggagagtacaattaccactctctctt |
631 |
Q |
| |
|
||||||||||| | | |||| |||| ||||||||| ||||||||||||||||||| | |||||||||| ||||||||||||||||||||| | || | |
|
|
| T |
28715971 |
ggaaaaaccacaagag-aagaatagagaactttcacaaagtggaagaaattacaggacatctctctaaatgcaaggagagtacaattaccaccgtttcct |
28715873 |
T |
|
| Q |
632 |
ataaataggagaatacaaactaacacaaactaggagaaacctcacagggagaaactaattttct |
695 |
Q |
| |
|
|||||||||||||| |||||||| | ||||||||||||| ||| ||||||||| |||||| |
|
|
| T |
28715872 |
ataaataggagaat----actaacactacctaggagaaaccttaca-agagaaactatttttct |
28715814 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 435 - 586
Target Start/End: Original strand, 30396920 - 30397070
Alignment:
| Q |
435 |
ccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaaccccttaacaaataagggg |
534 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| ||| ||||||||| |||||||||||| |
|
|
| T |
30396920 |
ccagagtagcaaaatattatcacgcagctaaaataagagacgagaaaagacgaactgaacacaca-tatttt-cgttgaaacccctcaacaaataaggga |
30397017 |
T |
|
| Q |
535 |
aaaaac-cacgggggcaagagtagaaaacttt-cactaagtggaagaaattaca |
586 |
Q |
| |
|
||||| ||| ||| | |||||||| |||||| ||||||||||||||||||||| |
|
|
| T |
30397018 |
aaaaaatcacaggg-cgagagtagagaacttttcactaagtggaagaaattaca |
30397070 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 426 - 586
Target Start/End: Original strand, 31592910 - 31593068
Alignment:
| Q |
426 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaaccccttaaca |
525 |
Q |
| |
|
|||| |||| || ||||||| ||||||||||| ||| || |||||||||||||||||||||||| |||| |||||| |||||||||||| | || || | |
|
|
| T |
31592910 |
tgttgggtatcaaagtaacataatattatcacacagatagaataagagacgagaaaagaggaacataacatacaataatttacgtggaaatctctcaata |
31593009 |
T |
|
| Q |
526 |
aataaggggaaaaaccacgggggcaagagtagaaaactttcactaagtggaagaaattaca |
586 |
Q |
| |
|
|||||| ||||||||| | ||||||||| |||||||||||| | ||||||||||| |
|
|
| T |
31593010 |
aataagaaaaaaaaccac--agataagagtagagaactttcactaaccgaaagaaattaca |
31593068 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 522 - 647
Target Start/End: Complemental strand, 8004291 - 8004167
Alignment:
| Q |
522 |
aacaaataaggggaaaaaccacgggggcaagagtagaaaactttcactaagtggaagaaattacagggacctctct--aaatacaaggagagtacaatta |
619 |
Q |
| |
|
|||||||||| |||||||| |||||| | || ||||||||||||||| | |||||||||||| | |||||||| |||| ||| |||||||||||| |
|
|
| T |
8004291 |
aacaaataagaggaaaaacaacggggt-atgactagaaaactttcactgaatggaagaaattataaa-acctctctttaaatgtaagaagagtacaatta |
8004194 |
T |
|
| Q |
620 |
ccactctctcttataaataggagaatac |
647 |
Q |
| |
|
| |||||||||||||||||||||||||| |
|
|
| T |
8004193 |
c-actctctcttataaataggagaatac |
8004167 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 638 - 707
Target Start/End: Complemental strand, 830291 - 830220
Alignment:
| Q |
638 |
aggagaatacaaac--taacacaaactaggagaaacctcacagggagaaactaa-ttttctctctatattttt |
707 |
Q |
| |
|
|||||||||||||| |||||| | ||||||||||||||||| ||||||||||| |||||||||||||||||| |
|
|
| T |
830291 |
aggagaatacaaacactaacactacctaggagaaacctcaca-ggagaaactaatttttctctctatattttt |
830220 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 495 - 645
Target Start/End: Original strand, 13843865 - 13844014
Alignment:
| Q |
495 |
acacaatattttacgtggaaaccccttaacaaataaggggaaaaaccacgggggcaagagtagaaaactttcactaagtggaagaaattacagggacc-t |
593 |
Q |
| |
|
||||||||||| |||||||||||||| ||||||||||| |||||| | || || |||| | || ||||| |||||||||||||||||||| || | |
|
|
| T |
13843865 |
acacaatattt-acgtggaaacccctcaacaaataaggagaaaaattataggttaaa-agtatagaattttcattaagtggaagaaattacaggacccct |
13843962 |
T |
|
| Q |
594 |
ctctaaatacaaggagagtacaattaccactctctcttataaataggagaat |
645 |
Q |
| |
|
| |||||||||| ||| || |||||||||||| | ||| |||||||||||| |
|
|
| T |
13843963 |
ttataaatacaagaagaataaaattaccactctattttaaaaataggagaat |
13844014 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 638 - 707
Target Start/End: Complemental strand, 825635 - 825564
Alignment:
| Q |
638 |
aggagaatacaaac--taacacaaactaggagaaacctcacagggagaaactaatttt-ctctctatattttt |
707 |
Q |
| |
|
|||||||||||||| |||||| | |||||||||||||| |||| ||||||||||||| |||||||||||||| |
|
|
| T |
825635 |
aggagaatacaaacactaacactacctaggagaaacctcgcagg-agaaactaatttttctctctatattttt |
825564 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 446 - 506
Target Start/End: Original strand, 12175768 - 12175828
Alignment:
| Q |
446 |
aaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatatttt |
506 |
Q |
| |
|
||||||||||||||| ||||||||| ||| || |||| || || ||||||||||||||||| |
|
|
| T |
12175768 |
aaatattatcacgcaactaaaataaaagatgataaaaaagaaattgaacacacaatatttt |
12175828 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 426 - 647
Target Start/End: Original strand, 13840240 - 13840456
Alignment:
| Q |
426 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaaccccttaaca |
525 |
Q |
| |
|
|||| ||||||||| |||||||||||||||||| | || ||||| ||| |||||| ||||||| || |||||||| ||||| || || ||| |||| |
|
|
| T |
13840240 |
tgttgggtaccagaataacaaaatattatcacgtaattataataaaagatgagaaaggaggaaccga--acacaata-tttacatgagaattcctcaaca |
13840336 |
T |
|
| Q |
526 |
aataaggggaaaaaccacgggggcaagagtagaaaactttcactaagtggaagaaattacagggac-ctctctaaatacaaggagagtacaattaccact |
624 |
Q |
| |
|
|| |||||| ||||| || |||||||||||||| ||| || |||| || |||||||| | ||||||||||| ||||||||||||||||| | | |
|
|
| T |
13840337 |
aacaagggggaaaac--atggagcaagagtagaaaatttttaccaagt-aaaaaaattacaaaacctctctctaaatataaggagagtacaattacaatt |
13840433 |
T |
|
| Q |
625 |
ctctcttataaataggagaatac |
647 |
Q |
| |
|
|||||||| ||||| ||||||| |
|
|
| T |
13840434 |
ctctcttaaaaataaaagaatac |
13840456 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 441 - 490
Target Start/End: Original strand, 9358158 - 9358207
Alignment:
| Q |
441 |
taacaaaatattatcacgcagctaaaataagagacgagaaaagaggaact |
490 |
Q |
| |
|
|||| ||||||||| |||||||||||| || ||||||||||||| ||||| |
|
|
| T |
9358158 |
taaccaaatattattacgcagctaaaacaacagacgagaaaagaagaact |
9358207 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 144; Significance: 2e-75; HSPs: 7)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 431 - 707
Target Start/End: Original strand, 16183636 - 16183904
Alignment:
| Q |
431 |
ggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaaccccttaacaaataa |
530 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
16183636 |
ggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataa |
16183735 |
T |
|
| Q |
531 |
gggg-aaaaaccacgggggcaagagtagaaaactttcactaagtggaaga-aattacagggac-ctctctaaatacaaggagagtacaattaccactctc |
627 |
Q |
| |
|
|||| ||||||||| |||||||||||||| |||||||||||||||||||| ||||||| | | |||||||||||||||||||| ||||||| ||||| |
|
|
| T |
16183736 |
ggggaaaaaaccac-ggggcaagagtagagaactttcactaagtggaagacaattacaagacctctctctaaatacaaggagagacaaattacc-ctctc |
16183833 |
T |
|
| Q |
628 |
tcttataaataggagaatacaaactaacacaaactaggagaaacctcacagggagaaacta-attttctctctatattttt |
707 |
Q |
| |
|
|||| |||||||||||||| ||| |||||||||||||||||| |||||||||| |||| |||||||||||||| |
|
|
| T |
16183834 |
tctt-gaaataggagaatactaac--------actaggagaaacctcaca-ggagaaactatatttcctctctatattttt |
16183904 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 426 - 707
Target Start/End: Complemental strand, 30235339 - 30235053
Alignment:
| Q |
426 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaaccccttaaca |
525 |
Q |
| |
|
|||| |||||||||||| ||||||||||| || |||||||||||| | | |||||||||||||||||||||||||||||| |||||||||||||| ||| |
|
|
| T |
30235339 |
tgttgggtaccagagtagcaaaatattattacacagctaaaataaaaaatgagaaaagaggaactgaacacacaatattt-acgtggaaacccctcaacg |
30235241 |
T |
|
| Q |
526 |
aataaggggaaaaa--ccacgggggcaagagtagaaaactttcactaagtggaagaaattacagggacctctct---aaatacaaggagagtacaattac |
620 |
Q |
| |
|
|||||||||||||| ||||||| |||||||||||||||||| ||| | |||||||||||||| |||||||| | || ||||||||||||||||| |
|
|
| T |
30235240 |
aataaggggaaaaaaaccacgggat-aagagtagaaaactttcaataactagaagaaattacagg-acctctctcctatttataaggagagtacaattac |
30235143 |
T |
|
| Q |
621 |
cactctctcttataaataggagaatacaa--actaacacaaactaggagaaacctcacagggagaaactaa-ttttctctctatattttt |
707 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||| | || ||||||||||| | ||||||||||| |||||||||||||||||| |
|
|
| T |
30235142 |
cactctctcttataaataggagaatacaaacactaacactacgtaagagaaacctcataaggagaaactaatttttctctctatattttt |
30235053 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 426 - 647
Target Start/End: Original strand, 8139964 - 8140183
Alignment:
| Q |
426 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaaccccttaaca |
525 |
Q |
| |
|
|||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||| ||||||| |||| |||||||||||| |||| |
|
|
| T |
8139964 |
tgttgggtaccagagtaacaaaatattatcacacagctaaaataagagatgagaaaagagaaactgaacgcacaata-tttatgtggaaacccctcaaca |
8140062 |
T |
|
| Q |
526 |
aataagggga-aaaaccacgggggcaagagtagaaaactttcactaagtggaagaaattacagggac-ctctctaaatacaaggagagtacaattaccac |
623 |
Q |
| |
|
|||||||||| ||||||| |||| |||| ||||||||||||||| |||||||||||||| | | | |||||| ||||||||||||| ||||||| | |
|
|
| T |
8140063 |
aataaggggagaaaacca-tggggtaagattagaaaactttcactcagtggaagaaattataagacctctctcttaatacaaggagagacaaattacc-c |
8140160 |
T |
|
| Q |
624 |
tctctcttataaataggagaatac |
647 |
Q |
| |
|
|||||||| |||||||||||||| |
|
|
| T |
8140161 |
tctctctt-gaaataggagaatac |
8140183 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 426 - 611
Target Start/End: Original strand, 8138460 - 8138645
Alignment:
| Q |
426 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaaccccttaaca |
525 |
Q |
| |
|
|||| |||| ||||||| |||| |||||||||||||||||||||||||||||||||||| |||| |||||||| || ||| ||||||||||||||||| |
|
|
| T |
8138460 |
tgttgggtagcagagtatcaaagtattatcacgcagctaaaataagagacgagaaaagaaaaacttaacacacagta-attatgtggaaaccccttaaca |
8138558 |
T |
|
| Q |
526 |
aataagggga-aaaaccacgggggcaagagtagaaaactttcactaagtggaagaaattacagggacct--ctctaaatacaaggagag |
611 |
Q |
| |
|
|| ||||||| |||||||| | ||||||| |||| |||||||||||| |||||||||||||| ||||| |||||||||||||||||| |
|
|
| T |
8138559 |
aacaaggggagaaaaccac-gaggcaagattagagaactttcactaaatggaagaaattaca-agacctccctctaaatacaaggagag |
8138645 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 439 - 584
Target Start/End: Original strand, 5102606 - 5102749
Alignment:
| Q |
439 |
agtaacaaaatattatcacgcagctaaaataagagacgag-aaaagaggaactgaacacacaatattttacgtggaaaccccttaacaaataaggggaaa |
537 |
Q |
| |
|
||||||||||||||||||| || ||||||||| ||| ||| |||||||| ||| || ||| |||| ||||| | |||| |||| |||||||||||||||| |
|
|
| T |
5102606 |
agtaacaaaatattatcactcaactaaaataaaagatgagaaaaagagggactaaatacataata-tttacat-gaaaaccctcaacaaataaggggaaa |
5102703 |
T |
|
| Q |
538 |
aaccacgggggcaagagtagaaaactttcactaagtggaagaaatta |
584 |
Q |
| |
|
||||| || ||||||||||| |||||| ||||||||| |||||||| |
|
|
| T |
5102704 |
aacca-tggagcaagagtagataacttttactaagtgggagaaatta |
5102749 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 426 - 520
Target Start/End: Original strand, 36528415 - 36528508
Alignment:
| Q |
426 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccct |
520 |
Q |
| |
|
|||| |||| |||||||||||| || || ||||| ||||||||||||| ||||| ||||||| ||||||||||||| ||||||||||||||||| |
|
|
| T |
36528415 |
tgttgggtatcagagtaacaaagtaaaattacgcaactaaaataagagatgagaatagaggaattgaacacacaata-tttacgtggaaacccct |
36528508 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 553 - 646
Target Start/End: Original strand, 31233730 - 31233821
Alignment:
| Q |
553 |
agtagaaaactttcactaagtggaagaaattacagggacctctctaaatacaaggagagtacaattaccactctctcttataaataggagaata |
646 |
Q |
| |
|
|||||| || |||||| |||| ||||||||||| || ||||||||||| ||| |||||||||||| |||||| ||||| |||||| |||||| |
|
|
| T |
31233730 |
agtagagaattttcaccaagttaaagaaattacatgg-cctctctaaat-caaagagagtacaattgtcactctttcttaaaaatagaagaata |
31233821 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0074 (Bit Score: 132; Significance: 3e-68; HSPs: 1)
Name: scaffold0074
Description:
Target: scaffold0074; HSP #1
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 425 - 707
Target Start/End: Original strand, 27225 - 27499
Alignment:
| Q |
425 |
gtgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaaccccttaac |
524 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||| |
|
|
| T |
27225 |
gtgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagagaaactgaacacacaatactttacgtggaaacccctcaac |
27324 |
T |
|
| Q |
525 |
aaataagggg-aaaaaccacgggggcaagagtagaaaactttcactaagtggaaga-aattacagggac--ctctctaaatacaaggagagtacaattac |
620 |
Q |
| |
|
|||||||||| ||||||||| |||||||||||||| |||||||||||||||||||| ||||||| || |||||||||||||||||||| |||||| |
|
|
| T |
27325 |
aaataaggggaaaaaaccac-ggggcaagagtagagaactttcactaagtggaagacaattaca-atacttctctctaaatacaaggagagacaaattac |
27422 |
T |
|
| Q |
621 |
cactctctcttataaataggagaatacaaactaacacaaactaggagaaacctcacagggagaaacta-attttctctctatattttt |
707 |
Q |
| |
|
|| |||||||| ||||||| |||||| ||| |||||||||||||||||| |||||||||| |||| |||||||||||||| |
|
|
| T |
27423 |
ca-tctctctt-gaaataggtgaatactaac--------actaggagaaacctcaca-ggagaaactatatttcctctctatattttt |
27499 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 122; Significance: 3e-62; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 424 - 707
Target Start/End: Complemental strand, 46191548 - 46191275
Alignment:
| Q |
424 |
tgtgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaaccccttaa |
523 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || |
|
|
| T |
46191548 |
tgtgttaggaaccagagtaacaaaatattatcatgcagctaaaataagagacgagaaaagaggaactgaa--cacaatattttacgtggaaacccctcaa |
46191451 |
T |
|
| Q |
524 |
caaataagggg-aaaaaccacgggggcaagagtagaaaactttcactaagtggaaga-aattacagggac--ctctctaaatacaaggagagtacaatta |
619 |
Q |
| |
|
||||||||||| ||||||||| ||| |||||||||| |||||||||||||||||||| ||||||| ||| ||||||||||| |||||||| ||||| |
|
|
| T |
46191450 |
caaataaggggaaaaaaccac-gggacaagagtagagaactttcactaagtggaagacaattaca-agacttctctctaaatagaaggagagacaaatta |
46191353 |
T |
|
| Q |
620 |
ccactctctcttataaataggagaatacaaactaacacaaactaggagaaacctcacagggagaaacta-attttctctctatattttt |
707 |
Q |
| |
|
|| ||||||||| |||||||||||||| ||| |||||||||||||||||| |||||||||| |||| |||||||||||||| |
|
|
| T |
46191352 |
cc-ctctctctt-gaaataggagaatactaac--------actaggagaaacctcaca-ggagaaactatatttcctctctatattttt |
46191275 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 431 - 611
Target Start/End: Original strand, 30697120 - 30697300
Alignment:
| Q |
431 |
ggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaaccccttaacaaataa |
530 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||| ||||||||||||||||| ||||||||| |
|
|
| T |
30697120 |
ggtactagagtaacaaaatattatcacgcagctaacataagagacgagaaaagaggaacttaacacaaaata-tttacgtggaaacccctcaacaaataa |
30697218 |
T |
|
| Q |
531 |
ggggaaaaa-ccacgggggcaagagtagaaaactttcactaagtggaagaaattacagggacctc--tctaaatacaaggagag |
611 |
Q |
| |
|
||||||||| |||| | |||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||| |
|
|
| T |
30697219 |
ggggaaaaagccac-gtggcaagagtagagaactttcactaagtggaagaaattaca-agacctctttctaaatacaaggagag |
30697300 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 426 - 611
Target Start/End: Complemental strand, 4130401 - 4130215
Alignment:
| Q |
426 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaaccccttaaca |
525 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| | |||||||||||| |||| |||| |
|
|
| T |
4130401 |
tgttaggtacttgagtaacaaaatattatcacgcaactaaaataagtgacgagaaaagaggaactgaacacacaa-aatttacgtggaaatccctcaaca |
4130303 |
T |
|
| Q |
526 |
aat-aaggggaaaaaccacgggggcaagagtagaaaactttcactaagtggaaga-aattacagggac--ctctctaaatacaaggagag |
611 |
Q |
| |
|
||| ||||| ||||||||| |||||||||||||| |||||||||||||||||||| ||||||| ||| |||||||||||||||||||| |
|
|
| T |
4130302 |
aataaagggaaaaaaccac-ggggcaagagtagagaactttcactaagtggaagataattaca-agacttctctctaaatacaaggagag |
4130215 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 426 - 530
Target Start/End: Complemental strand, 364786 - 364683
Alignment:
| Q |
426 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaaccccttaaca |
525 |
Q |
| |
|
|||| ||||| ||||||| |||||| ||||| || |||||||| ||| ||||||| ||||| || ||||||||| ||||||| ||| ||||||||| |
|
|
| T |
364786 |
tgtttggtacgagagtaataaaataatatcatacaattaaaataatagatgagaaaaaaggaatcgaccacacaata-tttacgttgaatccccttaacc |
364688 |
T |
|
| Q |
526 |
aataa |
530 |
Q |
| |
|
||||| |
|
|
| T |
364687 |
aataa |
364683 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University