View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF5256_high_23 (Length: 239)
Name: NF5256_high_23
Description: NF5256
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5256_high_23 |
 | |
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| [»] chr5 (2 HSPs) |
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| [»] chr2 (8 HSPs) |
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| [»] chr3 (6 HSPs) |
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| [»] chr8 (6 HSPs) |
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| [»] chr7 (5 HSPs) |
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| [»] chr1 (6 HSPs) |
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| [»] scaffold0913 (1 HSPs) |
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| [»] scaffold0898 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 198; Significance: 1e-108; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 17 - 239
Target Start/End: Complemental strand, 17237993 - 17237769
Alignment:
| Q |
17 |
aacaaagaaacaacagagtgtggaatgaggtaattgatgc--tccattttatattgttgagagagaaaaagttatgcttcatgattggcaagatgcacgt |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||||||||||||| |||||||||||| |
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|
| T |
17237993 |
aacaaagaaacaacagagtgtggaatgaggtaattgatgcgatccattttatgttgttgagagagcaaaagttatgcttcatgattgacaagatgcacgt |
17237894 |
T |
|
| Q |
115 |
aggatttgtaatacatcttgtgcacatccacgacaagaaggaaatgtgaaatggatcaaaccagctgaaggaagatttaagtgcaatattgttgcttctt |
214 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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|
| T |
17237893 |
aggatttgtaatacatcttgtgcacatccacgacaagaaggaaatgtgaaatggatcaaaccagctgaaggaagatttaaatgcaatattgttgcttctt |
17237794 |
T |
|
| Q |
215 |
tctcctagctttctaatagagtggg |
239 |
Q |
| |
|
||||||||||||||||||||||||| |
|
|
| T |
17237793 |
tctcctagctttctaatagagtggg |
17237769 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 32296333 - 32296203
Alignment:
| Q |
87 |
tatgcttcatgattggcaagatgcacgtaggatttgtaatacatcttgtgcacatccacgacaagaaggaaatgtgaaatggatcaaaccagctgaagga |
186 |
Q |
| |
|
|||||||||||||||||||||||||| |||| || ||||||||||||||||| | || |||||||| | ||||||||||||||||||||||||||||||| |
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|
| T |
32296333 |
tatgcttcatgattggcaagatgcacataggtttcgtaatacatcttgtgcatagccgcgacaagatgaaaatgtgaaatggatcaaaccagctgaagga |
32296234 |
T |
|
| Q |
187 |
agatttaagtgcaatattgttgcttctttct |
217 |
Q |
| |
|
||||||||||||||||||| ||||||||||| |
|
|
| T |
32296233 |
agatttaagtgcaatattgatgcttctttct |
32296203 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 175; Significance: 2e-94; HSPs: 8)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 17 - 239
Target Start/End: Original strand, 5848702 - 5848924
Alignment:
| Q |
17 |
aacaaagaaacaacagagtgtggaatgaggtaattgatgctccattttatattgttgagagagaaaaagttatgcttcatgattggcaagatgcacgtag |
116 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||| ||||| |||| ||||||| |||||||||||||||||||||||||||||||| ||| |
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|
| T |
5848702 |
aacaaagaaacaacagagtgtgaaatgaggtaattgatgctccagtttatgttgtcgagagagcaaaagttatgcttcatgattggcaagatgcacatag |
5848801 |
T |
|
| Q |
117 |
gatttgtaatacatcttgtgcacatccacgacaagaaggaaatgtgaaatggatcaaaccagctgaaggaagatttaagtgcaatattgttgcttctttc |
216 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
5848802 |
gatttgtaatacatcttgtgcacatttgcgacaagaaggaaatgtgaaatggatcaaactagctgaaggaagatttaagtgcaatattgatgcttctttc |
5848901 |
T |
|
| Q |
217 |
tcctagctttctaatagagtggg |
239 |
Q |
| |
|
||| ||||||||||||||||||| |
|
|
| T |
5848902 |
tcccagctttctaatagagtggg |
5848924 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 17 - 239
Target Start/End: Complemental strand, 18580066 - 18579845
Alignment:
| Q |
17 |
aacaaagaaacaacagagtgtggaatgaggtaattgatgctccattttatattgttgagagagaaaaagttatgcttcatgattggcaagatgcacgtag |
116 |
Q |
| |
|
||||||||| ||||| |||||||| ||||||||||||| ||| | ||||| |||| ||| |||||||||||||||||||||||||||||||||||| |
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|
| T |
18580066 |
aacaaagaatcaacaaagtgtggagtgaggtaattgatactcaagtttatgttgt--ggagcacaaaagttatgcttcatgattggcaagatgcacgtag |
18579969 |
T |
|
| Q |
117 |
gatttgta-atacatcttgtgcacatccacgacaagaaggaaatgtgaaatggatcaaaccagctgaaggaagatttaagtgcaatattgttgcttcttt |
215 |
Q |
| |
|
| || ||| ||||||||||| |||| | ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||||| |
|
|
| T |
18579968 |
gtttcgtatatacatcttgttcacagtcgcgacaagaaggaaatgtgaaatggatcaaaccagcgaaaggaagatttaaatgcaatattgatgcttcttt |
18579869 |
T |
|
| Q |
216 |
ctcctagctttctaatagagtggg |
239 |
Q |
| |
|
|||| ||||||||||||||||||| |
|
|
| T |
18579868 |
ctcccagctttctaatagagtggg |
18579845 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 17 - 184
Target Start/End: Complemental strand, 40492677 - 40492515
Alignment:
| Q |
17 |
aacaaagaaacaacagagtgtggaatgaggtaattgatgctccattttatattgttgagagagaaaaagttatgcttcatgattggcaagatgcacgtag |
116 |
Q |
| |
|
||||||||||||||||| || ||||||||||||||||||||||||| |||| |||||||| ||| |||||||| |||||||||||||||||||||| |
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|
| T |
40492677 |
aacaaagaaacaacagaatg-----tgaggtaattgatgctccattttatgttgtggagagagagaaaattatgcttaatgattggcaagatgcacgtag |
40492583 |
T |
|
| Q |
117 |
gatttgtaatacatcttgtgcacatccacgacaagaaggaaatgtgaaatggatcaaaccagctgaag |
184 |
Q |
| |
|
||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
40492582 |
gatttgtaatacaccttgtgcacatccgtgacaagaaggaaatgtgaaatggatcaaaccagctgaag |
40492515 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 17 - 239
Target Start/End: Complemental strand, 15746106 - 15745884
Alignment:
| Q |
17 |
aacaaagaaacaacagagtgtggaatgaggtaattgatgctccattttatattgttgagagagaaaaagttatgcttcatgattggcaagatgcacgtag |
116 |
Q |
| |
|
||||||||||||||| |||| |||||||||||||||| | | ||| |||||||||||| |||| |||| |||||| |||||||||||||||||| |
|
|
| T |
15746106 |
aacaaagaaacaacaacgtgtagaatgaggtaattgatattaaagcctatgttgttgagagagcaaaaactatgtttcatgcttggcaagatgcacgtag |
15746007 |
T |
|
| Q |
117 |
gatttgtaatacatcttgtgcacatccacgacaagaaggaaatgtgaaatggatcaaaccagctgaaggaagatttaagtgcaatattgttgcttctttc |
216 |
Q |
| |
|
| || ||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| ||||| |||| |
|
|
| T |
15746006 |
gtttcgtaatacttcttgtgcacagttgcgacaagaaggaaatgtgaaatggatcaaaccagttgaagggagatttaagtgcaatattgatgcttttttc |
15745907 |
T |
|
| Q |
217 |
tcctagctttctaatagagtggg |
239 |
Q |
| |
|
|| |||||||||||||||||| |
|
|
| T |
15745906 |
tctatgctttctaatagagtggg |
15745884 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 63 - 183
Target Start/End: Original strand, 19051246 - 19051366
Alignment:
| Q |
63 |
ttatattgttgagagagaaaaagttatgcttcatgattggcaagatgcacgtaggatttgtaatacatcttgtgcacatccacgacaagaaggaaatgtg |
162 |
Q |
| |
|
|||| |||||||||||| ||||||||||||||||||||| |||||||| |||||||||||||||||||||||| | || | ||||||||||||||||| |
|
|
| T |
19051246 |
ttatgttgttgagagagcaaaagttatgcttcatgattgacaagatgctcgtaggatttgtaatacatcttgttcgcagtcgtgacaagaaggaaatgtg |
19051345 |
T |
|
| Q |
163 |
aaatggatcaaaccagctgaa |
183 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
19051346 |
aaatggatcaaaccagctgaa |
19051366 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 17 - 238
Target Start/End: Complemental strand, 33171443 - 33171223
Alignment:
| Q |
17 |
aacaaagaaacaacagagtgtggaatgaggtaattgatgctccattttatattgttgagagagaaaaagttatgcttcatgattggcaagatgcacgtag |
116 |
Q |
| |
|
||||||||| ||||| ||||||||||| |||||||||| ||| | ||||| |||||||||||| |||| |||| |||||| ||| |||||||| | ||| |
|
|
| T |
33171443 |
aacaaagaagcaaca-agtgtggaatggggtaattgatactcaactttatgttgttgagagagtaaaaactatgtttcatggttgacaagatgctcatag |
33171345 |
T |
|
| Q |
117 |
gatttgtaatacatcttgtgcacatccacgacaagaaggaaatgtgaaatggatcaaaccagctgaaggaagatttaagtgcaatattgttgcttctttc |
216 |
Q |
| |
|
||||| ||||||| |||||||| | || |||||||| | | || ||||| | ||||||||| || ||| || |||||||| |||||||| || ||||||| |
|
|
| T |
33171344 |
gatttataatacaacttgtgcataaccgcgacaagacgaatatttgaaacgaatcaaaccaactaaagaaatatttaagtacaatattgatgtttctttc |
33171245 |
T |
|
| Q |
217 |
tcctagctttctaatagagtgg |
238 |
Q |
| |
|
||| | |||||||||||||||| |
|
|
| T |
33171244 |
tcccatctttctaatagagtgg |
33171223 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 204
Target Start/End: Original strand, 5509691 - 5509872
Alignment:
| Q |
17 |
aacaaagaaacaacagagtgtggaatgaggtaattgatgctccattttatattgttgagagagaaaaagttatgcttcatgattggcaagatgcacgtag |
116 |
Q |
| |
|
||||||||||||| ||||||||||||||||||| ||| ||| | ||||| |||||||||||| |||| |||| |||| ||||||||||| | |||| |
|
|
| T |
5509691 |
aacaaagaaacaa--gagtgtggaatgaggtaatagattctcaagtttatgttgttgagagagcaaaaactatgtttcagaattggcaagatataggtag |
5509788 |
T |
|
| Q |
117 |
gatttgtaatacatcttgtgcacatccacgacaagaaggaaatgtgaaatggatcaaaccagctgaaggaagatttaagtgcaatatt |
204 |
Q |
| |
|
||||||| |||||| ||| || | ||||||||| ||||||||||||||| |||| ||||||| |||||||||| ||||||||| |
|
|
| T |
5509789 |
gatttgtgatacatattg----caactctgacaagaagaaaatgtgaaatggataaaactagctgaaagaagatttaaatgcaatatt |
5509872 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 95 - 221
Target Start/End: Original strand, 36098451 - 36098576
Alignment:
| Q |
95 |
atgattggcaagatgcacgtaggatttgtaatacatcttgtgcacatccacgacaagaaggaaatgtgaaatggatcaaaccagctgaaggaagatttaa |
194 |
Q |
| |
|
||||||||||||||||||||||||||||||||| | ||||| || | |||||| | | | |||||||||||| |||||| ||||||| ||||||| |
|
|
| T |
36098451 |
atgattggcaagatgcacgtaggatttgtaatatactttgtgtgcagtcgcgacaa-acagtagtgtgaaatggattaaaccaagtgaaggatgatttaa |
36098549 |
T |
|
| Q |
195 |
gtgcaatattgttgcttctttctccta |
221 |
Q |
| |
|
|||||||||| || || ||||||||| |
|
|
| T |
36098550 |
gtgcaatattaatgtttttttctccta |
36098576 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 171; Significance: 6e-92; HSPs: 6)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 33 - 239
Target Start/End: Complemental strand, 52586159 - 52585953
Alignment:
| Q |
33 |
agtgtggaatgaggtaattgatgctccattttatattgttgagagagaaaaagttatgcttcatgattggcaagatgcacgtaggatttgtaatacatct |
132 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||| ||||||| |||||||||| || |||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
52586159 |
agtgtggaatgaggtaattgatgctccaatttatattgtcgagagagcaaaagttatgattgatgattggtaagatgcacgtaggatttgtaatacatct |
52586060 |
T |
|
| Q |
133 |
tgtgcacatccacgacaagaaggaaatgtgaaatggatcaaaccagctgaaggaagatttaagtgcaatattgttgcttctttctcctagctttctaata |
232 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| |
|
|
| T |
52586059 |
tgtgcacatccgcgacaagaaggaaatgtgaaatggatcaaaccagctgaaggaagatttaagtgcaatattgatgcttctttctcccagctttctaata |
52585960 |
T |
|
| Q |
233 |
gagtggg |
239 |
Q |
| |
|
||||||| |
|
|
| T |
52585959 |
gagtggg |
52585953 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 17 - 218
Target Start/End: Original strand, 53580858 - 53581059
Alignment:
| Q |
17 |
aacaaagaaacaacagagtgtggaatgaggtaattgatgctccattttatattgttgagagagaaaaagttatgcttcatgattggcaagatgcacgtag |
116 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||| ||| | ||||| |||| ||||||| ||||| |||||||||||||||||||||||||||||| |
|
|
| T |
53580858 |
aacaaagaaacaacaaagtgtggaatgaggtaattgatactcaagtttatgttgtggagagagcaaaagctatgcttcatgattggcaagatgcacgtag |
53580957 |
T |
|
| Q |
117 |
gatttgtaatacatcttgtgcacatccacgacaagaaggaaatgtgaaatggatcaaaccagctgaaggaagatttaagtgcaatattgttgcttctttc |
216 |
Q |
| |
|
| || | | ||||||||||| ||| || |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| |||||||||| |
|
|
| T |
53580958 |
gtttcgcattacatcttgtgtacagccgcgacaagaaggaaatgtgaaatgggtcaaaccagctcaaggaagatttaagtgcaatattgatgcttctttc |
53581057 |
T |
|
| Q |
217 |
tc |
218 |
Q |
| |
|
|| |
|
|
| T |
53581058 |
tc |
53581059 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 20 - 239
Target Start/End: Original strand, 20684977 - 20685196
Alignment:
| Q |
20 |
aaagaaacaacagagtgtggaatgaggtaattgatgctccattttatattgttgagagagaaaaagttatgcttcatgattggcaagatgcacgtaggat |
119 |
Q |
| |
|
|||||||||| | |||||||||||||||||||||| || | ||||| |||| ||||||| |||| ||||||||||||||||||||||||||||||| | |
|
|
| T |
20684977 |
aaagaaacaataaagtgtggaatgaggtaattgatattcaagtttatgttgtggagagagcaaaaactatgcttcatgattggcaagatgcacgtaggtt |
20685076 |
T |
|
| Q |
120 |
ttgtaatacatcttgtgcacatccacgacaagaaggaaatgtgaaatggatcaaaccagctgaaggaagatttaagtgcaatattgttgcttctttctcc |
219 |
Q |
| |
|
| ||||||||| ||||||||| | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| |
|
|
| T |
20685077 |
tcgtaatacattttgtgcacagtcgcaacaagaaggaaatgtgaaatggatcaaaccagctgaaggaagatttaagtgcaatattgatgtttctttctta |
20685176 |
T |
|
| Q |
220 |
tagctttctaatagagtggg |
239 |
Q |
| |
|
| ||||||||||||||||| |
|
|
| T |
20685177 |
caactttctaatagagtggg |
20685196 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 86 - 239
Target Start/End: Original strand, 4136022 - 4136175
Alignment:
| Q |
86 |
ttatgcttcatgattggcaagatgcacgtaggatttgtaatacatcttgtgcacatccacgacaagaaggaaatgtgaaatggatcaaaccagctgaagg |
185 |
Q |
| |
|
||||| ||||||||||||||||||| |||| ||||||||||| ||||||| |||| || |||||||||||||||||||||||| ||||| ||||||||| |
|
|
| T |
4136022 |
ttatgtttcatgattggcaagatgctcgtaagatttgtaatatatcttgtccacagccgtgacaagaaggaaatgtgaaatggaccaaacaagctgaagg |
4136121 |
T |
|
| Q |
186 |
aagatttaagtgcaatattgttgcttctttctcctagctttctaatagagtggg |
239 |
Q |
| |
|
|||||||||||| ||||||| | |||||||||||||||||||||||||||||| |
|
|
| T |
4136122 |
aagatttaagtgtaatattgatatttctttctcctagctttctaatagagtggg |
4136175 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 17 - 205
Target Start/End: Original strand, 8726460 - 8726644
Alignment:
| Q |
17 |
aacaaagaaacaacagagtgtggaatgaggtaattgatgctccattttatattgttgagagagaaaa-agttatgcttcatgattggcaagatgcacgta |
115 |
Q |
| |
|
|||||| ||||||||| ||| ||| ||||||||||||| || ||| | ||||||||||| |||| ||||||||||||||| |||||||||||||||| |
|
|
| T |
8726460 |
aacaaataaacaacag--tgttgaacgaggtaattgatgttcatgtttgtgttgttgagagaaaaaaaagttatgcttcatgactggcaagatgcacgta |
8726557 |
T |
|
| Q |
116 |
ggatttgtaatacatcttgtgcacatccacgacaagaaggaaatgtgaaatggatcaaaccagctgaaggaagatttaagtgcaatattg |
205 |
Q |
| |
|
||||||||||||||||| ||||||| ||| | | ||||||||||||||| ||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
8726558 |
ggatttgtaatacatctcgtgcacaaccatg---ataaggaaatgtgaaatagatcaaaccagctgaaggaagatttaagtgcaaaattg |
8726644 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 17 - 205
Target Start/End: Original strand, 9078347 - 9078531
Alignment:
| Q |
17 |
aacaaagaaacaacagagtgtggaatgaggtaattgatgctccattttatattgttgagagagaaaa-agttatgcttcatgattggcaagatgcacgta |
115 |
Q |
| |
|
|||||| ||||||||| ||| ||| ||||||||||||| || ||| | ||||||||||| |||| ||||||||||||||| |||||||||||||||| |
|
|
| T |
9078347 |
aacaaataaacaacag--tgttgaacgaggtaattgatgttcatgtttgtgttgttgagagaaaaaaaagttatgcttcatgactggcaagatgcacgta |
9078444 |
T |
|
| Q |
116 |
ggatttgtaatacatcttgtgcacatccacgacaagaaggaaatgtgaaatggatcaaaccagctgaaggaagatttaagtgcaatattg |
205 |
Q |
| |
|
||||||||||||||||| ||||||| ||| | | ||||||||||||||| ||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
9078445 |
ggatttgtaatacatctcgtgcacaaccatg---ataaggaaatgtgaaatagatcaaaccagctgaaggaagatttaagtgcaaaattg |
9078531 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 167; Significance: 1e-89; HSPs: 6)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 17 - 239
Target Start/End: Original strand, 10259998 - 10260220
Alignment:
| Q |
17 |
aacaaagaaacaacagagtgtggaatgaggtaattgatgctccattttatattgttgagagagaaaaagttatgcttcatgattggcaagatgcacgtag |
116 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||| ||||| ||||| |||| ||||||| ||||||||||||| |||||||||||||||||||||| |
|
|
| T |
10259998 |
aacaaagaaacaacaaagtgtggaatgaggtaattgatcctccagtttatgttgtcgagagagcaaaagttatgctttatgattggcaagatgcacgtag |
10260097 |
T |
|
| Q |
117 |
gatttgtaatacatcttgtgcacatccacgacaagaaggaaatgtgaaatggatcaaaccagctgaaggaagatttaagtgcaatattgttgcttctttc |
216 |
Q |
| |
|
|||||||||||||||||||||||| || |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||| |
|
|
| T |
10260098 |
gatttgtaatacatcttgtgcacaaccgcgacaagaaggaaatgtgaaattgatcaaaccagctgaaggaagatttaagtccaatattgatgcttctttc |
10260197 |
T |
|
| Q |
217 |
tcctagctttctaatagagtggg |
239 |
Q |
| |
|
||||| ||||||| ||||||||| |
|
|
| T |
10260198 |
tcctaactttctactagagtggg |
10260220 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 17 - 173
Target Start/End: Complemental strand, 17834711 - 17834555
Alignment:
| Q |
17 |
aacaaagaaacaacagagtgtggaatgaggtaattgatgctccattttatattgttgagagagaaaaagttatgcttcatgattggcaagatgcacgtag |
116 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||| | ||| |||| ||||||| |||||||||||||||||||||||||||||||| ||| |
|
|
| T |
17834711 |
aacaaagaaacaagagagtgtggaatgaggtaattgatgctccagtgtatgttgtcgagagagtaaaagttatgcttcatgattggcaagatgcacatag |
17834612 |
T |
|
| Q |
117 |
gatttgtaatacatcttgtgcacatccacgacaagaaggaaatgtgaaatggatcaa |
173 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| |
|
|
| T |
17834611 |
gatttgtaatacatcttgtgcacatccgcgacaagaaggaaatgtgaaattgatcaa |
17834555 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 17 - 215
Target Start/End: Original strand, 8783102 - 8783302
Alignment:
| Q |
17 |
aacaaagaaacaacagagtgtggaatgaggtaattgatgctccattttatattgttgagagagaaaaagttatgcttcatgattggcaagatgcacgtag |
116 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||| | ||||| |||| ||||||||||||| |||||||||||| |||||||||||| ||| |
|
|
| T |
8783102 |
aacaaagaaacaacagagtgtggaaagaggtaattgatgctcaagtttatgttgtggagagagaaaaagctatgcttcatgaatggcaagatgcatgtac |
8783201 |
T |
|
| Q |
117 |
gatttgtaat--acatcttgtgcacatccacgacaagaaggaaatgtgaaatggatcaaaccagctgaaggaagatttaagtgcaatattgttgcttctt |
214 |
Q |
| |
|
|||||||||| ||||||||| |||| | | ||||||||| |||||||||||||||||||| ||||| ||||||||||||||||||| || ||||| |
|
|
| T |
8783202 |
gatttgtaatacacatcttgtacacaattgcaagaagaaggaattgtgaaatggatcaaaccagttgaagagagatttaagtgcaatattgatgtttctt |
8783301 |
T |
|
| Q |
215 |
t |
215 |
Q |
| |
|
| |
|
|
| T |
8783302 |
t |
8783302 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 42 - 204
Target Start/End: Complemental strand, 16912763 - 16912601
Alignment:
| Q |
42 |
tgaggtaattgatgctccattttatattgttgagagagaaaaagttatgcttcatgattggcaagatgcacgtaggatttgtaatacatcttgtgcacat |
141 |
Q |
| |
|
||||||||||||||||| | ||||| || | ||||||| ||||| ||||||||||||||| ||| ||||| |||||||||||||||| | |||||||||| |
|
|
| T |
16912763 |
tgaggtaattgatgctcaagtttatgttatggagagagcaaaagctatgcttcatgattgacaaaatgcatgtaggatttgtaatacgttttgtgcacat |
16912664 |
T |
|
| Q |
142 |
ccacgacaagaaggaaatgtgaaatggatcaaaccagctgaaggaagatttaagtgcaatatt |
204 |
Q |
| |
|
|| | |||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||| |
|
|
| T |
16912663 |
ccgcaacaagaaggaaatgtgaaatggatcaaatcagcttaagaaagatttaagtgcaatatt |
16912601 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 68 - 239
Target Start/End: Complemental strand, 9605405 - 9605234
Alignment:
| Q |
68 |
ttgttgagagagaaaaagttatgcttcatgattggcaagatgcacgtaggatttgtaatacatcttgtgcacatccacgacaagaaggaaatgtgaaatg |
167 |
Q |
| |
|
|||||||||||| ||||| |||| |||||||||||||||||| |||||||||| |||||||||||||||||| || ||||||||| ||||||||||| |
|
|
| T |
9605405 |
ttgttgagagagcaaaagctatgattcatgattggcaagatgttcgtaggatttataatacatcttgtgcacaaccgggacaagaagaaaatgtgaaatt |
9605306 |
T |
|
| Q |
168 |
gatcaaaccagctgaaggaagatttaagtgcaatattgttgcttctttctcctagctttctaatagagtggg |
239 |
Q |
| |
|
|||||||||||||||| ||| ||||||||||||||||| || ||||||||| | |||| || ||||||||| |
|
|
| T |
9605305 |
gatcaaaccagctgaaagaatatttaagtgcaatattgatgactctttctcccaactttttattagagtggg |
9605234 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 55
Target Start/End: Original strand, 16912865 - 16912903
Alignment:
| Q |
17 |
aacaaagaaacaacagagtgtggaatgaggtaattgatg |
55 |
Q |
| |
|
|||||| |||||||| ||||||||||||||||||||||| |
|
|
| T |
16912865 |
aacaaataaacaacatagtgtggaatgaggtaattgatg |
16912903 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 167; Significance: 1e-89; HSPs: 5)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 17 - 239
Target Start/End: Original strand, 13596490 - 13596712
Alignment:
| Q |
17 |
aacaaagaaacaacagagtgtggaatgaggtaattgatgctccattttatattgttgagagagaaaaagttatgcttcatgattggcaagatgcacgtag |
116 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||| |||| |
|
|
| T |
13596490 |
aacaaagaaacaacagagtgtgggatgaggtaattgatgctccagtttatgttgttgagagagaaaatgttatgcttcatgattggcaagatgcatgtag |
13596589 |
T |
|
| Q |
117 |
gatttgtaatacatcttgtgcacatccacgacaagaaggaaatgtgaaatggatcaaaccagctgaaggaagatttaagtgcaatattgttgcttctttc |
216 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| | |||||||||||||||||||||||| |||||||||| |
|
|
| T |
13596590 |
gatttgtaatacatcttgtgcacagttgcgacaagaaggaaatgtgaaatggatcaagccagttaaaggaagatttaagtgcaatattgatgcttctttc |
13596689 |
T |
|
| Q |
217 |
tcctagctttctaatagagtggg |
239 |
Q |
| |
|
||| ||||||||||||||||||| |
|
|
| T |
13596690 |
tcccagctttctaatagagtggg |
13596712 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 17 - 237
Target Start/End: Original strand, 48859012 - 48859232
Alignment:
| Q |
17 |
aacaaagaaacaacagagtgtggaatgaggtaattgatgctccattttatattgttgagagagaaaaagttatgcttcatgattggcaagatgcacgtag |
116 |
Q |
| |
|
|||||||||| |||||| ||||||||||||||||||||||| | ||||| |||||||||||| |||| ||||||||||||||||||| |||||| |||| |
|
|
| T |
48859012 |
aacaaagaaaaaacagatcgtggaatgaggtaattgatgctcaagtttatgttgttgagagaggaaaaattatgcttcatgattggcatgatgcaagtag |
48859111 |
T |
|
| Q |
117 |
gatttgtaatacatcttgtgcacatccacgacaagaaggaaatgtgaaatggatcaaaccagctgaaggaagatttaagtgcaatattgttgcttctttc |
216 |
Q |
| |
|
|||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
48859112 |
gatttgtaatacatcttgtgcataaccacgacaagaaggaaatgtgaaatggatcaaaccaactgaaggaagatttaagtgcaatattgatgcttctttc |
48859211 |
T |
|
| Q |
217 |
tcctagctttctaatagagtg |
237 |
Q |
| |
|
||| | ||||||||||||||| |
|
|
| T |
48859212 |
tcccaactttctaatagagtg |
48859232 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 17 - 239
Target Start/End: Complemental strand, 23040605 - 23040383
Alignment:
| Q |
17 |
aacaaagaaacaacagagtgtggaatgaggtaattgatgctccattttatattgttgagagagaaaaagttatgcttcatgattggcaagatgcacgtag |
116 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||| ||| | | ||| || | ||||||| ||||||||| |||||||||||||||||||||||||| |
|
|
| T |
23040605 |
aacaaagaaacaacaaagtgtggaatgaggtaattgatactcaagtctatgttatggagagagcaaaagttatccttcatgattggcaagatgcacgtag |
23040506 |
T |
|
| Q |
117 |
gatttgtaatacatcttgtgcacatccacgacaagaaggaaatgtgaaatggatcaaaccagctgaaggaagatttaagtgcaatattgttgcttctttc |
216 |
Q |
| |
|
| || |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||| |||||||||||| |||||||||| |
|
|
| T |
23040505 |
gtttcgtaatacatcttgtgcacatccgcgacaagaaggaaatgtgaaatgaatcaaaccagctcaaggaagattttagtgcaatattgatgcttctttc |
23040406 |
T |
|
| Q |
217 |
tcctagctttctaatagagtggg |
239 |
Q |
| |
|
|| |||||||||||||||||||| |
|
|
| T |
23040405 |
tcatagctttctaatagagtggg |
23040383 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 17 - 239
Target Start/End: Original strand, 22910743 - 22910964
Alignment:
| Q |
17 |
aacaaagaaacaacagagtgtggaatgaggtaattgatgctccattttatattgttgagagagaaaaagttatgcttcatgattggcaagatgcacgtag |
116 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||| ||| | ||| | || ||||||| |||| |||||||||||||||||||||||||||||| |
|
|
| T |
22910743 |
aacaaagaaacaacaaagtgtggaatgaggtaattgatactcaagcctatgtagtggagagagcaaaaactatgcttcatgattggcaagatgcacgtag |
22910842 |
T |
|
| Q |
117 |
gatttgtaatacatcttgtgcacatccacgacaagaaggaaatgtgaaatggatcaaaccagctgaaggaagatttaagtgcaatattgttgcttctttc |
216 |
Q |
| |
|
| || ||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |
|
|
| T |
22910843 |
gtttcgtaatacttcttgtgcacatccg-gacaagaaggaaatgtgaaatggatcaaaccagctgaaggaagatttaagtgcaatattgatgcttcattc |
22910941 |
T |
|
| Q |
217 |
tcctagctttctaatagagtggg |
239 |
Q |
| |
|
|| | |||||||||| |||||| |
|
|
| T |
22910942 |
tcacaactttctaatatagtggg |
22910964 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 17 - 237
Target Start/End: Original strand, 26754453 - 26754673
Alignment:
| Q |
17 |
aacaaagaaacaacagagtgtggaatgaggtaattgatgctccattttatattgttgagagagaaaaagttatgcttcatgattggcaagatgcacgtag |
116 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||| || | ||||| |||| ||||||| |||||||| |||||||||||| |||||||||||||| |
|
|
| T |
26754453 |
aacaaagaaataacagagtgtggaatgaggtaattgatgatcaagtttatgttgtggagagagcaaaagttacgcttcatgattgacaagatgcacgtag |
26754552 |
T |
|
| Q |
117 |
gatttgtaatacatcttgtgcacatccacgacaagaaggaaatgtgaaatggatcaaaccagctgaaggaagatttaagtgcaatattgttgcttctttc |
216 |
Q |
| |
|
||||||||| || ||| ||||||| | ||||||||| |||| |||||||| ||||||||| ||||||||||||||||| |||||||| |||||||||| |
|
|
| T |
26754553 |
gatttgtaacacgtctcgtgcacaatcgcgacaagaaagaaacgtgaaatgaatcaaaccatgtgaaggaagatttaagtacaatattgatgcttctttc |
26754652 |
T |
|
| Q |
217 |
tcctagctttctaatagagtg |
237 |
Q |
| |
|
|| || |||| |||||||||| |
|
|
| T |
26754653 |
tcataactttataatagagtg |
26754673 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 161; Significance: 5e-86; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 17 - 237
Target Start/End: Complemental strand, 48026649 - 48026429
Alignment:
| Q |
17 |
aacaaagaaacaacagagtgtggaatgaggtaattgatgctccattttatattgttgagagagaaaaagttatgcttcatgattggcaagatgcacgtag |
116 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||| ||||| |||| ||||||| | |||||||| | |||||||| |||||||||||||| |
|
|
| T |
48026649 |
aacaaagaaacaacgaagtgtggaatgaggtaattgatgctccaatttatgttgtcgagagagcataagttatggtccatgattgacaagatgcacgtag |
48026550 |
T |
|
| Q |
117 |
gatttgtaatacatcttgtgcacatccacgacaagaaggaaatgtgaaatggatcaaaccagctgaaggaagatttaagtgcaatattgttgcttctttc |
216 |
Q |
| |
|
|||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
48026549 |
gatttgtaatacatcttgtggacatcggcgacaagaaggaaatgtgaaatggatcaaaccagctgaaggaagatttaagtgcaatattgatgcttctttc |
48026450 |
T |
|
| Q |
217 |
tcctagctttctaatagagtg |
237 |
Q |
| |
|
||| ||||||||||||||||| |
|
|
| T |
48026449 |
tcccagctttctaatagagtg |
48026429 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 22 - 182
Target Start/End: Original strand, 15609730 - 15609890
Alignment:
| Q |
22 |
agaaacaacagagtgtggaatgaggtaattgatgctccattttatattgttgagagagaaaaagttatgcttcatgattggcaagatgcacgtaggattt |
121 |
Q |
| |
|
|||||||||| |||||||||||||||| ||||||||| | ||||| |||| ||||||| |||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
15609730 |
agaaacaacaaagtgtggaatgaggtagttgatgctcaagtttatgttgtcgagagagtaaaagttatgcttcatgattggcaagatgcacgttggattt |
15609829 |
T |
|
| Q |
122 |
gtaatacatcttgtgcacatccacgacaagaaggaaatgtgaaatggatcaaaccagctga |
182 |
Q |
| |
|
|||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15609830 |
ttaatacatcttgtgcacaaccgcgacaagaaggaaatgtgaaatggatcaaaccagctga |
15609890 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 113; Significance: 2e-57; HSPs: 6)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 62 - 239
Target Start/End: Original strand, 44021812 - 44021985
Alignment:
| Q |
62 |
tttatattgttgagagagaaaaagttatgcttcatgattggcaagatgcacgtaggatttgtaatacatcttgtgcacatccacgacaagaaggaaatgt |
161 |
Q |
| |
|
|||||| ||| ||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| || | |||||||||||||| |
|
|
| T |
44021812 |
tttatagtgtcgagagagcaaaagttatgcttcacgatt----agatgcacgtaggatttgtaatacatcttgtgcacaaccgctgcaagaaggaaatgt |
44021907 |
T |
|
| Q |
162 |
gaaatggatcaaaccagctgaaggaagatttaagtgcaatattgttgcttctttctcctagctttctaatagagtggg |
239 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||||| |||||| |
|
|
| T |
44021908 |
gaaatggatcaaaccagctgaaggaagatttaagtgcaatattgatgcttctttcttccagctttctaataaagtggg |
44021985 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 17 - 239
Target Start/End: Original strand, 32922643 - 32922865
Alignment:
| Q |
17 |
aacaaagaaacaacagagtgtggaatgaggtaattgatgctccattttatattgttgagagagaaaaagttatgcttcatgattggcaagatgcacgtag |
116 |
Q |
| |
|
||||||||||||| ||||| || ||||||||| |||||||| | | ||| |||| ||||||| |||| |||| ||||||||||| |||||||| ||| |
|
|
| T |
32922643 |
aacaaagaaacaatagagtatgaaatgaggtagttgatgcttaagtatatgttgtggagagagtaaaatctatgtttcatgattggtaagatgcatgtaa |
32922742 |
T |
|
| Q |
117 |
gatttgtaatacatcttgtgcacatccacgacaagaaggaaatgtgaaatggatcaaaccagctgaaggaagatttaagtgcaatattgttgcttctttc |
216 |
Q |
| |
|
||||||||||||||| |||||||| || ||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||||||||| |||||||||| |
|
|
| T |
32922743 |
gatttgtaatacatcatgtgcacaaccgcgacaagtaggaaatgtgaaatggatcaaaccaactgaaggaatatttaagtgcaatattgatgcttctttc |
32922842 |
T |
|
| Q |
217 |
tcctagctttctaatagagtggg |
239 |
Q |
| |
|
||| | |||| ||||||| |||| |
|
|
| T |
32922843 |
tcccatctttataatagactggg |
32922865 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 17 - 205
Target Start/End: Original strand, 42131656 - 42131841
Alignment:
| Q |
17 |
aacaaagaaacaacagagtgtggaatgaggtaattgatgctccattttatattgttgagagagaaaaagttatgcttcatgattggcaagatgcacgtag |
116 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||| ||| ||||||| |||| ||||||| |||| |||||||||||||||||| ||||||||| |
|
|
| T |
42131656 |
aacaaagaaacaacaaagtgtggaatgaggtaattgatactcaattttatgttgtggagagagcaaaaactatgcttcatgattggca---tgcacgtag |
42131752 |
T |
|
| Q |
117 |
gatttgtaatacatcttgtgcacatccacgacaagaaggaaatgtgaaatggatcaaaccagctgaaggaagatttaagtgcaatattg |
205 |
Q |
| |
|
| |||| ||||||||||||||||| || |||||||||||||||||||||| ||||||||||||| || || |||||||||||||||||| |
|
|
| T |
42131753 |
gttttgcaatacatcttgtgcacaaccgcgacaagaaggaaatgtgaaatagatcaaaccagctaaaagaggatttaagtgcaatattg |
42131841 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 46 - 238
Target Start/End: Original strand, 43896034 - 43896225
Alignment:
| Q |
46 |
gtaattgatgctccattttatattgttgagagagaaaaagttatgcttcatgattggcaagatgcacgtaggatttgtaatacatcttgtgcacatccac |
145 |
Q |
| |
|
|||||||||||| | ||||| |||||||||| ||||| || ||||||||||| ||||||||| ||||||| |||||||||||| ||||| | || | |
|
|
| T |
43896034 |
gtaattgatgctaaagtttatgttgttgagagcacaaaagctacacttcatgattgacaagatgcatgtaggatatgtaatacatctcgtgcatagccgc |
43896133 |
T |
|
| Q |
146 |
gacaagaaggaaatgtgaaatggatcaaaccagctgaaggaagatttaagtgcaatattgttgcttctttctcctagctttctaatagagtgg |
238 |
Q |
| |
|
|||||||| ||||||| |||||||||||| ||||||| || |||||||||||| |||||| || || ||||||| ||||||||||||| |||| |
|
|
| T |
43896134 |
gacaagaaagaaatgttaaatggatcaaagcagctgaggggagatttaagtgctatattgatg-ttttttctcccagctttctaatagggtgg |
43896225 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 146 - 239
Target Start/End: Complemental strand, 30940023 - 30939930
Alignment:
| Q |
146 |
gacaagaaggaaatgtgaaatggatcaaaccagctgaaggaagatttaagtgcaatattgttgcttctttctcctagctttctaatagagtggg |
239 |
Q |
| |
|
|||| |||||||||||||||| || ||| |||||||| ||||||||||||||||||||| | ||||||||||| ||||||| |||| |||||| |
|
|
| T |
30940023 |
gacacgaaggaaatgtgaaataaattaaatcagctgaaagaagatttaagtgcaatattgatacttctttctcccagctttcaaataaagtggg |
30939930 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 111
Target Start/End: Complemental strand, 24428163 - 24428069
Alignment:
| Q |
17 |
aacaaagaaacaacagagtgtggaatgaggtaattgatgctccattttatattgttgagagagaaaaagttatgcttcatgattggcaagatgca |
111 |
Q |
| |
|
||||||||||||| | |||||||||||||||| |||||||| | ||||| |||| |||||| ||||| |||||||||||| | ||||||||| |
|
|
| T |
24428163 |
aacaaagaaacaataaagtgtggaatgaggtagttgatgctaaagtttatgttgtggagagaataaaagctatgcttcatgactaacaagatgca |
24428069 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0913 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0913
Description:
Target: scaffold0913; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 17 - 206
Target Start/End: Original strand, 3142 - 3330
Alignment:
| Q |
17 |
aacaaagaaacaacagagtgtggaatgaggtaattgatgctccattttatattgttgagagagaaaaagttatgcttcatgattggcaagatgcacgtag |
116 |
Q |
| |
|
||||||||||||||||||||||||| || ||||||||| || | ||||| || | |||||| ||||||||||||||||||||| ||| ||| |
|
|
| T |
3142 |
aacaaagaaacaacagagtgtggaa-gaagtaattgattgtcaagtttatgttttggagagatcaaaagttatgcttcatgattgacaaaccatttatag |
3240 |
T |
|
| Q |
117 |
gatttgtaatacatcttgtgcacatccacgacaagaaggaaatgtgaaatggatcaaaccagctgaaggaagatttaagtgcaatattgt |
206 |
Q |
| |
|
||||||||||||||||||| | || || ||||||||||||||||||||||||||||||||| || || ||||||||| |||||| ||||| |
|
|
| T |
3241 |
gatttgtaatacatcttgtacgcagccgcgacaagaaggaaatgtgaaatggatcaaaccaactaaacgaagatttatgtgcaagattgt |
3330 |
T |
|
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Target: scaffold0898 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0898
Description:
Target: scaffold0898; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 17 - 206
Target Start/End: Complemental strand, 2459 - 2271
Alignment:
| Q |
17 |
aacaaagaaacaacagagtgtggaatgaggtaattgatgctccattttatattgttgagagagaaaaagttatgcttcatgattggcaagatgcacgtag |
116 |
Q |
| |
|
||||||||||||||||||||||||| || ||||||||| || | ||||| || | |||||| ||||||||||||||||||||| ||| ||| |
|
|
| T |
2459 |
aacaaagaaacaacagagtgtggaa-gaagtaattgattgtcaagtttatgttttggagagatcaaaagttatgcttcatgattgacaaaccatttatag |
2361 |
T |
|
| Q |
117 |
gatttgtaatacatcttgtgcacatccacgacaagaaggaaatgtgaaatggatcaaaccagctgaaggaagatttaagtgcaatattgt |
206 |
Q |
| |
|
||||||||||||||||||| | || || ||||||||||||||||||||||||||||||||| || || ||||||||| |||||| ||||| |
|
|
| T |
2360 |
gatttgtaatacatcttgtacgcagccgcgacaagaaggaaatgtgaaatggatcaaaccaactaaacgaagatttatgtgcaagattgt |
2271 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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