View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5256_low_33 (Length: 226)
Name: NF5256_low_33
Description: NF5256
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5256_low_33 |
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Alignment Details
Target: chr4 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 32686796 - 32687014
Alignment:
| Q |
1 |
tattaattgttatgttagtattttttccttcaccaggaatttccttgtttagttcacatagtcaaactgtgtcatttccttagtttacatctcaaacatc |
100 |
Q |
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| T |
32686796 |
tattaattgttatgttagtattttttccttcaccaggaatttccttgtttagttcacatagtcaaactgtgtcatttccttagtttacatctcaaacatc |
32686895 |
T |
|
| Q |
101 |
ttcttacggaatcattgatgctgattgattgagagaaacggagttgctccaataaccatatgtatcgtgaggcgaacaacagtgctgataagttagcaaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32686896 |
ttcttacggaatcattgatgctgattgattgagagaaacggagttgctccaataaccatatgtatcgtgaggcgaacaacagtgctgataagttagcaaa |
32686995 |
T |
|
| Q |
201 |
ccttggttatgatgatgtc |
219 |
Q |
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||||||||||||||||||| |
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| T |
32686996 |
ccttggttatgatgatgtc |
32687014 |
T |
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