View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5256_low_31 (Length: 230)

Name: NF5256_low_31
Description: NF5256
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5256_low_31
NF5256_low_31
[»] chr6 (29 HSPs)
chr6 (27-212)||(6751743-6751928)
chr6 (27-73)||(19369830-19369876)
chr6 (34-77)||(26402676-26402719)
chr6 (27-65)||(10031583-10031621)
chr6 (36-73)||(785455-785492)
chr6 (28-69)||(10157998-10158039)
chr6 (28-77)||(28715309-28715358)
chr6 (27-73)||(1334674-1334720)
chr6 (27-73)||(22745970-22746016)
chr6 (28-77)||(426510-426559)
chr6 (28-77)||(7377993-7378042)
chr6 (28-77)||(7977826-7977875)
chr6 (28-73)||(9024176-9024221)
chr6 (28-77)||(34595148-34595197)
chr6 (28-72)||(4859114-4859158)
chr6 (27-67)||(5579667-5579707)
chr6 (28-71)||(10335378-10335421)
chr6 (27-78)||(16516954-16517005)
chr6 (34-77)||(28152118-28152161)
chr6 (28-93)||(7265572-7265638)
chr6 (28-66)||(7942269-7942307)
chr6 (28-74)||(9629397-9629443)
chr6 (27-77)||(32225386-32225436)
chr6 (28-73)||(9617448-9617493)
chr6 (28-73)||(10770674-10770719)
chr6 (28-73)||(16766711-16766756)
chr6 (27-56)||(29959188-29959217)
chr6 (32-77)||(34057972-34058017)
chr6 (28-72)||(15489733-15489777)
[»] chr2 (31 HSPs)
chr2 (27-94)||(43585983-43586051)
chr2 (25-77)||(8300215-8300267)
chr2 (27-67)||(13501084-13501124)
chr2 (27-71)||(14450797-14450841)
chr2 (34-77)||(5040754-5040797)
chr2 (27-65)||(24067266-24067304)
chr2 (27-77)||(24067763-24067813)
chr2 (34-76)||(37558997-37559039)
chr2 (28-73)||(18570986-18571031)
chr2 (28-73)||(45000846-45000891)
chr2 (32-76)||(31026713-31026757)
chr2 (34-77)||(2438715-2438758)
chr2 (28-67)||(10535765-10535804)
chr2 (36-71)||(14373429-14373464)
chr2 (34-77)||(19536393-19536436)
chr2 (28-71)||(22131256-22131299)
chr2 (30-73)||(33884067-33884110)
chr2 (28-71)||(44605141-44605184)
chr2 (31-77)||(37211881-37211927)
chr2 (28-77)||(896225-896274)
chr2 (28-73)||(6180865-6180910)
chr2 (27-72)||(11223864-11223909)
chr2 (28-73)||(12668423-12668468)
chr2 (28-77)||(15972887-15972936)
chr2 (27-72)||(18512143-18512188)
chr2 (28-77)||(30404846-30404895)
chr2 (28-77)||(34006987-34007036)
chr2 (41-77)||(12224250-12224286)
chr2 (41-77)||(21624294-21624330)
chr2 (28-56)||(40681996-40682024)
chr2 (27-71)||(44984652-44984696)
[»] chr4 (34 HSPs)
chr4 (27-77)||(13307890-13307940)
chr4 (27-71)||(37496717-37496761)
chr4 (31-77)||(13117446-13117492)
chr4 (28-78)||(21945517-21945567)
chr4 (27-77)||(44362679-44362729)
chr4 (27-77)||(13484036-13484087)
chr4 (28-86)||(683066-683123)
chr4 (27-73)||(22799893-22799939)
chr4 (29-66)||(10164861-10164898)
chr4 (34-71)||(11797630-11797667)
chr4 (34-93)||(12797317-12797377)
chr4 (28-72)||(24613702-24613746)
chr4 (30-78)||(40224493-40224541)
chr4 (28-71)||(18513243-18513286)
chr4 (34-73)||(30298967-30299006)
chr4 (34-73)||(30327835-30327874)
chr4 (34-77)||(42640549-42640592)
chr4 (28-58)||(5654606-5654636)
chr4 (28-66)||(9988706-9988744)
chr4 (28-58)||(10546162-10546192)
chr4 (28-58)||(34589721-34589751)
chr4 (28-77)||(8423714-8423763)
chr4 (28-73)||(12895116-12895161)
chr4 (41-93)||(16073421-16073474)
chr4 (28-77)||(23292982-23293031)
chr4 (28-77)||(29205458-29205507)
chr4 (28-77)||(33950150-33950199)
chr4 (34-71)||(47492399-47492436)
chr4 (28-77)||(54580019-54580068)
chr4 (28-72)||(847965-848009)
chr4 (28-60)||(8457939-8457971)
chr4 (28-68)||(14465299-14465339)
chr4 (28-56)||(26276026-26276054)
chr4 (27-55)||(28663505-28663533)
[»] chr7 (31 HSPs)
chr7 (33-93)||(25956464-25956525)
chr7 (27-74)||(5937420-5937467)
chr7 (27-73)||(1885586-1885632)
chr7 (27-77)||(2144534-2144585)
chr7 (28-77)||(21880166-21880215)
chr7 (27-71)||(22801743-22801787)
chr7 (30-73)||(48964062-48964105)
chr7 (34-72)||(36013799-36013837)
chr7 (27-60)||(2143866-2143899)
chr7 (28-73)||(27945055-27945100)
chr7 (28-77)||(28155584-28155633)
chr7 (28-69)||(38134410-38134451)
chr7 (28-65)||(44172898-44172935)
chr7 (28-72)||(7438720-7438764)
chr7 (27-78)||(13094708-13094759)
chr7 (28-71)||(37775996-37776039)
chr7 (28-74)||(2525843-2525889)
chr7 (43-77)||(7197293-7197327)
chr7 (34-72)||(17257990-17258028)
chr7 (27-65)||(35238192-35238230)
chr7 (28-77)||(4909165-4909214)
chr7 (28-77)||(10893343-10893392)
chr7 (32-77)||(10893865-10893910)
chr7 (28-77)||(12843030-12843079)
chr7 (28-73)||(24339656-24339701)
chr7 (28-77)||(25481916-25481965)
chr7 (28-73)||(31808509-31808554)
chr7 (27-72)||(48438559-48438604)
chr7 (27-59)||(18678161-18678193)
chr7 (28-60)||(35917393-35917425)
chr7 (34-66)||(44317293-44317325)
[»] chr8 (33 HSPs)
chr8 (27-77)||(42874535-42874585)
chr8 (27-67)||(31119100-31119140)
chr8 (27-72)||(27733860-27733905)
chr8 (28-80)||(18170475-18170527)
chr8 (28-80)||(18634043-18634095)
chr8 (27-67)||(26915246-26915286)
chr8 (28-72)||(31548294-31548338)
chr8 (30-72)||(24295138-24295180)
chr8 (28-77)||(1433359-1433408)
chr8 (28-77)||(4948666-4948715)
chr8 (28-77)||(12985406-12985455)
chr8 (28-77)||(40332205-40332254)
chr8 (28-72)||(29447111-29447155)
chr8 (27-78)||(3954375-3954426)
chr8 (34-73)||(5307080-5307119)
chr8 (34-73)||(10002163-10002202)
chr8 (28-78)||(24669447-24669497)
chr8 (28-58)||(29198494-29198524)
chr8 (27-56)||(1639503-1639532)
chr8 (28-77)||(20873083-20873132)
chr8 (28-73)||(22651990-22652035)
chr8 (28-73)||(25566855-25566900)
chr8 (28-77)||(26434194-26434243)
chr8 (28-77)||(31236573-31236622)
chr8 (32-73)||(31681830-31681871)
chr8 (27-55)||(1591312-1591340)
chr8 (27-67)||(2652352-2652391)
chr8 (28-72)||(4298887-4298931)
chr8 (28-56)||(10441217-10441245)
chr8 (32-64)||(22600547-22600579)
chr8 (28-72)||(31586278-31586322)
chr8 (27-67)||(34073984-34074024)
chr8 (28-56)||(34201063-34201091)
[»] scaffold0314 (1 HSPs)
scaffold0314 (27-72)||(8961-9006)
[»] chr5 (26 HSPs)
chr5 (27-71)||(30080503-30080547)
chr5 (28-76)||(8420041-8420089)
chr5 (27-78)||(10010567-10010618)
chr5 (34-77)||(19167572-19167615)
chr5 (31-77)||(2548404-2548450)
chr5 (30-72)||(10009842-10009884)
chr5 (31-77)||(16207587-16207633)
chr5 (28-78)||(24906296-24906346)
chr5 (28-77)||(6247636-6247685)
chr5 (28-77)||(21191052-21191101)
chr5 (27-72)||(21319946-21319991)
chr5 (28-73)||(32444780-32444825)
chr5 (27-74)||(15294944-15294991)
chr5 (34-77)||(15884008-15884051)
chr5 (28-67)||(31264452-31264491)
chr5 (28-58)||(11596470-11596500)
chr5 (28-58)||(43208289-43208319)
chr5 (28-77)||(4445154-4445203)
chr5 (28-77)||(6326293-6326342)
chr5 (28-73)||(28296342-28296387)
chr5 (28-77)||(28588670-28588719)
chr5 (28-73)||(31084337-31084382)
chr5 (28-73)||(41558654-41558699)
chr5 (27-60)||(42192289-42192322)
chr5 (27-67)||(26205766-26205806)
chr5 (34-66)||(38784826-38784858)
[»] chr3 (27 HSPs)
chr3 (27-77)||(14338479-14338529)
chr3 (27-73)||(49179715-49179761)
chr3 (28-77)||(10954966-10955015)
chr3 (28-73)||(44427855-44427900)
chr3 (27-77)||(6984777-6984827)
chr3 (28-78)||(40150566-40150616)
chr3 (28-77)||(20503479-20503528)
chr3 (28-77)||(20691333-20691382)
chr3 (28-77)||(27858354-27858403)
chr3 (27-78)||(35222951-35223002)
chr3 (28-78)||(8587016-8587066)
chr3 (28-66)||(9210832-9210870)
chr3 (27-73)||(15864258-15864304)
chr3 (32-77)||(1502592-1502637)
chr3 (28-73)||(4990967-4991012)
chr3 (28-77)||(8383271-8383320)
chr3 (28-77)||(21149081-21149130)
chr3 (40-77)||(25775535-25775572)
chr3 (28-73)||(28918015-28918060)
chr3 (31-60)||(34409355-34409384)
chr3 (28-73)||(49651786-49651831)
chr3 (28-77)||(51206349-51206398)
chr3 (28-77)||(55401089-55401138)
chr3 (34-78)||(8593157-8593201)
chr3 (28-56)||(40017386-40017414)
chr3 (30-74)||(40697857-40697901)
chr3 (28-60)||(52558141-52558173)
[»] chr1 (34 HSPs)
chr1 (28-77)||(38078657-38078706)
chr1 (32-76)||(31667443-31667487)
chr1 (28-71)||(14332422-14332465)
chr1 (34-77)||(50195461-50195504)
chr1 (27-65)||(18946042-18946080)
chr1 (27-73)||(24462270-24462316)
chr1 (32-77)||(7988447-7988492)
chr1 (28-77)||(18337343-18337392)
chr1 (32-77)||(19637786-19637831)
chr1 (28-77)||(41877466-41877515)
chr1 (27-75)||(43966819-43966867)
chr1 (27-74)||(7888108-7888155)
chr1 (30-77)||(11412764-11412811)
chr1 (34-77)||(17007957-17008000)
chr1 (34-73)||(26390133-26390172)
chr1 (34-77)||(51410045-51410088)
chr1 (28-58)||(3921681-3921711)
chr1 (34-72)||(28170401-28170439)
chr1 (27-73)||(40176616-40176662)
chr1 (27-69)||(40686762-40686804)
chr1 (28-73)||(6612171-6612216)
chr1 (28-65)||(8203835-8203872)
chr1 (28-57)||(11571599-11571628)
chr1 (40-77)||(19058852-19058889)
chr1 (28-77)||(22515883-22515932)
chr1 (28-77)||(22881612-22881661)
chr1 (28-73)||(24577186-24577231)
chr1 (28-77)||(40258929-40258978)
chr1 (28-77)||(42359445-42359494)
chr1 (28-72)||(2445884-2445928)
chr1 (41-77)||(24334701-24334737)
chr1 (28-68)||(31015057-31015097)
chr1 (28-56)||(40747790-40747818)
chr1 (25-69)||(46914043-46914087)
[»] scaffold0024 (1 HSPs)
scaffold0024 (27-71)||(18110-18154)
[»] scaffold0504 (1 HSPs)
scaffold0504 (27-65)||(8705-8743)
[»] scaffold0652 (1 HSPs)
scaffold0652 (28-77)||(458-507)
[»] scaffold0083 (1 HSPs)
scaffold0083 (40-77)||(45526-45563)
[»] scaffold0050 (1 HSPs)
scaffold0050 (28-77)||(70292-70341)
[»] scaffold0049 (2 HSPs)
scaffold0049 (28-73)||(56936-56981)
scaffold0049 (28-77)||(63787-63836)
[»] scaffold0571 (1 HSPs)
scaffold0571 (28-60)||(7704-7736)
[»] scaffold0011 (1 HSPs)
scaffold0011 (28-72)||(240022-240066)


Alignment Details
Target: chr6 (Bit Score: 174; Significance: 9e-94; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 27 - 212
Target Start/End: Complemental strand, 6751928 - 6751743
Alignment:
Q  27 ttttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacatatacatgtcagacacacatgcatttttagaatcaatgtgagtttcacg 126  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6751928 ttttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacatatacatgtcagacacacatgcatttttagaatcaatgtgagtttcacg 6751829  T
Q  127 aaatcacggtggcaaattgtgttgaagtgccttaatttctagtttcaaatttgtgcttgattggtaattggtattgaggtggattt 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||||||||||||||    
T  6751828 aaatcacggtggcaaattgtgttgaagtgccttaatttctagtttcaaatttgagcttgtttggtatttggtattgaggtggattt 6751743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 27 - 73
Target Start/End: Original strand, 19369830 - 19369876
Alignment:
Q  27 ttttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcg 73  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  19369830 ttttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcg 19369876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 34 - 77
Target Start/End: Complemental strand, 26402719 - 26402676
Alignment:
Q  34 aaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 77  Q
    |||||||||||||||| |||||||||||||||||||||||||||    
T  26402719 aaaatgacataattcagtgtaatcacaagtgtcggtgtcggaca 26402676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 27 - 65
Target Start/End: Original strand, 10031583 - 10031621
Alignment:
Q  27 ttttgagaaaatgacataattcaatgtaatcacaagtgt 65  Q
    |||||||||||||||||||||||||||||||||||||||    
T  10031583 ttttgagaaaatgacataattcaatgtaatcacaagtgt 10031621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 36 - 73
Target Start/End: Complemental strand, 785492 - 785455
Alignment:
Q  36 aatgacataattcaatgtaatcacaagtgtcggtgtcg 73  Q
    ||||||||||||||||||||||||||||||||||||||    
T  785492 aatgacataattcaatgtaatcacaagtgtcggtgtcg 785455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 10157998 - 10158039
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggt 69  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  10157998 tttgagaaaatgacataattcaatgtaatcacatgtgtcggt 10158039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 28715309 - 28715358
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 77  Q
    ||||| |||||||||||||||| |||||| ||||||||||||||||||||    
T  28715309 tttgaaaaaatgacataattcagtgtaattacaagtgtcggtgtcggaca 28715358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 27 - 73
Target Start/End: Original strand, 1334674 - 1334720
Alignment:
Q  27 ttttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcg 73  Q
    |||||| |||| ||||||||||||||||||||||| |||||||||||    
T  1334674 ttttgaaaaaaggacataattcaatgtaatcacaaatgtcggtgtcg 1334720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 27 - 73
Target Start/End: Original strand, 22745970 - 22746016
Alignment:
Q  27 ttttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcg 73  Q
    |||||||||||||  ||| ||||||||||||||||||||||||||||    
T  22745970 ttttgagaaaatgttatatttcaatgtaatcacaagtgtcggtgtcg 22746016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 426559 - 426510
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 77  Q
    ||||| ||||| |||||||| |||||||| ||||||||||||||||||||    
T  426559 tttgaaaaaatcacataattaaatgtaattacaagtgtcggtgtcggaca 426510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 7377993 - 7378042
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 77  Q
    ||||||||||| ||||||||||||||||| | | ||||||||||||||||    
T  7377993 tttgagaaaatcacataattcaatgtaattatatgtgtcggtgtcggaca 7378042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 7977875 - 7977826
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 77  Q
    ||||| ||||| |||||||||| |||||| ||||||||||||||||||||    
T  7977875 tttgaaaaaattacataattcagtgtaattacaagtgtcggtgtcggaca 7977826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 9024221 - 9024176
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcg 73  Q
    ||||||||||||||||||||||||||||||| | ||||| ||||||    
T  9024221 tttgagaaaatgacataattcaatgtaatcatatgtgtcagtgtcg 9024176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 34595148 - 34595197
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 77  Q
    ||||| ||||| |||||||||| |||||| ||||||||||||||||||||    
T  34595148 tttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggaca 34595197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 4859158 - 4859114
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtc 72  Q
    ||||||||||||||||||| ||||||||||||| ||||| |||||    
T  4859158 tttgagaaaatgacataatccaatgtaatcacacgtgtcagtgtc 4859114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 67
Target Start/End: Original strand, 5579667 - 5579707
Alignment:
Q  27 ttttgagaaaatgacataattcaatgtaatcacaagtgtcg 67  Q
    |||||||||||||||||| ||||||||| ||||||||||||    
T  5579667 ttttgagaaaatgacatagttcaatgtagtcacaagtgtcg 5579707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 71
Target Start/End: Complemental strand, 10335421 - 10335378
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgt 71  Q
    |||||||||||||||||||| |||||||||| | ||||||||||    
T  10335421 tttgagaaaatgacataattgaatgtaatcagatgtgtcggtgt 10335378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 78
Target Start/End: Original strand, 16516954 - 16517005
Alignment:
Q  27 ttttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacat 78  Q
    |||||||||||  | |||||||||||||||||| |||||||||||| |||||    
T  16516954 ttttgagaaaactatataattcaatgtaatcactagtgtcggtgtccgacat 16517005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 77
Target Start/End: Original strand, 28152118 - 28152161
Alignment:
Q  34 aaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 77  Q
    ||||| |||||||||| |||||| ||||||||||||||||||||    
T  28152118 aaaatcacataattcagtgtaattacaagtgtcggtgtcggaca 28152161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 93
Target Start/End: Complemental strand, 7265638 - 7265572
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca-tatacatgtcagacac 93  Q
    ||||||||||| |||||||||| |||||| | | ||||||||||||||||  ||||||||| |||||    
T  7265638 tttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcggacacaatacatgtccgacac 7265572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 66
Target Start/End: Original strand, 7942269 - 7942307
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtc 66  Q
    ||||||| ||||||||||||||||||||||||| |||||    
T  7942269 tttgagacaatgacataattcaatgtaatcacatgtgtc 7942307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 9629397 - 9629443
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcgg 74  Q
    ||||||||||| ||||||||||||||||| | | |||||||||||||    
T  9629397 tttgagaaaatcacataattcaatgtaattatatgtgtcggtgtcgg 9629443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 77
Target Start/End: Complemental strand, 32225436 - 32225386
Alignment:
Q  27 ttttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 77  Q
    |||||||||||| || | | |||||||||||||| ||||||||||||||||    
T  32225436 ttttgagaaaataacgtgagtcaatgtaatcacaggtgtcggtgtcggaca 32225386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 73
Target Start/End: Original strand, 9617448 - 9617493
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcg 73  Q
    ||||||||||| ||||||||||||||||| | | ||||||||||||    
T  9617448 tttgagaaaatcacataattcaatgtaattatatgtgtcggtgtcg 9617493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 10770719 - 10770674
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcg 73  Q
    ||||| ||||| |||||||||| |||||| ||||||||||||||||    
T  10770719 tttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 10770674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 73
Target Start/End: Original strand, 16766711 - 16766756
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcg 73  Q
    ||||| ||||| |||||||||| |||||| ||||||||||||||||    
T  16766711 tttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 16766756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 56
Target Start/End: Original strand, 29959188 - 29959217
Alignment:
Q  27 ttttgagaaaatgacataattcaatgtaat 56  Q
    ||||||||||||||||||||||||||||||    
T  29959188 ttttgagaaaatgacataattcaatgtaat 29959217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 77
Target Start/End: Original strand, 34057972 - 34058017
Alignment:
Q  32 agaaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 77  Q
    |||||||||||||||| | |||||||||| ||||||||||| ||||    
T  34057972 agaaaatgacataattgactgtaatcacatgtgtcggtgtcagaca 34058017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 15489777 - 15489733
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtc 72  Q
    ||||| ||||| ||| ||||||||||||| |||||||||||||||    
T  15489777 tttgaaaaaattacacaattcaatgtaattacaagtgtcggtgtc 15489733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 53; Significance: 1e-21; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 27 - 94
Target Start/End: Complemental strand, 43586051 - 43585983
Alignment:
Q  27 ttttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca-tatacatgtcagacaca 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  |||| |||||||||||    
T  43586051 ttttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgtcagacaca 43585983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 8300267 - 8300215
Alignment:
Q  25 acttttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 77  Q
    ||||||||||||||||||||||| | |||||||| |||||||||||| |||||    
T  8300267 acttttgagaaaatgacataatttagtgtaatcataagtgtcggtgttggaca 8300215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 13501124 - 13501084
Alignment:
Q  27 ttttgagaaaatgacataattcaatgtaatcacaagtgtcg 67  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  13501124 ttttaagaaaatgacataattcaatgtaatcacaagtgtcg 13501084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 14450841 - 14450797
Alignment:
Q  27 ttttgagaaaatgacataattcaatgtaatcacaagtgtcggtgt 71  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||    
T  14450841 ttttgagaaaatcacataattcaatgtaatcacaagtgtcagtgt 14450797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 77
Target Start/End: Original strand, 5040754 - 5040797
Alignment:
Q  34 aaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 77  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||    
T  5040754 aaaatcacataattcaatgtaattacaagtgtcggtgtcggaca 5040797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 27 - 65
Target Start/End: Original strand, 24067266 - 24067304
Alignment:
Q  27 ttttgagaaaatgacataattcaatgtaatcacaagtgt 65  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  24067266 ttttgtgaaaatgacataattcaatgtaatcacaagtgt 24067304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 27 - 77
Target Start/End: Original strand, 24067763 - 24067813
Alignment:
Q  27 ttttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 77  Q
    ||||||||||||| ||||||| |||| ||||||||||||||||||| ||||    
T  24067763 ttttgagaaaatgtcataattaaatgaaatcacaagtgtcggtgtcagaca 24067813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 34 - 76
Target Start/End: Original strand, 37558997 - 37559039
Alignment:
Q  34 aaaatgacataattcaatgtaatcacaagtgtcggtgtcggac 76  Q
    ||||| ||||||||||||||||| |||||||||||||||||||    
T  37558997 aaaatcacataattcaatgtaattacaagtgtcggtgtcggac 37559039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 73
Target Start/End: Original strand, 18570986 - 18571031
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcg 73  Q
    ||||||||||||||||||||||||||||||| | ||||| ||||||    
T  18570986 tttgagaaaatgacataattcaatgtaatcatatgtgtcagtgtcg 18571031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 45000891 - 45000846
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcg 73  Q
    ||||||||||||||| ||||||||||||||| | ||||||||||||    
T  45000891 tttgagaaaatgacacaattcaatgtaatcatatgtgtcggtgtcg 45000846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 31026713 - 31026757
Alignment:
Q  32 agaaaatgacataattcaatgtaatcacaagtgtcggtgtcggac 76  Q
    ||||||||||||||||||||||||||| |  ||||||||||||||    
T  31026713 agaaaatgacataattcaatgtaatcatatatgtcggtgtcggac 31026757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 77
Target Start/End: Complemental strand, 2438758 - 2438715
Alignment:
Q  34 aaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 77  Q
    ||||| |||||||||| |||||| ||||||||||||||||||||    
T  2438758 aaaatcacataattcagtgtaattacaagtgtcggtgtcggaca 2438715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 67
Target Start/End: Complemental strand, 10535804 - 10535765
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcg 67  Q
    |||||||||||||||||||||| |||||||| ||||||||    
T  10535804 tttgagaaaatgacataattcagtgtaatcataagtgtcg 10535765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 71
Target Start/End: Complemental strand, 14373464 - 14373429
Alignment:
Q  36 aatgacataattcaatgtaatcacaagtgtcggtgt 71  Q
    ||||||||||||||||||||||||| ||||||||||    
T  14373464 aatgacataattcaatgtaatcacatgtgtcggtgt 14373429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 77
Target Start/End: Complemental strand, 19536436 - 19536393
Alignment:
Q  34 aaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 77  Q
    ||||| |||||||||| |||||| ||||||||||||||||||||    
T  19536436 aaaatcacataattcagtgtaattacaagtgtcggtgtcggaca 19536393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 71
Target Start/End: Complemental strand, 22131299 - 22131256
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgt 71  Q
    ||||||||||||||||  ||||||||||||||| ||||||||||    
T  22131299 tttgagaaaatgacattgttcaatgtaatcacatgtgtcggtgt 22131256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 73
Target Start/End: Original strand, 33884067 - 33884110
Alignment:
Q  30 tgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcg 73  Q
    |||||||||||||| ||||| |||||| ||||||||||||||||    
T  33884067 tgagaaaatgacatgattcagtgtaattacaagtgtcggtgtcg 33884110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 71
Target Start/End: Complemental strand, 44605184 - 44605141
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgt 71  Q
    ||||||||||| ||||||||||||||||| ||| ||||||||||    
T  44605184 tttgagaaaataacataattcaatgtaattacatgtgtcggtgt 44605141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 77
Target Start/End: Complemental strand, 37211927 - 37211881
Alignment:
Q  31 gagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 77  Q
    |||||||||||| ||||||||||||| |||||||||  |||||||||    
T  37211927 gagaaaatgacacaattcaatgtaattacaagtgtctatgtcggaca 37211881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 896225 - 896274
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 77  Q
    ||||||||||| ||||| ||||||||||||| | ||||||| ||||||||    
T  896225 tttgagaaaatcacatatttcaatgtaatcatatgtgtcggcgtcggaca 896274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 6180910 - 6180865
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcg 73  Q
    |||||||||||||||| |||||||||||||| ||||| ||| ||||    
T  6180910 tttgagaaaatgacatgattcaatgtaatcataagtgccggagtcg 6180865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 11223909 - 11223864
Alignment:
Q  27 ttttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtc 72  Q
    |||||| ||||| |||||||||| |||||| |||||||||||||||    
T  11223909 ttttgaaaaaataacataattcagtgtaattacaagtgtcggtgtc 11223864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 12668468 - 12668423
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcg 73  Q
    ||||| |||||||||||||||| |||||| | ||||||||||||||    
T  12668468 tttgaaaaaatgacataattcagtgtaattataagtgtcggtgtcg 12668423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 15972887 - 15972936
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 77  Q
    ||||| ||||| ||| |||||| |||||| ||||||||||||||||||||    
T  15972887 tttgaaaaaattacacaattcagtgtaattacaagtgtcggtgtcggaca 15972936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 18512188 - 18512143
Alignment:
Q  27 ttttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtc 72  Q
    |||||||||||| | ||||||||||||||||||| ||||| |||||    
T  18512188 ttttgagaaaataatataattcaatgtaatcacatgtgtcagtgtc 18512143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 30404895 - 30404846
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 77  Q
    ||||| ||||| |||||||||| |||||| ||||||||||| ||||||||    
T  30404895 tttgaaaaaatcacataattcagtgtaattacaagtgtcggcgtcggaca 30404846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 34007036 - 34006987
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 77  Q
    ||||||||| |||||||||||| |||||||| | |||||||||| |||||    
T  34007036 tttgagaaattgacataattcagtgtaatcataggtgtcggtgtgggaca 34006987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 77
Target Start/End: Original strand, 12224250 - 12224286
Alignment:
Q  41 cataattcaatgtaatcacaagtgtcggtgtcggaca 77  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  12224250 cataatccaatgtaattacaagtgtcggtgtcggaca 12224286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 77
Target Start/End: Original strand, 21624294 - 21624330
Alignment:
Q  41 cataattcaatgtaatcacaagtgtcggtgtcggaca 77  Q
    ||||||||| |||||| ||||||||||||||||||||    
T  21624294 cataattcagtgtaattacaagtgtcggtgtcggaca 21624330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 56
Target Start/End: Original strand, 40681996 - 40682024
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaat 56  Q
    |||||||||||||||||||||||||||||    
T  40681996 tttgagaaaatgacataattcaatgtaat 40682024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 44984696 - 44984652
Alignment:
Q  27 ttttgagaaaatgacataattcaatgtaatcacaagtgtcggtgt 71  Q
    |||||| ||||||| |||||||||||| |||||||||||| ||||    
T  44984696 ttttgaaaaaatgatataattcaatgtgatcacaagtgtccgtgt 44984652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 6e-18; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 27 - 77
Target Start/End: Original strand, 13307890 - 13307940
Alignment:
Q  27 ttttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 77  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  13307890 ttttgagaaaatgacataattcaatgtaatcacaagtgttggtgtcggaca 13307940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 37496717 - 37496761
Alignment:
Q  27 ttttgagaaaatgacataattcaatgtaatcacaagtgtcggtgt 71  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  37496717 ttttgagaaaatgacataattcaatgtaatcacaagtgtcggtgt 37496761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 77
Target Start/End: Original strand, 13117446 - 13117492
Alignment:
Q  31 gagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 77  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||    
T  13117446 gagaaaatgacaaaattcaatgtaatcacaagtgtcggtgtcggaca 13117492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 78
Target Start/End: Original strand, 21945517 - 21945567
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacat 78  Q
    ||||| |||||||||||||||| |||||| |||||||||||||||||||||    
T  21945517 tttgaaaaaatgacataattcagtgtaattacaagtgtcggtgtcggacat 21945567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 27 - 77
Target Start/End: Original strand, 44362679 - 44362729
Alignment:
Q  27 ttttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 77  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||| ||||    
T  44362679 ttttgagaaaatgacataatttaatgtaatcacaagtgttggtgtcagaca 44362729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 77
Target Start/End: Original strand, 13484036 - 13484087
Alignment:
Q  27 ttttgagaaaatgacataattcaa-tgtaatcacaagtgtcggtgtcggaca 77  Q
    |||||||||||| ||||||||||| |||||||||||||||| ||||||||||    
T  13484036 ttttgagaaaataacataattcaaatgtaatcacaagtgtcagtgtcggaca 13484087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 28 - 86
Target Start/End: Original strand, 683066 - 683123
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacatatacatgt 86  Q
    |||||||||||||||||||| |||||||||||| ||||| |||||||||| | ||||||    
T  683066 tttgagaaaatgacataattgaatgtaatcacatgtgtc-gtgtcggacacaaacatgt 683123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 27 - 73
Target Start/End: Complemental strand, 22799939 - 22799893
Alignment:
Q  27 ttttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcg 73  Q
    |||| ||||||||||||||||||||||||||||| ||||| ||||||    
T  22799939 tttttagaaaatgacataattcaatgtaatcacacgtgtcagtgtcg 22799893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 66
Target Start/End: Complemental strand, 10164898 - 10164861
Alignment:
Q  29 ttgagaaaatgacataattcaatgtaatcacaagtgtc 66  Q
    |||| |||||||||||||||||||||||||||||||||    
T  10164898 ttgaaaaaatgacataattcaatgtaatcacaagtgtc 10164861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 34 - 71
Target Start/End: Complemental strand, 11797667 - 11797630
Alignment:
Q  34 aaaatgacataattcaatgtaatcacaagtgtcggtgt 71  Q
    |||||||||||||| |||||||||||||||||||||||    
T  11797667 aaaatgacataatttaatgtaatcacaagtgtcggtgt 11797630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 12797377 - 12797317
Alignment:
Q  34 aaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca-tatacatgtcagacac 93  Q
    ||||| |||||||||| |||||| ||||||||||||||||||||  ||||||||| |||||    
T  12797377 aaaatcacataattcagtgtaattacaagtgtcggtgtcggacacgatacatgtctgacac 12797317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 24613746 - 24613702
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtc 72  Q
    ||||||||||| ||||||||||||||||  |||||||||||||||    
T  24613746 tttgagaaaatcacataattcaatgtaagtacaagtgtcggtgtc 24613702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 78
Target Start/End: Complemental strand, 40224541 - 40224493
Alignment:
Q  30 tgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacat 78  Q
    |||||||||||||||||| |||||||||| | |||||||||| ||||||    
T  40224541 tgagaaaatgacataatttaatgtaatcatatgtgtcggtgttggacat 40224493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 71
Target Start/End: Complemental strand, 18513286 - 18513243
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgt 71  Q
    ||||||||||||||||||||||||||||||| | ||||| ||||    
T  18513286 tttgagaaaatgacataattcaatgtaatcatatgtgtcagtgt 18513243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 73
Target Start/End: Original strand, 30298967 - 30299006
Alignment:
Q  34 aaaatgacataattcaatgtaatcacaagtgtcggtgtcg 73  Q
    |||||||||||||||| |||||| ||||||||||||||||    
T  30298967 aaaatgacataattcagtgtaattacaagtgtcggtgtcg 30299006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 73
Target Start/End: Original strand, 30327835 - 30327874
Alignment:
Q  34 aaaatgacataattcaatgtaatcacaagtgtcggtgtcg 73  Q
    |||||||||||||||| |||||| ||||||||||||||||    
T  30327835 aaaatgacataattcagtgtaattacaagtgtcggtgtcg 30327874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 77
Target Start/End: Original strand, 42640549 - 42640592
Alignment:
Q  34 aaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 77  Q
    ||||| |||||||||| |||||| ||||||||||||||||||||    
T  42640549 aaaatcacataattcagtgtaattacaagtgtcggtgtcggaca 42640592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 58
Target Start/End: Complemental strand, 5654636 - 5654606
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatca 58  Q
    |||||||||||||||||||||||||||||||    
T  5654636 tttgagaaaatgacataattcaatgtaatca 5654606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 66
Target Start/End: Complemental strand, 9988744 - 9988706
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtc 66  Q
    |||||||||||||||||||| |||||||||||| |||||    
T  9988744 tttgagaaaatgacataattgaatgtaatcacatgtgtc 9988706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 58
Target Start/End: Original strand, 10546162 - 10546192
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatca 58  Q
    |||||||||||||||||||||||||||||||    
T  10546162 tttgagaaaatgacataattcaatgtaatca 10546192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 58
Target Start/End: Complemental strand, 34589751 - 34589721
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatca 58  Q
    |||||||||||||||||||||||||||||||    
T  34589751 tttgagaaaatgacataattcaatgtaatca 34589721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 8423763 - 8423714
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 77  Q
    ||||||||||| |||||||||| |||||| | || |||||||||||||||    
T  8423763 tttgagaaaatcacataattcagtgtaattataaatgtcggtgtcggaca 8423714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 12895161 - 12895116
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcg 73  Q
    ||||| ||||| ||||||||||| ||||| ||||||||||||||||    
T  12895161 tttgaaaaaatcacataattcaaagtaattacaagtgtcggtgtcg 12895116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 93
Target Start/End: Original strand, 16073421 - 16073474
Alignment:
Q  41 cataattcaatgtaatcacaagtgtcggtgtcggaca-tatacatgtcagacac 93  Q
    ||||||||| |||||| ||||||||||||||||||||  ||||||||| |||||    
T  16073421 cataattcagtgtaattacaagtgtcggtgtcggacacgatacatgtccgacac 16073474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 23293031 - 23292982
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 77  Q
    ||||| ||||| |||||||||| | |||| ||||||||||||||||||||    
T  23293031 tttgaaaaaatcacataattcagtataattacaagtgtcggtgtcggaca 23292982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 29205458 - 29205507
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 77  Q
    ||||| ||||| |||||||||| |||||| |||||||||||||| |||||    
T  29205458 tttgaaaaaatcacataattcagtgtaattacaagtgtcggtgttggaca 29205507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 33950150 - 33950199
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 77  Q
    ||||||||||| |||||||| |||||||||| | ||||||||||| ||||    
T  33950150 tttgagaaaatcacataatttaatgtaatcatatgtgtcggtgtcagaca 33950199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 34 - 71
Target Start/End: Original strand, 47492399 - 47492436
Alignment:
Q  34 aaaatgacataattcaatgtaatcacaagtgtcggtgt 71  Q
    |||||||||||||| |||||||||||||||||| ||||    
T  47492399 aaaatgacataatttaatgtaatcacaagtgtcagtgt 47492436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 54580068 - 54580019
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 77  Q
    ||||| ||||| |||||||||| |||||| | ||||||||||||||||||    
T  54580068 tttgaaaaaatcacataattcagtgtaattataagtgtcggtgtcggaca 54580019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 847965 - 848009
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtc 72  Q
    ||||||||||| |||||||||| | |||| |||||||||||||||    
T  847965 tttgagaaaattacataattcactataattacaagtgtcggtgtc 848009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 8457939 - 8457971
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcaca 60  Q
    |||||||||||||||||||| ||||||||||||    
T  8457939 tttgagaaaatgacataattgaatgtaatcaca 8457971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 68
Target Start/End: Complemental strand, 14465339 - 14465299
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcgg 68  Q
    |||||||||||||||||||||||| |||||| | |||||||    
T  14465339 tttgagaaaatgacataattcaatttaatcatatgtgtcgg 14465299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 56
Target Start/End: Complemental strand, 26276054 - 26276026
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaat 56  Q
    |||||||||||||||||||||||||||||    
T  26276054 tttgagaaaatgacataattcaatgtaat 26276026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 55
Target Start/End: Original strand, 28663505 - 28663533
Alignment:
Q  27 ttttgagaaaatgacataattcaatgtaa 55  Q
    |||||||||||||||||||||||||||||    
T  28663505 ttttgagaaaatgacataattcaatgtaa 28663533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 2e-17; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 33 - 93
Target Start/End: Original strand, 25956464 - 25956525
Alignment:
Q  33 gaaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca-tatacatgtcagacac 93  Q
    |||||||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||    
T  25956464 gaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacatgtcggacac 25956525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 27 - 74
Target Start/End: Complemental strand, 5937467 - 5937420
Alignment:
Q  27 ttttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcgg 74  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||    
T  5937467 ttttgagaaaatgacataattcaatgtaatcacaagtgtctgtgtcgg 5937420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 27 - 73
Target Start/End: Original strand, 1885586 - 1885632
Alignment:
Q  27 ttttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcg 73  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||    
T  1885586 ttttgaaaaaatgacataattcaatgtaatcacaagtgtcggtgtcg 1885632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 27 - 77
Target Start/End: Complemental strand, 2144585 - 2144534
Alignment:
Q  27 ttttgagaaaatgacataattcaatgtaatcacaagtgtc-ggtgtcggaca 77  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  2144585 ttttgagaaaatgacataattcaatgtaatcacacgtgtcaggtgtcggaca 2144534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 21880166 - 21880215
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 77  Q
    ||||||||||| |||||||||| |||||| ||||||||||||||||||||    
T  21880166 tttgagaaaattacataattcagtgtaattacaagtgtcggtgtcggaca 21880215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 22801787 - 22801743
Alignment:
Q  27 ttttgagaaaatgacataattcaatgtaatcacaagtgtcggtgt 71  Q
    |||||||| |||||||||||||| |||||||||||||||||||||    
T  22801787 ttttgagataatgacataattcactgtaatcacaagtgtcggtgt 22801743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 73
Target Start/End: Complemental strand, 48964105 - 48964062
Alignment:
Q  30 tgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcg 73  Q
    |||||||||||||||||||||| ||||||||||||| |||||||    
T  48964105 tgagaaaatgacataattcaatttaatcacaagtgttggtgtcg 48964062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 34 - 72
Target Start/End: Complemental strand, 36013837 - 36013799
Alignment:
Q  34 aaaatgacataattcaatgtaatcacaagtgtcggtgtc 72  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  36013837 aaaatgacataattcaatgtaatcacacgtgtcggtgtc 36013799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 60
Target Start/End: Complemental strand, 2143899 - 2143866
Alignment:
Q  27 ttttgagaaaatgacataattcaatgtaatcaca 60  Q
    ||||||||||||||||||||||||||||||||||    
T  2143899 ttttgagaaaatgacataattcaatgtaatcaca 2143866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 73
Target Start/End: Original strand, 27945055 - 27945100
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcg 73  Q
    ||||||||||| |||||||||| |||||| ||||||||||||||||    
T  27945055 tttgagaaaattacataattcagtgtaattacaagtgtcggtgtcg 27945100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 28155584 - 28155633
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 77  Q
    ||||||||||| |||||||||  |||||| ||||||||||||||||||||    
T  28155584 tttgagaaaattacataattcggtgtaattacaagtgtcggtgtcggaca 28155633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 69
Target Start/End: Complemental strand, 38134451 - 38134410
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggt 69  Q
    ||||||||||||||||||||||||||||||| | ||||||||    
T  38134451 tttgagaaaatgacataattcaatgtaatcatatgtgtcggt 38134410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 65
Target Start/End: Complemental strand, 44172935 - 44172898
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgt 65  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  44172935 tttgagaaaatgacataattcaatgtaatcacatgtgt 44172898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 7438720 - 7438764
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtc 72  Q
    ||||| ||||| ||||||||||||||||| |||||||||||||||    
T  7438720 tttgaaaaaatcacataattcaatgtaattacaagtgtcggtgtc 7438764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 78
Target Start/End: Complemental strand, 13094759 - 13094708
Alignment:
Q  27 ttttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacat 78  Q
    |||||||||||  | |||||||||||||||||| |||||||||||| |||||    
T  13094759 ttttgagaaaactatataattcaatgtaatcactagtgtcggtgtccgacat 13094708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 71
Target Start/End: Original strand, 37775996 - 37776039
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgt 71  Q
    |||||||||||||||||||| |||||||||||| ||||| ||||    
T  37775996 tttgagaaaatgacataattaaatgtaatcacatgtgtcagtgt 37776039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Complemental strand, 2525889 - 2525843
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcgg 74  Q
    |||||| ||||||||||||||||| |||||| | |||||||||||||    
T  2525889 tttgagcaaatgacataattcaatataatcatatgtgtcggtgtcgg 2525843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 77
Target Start/End: Complemental strand, 7197327 - 7197293
Alignment:
Q  43 taattcaatgtaatcacaagtgtcggtgtcggaca 77  Q
    |||||||||||||| ||||||||||||||||||||    
T  7197327 taattcaatgtaattacaagtgtcggtgtcggaca 7197293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 72
Target Start/End: Complemental strand, 17258028 - 17257990
Alignment:
Q  34 aaaatgacataattcaatgtaatcacaagtgtcggtgtc 72  Q
    ||||| ||||||||||||||||||| |||||||||||||    
T  17258028 aaaataacataattcaatgtaatcataagtgtcggtgtc 17257990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 65
Target Start/End: Complemental strand, 35238230 - 35238192
Alignment:
Q  27 ttttgagaaaatgacataattcaatgtaatcacaagtgt 65  Q
    ||||||||||||||||||||||||| |||||||| ||||    
T  35238230 ttttgagaaaatgacataattcaatataatcacacgtgt 35238192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 4909165 - 4909214
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 77  Q
    ||||||||||| |||||||||| |||||||| | ||||| ||||||||||    
T  4909165 tttgagaaaattacataattcattgtaatcatatgtgtcagtgtcggaca 4909214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 10893392 - 10893343
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 77  Q
    |||||||||||||||||||| ||||||||| || |||| ||| |||||||    
T  10893392 tttgagaaaatgacataattgaatgtaatcgcatgtgttggtatcggaca 10893343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 77
Target Start/End: Complemental strand, 10893910 - 10893865
Alignment:
Q  32 agaaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 77  Q
    |||||||||||||||| |||||||||||| |||| |||||| ||||    
T  10893910 agaaaatgacataattgaatgtaatcacatgtgttggtgtctgaca 10893865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 12843079 - 12843030
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 77  Q
    |||||||||||||||||||| ||| |||||||| ||||| | ||||||||    
T  12843079 tttgagaaaatgacataattgaatataatcacacgtgtctgggtcggaca 12843030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 73
Target Start/End: Original strand, 24339656 - 24339701
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcg 73  Q
    ||||| ||||| |||||||||| |||||| ||||||||||||||||    
T  24339656 tttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 24339701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 25481916 - 25481965
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 77  Q
    ||||| ||||| |||||||||| |||||| |||||||| |||||||||||    
T  25481916 tttgaaaaaatcacataattcagtgtaattacaagtgttggtgtcggaca 25481965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 31808554 - 31808509
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcg 73  Q
    ||||||||||||||| || |||||||||||||| |||| |||||||    
T  31808554 tttgagaaaatgacacaagtcaatgtaatcacatgtgttggtgtcg 31808509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 48438559 - 48438604
Alignment:
Q  27 ttttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtc 72  Q
    |||||| ||||| ||||||||||||||||| ||| |||||||||||    
T  48438559 ttttgaaaaaatcacataattcaatgtaattacacgtgtcggtgtc 48438604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 59
Target Start/End: Original strand, 18678161 - 18678193
Alignment:
Q  27 ttttgagaaaatgacataattcaatgtaatcac 59  Q
    ||||||||||||||||||||||||| |||||||    
T  18678161 ttttgagaaaatgacataattcaatataatcac 18678193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 60
Target Start/End: Complemental strand, 35917425 - 35917393
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcaca 60  Q
    ||||||||||||| |||||||||||||||||||    
T  35917425 tttgagaaaatgatataattcaatgtaatcaca 35917393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 66
Target Start/End: Complemental strand, 44317325 - 44317293
Alignment:
Q  34 aaaatgacataattcaatgtaatcacaagtgtc 66  Q
    ||||||||||||||||||||||||| |||||||    
T  44317325 aaaatgacataattcaatgtaatcataagtgtc 44317293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 27 - 77
Target Start/End: Original strand, 42874535 - 42874585
Alignment:
Q  27 ttttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 77  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  42874535 ttttgagaaaatgacataattcaatgtaatcacaagtgtcagtgttggaca 42874585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 67
Target Start/End: Original strand, 31119100 - 31119140
Alignment:
Q  27 ttttgagaaaatgacataattcaatgtaatcacaagtgtcg 67  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  31119100 ttttgagaaaatgacataattcaatgtaatcacaagtgtcg 31119140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 27733860 - 27733905
Alignment:
Q  27 ttttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtc 72  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||    
T  27733860 ttttgagaaaatgatataattcaatgtaatcacaagtgttggtgtc 27733905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 18170527 - 18170475
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacatat 80  Q
    ||||| ||||| ||||||||||||||||| |||| ||||||||||||||||||    
T  18170527 tttgaaaaaattacataattcaatgtaattacaaatgtcggtgtcggacatat 18170475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 18634095 - 18634043
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacatat 80  Q
    ||||| ||||| ||||||||||||||||| |||| ||||||||||||||||||    
T  18634095 tttgaaaaaattacataattcaatgtaattacaaatgtcggtgtcggacatat 18634043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 26915286 - 26915246
Alignment:
Q  27 ttttgagaaaatgacataattcaatgtaatcacaagtgtcg 67  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  26915286 ttttgagaaaatgacataatttaatgtaatcacaagtgtcg 26915246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 31548338 - 31548294
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtc 72  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||    
T  31548338 tttgataaaatgacataattcaatgtaatcacatgtgtcggtgtc 31548294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 30 - 72
Target Start/End: Complemental strand, 24295180 - 24295138
Alignment:
Q  30 tgagaaaatgacataattcaatgtaatcacaagtgtcggtgtc 72  Q
    ||||||||||||| |||| ||||||||||||||||||||||||    
T  24295180 tgagaaaatgacacaatttaatgtaatcacaagtgtcggtgtc 24295138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 1433359 - 1433408
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 77  Q
    ||||||||||||||||||| ||||||||| ||| | ||||||||||||||    
T  1433359 tttgagaaaatgacataatccaatgtaataacatgcgtcggtgtcggaca 1433408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 4948666 - 4948715
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 77  Q
    ||||| ||||| |||||||||| |||||| ||||||||||||||||||||    
T  4948666 tttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggaca 4948715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 12985406 - 12985455
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 77  Q
    ||||||||||| ||||||||||||||||||| |  |||||||||||||||    
T  12985406 tttgagaaaatcacataattcaatgtaatcatatatgtcggtgtcggaca 12985455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 40332205 - 40332254
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 77  Q
    ||||||||||| |||||||||| |||||| |||||||||||||| |||||    
T  40332205 tttgagaaaatcacataattcagtgtaattacaagtgtcggtgtgggaca 40332254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 29447155 - 29447111
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtc 72  Q
    ||||||||||| ||||||||||||||||  |||||||||||||||    
T  29447155 tttgagaaaatcacataattcaatgtaactacaagtgtcggtgtc 29447111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 78
Target Start/End: Complemental strand, 3954426 - 3954375
Alignment:
Q  27 ttttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacat 78  Q
    ||||||||||||||| || |||||| |||||||| ||||| |||||||||||    
T  3954426 ttttgagaaaatgacgtatttcaatttaatcacatgtgtccgtgtcggacat 3954375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 73
Target Start/End: Original strand, 5307080 - 5307119
Alignment:
Q  34 aaaatgacataattcaatgtaatcacaagtgtcggtgtcg 73  Q
    ||||||||||||||||||| ||||| ||||||||||||||    
T  5307080 aaaatgacataattcaatgaaatcataagtgtcggtgtcg 5307119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 73
Target Start/End: Complemental strand, 10002202 - 10002163
Alignment:
Q  34 aaaatgacataattcaatgtaatcacaagtgtcggtgtcg 73  Q
    |||||||||||||| |||||||||||| ||||||||||||    
T  10002202 aaaatgacataatttaatgtaatcacatgtgtcggtgtcg 10002163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 78
Target Start/End: Original strand, 24669447 - 24669497
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacat 78  Q
    |||||| |||| |||||||||| |||||| |||||||||||||||| ||||    
T  24669447 tttgaggaaattacataattcagtgtaattacaagtgtcggtgtcgaacat 24669497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 58
Target Start/End: Complemental strand, 29198524 - 29198494
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatca 58  Q
    |||||||||||||||||||||||||||||||    
T  29198524 tttgagaaaatgacataattcaatgtaatca 29198494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 56
Target Start/End: Original strand, 1639503 - 1639532
Alignment:
Q  27 ttttgagaaaatgacataattcaatgtaat 56  Q
    ||||||||||||||||||||||||||||||    
T  1639503 ttttgagaaaatgacataattcaatgtaat 1639532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 20873083 - 20873132
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 77  Q
    ||||| ||||| |||||||| | |||||| ||||||||||||||||||||    
T  20873083 tttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcggaca 20873132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 73
Target Start/End: Original strand, 22651990 - 22652035
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcg 73  Q
    ||||| ||||| |||||||||||| |||| ||||||||||||||||    
T  22651990 tttgaaaaaatcacataattcaatataattacaagtgtcggtgtcg 22652035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 73
Target Start/End: Original strand, 25566855 - 25566900
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcg 73  Q
    ||||| ||||| |||||||||| |||||| ||||||||||||||||    
T  25566855 tttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 25566900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 26434194 - 26434243
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 77  Q
    ||||||||||| |||||||||||| |||| | |||||||||||| |||||    
T  26434194 tttgagaaaatcacataattcaatataattaaaagtgtcggtgttggaca 26434243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 31236622 - 31236573
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 77  Q
    ||||||||||| ||||||||||||||||| | | ||||||||| ||||||    
T  31236622 tttgagaaaatcacataattcaatgtaattatatgtgtcggtgacggaca 31236573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 73
Target Start/End: Complemental strand, 31681871 - 31681830
Alignment:
Q  32 agaaaatgacataattcaatgtaatcacaagtgtcggtgtcg 73  Q
    |||||||||||||||| |||| ||||||| ||||||||||||    
T  31681871 agaaaatgacataattgaatgaaatcacatgtgtcggtgtcg 31681830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 55
Target Start/End: Original strand, 1591312 - 1591340
Alignment:
Q  27 ttttgagaaaatgacataattcaatgtaa 55  Q
    |||||||||||||||||||||||||||||    
T  1591312 ttttgagaaaatgacataattcaatgtaa 1591340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 67
Target Start/End: Original strand, 2652352 - 2652391
Alignment:
Q  27 ttttgagaaaatgacataattcaatgtaatcacaagtgtcg 67  Q
    |||| |||||||||||||||| |||||||||||||||||||    
T  2652352 tttttagaaaatgacataatt-aatgtaatcacaagtgtcg 2652391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 4298931 - 4298887
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtc 72  Q
    ||||| ||||| |||||||| |||||||| |||||||||||||||    
T  4298931 tttgaaaaaatcacataatttaatgtaattacaagtgtcggtgtc 4298887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 56
Target Start/End: Original strand, 10441217 - 10441245
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaat 56  Q
    |||||||||||||||||||||||||||||    
T  10441217 tttgagaaaatgacataattcaatgtaat 10441245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 64
Target Start/End: Original strand, 22600547 - 22600579
Alignment:
Q  32 agaaaatgacataattcaatgtaatcacaagtg 64  Q
    |||||||||||||||||||| ||||||||||||    
T  22600547 agaaaatgacataattcaatataatcacaagtg 22600579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 31586322 - 31586278
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtc 72  Q
    ||||||||||||| |||||  |||||||||||| |||||||||||    
T  31586322 tttgagaaaatgatataatataatgtaatcacacgtgtcggtgtc 31586278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 34074024 - 34073984
Alignment:
Q  27 ttttgagaaaatgacataattcaatgtaatcacaagtgtcg 67  Q
    |||||| |||||||||||||| |||||||||| ||||||||    
T  34074024 ttttgaaaaaatgacataatttaatgtaatcataagtgtcg 34073984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 56
Target Start/End: Complemental strand, 34201091 - 34201063
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaat 56  Q
    |||||||||||||||||||||||||||||    
T  34201091 tttgagaaaatgacataattcaatgtaat 34201063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0314 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0314
Description:

Target: scaffold0314; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 8961 - 9006
Alignment:
Q  27 ttttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtc 72  Q
    |||||||||||||||||||||||| |||||||||||||||||||||    
T  8961 ttttgagaaaatgacataattcaacgtaatcacaagtgtcggtgtc 9006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 30080547 - 30080503
Alignment:
Q  27 ttttgagaaaatgacataattcaatgtaatcacaagtgtcggtgt 71  Q
    ||||||||||||||||||||||||||||||||||||| |||||||    
T  30080547 ttttgagaaaatgacataattcaatgtaatcacaagtatcggtgt 30080503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 28 - 76
Target Start/End: Original strand, 8420041 - 8420089
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggac 76  Q
    ||||| ||||| ||||||||||||||||| |||||||||||||||||||    
T  8420041 tttgaaaaaataacataattcaatgtaattacaagtgtcggtgtcggac 8420089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 78
Target Start/End: Original strand, 10010567 - 10010618
Alignment:
Q  27 ttttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacat 78  Q
    |||||| |||||||||||||||| |||||||||| |||||||||| ||||||    
T  10010567 ttttgaaaaaatgacataattcattgtaatcacatgtgtcggtgtgggacat 10010618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 77
Target Start/End: Complemental strand, 19167615 - 19167572
Alignment:
Q  34 aaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 77  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||    
T  19167615 aaaatgacacaattcaatgtaatcacaagtgtcggtgtcagaca 19167572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 77
Target Start/End: Original strand, 2548404 - 2548450
Alignment:
Q  31 gagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 77  Q
    |||||||| |||||||||| |||||||| ||||||||||||||||||    
T  2548404 gagaaaattacataattcagtgtaatcataagtgtcggtgtcggaca 2548450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 30 - 72
Target Start/End: Original strand, 10009842 - 10009884
Alignment:
Q  30 tgagaaaatgacataattcaatgtaatcacaagtgtcggtgtc 72  Q
    ||||||||||||||||||||||||||||||| |||||| ||||    
T  10009842 tgagaaaatgacataattcaatgtaatcacatgtgtcgttgtc 10009884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 77
Target Start/End: Complemental strand, 16207633 - 16207587
Alignment:
Q  31 gagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 77  Q
    |||||| |||||||||||||||||||||||||||| |||||| ||||    
T  16207633 gagaaattgacataattcaatgtaatcacaagtgttggtgtcagaca 16207587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 28 - 78
Target Start/End: Complemental strand, 24906346 - 24906296
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacat 78  Q
    ||||| |||||||||||||||| |||||| |||||||||||| ||||||||    
T  24906346 tttgaaaaaatgacataattcagtgtaattacaagtgtcggtatcggacat 24906296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 6247636 - 6247685
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 77  Q
    ||||| ||||| |||||||||| |||||| ||||||||||||||||||||    
T  6247636 tttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggaca 6247685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 21191101 - 21191052
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 77  Q
    ||||| ||||| |||||||||| |||||| ||||||||||||||||||||    
T  21191101 tttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggaca 21191052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 21319991 - 21319946
Alignment:
Q  27 ttttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtc 72  Q
    |||||| ||||||| |||||||||||||||||||||||||| ||||    
T  21319991 ttttgaaaaaatgatataattcaatgtaatcacaagtgtcgatgtc 21319946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 73
Target Start/End: Original strand, 32444780 - 32444825
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcg 73  Q
    |||||||| |||||||||||||||||||||| | ||||||||||||    
T  32444780 tttgagaagatgacataattcaatgtaatcaaatgtgtcggtgtcg 32444825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 74
Target Start/End: Original strand, 15294944 - 15294991
Alignment:
Q  27 ttttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcgg 74  Q
    |||||| ||||||||||||||||| ||||||||||||| |||| ||||    
T  15294944 ttttgaaaaaatgacataattcaaggtaatcacaagtgccggtttcgg 15294991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 77
Target Start/End: Original strand, 15884008 - 15884051
Alignment:
Q  34 aaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 77  Q
    ||||| |||||||||| |||||| ||||||||||||||||||||    
T  15884008 aaaatcacataattcagtgtaattacaagtgtcggtgtcggaca 15884051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 31264452 - 31264491
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcg 67  Q
    |||||||||||||||||||||| |||||||| ||||||||    
T  31264452 tttgagaaaatgacataattcagtgtaatcataagtgtcg 31264491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 58
Target Start/End: Complemental strand, 11596500 - 11596470
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatca 58  Q
    |||||||||||||||||||||||||||||||    
T  11596500 tttgagaaaatgacataattcaatgtaatca 11596470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 58
Target Start/End: Complemental strand, 43208319 - 43208289
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatca 58  Q
    |||||||||||||||||||||||||||||||    
T  43208319 tttgagaaaatgacataattcaatgtaatca 43208289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 4445154 - 4445203
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 77  Q
    |||| |||||||||  |||| |||| ||||||||||||||||||||||||    
T  4445154 tttgtgaaaatgaccaaatttaatgcaatcacaagtgtcggtgtcggaca 4445203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 6326342 - 6326293
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 77  Q
    ||||||||||| |||||||||| |||||| ||||||||| | ||||||||    
T  6326342 tttgagaaaattacataattcagtgtaattacaagtgtcagcgtcggaca 6326293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 73
Target Start/End: Original strand, 28296342 - 28296387
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcg 73  Q
    ||||||||||||||||||||||||||| ||| | |||| |||||||    
T  28296342 tttgagaaaatgacataattcaatgtactcatatgtgttggtgtcg 28296387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 28588719 - 28588670
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 77  Q
    ||||||||||| |||||||||| |||||| | | ||||||||||||||||    
T  28588719 tttgagaaaatcacataattcagtgtaattataggtgtcggtgtcggaca 28588670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 73
Target Start/End: Original strand, 31084337 - 31084382
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcg 73  Q
    ||||| ||||| ||||||||||||||||| |||||||||| |||||    
T  31084337 tttgaaaaaatcacataattcaatgtaattacaagtgtcgatgtcg 31084382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 41558699 - 41558654
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcg 73  Q
    ||||||||||||||||||||||||||||| | | ||||| ||||||    
T  41558699 tttgagaaaatgacataattcaatgtaattaaatgtgtcagtgtcg 41558654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 60
Target Start/End: Original strand, 42192289 - 42192322
Alignment:
Q  27 ttttgagaaaatgacataattcaatgtaatcaca 60  Q
    |||||||| |||||||||||||||||||||||||    
T  42192289 ttttgagacaatgacataattcaatgtaatcaca 42192322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 26205806 - 26205766
Alignment:
Q  27 ttttgagaaaatgacataattcaatgtaatcacaagtgtcg 67  Q
    ||||||||||||||||||||||| |||||||| | ||||||    
T  26205806 ttttgagaaaatgacataattcagtgtaatcataggtgtcg 26205766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 66
Target Start/End: Original strand, 38784826 - 38784858
Alignment:
Q  34 aaaatgacataattcaatgtaatcacaagtgtc 66  Q
    ||||||| |||||||||||||||||||||||||    
T  38784826 aaaatgatataattcaatgtaatcacaagtgtc 38784858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 27 - 77
Target Start/End: Complemental strand, 14338529 - 14338479
Alignment:
Q  27 ttttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 77  Q
    |||||| |||||||||||||||||||||||||||| |||||||||| ||||    
T  14338529 ttttgaaaaaatgacataattcaatgtaatcacaaatgtcggtgtcagaca 14338479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 27 - 73
Target Start/End: Complemental strand, 49179761 - 49179715
Alignment:
Q  27 ttttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcg 73  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||||    
T  49179761 ttttgagaaagtgacataattcgatgtaatcacaagtgtcggtgtcg 49179715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 10954966 - 10955015
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 77  Q
    ||||| ||||| |||||||||| |||||||||||||||||||||||||||    
T  10954966 tttgaaaaaatcacataattcagtgtaatcacaagtgtcggtgtcggaca 10955015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 73
Target Start/End: Original strand, 44427855 - 44427900
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcg 73  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||    
T  44427855 tttgagaaaatgacataatccaatgtaatcacatgtgtcggtgtcg 44427900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 27 - 77
Target Start/End: Original strand, 6984777 - 6984827
Alignment:
Q  27 ttttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 77  Q
    |||||||||||| ||| |||||||| |||||||||| ||||||||||||||    
T  6984777 ttttgagaaaataacacaattcaatataatcacaagagtcggtgtcggaca 6984827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 28 - 78
Target Start/End: Complemental strand, 40150616 - 40150566
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacat 78  Q
    ||||||||||||| ||||||||||||||||| | ||||||||||| |||||    
T  40150616 tttgagaaaatgatataattcaatgtaatcatatgtgtcggtgtctgacat 40150566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 20503479 - 20503528
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 77  Q
    ||||| |||||||||||||||| |||||| |||||||||||||| |||||    
T  20503479 tttgaaaaaatgacataattcagtgtaattacaagtgtcggtgttggaca 20503528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 20691333 - 20691382
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 77  Q
    |||||||||||||||||||||| |||||||| | ||||||||||| ||||    
T  20691333 tttgagaaaatgacataattcagtgtaatcatatgtgtcggtgtcagaca 20691382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 27858354 - 27858403
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 77  Q
    |||||||||||||| ||||| |||||||||||| | ||||||||||||||    
T  27858354 tttgagaaaatgacctaattgaatgtaatcacaggcgtcggtgtcggaca 27858403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 78
Target Start/End: Original strand, 35222951 - 35223002
Alignment:
Q  27 ttttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacat 78  Q
    |||| ||||||| ||||||||||||||||| | | |||||||||||||||||    
T  35222951 tttttagaaaatcacataattcaatgtaattatatgtgtcggtgtcggacat 35223002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 78
Target Start/End: Complemental strand, 8587066 - 8587016
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacat 78  Q
    ||||| ||||| |||||||| | |||||| |||||||||||||||||||||    
T  8587066 tttgaaaaaatcacataattaagtgtaattacaagtgtcggtgtcggacat 8587016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 66
Target Start/End: Complemental strand, 9210870 - 9210832
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtc 66  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  9210870 tttgagaaaatgacataattcaatggaatcacatgtgtc 9210832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 73
Target Start/End: Original strand, 15864258 - 15864304
Alignment:
Q  27 ttttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcg 73  Q
    ||||||||||||||||||||||||| ||||||  ||||| |||||||    
T  15864258 ttttgagaaaatgacataattcaatataatcattagtgttggtgtcg 15864304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 77
Target Start/End: Original strand, 1502592 - 1502637
Alignment:
Q  32 agaaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 77  Q
    |||||||||||||||| |||||||||||| ||||| |||| |||||    
T  1502592 agaaaatgacataattgaatgtaatcacatgtgtctgtgttggaca 1502637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 4991012 - 4990967
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcg 73  Q
    ||||||||||| |||||||||| |||||| ||||||||||| ||||    
T  4991012 tttgagaaaattacataattcagtgtaattacaagtgtcggcgtcg 4990967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 8383271 - 8383320
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 77  Q
    ||||||||||| | |||||||| |||||| | ||||||||||||||||||    
T  8383271 tttgagaaaatcatataattcagtgtaattataagtgtcggtgtcggaca 8383320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 21149081 - 21149130
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 77  Q
    |||||||||||||||||||||| |||||||| |  ||||| |||||||||    
T  21149081 tttgagaaaatgacataattcagtgtaatcaaagatgtcgttgtcggaca 21149130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 77
Target Start/End: Original strand, 25775535 - 25775572
Alignment:
Q  40 acataattcaatgtaatcacaagtgtcggtgtcggaca 77  Q
    |||||||||| |||||| ||||||||||||||||||||    
T  25775535 acataattcagtgtaattacaagtgtcggtgtcggaca 25775572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 73
Target Start/End: Original strand, 28918015 - 28918060
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcg 73  Q
    ||||| ||||| |||||||||| |||||| ||||||||||||||||    
T  28918015 tttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 28918060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 60
Target Start/End: Complemental strand, 34409384 - 34409355
Alignment:
Q  31 gagaaaatgacataattcaatgtaatcaca 60  Q
    ||||||||||||||||||||||||||||||    
T  34409384 gagaaaatgacataattcaatgtaatcaca 34409355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 49651831 - 49651786
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcg 73  Q
    ||||| ||||| |||||||||| |||||| ||||||||||||||||    
T  49651831 tttgaaaaaatcacataattcactgtaattacaagtgtcggtgtcg 49651786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 51206398 - 51206349
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 77  Q
    ||||| ||||| |||||||||| |||||  ||||||||||||||||||||    
T  51206398 tttgaaaaaatcacataattcagtgtaaatacaagtgtcggtgtcggaca 51206349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 55401089 - 55401138
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 77  Q
    ||||| ||||| |||||||| | |||||| ||||||||||||||||||||    
T  55401089 tttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcggaca 55401138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 78
Target Start/End: Original strand, 8593157 - 8593201
Alignment:
Q  34 aaaatgacataattcaatgtaatcacaagtgtcggtgtcggacat 78  Q
    ||||| |||||||||| | |||| |||||||||||||||||||||    
T  8593157 aaaatcacataattcagtataattacaagtgtcggtgtcggacat 8593201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 56
Target Start/End: Complemental strand, 40017414 - 40017386
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaat 56  Q
    |||||||||||||||||||||||||||||    
T  40017414 tttgagaaaatgacataattcaatgtaat 40017386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 74
Target Start/End: Complemental strand, 40697901 - 40697857
Alignment:
Q  30 tgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcgg 74  Q
    |||||||||||||||||||||| ||| || | |||||||||||||    
T  40697901 tgagaaaatgacataattcaatctaaccatatgtgtcggtgtcgg 40697857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 60
Target Start/End: Complemental strand, 52558173 - 52558141
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcaca 60  Q
    |||||||||| ||||||||||||||||||||||    
T  52558173 tttgagaaaaggacataattcaatgtaatcaca 52558141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000001; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 38078706 - 38078657
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 77  Q
    ||||| ||||| ||||||||||||||||| ||||||||||||||||||||    
T  38078706 tttgaaaaaatcacataattcaatgtaattacaagtgtcggtgtcggaca 38078657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 31667443 - 31667487
Alignment:
Q  32 agaaaatgacataattcaatgtaatcacaagtgtcggtgtcggac 76  Q
    |||||||||||||||| |||||||||||| |||||||||||||||    
T  31667443 agaaaatgacataattaaatgtaatcacatgtgtcggtgtcggac 31667487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 71
Target Start/End: Original strand, 14332422 - 14332465
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgt 71  Q
    |||||||||||||||||||||||||||||||||  |||||||||    
T  14332422 tttgagaaaatgacataattcaatgtaatcacatatgtcggtgt 14332465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 77
Target Start/End: Complemental strand, 50195504 - 50195461
Alignment:
Q  34 aaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 77  Q
    |||||||||||||| |||||||||||| ||||||||||||||||    
T  50195504 aaaatgacataattgaatgtaatcacatgtgtcggtgtcggaca 50195461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 27 - 65
Target Start/End: Complemental strand, 18946080 - 18946042
Alignment:
Q  27 ttttgagaaaatgacataattcaatgtaatcacaagtgt 65  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  18946080 ttttgagaaaatgacataattcaatgtaatcacgagtgt 18946042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 27 - 73
Target Start/End: Complemental strand, 24462316 - 24462270
Alignment:
Q  27 ttttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcg 73  Q
    |||||| |||||||||||||||||||||||||||||| || ||||||    
T  24462316 ttttgaaaaaatgacataattcaatgtaatcacaagtttcagtgtcg 24462270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 77
Target Start/End: Complemental strand, 7988492 - 7988447
Alignment:
Q  32 agaaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 77  Q
    ||||| ||||||||||||||||||||| |||||| |||||||||||    
T  7988492 agaaagtgacataattcaatgtaatcataagtgttggtgtcggaca 7988447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 18337343 - 18337392
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 77  Q
    ||||| ||||| |||||||||| |||||| ||||||||||||||||||||    
T  18337343 tttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggaca 18337392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 77
Target Start/End: Original strand, 19637786 - 19637831
Alignment:
Q  32 agaaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 77  Q
    |||||||||||| |||||||||||||| | ||||||||||||||||    
T  19637786 agaaaatgacattattcaatgtaatcatatgtgtcggtgtcggaca 19637831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 41877515 - 41877466
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 77  Q
    ||||||||||| |||||||| | |||||| ||||||||||||||||||||    
T  41877515 tttgagaaaattacataatttagtgtaattacaagtgtcggtgtcggaca 41877466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 75
Target Start/End: Original strand, 43966819 - 43966867
Alignment:
Q  27 ttttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcgga 75  Q
    |||||||||||||| | ||||||||||||||||| |||| |||||||||    
T  43966819 ttttgagaaaatgatacaattcaatgtaatcacatgtgttggtgtcgga 43966867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 74
Target Start/End: Original strand, 7888108 - 7888155
Alignment:
Q  27 ttttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcgg 74  Q
    |||||||||| |  ||||||| ||||||||||||||||||||||||||    
T  7888108 ttttgagaaactcgcataatttaatgtaatcacaagtgtcggtgtcgg 7888155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 77
Target Start/End: Complemental strand, 11412811 - 11412764
Alignment:
Q  30 tgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 77  Q
    |||||||||||||||||||||||| |||| | |||||||||| |||||    
T  11412811 tgagaaaatgacataattcaatgtgatcataggtgtcggtgttggaca 11412764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 77
Target Start/End: Complemental strand, 17008000 - 17007957
Alignment:
Q  34 aaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 77  Q
    ||||| |||||||||||| |||||||||||||| ||||||||||    
T  17008000 aaaattacataattcaatataatcacaagtgtcagtgtcggaca 17007957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 73
Target Start/End: Complemental strand, 26390172 - 26390133
Alignment:
Q  34 aaaatgacataattcaatgtaatcacaagtgtcggtgtcg 73  Q
    |||||||||||||| |||||||||||||||||| ||||||    
T  26390172 aaaatgacataattgaatgtaatcacaagtgtcagtgtcg 26390133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 77
Target Start/End: Original strand, 51410045 - 51410088
Alignment:
Q  34 aaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 77  Q
    ||||| |||||||||| |||||| ||||||||||||||||||||    
T  51410045 aaaatcacataattcagtgtaattacaagtgtcggtgtcggaca 51410088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 58
Target Start/End: Original strand, 3921681 - 3921711
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatca 58  Q
    |||||||||||||||||||||||||||||||    
T  3921681 tttgagaaaatgacataattcaatgtaatca 3921711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 72
Target Start/End: Original strand, 28170401 - 28170439
Alignment:
Q  34 aaaatgacataattcaatgtaatcacaagtgtcggtgtc 72  Q
    ||||||||||||||||||||||| ||||||||| |||||    
T  28170401 aaaatgacataattcaatgtaataacaagtgtcagtgtc 28170439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 73
Target Start/End: Original strand, 40176616 - 40176662
Alignment:
Q  27 ttttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcg 73  Q
    ||||||||||||||| | |||||||||||||||| ||||| ||||||    
T  40176616 ttttgagaaaatgacttcattcaatgtaatcacatgtgtcagtgtcg 40176662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 69
Target Start/End: Complemental strand, 40686804 - 40686762
Alignment:
Q  27 ttttgagaaaatgacataattcaatgtaatcacaagtgtcggt 69  Q
    |||||| ||||||| ||||||||||||||||| ||||||||||    
T  40686804 ttttgataaaatgatataattcaatgtaatcataagtgtcggt 40686762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 6612216 - 6612171
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcg 73  Q
    ||||| ||||| |||||||||| |||||| ||||||||||||||||    
T  6612216 tttgaaaaaattacataattcagtgtaattacaagtgtcggtgtcg 6612171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 65
Target Start/End: Original strand, 8203835 - 8203872
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgt 65  Q
    |||||||||||||||||| | |||||||||||||||||    
T  8203835 tttgagaaaatgacataagtgaatgtaatcacaagtgt 8203872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 57
Target Start/End: Original strand, 11571599 - 11571628
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatc 57  Q
    ||||||||||||||||||||||||||||||    
T  11571599 tttgagaaaatgacataattcaatgtaatc 11571628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 77
Target Start/End: Complemental strand, 19058889 - 19058852
Alignment:
Q  40 acataattcaatgtaatcacaagtgtcggtgtcggaca 77  Q
    |||||||||| |||||| ||||||||||||||||||||    
T  19058889 acataattcagtgtaattacaagtgtcggtgtcggaca 19058852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 22515932 - 22515883
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 77  Q
    ||||| ||||| |||||||| | |||||| ||||||||||||||||||||    
T  22515932 tttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcggaca 22515883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 22881661 - 22881612
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 77  Q
    ||||| ||||| |||||||| | |||||| ||||||||||||||||||||    
T  22881661 tttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcggaca 22881612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 24577231 - 24577186
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcg 73  Q
    ||||| ||||| |||||||||| |||||| ||||||||||||||||    
T  24577231 tttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 24577186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 40258978 - 40258929
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 77  Q
    ||||| ||||| |||||||||| |||||| ||||||||||||||| ||||    
T  40258978 tttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcagaca 40258929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 42359494 - 42359445
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 77  Q
    ||||| ||||| ||| |||||| |||||| ||||||||||||||||||||    
T  42359494 tttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtcggaca 42359445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 2445884 - 2445928
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtc 72  Q
    |||||||||||||||||||||||| |||||| | |||||| ||||    
T  2445884 tttgagaaaatgacataattcaatttaatcatatgtgtcgatgtc 2445928  T

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Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 77
Target Start/End: Complemental strand, 24334737 - 24334701
Alignment:
Q  41 cataattcaatgtaatcacaagtgtcggtgtcggaca 77  Q
    ||||||||| |||||| ||||||||||||||||||||    
T  24334737 cataattcagtgtaattacaagtgtcggtgtcggaca 24334701  T

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Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 68
Target Start/End: Original strand, 31015057 - 31015097
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcgg 68  Q
    ||||||||||| |||||||||| |||||| |||||||||||    
T  31015057 tttgagaaaatcacataattcagtgtaattacaagtgtcgg 31015097  T

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Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 56
Target Start/End: Complemental strand, 40747818 - 40747790
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaat 56  Q
    |||||||||||||||||||||||||||||    
T  40747818 tttgagaaaatgacataattcaatgtaat 40747790  T

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Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 69
Target Start/End: Complemental strand, 46914087 - 46914043
Alignment:
Q  25 acttttgagaaaatgacataattcaatgtaatcacaagtgtcggt 69  Q
    |||||||||||||| ||||||||||||||||| | || |||||||    
T  46914087 acttttgagaaaataacataattcaatgtaattataaatgtcggt 46914043  T

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Target: scaffold0024 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 18154 - 18110
Alignment:
Q  27 ttttgagaaaatgacataattcaatgtaatcacaagtgtcggtgt 71  Q
    |||||||||||| |||||||||||||||||| ||||||| |||||    
T  18154 ttttgagaaaataacataattcaatgtaatcgcaagtgttggtgt 18110  T

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Target: scaffold0504 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 65
Target Start/End: Complemental strand, 8743 - 8705
Alignment:
Q  27 ttttgagaaaatgacataattcaatgtaatcacaagtgt 65  Q
    ||||||||||||||||| ||||||||||| |||||||||    
T  8743 ttttgagaaaatgacatgattcaatgtaaccacaagtgt 8705  T

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Target: scaffold0652 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 507 - 458
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 77  Q
    ||||| ||||| ||| |||||| |||||| ||||||||||||||||||||    
T  507 tttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtcggaca 458  T

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Target: scaffold0083 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 77
Target Start/End: Complemental strand, 45563 - 45526
Alignment:
Q  40 acataattcaatgtaatcacaagtgtcggtgtcggaca 77  Q
    |||||||||| |||||| ||||||||||||||||||||    
T  45563 acataattcagtgtaattacaagtgtcggtgtcggaca 45526  T

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Target: scaffold0050 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 70292 - 70341
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 77  Q
    ||||| ||||| |||||||||| |||||| | ||||||||||||||||||    
T  70292 tttgaaaaaataacataattcagtgtaattataagtgtcggtgtcggaca 70341  T

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Target: scaffold0049 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 73
Target Start/End: Original strand, 56936 - 56981
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcg 73  Q
    ||||||||||||| |||||||| |||||||| ||||||| ||||||    
T  56936 tttgagaaaatgatataattcagtgtaatcataagtgtcagtgtcg 56981  T

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Target: scaffold0049; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 63787 - 63836
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 77  Q
    ||||||||||| |||||||||| || ||| ||||||||||||||| ||||    
T  63787 tttgagaaaattacataattcagtgcaattacaagtgtcggtgtcagaca 63836  T

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Target: scaffold0571 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0571
Description:

Target: scaffold0571; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 7704 - 7736
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcaca 60  Q
    ||||||||||||||||||||||||| |||||||    
T  7704 tttgagaaaatgacataattcaatgcaatcaca 7736  T

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Target: scaffold0011 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 240066 - 240022
Alignment:
Q  28 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtc 72  Q
    ||||||||||| | ||||||||||||||||| | |||||||||||    
T  240066 tttgagaaaataatataattcaatgtaatcatatgtgtcggtgtc 240022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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